Query 047662
Match_columns 301
No_of_seqs 198 out of 1857
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 13:23:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047662.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047662hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02207 UDP-glycosyltransfera 100.0 2.5E-56 5.4E-61 425.6 25.1 281 7-294 173-466 (468)
2 PLN02555 limonoid glucosyltran 100.0 1E-55 2.2E-60 422.9 25.3 287 9-296 174-472 (480)
3 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.5E-55 5.5E-60 418.4 24.4 274 9-293 167-450 (451)
4 PLN02562 UDP-glycosyltransfera 100.0 3.5E-55 7.5E-60 418.0 24.9 272 10-292 167-448 (448)
5 PLN02173 UDP-glucosyl transfer 100.0 7.2E-55 1.6E-59 414.0 24.2 277 9-292 154-447 (449)
6 PLN03015 UDP-glucosyl transfer 100.0 8.6E-55 1.9E-59 414.0 23.5 273 9-291 167-466 (470)
7 PLN02152 indole-3-acetate beta 100.0 1.2E-54 2.5E-59 413.2 24.2 282 9-291 155-454 (455)
8 PLN02992 coniferyl-alcohol glu 100.0 8.9E-55 1.9E-59 415.8 22.0 281 9-300 163-476 (481)
9 PLN03004 UDP-glycosyltransfera 100.0 2.1E-54 4.5E-59 411.1 20.8 269 8-282 170-450 (451)
10 PLN02863 UDP-glucoronosyl/UDP- 100.0 9E-54 1.9E-58 410.3 24.4 286 10-296 176-474 (477)
11 PLN00164 glucosyltransferase; 100.0 7.9E-54 1.7E-58 411.6 24.0 279 10-295 170-475 (480)
12 PLN02554 UDP-glycosyltransfera 100.0 9.5E-54 2.1E-58 411.9 23.6 279 9-295 174-480 (481)
13 PLN02167 UDP-glycosyltransfera 100.0 1.3E-53 2.9E-58 410.3 23.6 280 9-295 179-474 (475)
14 PLN02210 UDP-glucosyl transfer 100.0 1E-52 2.2E-57 401.6 24.7 278 9-292 161-454 (456)
15 PLN02764 glycosyltransferase f 100.0 2.5E-52 5.4E-57 395.9 24.5 276 11-297 156-449 (453)
16 PLN02208 glycosyltransferase f 100.0 6.6E-52 1.4E-56 394.0 22.4 270 10-294 154-440 (442)
17 PLN02534 UDP-glycosyltransfera 100.0 2.4E-51 5.3E-56 393.4 23.7 284 7-295 174-488 (491)
18 PLN02670 transferase, transfer 100.0 1.6E-50 3.5E-55 386.1 23.6 273 17-295 182-467 (472)
19 PLN02448 UDP-glycosyltransfera 100.0 2.3E-50 5E-55 386.8 24.3 274 9-294 171-458 (459)
20 PLN03007 UDP-glucosyltransfera 100.0 2.6E-50 5.7E-55 388.3 24.1 279 10-293 180-480 (482)
21 PLN00414 glycosyltransferase f 100.0 2.2E-50 4.8E-55 384.0 23.3 274 10-297 154-444 (446)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1.7E-44 3.6E-49 350.5 11.1 225 47-299 224-449 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 9.9E-42 2.1E-46 329.8 23.4 229 45-299 241-473 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 1.7E-37 3.7E-42 300.8 20.6 234 45-298 220-460 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 4.3E-28 9.3E-33 228.7 19.2 210 50-291 180-389 (392)
26 COG1819 Glycosyl transferases, 99.9 6.5E-27 1.4E-31 221.0 18.7 169 106-296 235-403 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 3.5E-25 7.7E-30 209.1 17.3 207 53-290 192-400 (401)
28 PRK12446 undecaprenyldiphospho 99.6 1.8E-15 3.9E-20 140.9 13.4 145 105-265 182-335 (352)
29 PF04101 Glyco_tran_28_C: Glyc 99.5 8.8E-16 1.9E-20 128.0 -3.1 139 110-259 1-147 (167)
30 COG0707 MurG UDP-N-acetylgluco 99.5 6.3E-13 1.4E-17 123.4 13.6 136 107-257 182-325 (357)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 8.8E-13 1.9E-17 120.7 12.5 161 47-253 152-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 1.3E-12 2.7E-17 120.3 10.0 127 108-260 188-318 (321)
33 PRK00726 murG undecaprenyldiph 99.2 9.8E-11 2.1E-15 108.9 11.9 96 168-269 237-337 (357)
34 cd03785 GT1_MurG MurG is an N- 99.2 7.9E-11 1.7E-15 108.9 11.0 149 106-265 179-333 (350)
35 PRK13608 diacylglycerol glucos 99.1 2.2E-09 4.8E-14 101.5 14.3 163 107-291 201-369 (391)
36 PLN02605 monogalactosyldiacylg 99.0 1.2E-08 2.5E-13 96.2 16.5 142 106-263 204-355 (382)
37 PRK13609 diacylglycerol glucos 99.0 6.4E-09 1.4E-13 97.6 13.7 141 107-265 201-347 (380)
38 TIGR01133 murG undecaprenyldip 98.9 2.2E-08 4.9E-13 92.4 12.7 85 175-265 243-330 (348)
39 TIGR03590 PseG pseudaminic aci 98.7 2.3E-08 4.9E-13 90.4 7.5 104 109-223 171-279 (279)
40 TIGR00215 lpxB lipid-A-disacch 98.7 3.7E-08 8E-13 93.0 9.2 171 106-288 189-383 (385)
41 PRK00025 lpxB lipid-A-disaccha 98.6 2E-07 4.4E-12 87.3 10.1 106 177-291 256-374 (380)
42 TIGR03492 conserved hypothetic 98.6 6.9E-07 1.5E-11 84.7 12.4 187 48-264 159-372 (396)
43 cd03814 GT1_like_2 This family 98.5 9.9E-06 2.2E-10 73.9 18.6 156 109-289 197-361 (364)
44 COG4671 Predicted glycosyl tra 98.4 6.3E-06 1.4E-10 75.0 12.9 185 49-257 167-366 (400)
45 KOG3349 Predicted glycosyltran 98.2 5.4E-06 1.2E-10 66.5 6.9 116 110-233 5-132 (170)
46 cd03801 GT1_YqgM_like This fam 98.1 0.00043 9.4E-09 62.3 18.3 87 165-263 255-348 (374)
47 cd03794 GT1_wbuB_like This fam 98.0 9.7E-05 2.1E-09 67.5 12.7 138 108-263 219-372 (394)
48 cd03798 GT1_wlbH_like This fam 98.0 0.0009 1.9E-08 60.5 18.5 190 45-259 144-347 (377)
49 cd03804 GT1_wbaZ_like This fam 98.0 0.0001 2.3E-09 68.0 12.2 135 111-265 197-336 (351)
50 cd04946 GT1_AmsK_like This fam 97.9 0.00033 7.2E-09 66.6 15.4 111 166-288 289-406 (407)
51 TIGR00236 wecB UDP-N-acetylglu 97.9 6.1E-05 1.3E-09 70.3 10.1 136 109-265 198-343 (365)
52 cd03823 GT1_ExpE7_like This fa 97.9 0.0005 1.1E-08 62.4 15.7 141 107-265 189-338 (359)
53 cd03820 GT1_amsD_like This fam 97.9 0.00072 1.6E-08 60.6 15.6 92 166-268 235-331 (348)
54 cd03786 GT1_UDP-GlcNAc_2-Epime 97.8 9.1E-05 2E-09 68.7 9.2 136 108-263 198-344 (363)
55 cd03795 GT1_like_4 This family 97.8 0.00038 8.2E-09 63.7 12.7 133 110-261 192-337 (357)
56 cd03822 GT1_ecORF704_like This 97.8 0.003 6.6E-08 57.5 18.5 87 165-262 246-340 (366)
57 PRK05749 3-deoxy-D-manno-octul 97.8 0.0011 2.4E-08 63.2 15.9 77 178-264 315-396 (425)
58 PRK15427 colanic acid biosynth 97.8 0.0012 2.6E-08 62.8 16.1 113 165-292 278-404 (406)
59 cd03817 GT1_UGDG_like This fam 97.7 0.00089 1.9E-08 60.9 14.3 131 109-260 202-347 (374)
60 cd05844 GT1_like_7 Glycosyltra 97.7 0.00067 1.5E-08 62.6 13.4 86 165-262 244-342 (367)
61 PRK15484 lipopolysaccharide 1, 97.7 0.0036 7.9E-08 58.9 18.2 112 165-291 256-375 (380)
62 cd03809 GT1_mtfB_like This fam 97.7 0.0027 5.9E-08 57.9 16.2 93 164-268 251-348 (365)
63 cd03807 GT1_WbnK_like This fam 97.6 0.0027 5.8E-08 57.4 15.9 107 166-289 251-362 (365)
64 cd03808 GT1_cap1E_like This fa 97.6 0.0028 6.2E-08 57.0 16.0 138 108-262 187-335 (359)
65 cd03799 GT1_amsK_like This is 97.6 0.0017 3.7E-08 59.3 14.4 85 165-259 235-330 (355)
66 cd03800 GT1_Sucrose_synthase T 97.6 0.0024 5.3E-08 59.4 15.6 85 166-262 283-374 (398)
67 cd03825 GT1_wcfI_like This fam 97.6 0.0054 1.2E-07 56.2 17.5 84 165-260 243-334 (365)
68 cd03821 GT1_Bme6_like This fam 97.6 0.0025 5.5E-08 57.8 15.1 85 165-263 261-352 (375)
69 PLN02871 UDP-sulfoquinovose:DA 97.6 0.0035 7.6E-08 60.6 16.3 131 110-262 264-406 (465)
70 cd03818 GT1_ExpC_like This fam 97.6 0.0055 1.2E-07 57.8 17.2 87 166-262 281-372 (396)
71 PF00534 Glycos_transf_1: Glyc 97.6 0.00046 1E-08 56.9 8.7 143 107-265 13-167 (172)
72 PF13844 Glyco_transf_41: Glyc 97.5 0.00083 1.8E-08 64.5 11.2 142 107-263 283-437 (468)
73 cd04951 GT1_WbdM_like This fam 97.5 0.0032 7E-08 57.6 14.0 86 166-265 245-336 (360)
74 cd03811 GT1_WabH_like This fam 97.4 0.0083 1.8E-07 53.7 15.9 91 165-265 245-341 (353)
75 cd04962 GT1_like_5 This family 97.4 0.0067 1.5E-07 56.0 15.4 111 166-291 253-368 (371)
76 TIGR03088 stp2 sugar transfera 97.4 0.0072 1.6E-07 56.2 15.5 111 166-291 255-370 (374)
77 PRK10307 putative glycosyl tra 97.4 0.0086 1.9E-07 56.7 16.2 115 166-293 284-407 (412)
78 PRK09922 UDP-D-galactose:(gluc 97.4 0.0029 6.3E-08 58.8 12.5 130 110-258 181-326 (359)
79 COG3980 spsG Spore coat polysa 97.4 0.0013 2.9E-08 58.4 9.4 143 110-268 160-305 (318)
80 TIGR03449 mycothiol_MshA UDP-N 97.3 0.0076 1.6E-07 56.8 15.1 87 165-263 282-375 (405)
81 TIGR02149 glgA_Coryne glycogen 97.3 0.006 1.3E-07 56.9 14.1 140 110-262 202-358 (388)
82 PF13692 Glyco_trans_1_4: Glyc 97.2 0.0011 2.4E-08 52.3 7.1 127 110-256 3-135 (135)
83 COG1519 KdtA 3-deoxy-D-manno-o 97.1 0.026 5.7E-07 53.1 15.9 67 188-263 327-393 (419)
84 TIGR03087 stp1 sugar transfera 97.1 0.019 4E-07 54.2 15.4 85 166-262 280-368 (397)
85 PRK14089 ipid-A-disaccharide s 97.1 0.0027 5.9E-08 59.1 9.0 72 177-252 230-315 (347)
86 PRK09814 beta-1,6-galactofuran 97.1 0.0025 5.5E-08 58.9 8.7 108 165-289 206-331 (333)
87 COG5017 Uncharacterized conser 97.1 0.0047 1E-07 49.0 8.4 108 111-234 2-122 (161)
88 cd03805 GT1_ALG2_like This fam 97.0 0.01 2.3E-07 55.3 12.3 84 165-261 279-369 (392)
89 cd04950 GT1_like_1 Glycosyltra 97.0 0.016 3.5E-07 54.3 13.5 183 44-257 148-341 (373)
90 cd03796 GT1_PIG-A_like This fa 97.0 0.029 6.3E-07 52.9 15.3 79 165-257 249-334 (398)
91 cd04949 GT1_gtfA_like This fam 96.9 0.011 2.4E-07 54.8 11.8 86 165-259 260-348 (372)
92 TIGR02472 sucr_P_syn_N sucrose 96.9 0.021 4.6E-07 54.8 13.8 86 165-260 316-410 (439)
93 PF02350 Epimerase_2: UDP-N-ac 96.9 0.002 4.4E-08 60.0 6.6 208 50-288 123-345 (346)
94 cd03792 GT1_Trehalose_phosphor 96.9 0.03 6.4E-07 52.2 14.3 109 166-291 252-369 (372)
95 cd03819 GT1_WavL_like This fam 96.9 0.046 1E-06 49.9 15.3 139 108-259 184-334 (355)
96 cd03816 GT1_ALG1_like This fam 96.9 0.023 4.9E-07 54.2 13.4 76 167-256 295-381 (415)
97 cd04955 GT1_like_6 This family 96.8 0.022 4.8E-07 52.1 12.8 107 165-290 247-361 (363)
98 cd03812 GT1_CapH_like This fam 96.8 0.019 4.2E-07 52.5 12.4 90 165-267 248-342 (358)
99 cd03813 GT1_like_3 This family 96.7 0.1 2.3E-06 50.6 17.0 88 165-263 353-449 (475)
100 cd03802 GT1_AviGT4_like This f 96.7 0.02 4.3E-07 51.8 11.2 152 110-289 172-332 (335)
101 TIGR02918 accessory Sec system 96.5 0.058 1.3E-06 52.8 13.8 95 166-266 376-480 (500)
102 PRK15179 Vi polysaccharide bio 96.2 0.18 3.9E-06 51.3 15.3 93 165-267 573-674 (694)
103 TIGR02468 sucrsPsyn_pln sucros 96.2 0.16 3.4E-06 53.6 15.1 115 165-293 547-670 (1050)
104 KOG4626 O-linked N-acetylgluco 96.1 0.039 8.4E-07 54.2 9.4 139 107-259 757-907 (966)
105 PF13524 Glyco_trans_1_2: Glyc 96.1 0.068 1.5E-06 39.3 8.9 82 191-288 9-91 (92)
106 PRK15490 Vi polysaccharide bio 95.8 0.21 4.5E-06 49.4 13.4 113 165-292 454-574 (578)
107 PHA01630 putative group 1 glyc 95.7 0.35 7.5E-06 44.8 13.7 109 173-291 197-328 (331)
108 TIGR03713 acc_sec_asp1 accesso 95.6 0.16 3.5E-06 49.9 11.8 80 166-262 409-494 (519)
109 cd03791 GT1_Glycogen_synthase_ 95.4 0.31 6.7E-06 47.0 12.9 83 165-255 350-441 (476)
110 PLN02275 transferase, transfer 95.3 0.072 1.6E-06 49.9 8.2 75 166-254 286-371 (371)
111 PRK14098 glycogen synthase; Pr 95.3 0.32 6.8E-06 47.6 12.8 81 164-254 360-449 (489)
112 PHA01633 putative glycosyl tra 95.2 0.84 1.8E-05 42.4 14.5 84 165-255 200-306 (335)
113 TIGR03568 NeuC_NnaA UDP-N-acet 95.1 0.23 5E-06 46.6 10.8 134 108-261 201-343 (365)
114 PRK01021 lpxB lipid-A-disaccha 95.1 0.2 4.3E-06 49.8 10.5 220 50-288 362-603 (608)
115 PF02684 LpxB: Lipid-A-disacch 95.1 0.23 5E-06 46.7 10.5 106 176-284 254-368 (373)
116 TIGR02095 glgA glycogen/starch 94.8 0.45 9.9E-06 46.0 12.2 132 110-255 292-436 (473)
117 PRK10017 colanic acid biosynth 94.7 0.29 6.3E-06 46.9 10.3 177 100-292 226-423 (426)
118 PF06722 DUF1205: Protein of u 94.0 0.072 1.6E-06 40.1 3.8 51 97-147 29-84 (97)
119 PRK00654 glgA glycogen synthas 93.8 1.1 2.4E-05 43.4 12.5 83 165-255 336-427 (466)
120 PF04007 DUF354: Protein of un 93.6 1.8 3.9E-05 40.2 12.9 138 94-254 166-308 (335)
121 COG0381 WecB UDP-N-acetylgluco 93.5 0.56 1.2E-05 43.9 9.3 107 167-292 263-372 (383)
122 PLN02949 transferase, transfer 93.3 0.57 1.2E-05 45.5 9.5 79 165-256 334-422 (463)
123 cd03806 GT1_ALG11_like This fa 92.7 0.32 7E-06 46.4 6.9 79 165-257 304-393 (419)
124 PRK10125 putative glycosyl tra 92.5 2.4 5.2E-05 40.4 12.4 101 124-250 256-365 (405)
125 PLN02501 digalactosyldiacylgly 92.1 0.81 1.8E-05 46.4 8.9 78 168-260 603-685 (794)
126 PLN02846 digalactosyldiacylgly 91.9 4.4 9.5E-05 39.4 13.5 72 171-257 289-364 (462)
127 COG3914 Spy Predicted O-linked 91.9 0.51 1.1E-05 46.3 6.9 120 106-233 427-560 (620)
128 cd01635 Glycosyltransferase_GT 91.6 0.74 1.6E-05 38.5 7.2 49 165-215 160-216 (229)
129 PF06258 Mito_fiss_Elm1: Mitoc 90.5 1.4 3E-05 40.5 8.2 57 175-234 221-281 (311)
130 TIGR02193 heptsyl_trn_I lipopo 90.5 2 4.3E-05 39.2 9.3 142 100-254 171-319 (319)
131 TIGR02919 accessory Sec system 89.1 4.5 9.8E-05 39.0 10.8 93 166-270 328-426 (438)
132 COG0763 LpxB Lipid A disacchar 88.5 3 6.5E-05 39.1 8.8 109 179-290 261-378 (381)
133 PLN00142 sucrose synthase 88.1 4.1 8.8E-05 42.3 10.2 65 188-262 670-742 (815)
134 TIGR02470 sucr_synth sucrose s 87.3 4.7 0.0001 41.7 10.1 87 166-262 619-719 (784)
135 COG4370 Uncharacterized protei 86.0 4.6 9.9E-05 36.9 8.1 62 199-265 325-388 (412)
136 PLN02939 transferase, transfer 86.0 25 0.00055 37.2 14.5 91 166-263 837-942 (977)
137 PLN02316 synthase/transferase 84.1 37 0.00081 36.4 15.0 116 166-291 900-1031(1036)
138 TIGR02400 trehalose_OtsA alpha 83.3 5.7 0.00012 38.5 8.3 100 172-291 342-454 (456)
139 PLN03063 alpha,alpha-trehalose 82.3 8.9 0.00019 40.0 9.7 103 178-295 371-479 (797)
140 PF00731 AIRC: AIR carboxylase 80.1 27 0.00058 28.5 9.8 139 110-272 2-148 (150)
141 PRK14099 glycogen synthase; Pr 79.2 43 0.00092 32.7 12.8 87 170-263 355-454 (485)
142 cd03788 GT1_TPS Trehalose-6-Ph 78.8 8.8 0.00019 37.2 7.9 101 171-291 346-459 (460)
143 PF04464 Glyphos_transf: CDP-G 78.6 3.1 6.7E-05 38.8 4.6 109 166-287 252-366 (369)
144 cd03789 GT1_LPS_heptosyltransf 72.8 7.7 0.00017 34.5 5.4 95 108-210 121-223 (279)
145 COG3660 Predicted nucleoside-d 69.7 37 0.0008 30.5 8.6 92 110-210 164-271 (329)
146 PRK14501 putative bifunctional 69.6 15 0.00032 37.9 7.2 109 170-294 346-463 (726)
147 cd03793 GT1_Glycogen_synthase_ 67.2 33 0.00071 34.4 8.6 78 178-256 470-552 (590)
148 COG0438 RfaG Glycosyltransfera 65.4 90 0.0019 26.9 16.8 87 166-264 257-350 (381)
149 KOG2941 Beta-1,4-mannosyltrans 64.3 1.3E+02 0.0028 28.3 11.3 141 107-267 253-424 (444)
150 PRK12446 undecaprenyldiphospho 63.5 23 0.00051 32.9 6.7 98 109-210 3-120 (352)
151 PF05159 Capsule_synth: Capsul 61.8 19 0.00041 32.0 5.6 42 168-212 185-226 (269)
152 TIGR02201 heptsyl_trn_III lipo 61.3 24 0.00052 32.4 6.4 98 107-210 180-285 (344)
153 PF06506 PrpR_N: Propionate ca 59.5 6.5 0.00014 32.7 2.0 33 181-214 31-63 (176)
154 TIGR02195 heptsyl_trn_II lipop 58.3 34 0.00075 31.2 6.8 96 107-210 173-276 (334)
155 TIGR01470 cysG_Nterm siroheme 57.2 1.2E+02 0.0027 25.8 10.0 146 108-273 10-165 (205)
156 PRK10964 ADP-heptose:LPS hepto 55.5 24 0.00052 32.1 5.3 135 108-254 178-320 (322)
157 PRK06718 precorrin-2 dehydroge 54.9 1.2E+02 0.0025 25.9 9.1 142 108-272 11-164 (202)
158 COG0859 RfaF ADP-heptose:LPS h 53.8 40 0.00086 31.1 6.4 95 108-210 175-276 (334)
159 PF01075 Glyco_transf_9: Glyco 53.6 26 0.00056 30.3 4.9 98 107-210 104-208 (247)
160 cd07025 Peptidase_S66 LD-Carbo 51.8 32 0.0007 31.0 5.4 75 120-213 45-121 (282)
161 PRK10916 ADP-heptose:LPS hepto 49.6 41 0.00089 31.0 5.9 96 107-210 179-286 (348)
162 cd01840 SGNH_hydrolase_yrhL_li 48.5 58 0.0013 25.9 5.9 38 107-145 50-87 (150)
163 PLN02470 acetolactate synthase 47.8 70 0.0015 32.0 7.5 29 183-211 75-109 (585)
164 PRK10422 lipopolysaccharide co 47.7 63 0.0014 29.8 6.8 98 107-210 182-287 (352)
165 COG0801 FolK 7,8-dihydro-6-hyd 47.2 43 0.00093 27.6 4.9 36 110-145 3-38 (160)
166 PF08030 NAD_binding_6: Ferric 45.0 16 0.00035 29.2 2.1 39 109-147 3-46 (156)
167 KOG0853 Glycosyltransferase [C 43.9 52 0.0011 32.2 5.6 61 196-264 381-441 (495)
168 COG1698 Uncharacterized protei 43.3 90 0.0019 23.0 5.4 49 245-293 17-69 (93)
169 PF07429 Glyco_transf_56: 4-al 42.9 2.9E+02 0.0063 25.9 11.1 129 110-254 185-331 (360)
170 PF08452 DNAP_B_exo_N: DNA pol 40.4 15 0.00033 19.3 0.8 19 95-113 2-20 (22)
171 cd07062 Peptidase_S66_mccF_lik 37.2 65 0.0014 29.4 5.0 75 120-213 49-125 (308)
172 PRK04885 ppnK inorganic polyph 37.2 59 0.0013 29.1 4.6 52 186-257 37-94 (265)
173 cd03412 CbiK_N Anaerobic cobal 37.1 60 0.0013 25.4 4.2 37 109-145 2-40 (127)
174 cd07039 TPP_PYR_POX Pyrimidine 36.1 78 0.0017 25.9 4.9 27 185-211 64-96 (164)
175 PF05225 HTH_psq: helix-turn-h 35.7 66 0.0014 20.3 3.4 25 242-266 1-26 (45)
176 PRK02797 4-alpha-L-fucosyltran 34.7 3.7E+02 0.0081 24.8 11.7 126 110-251 146-289 (322)
177 PF10093 DUF2331: Uncharacteri 33.7 71 0.0015 30.2 4.6 86 121-210 192-288 (374)
178 COG3195 Uncharacterized protei 33.7 1.5E+02 0.0032 24.7 5.9 92 175-271 64-164 (176)
179 PF06180 CbiK: Cobalt chelatas 33.7 54 0.0012 29.3 3.8 39 109-147 2-43 (262)
180 COG4394 Uncharacterized protei 33.6 1.9E+02 0.004 26.5 7.0 84 122-208 187-280 (370)
181 cd07038 TPP_PYR_PDC_IPDC_like 32.7 1.2E+02 0.0027 24.6 5.5 28 185-212 60-93 (162)
182 PRK14077 pnk inorganic polypho 31.2 88 0.0019 28.4 4.8 54 182-257 64-121 (287)
183 PLN02948 phosphoribosylaminoim 30.4 5.7E+02 0.012 25.6 13.2 145 109-277 411-563 (577)
184 PLN02929 NADH kinase 29.4 69 0.0015 29.3 3.8 63 187-257 67-138 (301)
185 TIGR02398 gluc_glyc_Psyn gluco 29.1 5.6E+02 0.012 25.1 14.4 106 169-293 365-482 (487)
186 PRK02155 ppnK NAD(+)/NADH kina 28.5 1E+02 0.0023 27.9 4.8 54 182-257 63-120 (291)
187 PRK07710 acetolactate synthase 28.3 2.5E+02 0.0055 27.9 8.0 28 184-211 78-111 (571)
188 PF14165 YtzH: YtzH-like prote 27.4 1.8E+02 0.0039 21.4 4.8 36 242-277 27-62 (87)
189 TIGR01162 purE phosphoribosyla 26.2 3.7E+02 0.008 22.1 11.0 139 113-274 3-148 (156)
190 PRK01231 ppnK inorganic polyph 25.6 3.7E+02 0.008 24.4 7.8 51 187-257 65-119 (295)
191 PRK15062 hydrogenase isoenzyme 25.4 1.9E+02 0.0042 27.1 5.9 34 99-133 122-155 (364)
192 PRK14092 2-amino-4-hydroxy-6-h 25.3 1.7E+02 0.0037 24.1 5.1 29 107-135 6-34 (163)
193 PF05693 Glycogen_syn: Glycoge 25.0 58 0.0013 32.7 2.6 90 176-270 463-566 (633)
194 COG0041 PurE Phosphoribosylcar 25.0 3.9E+02 0.0085 22.0 11.5 143 110-276 4-154 (162)
195 PRK02649 ppnK inorganic polyph 25.0 1.1E+02 0.0025 27.9 4.4 53 185-257 69-125 (305)
196 PRK00994 F420-dependent methyl 24.7 5E+02 0.011 23.1 11.2 46 102-147 23-70 (277)
197 cd07037 TPP_PYR_MenD Pyrimidin 24.6 54 0.0012 26.9 2.0 27 185-211 61-93 (162)
198 PF02016 Peptidase_S66: LD-car 24.2 82 0.0018 28.4 3.3 74 121-213 46-121 (284)
199 PRK04539 ppnK inorganic polyph 23.8 2E+02 0.0042 26.2 5.7 54 182-257 68-125 (296)
200 PRK01911 ppnK inorganic polyph 23.8 1.3E+02 0.0029 27.3 4.6 54 182-257 64-121 (292)
201 TIGR00725 conserved hypothetic 23.5 3.2E+02 0.0068 22.3 6.4 97 98-212 23-123 (159)
202 PRK10353 3-methyl-adenine DNA 23.5 1.3E+02 0.0029 25.4 4.2 60 208-267 21-93 (187)
203 PRK02231 ppnK inorganic polyph 23.4 1E+02 0.0023 27.7 3.8 56 178-255 38-97 (272)
204 PF09547 Spore_IV_A: Stage IV 23.3 1.5E+02 0.0032 28.8 4.8 75 179-255 141-234 (492)
205 PF05673 DUF815: Protein of un 23.2 3.3E+02 0.0072 24.2 6.7 61 222-293 180-247 (249)
206 COG1737 RpiR Transcriptional r 22.8 2.8E+02 0.006 24.8 6.5 78 110-215 133-215 (281)
207 PRK03372 ppnK inorganic polyph 22.7 1.6E+02 0.0034 27.0 4.8 54 182-257 72-129 (306)
208 PRK04330 hypothetical protein; 22.5 3E+02 0.0065 20.3 5.3 47 247-293 15-65 (88)
209 COG1619 LdcA Uncharacterized p 22.5 2.2E+02 0.0047 26.3 5.7 26 122-147 59-84 (313)
210 PF04558 tRNA_synt_1c_R1: Glut 22.5 48 0.001 27.4 1.3 23 225-255 109-131 (164)
211 PRK08155 acetolactate synthase 22.5 1E+02 0.0022 30.6 3.9 28 184-211 76-109 (564)
212 PF15024 Glyco_transf_18: Glyc 22.2 2E+02 0.0044 28.7 5.7 82 171-257 327-431 (559)
213 TIGR00730 conserved hypothetic 21.9 2.7E+02 0.0058 23.2 5.7 100 98-211 24-133 (178)
214 cd07035 TPP_PYR_POX_like Pyrim 21.9 3E+02 0.0066 21.6 6.0 28 185-212 60-93 (155)
215 PF03685 UPF0147: Uncharacteri 21.8 2.7E+02 0.0058 20.4 4.9 48 245-292 10-61 (85)
216 PRK03378 ppnK inorganic polyph 21.7 1.4E+02 0.0031 27.0 4.4 54 182-257 63-120 (292)
217 TIGR00075 hypD hydrogenase exp 21.5 2.6E+02 0.0056 26.4 5.9 34 99-133 128-161 (369)
218 TIGR03164 UHCUDC OHCU decarbox 21.3 4.3E+02 0.0092 21.6 6.7 53 216-272 97-152 (157)
219 PRK07525 sulfoacetaldehyde ace 21.0 5.3E+02 0.012 25.7 8.7 28 184-211 68-101 (588)
220 PLN02859 glutamine-tRNA ligase 20.7 2E+02 0.0043 30.0 5.5 38 227-272 113-157 (788)
221 COG2159 Predicted metal-depend 20.7 5.4E+02 0.012 23.2 7.9 69 120-200 140-210 (293)
222 PF06204 CBM_X: Putative carbo 20.2 53 0.0012 22.7 1.0 23 173-195 24-46 (66)
223 COG1448 TyrB Aspartate/tyrosin 20.2 7.6E+02 0.016 23.5 10.1 159 97-278 161-333 (396)
No 1
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=2.5e-56 Score=425.64 Aligned_cols=281 Identities=27% Similarity=0.516 Sum_probs=233.6
Q ss_pred ceeeCCCC-CCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhh------hcCCCCCCCCccc
Q 047662 7 MFRIAPNM-PEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAF------TVVPELLPIGPLL 79 (301)
Q Consensus 7 ~~~~~pg~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~------~~~~~v~~VGpl~ 79 (301)
..+.+||+ |+++.+|+| .+....+ . ...+.+..+.+++++++|+||+++||+++. +..|+++.|||++
T Consensus 173 ~~~~vPgl~~~l~~~dlp-~~~~~~~---~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~ 247 (468)
T PLN02207 173 EMLSIPGFVNPVPANVLP-SALFVED---G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIF 247 (468)
T ss_pred CeEECCCCCCCCChHHCc-chhcCCc---c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCc
Confidence 34569999 689999999 4444222 1 333456666788999999999999998743 3457899999998
Q ss_pred cCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCc
Q 047662 80 AGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDG 159 (301)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~ 159 (301)
...... .....+..+.+|.+|||+++++|||||||||...++.+++++++.+|+.++++|||+++.... .....+|++
T Consensus 248 ~~~~~~-~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~ 325 (468)
T PLN02207 248 DLKAQP-HPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-TNDDLLPEG 325 (468)
T ss_pred ccccCC-CCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc-cccccCCHH
Confidence 643211 000001133579999999998999999999999999999999999999999999999985311 112348899
Q ss_pred hhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC---
Q 047662 160 FQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN--- 236 (301)
Q Consensus 160 ~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~--- 236 (301)
|.+++++|+++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..+
T Consensus 326 f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~ 405 (468)
T PLN02207 326 FLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRV 405 (468)
T ss_pred HHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988878999988421
Q ss_pred -CCCCCCHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhc
Q 047662 237 -ESGIITREEIKNKVDQVLG--HQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFF 294 (301)
Q Consensus 237 -~~~~~~~~~l~~av~~vl~--~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~ 294 (301)
..+.+++++|+++|+++|+ +++||+||+++++++++++++||||..++++||+++..-
T Consensus 406 ~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 406 HSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred ccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 1235699999999999997 579999999999999999999999999999999998753
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1e-55 Score=422.94 Aligned_cols=287 Identities=33% Similarity=0.639 Sum_probs=241.0
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC---CCCCCCCccccCCCCC
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV---PELLPIGPLLAGNRLG 85 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~---~~v~~VGpl~~~~~~~ 85 (301)
..+||+|+++.+||| .+.......+.+...+.+.++.+.+++++|+|||++||+.+...+ .+++.|||++......
T Consensus 174 ~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v~~iGPl~~~~~~~ 252 (480)
T PLN02555 174 VQLPCMPLLKYDEIP-SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGPLFKMAKTP 252 (480)
T ss_pred eecCCCCCcCHhhCc-ccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCEEEeCcccCccccc
Confidence 459999999999999 555433334456677777788889999999999999999877654 2489999998632110
Q ss_pred -CC-CCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC--CCCCCCCCchh
Q 047662 86 -NS-AGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT--DANDRYPDGFQ 161 (301)
Q Consensus 86 -~~-~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~~lp~~~~ 161 (301)
.. ....+..+.+|.+||+++++++||||||||+..++.+++.+++.+|+.++++|||+++..... .....+|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~ 332 (480)
T PLN02555 253 NSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFL 332 (480)
T ss_pred cccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhh
Confidence 00 112244566899999999988999999999999999999999999999999999999843110 11234788999
Q ss_pred hhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC--CCC
Q 047662 162 ERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN--ESG 239 (301)
Q Consensus 162 ~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~--~~~ 239 (301)
+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.|++++++.||+|+.+... ...
T Consensus 333 ~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~ 412 (480)
T PLN02555 333 EKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENK 412 (480)
T ss_pred hhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccC
Confidence 889999999999999999999999999999999999999999999999999999999999999989999999521 124
Q ss_pred CCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhccc
Q 047662 240 IITREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFNA 296 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~~ 296 (301)
.+++++|.++|+++|.++ ++|+||++|++++++|+++||||..++++||+++.+..+
T Consensus 413 ~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~~ 472 (480)
T PLN02555 413 LITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKSV 472 (480)
T ss_pred cCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhccc
Confidence 689999999999999654 799999999999999999999999999999999987643
No 3
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.5e-55 Score=418.36 Aligned_cols=274 Identities=30% Similarity=0.641 Sum_probs=232.1
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccccCCC
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLLAGNR 83 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~~~~~ 83 (301)
..+||+|+++.+|+| .+.... ...+..++... ..+.+++++|+|||++||+.+.... +++++|||++....
T Consensus 167 ~~iPg~~~~~~~dlp-~~~~~~--~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~ 242 (451)
T PLN02410 167 ELVPEFHPLRCKDFP-VSHWAS--LESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVAS 242 (451)
T ss_pred ccCCCCCCCChHHCc-chhcCC--cHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccC
Confidence 469999999999999 443322 22344444333 3567899999999999999876654 57999999986432
Q ss_pred CCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCC--CCCCCCCchh
Q 047662 84 LGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTD--ANDRYPDGFQ 161 (301)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~--~~~~lp~~~~ 161 (301)
.. ...+..+.+|.+|||+++++|||||||||...++.+++.+++.||+.++++|||+++.....+ ....+|++|.
T Consensus 243 ~~---~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~ 319 (451)
T PLN02410 243 AP---TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFS 319 (451)
T ss_pred CC---ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHH
Confidence 11 112234457999999999999999999999999999999999999999999999998531111 1124899999
Q ss_pred hhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCC
Q 047662 162 ERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGII 241 (301)
Q Consensus 162 ~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~ 241 (301)
+|+++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+. ..+
T Consensus 320 er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~----~~~ 395 (451)
T PLN02410 320 KIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE----GDL 395 (451)
T ss_pred HhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC----Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998889999995 568
Q ss_pred CHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 242 TREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 242 ~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
++++|+++|+++|.++ +||+||+++++.+++++.+||||..++++||+++..
T Consensus 396 ~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 396 DRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred cHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 9999999999999765 799999999999999999999999999999999864
No 4
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.5e-55 Score=417.97 Aligned_cols=272 Identities=34% Similarity=0.692 Sum_probs=231.3
Q ss_pred eCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhh---------cCCCCCCCCcccc
Q 047662 10 IAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFT---------VVPELLPIGPLLA 80 (301)
Q Consensus 10 ~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~---------~~~~v~~VGpl~~ 80 (301)
.+||+|+++.+|+| .+...+.......+.+.+.++.+.+++++++|||.+||+.+.. ..|+++.|||++.
T Consensus 167 ~~Pg~~~l~~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~ 245 (448)
T PLN02562 167 VLPEQPLLSTEDLP-WLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHN 245 (448)
T ss_pred cCCCCCCCChhhCc-chhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCccc
Confidence 69999999999999 4443332233456777788888899999999999999986443 2468999999987
Q ss_pred CCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCc-cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCc
Q 047662 81 GNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFT-ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDG 159 (301)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~ 159 (301)
...........++.+.+|.+|||+++++|||||||||.. .++.+++.+++.+|+.++++|||+++.. ....+|++
T Consensus 246 ~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~----~~~~l~~~ 321 (448)
T PLN02562 246 QEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV----WREGLPPG 321 (448)
T ss_pred ccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC----chhhCCHH
Confidence 532110011224556779999999998899999999985 6789999999999999999999999753 11248889
Q ss_pred hhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 160 FQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 160 ~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
|.+++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.
T Consensus 322 ~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~----- 396 (448)
T PLN02562 322 YVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS----- 396 (448)
T ss_pred HHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999987689998883
Q ss_pred CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 240 IITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
.+++++|.++|+++|.|++||+||+++++.++++ .+||||.+++++||++++
T Consensus 397 ~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 397 GFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 3799999999999999999999999999999886 667999999999999873
No 5
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.2e-55 Score=414.02 Aligned_cols=277 Identities=32% Similarity=0.638 Sum_probs=232.9
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC---CCCCCCCccccCCC--
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV---PELLPIGPLLAGNR-- 83 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~---~~v~~VGpl~~~~~-- 83 (301)
..+||+|+++.+||| .++......+.+.+++.+.++.+.+++++|+|||++||+.+.... ++++.|||+++...
T Consensus 154 ~~~pg~p~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~ 232 (449)
T PLN02173 154 LPIKDLPLLELQDLP-TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLD 232 (449)
T ss_pred CCCCCCCCCChhhCC-hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhcc
Confidence 348999999999999 555433333455666778888889999999999999999876654 47999999985311
Q ss_pred --C-CCC--CCCCC--CCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCC
Q 047662 84 --L-GNS--AGHFW--REDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRY 156 (301)
Q Consensus 84 --~-~~~--~~~~~--~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~l 156 (301)
. ... ..+.| ..++.|.+||++++++|||||||||...++.+++.+++.+| ++.+|||+++.. ....+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~----~~~~l 306 (449)
T PLN02173 233 QQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS----EESKL 306 (449)
T ss_pred ccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc----chhcc
Confidence 0 000 01222 23456999999999999999999999999999999999999 788999999853 12348
Q ss_pred CCchhhhh-cCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 157 PDGFQERV-SARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 157 p~~~~~~~-~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
|++|.+++ ++++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..
T Consensus 307 p~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 307 PPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred cchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 88998888 57889999999999999999999999999999999999999999999999999999999988899999964
Q ss_pred CC-CCCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 236 NE-SGIITREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 236 ~~-~~~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
++ ...+++++|+++|+++|.++ ++|+||+++++++++++++||||.+++++||+++.
T Consensus 387 ~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred cccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 22 13479999999999999764 68999999999999999999999999999999875
No 6
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=8.6e-55 Score=414.03 Aligned_cols=273 Identities=30% Similarity=0.538 Sum_probs=229.0
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----------CCCCCCCc
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----------PELLPIGP 77 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----------~~v~~VGp 77 (301)
..+||+|+++.+|+|. +...+. ......+.+.++++.+++++|+|||++||+.+...+ +++++|||
T Consensus 167 ~~vPg~p~l~~~dlp~-~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGP 243 (470)
T PLN03015 167 LKIPGCKPVGPKELME-TMLDRS--DQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGP 243 (470)
T ss_pred eeCCCCCCCChHHCCH-hhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecC
Confidence 4699999999999994 332222 122333446677889999999999999999866544 46999999
Q ss_pred cccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCC--------
Q 047662 78 LLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDIT-------- 149 (301)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~-------- 149 (301)
++..... ...+.+|.+|||+++++|||||||||...++.+++.+++.+|+.++++|||+++.+..
T Consensus 244 l~~~~~~-------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 316 (470)
T PLN03015 244 IVRTNVH-------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSD 316 (470)
T ss_pred CCCCccc-------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccccccccc
Confidence 9853211 0123479999999999999999999999999999999999999999999999974311
Q ss_pred CC-CCCCCCCchhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhcee
Q 047662 150 TD-ANDRYPDGFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIW 227 (301)
Q Consensus 150 ~~-~~~~lp~~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~ 227 (301)
.. ....+|++|.+|+.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.|
T Consensus 317 ~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~ 396 (470)
T PLN03015 317 DDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI 396 (470)
T ss_pred ccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHh
Confidence 01 12258999999999888765 99999999999999999999999999999999999999999999999999998889
Q ss_pred eeEEEeec-CCCCCCCHHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 228 KVGLRFDK-NESGIITREEIKNKVDQVLG-----HQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 228 G~G~~l~~-~~~~~~~~~~l~~av~~vl~-----~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
|+|+.+.. ...+.+++++|+++|+++|. ..++|+||++|++++++|+++||||..++++|+.++
T Consensus 397 gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 397 GVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred CeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 99999952 11246899999999999994 238999999999999999999999999999999876
No 7
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.2e-54 Score=413.23 Aligned_cols=282 Identities=30% Similarity=0.562 Sum_probs=232.9
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhccc--ccEEEEcCcccccchhhhcC--CCCCCCCccccCCC-
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRA--VNFQLCHSTYELESEAFTVV--PELLPIGPLLAGNR- 83 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vl~ns~~~le~~~~~~~--~~v~~VGpl~~~~~- 83 (301)
..+||+|+++.+||| .++...+.++.+..++.+.++.+.. ++++|+|||++||+.+.... .+++.|||+++...
T Consensus 155 ~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~v~~VGPL~~~~~~ 233 (455)
T PLN02152 155 FEFPNLPSLEIRDLP-SFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNIEMVAVGPLLPAEIF 233 (455)
T ss_pred eecCCCCCCchHHCc-hhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcCCEEEEcccCccccc
Confidence 459999999999999 5554333344555666666665543 57999999999999887766 36999999985321
Q ss_pred -CCCCCC--CCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-----CC---
Q 047662 84 -LGNSAG--HFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-----DA--- 152 (301)
Q Consensus 84 -~~~~~~--~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-----~~--- 152 (301)
...... ..+..+.+|.+|||+++++|||||||||...++.+++++++.+|+.++++|||+++++... ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~ 313 (455)
T PLN02152 234 TGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEET 313 (455)
T ss_pred cccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccccc
Confidence 000000 1123345799999999988999999999999999999999999999999999999853110 00
Q ss_pred CCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEE
Q 047662 153 NDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLR 232 (301)
Q Consensus 153 ~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~ 232 (301)
...+|++|.+++++|+++.+|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.
T Consensus 314 ~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 393 (455)
T PLN02152 314 EIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVR 393 (455)
T ss_pred ccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEE
Confidence 11247889999999999999999999999999999999999999999999999999999999999999999987788888
Q ss_pred eecCCCCCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 233 FDKNESGIITREEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 233 l~~~~~~~~~~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
+..+..+.+++++|+++|+++|+++ +||+||+++++++++++.+||||..++++||+++
T Consensus 394 ~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 394 VRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred eecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 7543234579999999999999765 5899999999999999999999999999999986
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=8.9e-55 Score=415.82 Aligned_cols=281 Identities=30% Similarity=0.569 Sum_probs=236.2
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----------CCCCCCCc
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----------PELLPIGP 77 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----------~~v~~VGp 77 (301)
..+||+|+++.+|+| .+...++ +.....+.+.+..+.+++++|+|||++||+.+.... ++++.|||
T Consensus 163 ~~iPg~~~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGP 239 (481)
T PLN02992 163 LAMPGCEPVRFEDTL-DAYLVPD--EPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGP 239 (481)
T ss_pred cccCCCCccCHHHhh-HhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecC
Confidence 459999999999999 4333232 234556667777888999999999999999877643 46999999
Q ss_pred cccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-------
Q 047662 78 LLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT------- 150 (301)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~------- 150 (301)
++...... ..+.+|.+|||+++++|||||||||...++.+++++++.+|+.++++|||++++....
T Consensus 240 l~~~~~~~-------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~ 312 (481)
T PLN02992 240 LCRPIQSS-------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYF 312 (481)
T ss_pred ccCCcCCC-------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccc
Confidence 98642111 2456799999999889999999999999999999999999999999999999743110
Q ss_pred --------C-CCCCCCCchhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhH
Q 047662 151 --------D-ANDRYPDGFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNE 220 (301)
Q Consensus 151 --------~-~~~~lp~~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na 220 (301)
. ....+|++|.+|+.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||
T Consensus 313 ~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na 392 (481)
T PLN02992 313 SANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNA 392 (481)
T ss_pred cCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHH
Confidence 0 01248899999998877665 9999999999999999999999999999999999999999999999999
Q ss_pred HhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhh--cCCChHHHHHHHHHHHHhcc
Q 047662 221 KYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIR--EGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 221 ~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~--~~gss~~~l~~~v~~~~~~~ 295 (301)
+++++.+|+|+.++.. .+.+++++|.++|+++|.++ ++|+||+++++.+++|++ +||||..++++||+++.++-
T Consensus 393 ~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~ 471 (481)
T PLN02992 393 ALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFL 471 (481)
T ss_pred HHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHH
Confidence 9997558999999631 14689999999999999764 799999999999999995 59999999999999998876
Q ss_pred cCCCC
Q 047662 296 ADNEC 300 (301)
Q Consensus 296 ~~~~~ 300 (301)
.+-.|
T Consensus 472 ~~~~~ 476 (481)
T PLN02992 472 ERVRC 476 (481)
T ss_pred HHHHH
Confidence 55544
No 9
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.1e-54 Score=411.08 Aligned_cols=269 Identities=31% Similarity=0.617 Sum_probs=224.2
Q ss_pred eeeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC------CCCCCCCccccC
Q 047662 8 FRIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV------PELLPIGPLLAG 81 (301)
Q Consensus 8 ~~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~------~~v~~VGpl~~~ 81 (301)
.+.+||+|+++.+||| .+....+ .....++.+..+.+.+++++|+|||++||+.+...+ ++++.|||++..
T Consensus 170 ~v~iPg~p~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~ 246 (451)
T PLN03004 170 TVHIPGVPPMKGSDMP-KAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVN 246 (451)
T ss_pred eecCCCCCCCChHHCc-hhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccC
Confidence 3569999999999999 4554332 234566677777888999999999999999866543 479999999853
Q ss_pred CCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-C---CCC-CC
Q 047662 82 NRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-D---AND-RY 156 (301)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~---~~~-~l 156 (301)
....+ ... ..+.+|.+|||+++++|||||||||...++.+++++++.+|+.++++|||+++..... . ... .+
T Consensus 247 ~~~~~--~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~l 323 (451)
T PLN03004 247 GRIED--RND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLL 323 (451)
T ss_pred ccccc--ccc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhC
Confidence 21110 011 1345699999999999999999999999999999999999999999999999853110 0 112 28
Q ss_pred CCchhhhhcCCce-eecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 157 PDGFQERVSARGR-MIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 157 p~~~~~~~~~~~~-v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
|++|.+|+++++. +.+|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..
T Consensus 324 p~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~ 403 (451)
T PLN03004 324 PEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNE 403 (451)
T ss_pred ChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecC
Confidence 8999999987655 559999999999999999999999999999999999999999999999999999877899999974
Q ss_pred CCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHH
Q 047662 236 NESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRK 282 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~ 282 (301)
++.+.+++++|+++|+++|++++||+||+++++++++|+++||||.+
T Consensus 404 ~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 404 SETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred CcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 22236799999999999999999999999999999999999999864
No 10
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=9e-54 Score=410.32 Aligned_cols=286 Identities=29% Similarity=0.517 Sum_probs=235.2
Q ss_pred eCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC------CCCCCCCccccCCC
Q 047662 10 IAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV------PELLPIGPLLAGNR 83 (301)
Q Consensus 10 ~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~------~~v~~VGpl~~~~~ 83 (301)
.+||+|.++.+|+| .++......+.+..++.+.+.....++++|+|||++||+.+.... ++++.|||+++...
T Consensus 176 ~iPg~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~ 254 (477)
T PLN02863 176 KIPNCPKYPWWQIS-SLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSG 254 (477)
T ss_pred CCCCCCCcChHhCc-hhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCccccc
Confidence 58999999999999 555432223345666666666677889999999999999877653 57999999985321
Q ss_pred CCC---C-CCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-CCCCCCCC
Q 047662 84 LGN---S-AGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-DANDRYPD 158 (301)
Q Consensus 84 ~~~---~-~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~lp~ 158 (301)
... . ..+.+..+++|.+|||+++++|||||||||...++.+++.+++.+|+.++++|||+++..... .....+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~ 334 (477)
T PLN02863 255 EKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPS 334 (477)
T ss_pred ccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCH
Confidence 100 0 001111345799999999989999999999999999999999999999999999999854211 11235888
Q ss_pred chhhhhcCCcee-ecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 159 GFQERVSARGRM-IGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 159 ~~~~~~~~~~~v-~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
+|.+++.+++++ .+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++..+.
T Consensus 335 ~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~ 414 (477)
T PLN02863 335 GFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA 414 (477)
T ss_pred HHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC
Confidence 998888765554 5999999999999999999999999999999999999999999999999999887789999995322
Q ss_pred CCCCCHHHHHHHHHHHh-CChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhccc
Q 047662 238 SGIITREEIKNKVDQVL-GHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFNA 296 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl-~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~~ 296 (301)
...++++++.++|+++| ++++||+||+++++++++++++||||.+++++||+++...|-
T Consensus 415 ~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~~ 474 (477)
T PLN02863 415 DTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELGL 474 (477)
T ss_pred CCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhcc
Confidence 24568999999999999 677999999999999999999999999999999999987764
No 11
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=7.9e-54 Score=411.60 Aligned_cols=279 Identities=28% Similarity=0.538 Sum_probs=232.6
Q ss_pred eCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----------CCCCCCCcc
Q 047662 10 IAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----------PELLPIGPL 78 (301)
Q Consensus 10 ~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----------~~v~~VGpl 78 (301)
.+||+|+++.+|+| .+...++ +....++.+..+.+.+++++|+|||++||+.+.... ++++.|||+
T Consensus 170 ~iPGlp~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl 246 (480)
T PLN00164 170 DVPGLPPVPASSLP-APVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPV 246 (480)
T ss_pred ecCCCCCCChHHCC-chhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCC
Confidence 49999999999999 4443322 122345556677788999999999999999866543 479999999
Q ss_pred ccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC--------
Q 047662 79 LAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-------- 150 (301)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-------- 150 (301)
+...... ..+..+.+|.+|||+++++|||||||||...++.+++.+++.+|+.++++|||+++.....
T Consensus 247 ~~~~~~~----~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~ 322 (480)
T PLN00164 247 ISLAFTP----PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDA 322 (480)
T ss_pred ccccccC----CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCccccccccccc
Confidence 8532111 1123556799999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCCCCchhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeee
Q 047662 151 DANDRYPDGFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKV 229 (301)
Q Consensus 151 ~~~~~lp~~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~ 229 (301)
.....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+
T Consensus 323 ~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gv 402 (480)
T PLN00164 323 DLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGV 402 (480)
T ss_pred chhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCe
Confidence 011238899999998888776 9999999999999999999999999999999999999999999999999998777899
Q ss_pred EEEeecCC--CCCCCHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 230 GLRFDKNE--SGIITREEIKNKVDQVLGHQ-----DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 230 G~~l~~~~--~~~~~~~~l~~av~~vl~~~-----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
|+.+..++ .+.+++++|.++|+++|.++ ++|+||+++++++++++++||||.+++++||+++....
T Consensus 403 G~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 403 AVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred EEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 99996321 13579999999999999753 58999999999999999999999999999999998654
No 12
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.5e-54 Score=411.90 Aligned_cols=279 Identities=30% Similarity=0.535 Sum_probs=232.5
Q ss_pred eeCCCCC-CCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhc-------CCCCCCCCcccc
Q 047662 9 RIAPNMP-EMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTV-------VPELLPIGPLLA 80 (301)
Q Consensus 9 ~~~pg~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~-------~~~v~~VGpl~~ 80 (301)
+.+||++ +++.+|+| .+... +.+..++.+..+.+.+++++++||+.+||..+... .|++++|||++.
T Consensus 174 v~iPgl~~pl~~~dlp-~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~ 248 (481)
T PLN02554 174 LDVPSLTRPYPVKCLP-SVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLH 248 (481)
T ss_pred eECCCCCCCCCHHHCC-CcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcc
Confidence 4599995 89999999 44432 13455666777888999999999999999875543 368999999943
Q ss_pred -CCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCC----------
Q 047662 81 -GNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDIT---------- 149 (301)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~---------- 149 (301)
..... ....+.+.+|.+||+++++++||||||||+..++.+++.+++.+|+.++++|||+++....
T Consensus 249 ~~~~~~---~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~ 325 (481)
T PLN02554 249 LENSGD---DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEF 325 (481)
T ss_pred cccccc---ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccc
Confidence 22110 0001244579999999988899999999998899999999999999999999999975311
Q ss_pred CCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeee
Q 047662 150 TDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKV 229 (301)
Q Consensus 150 ~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~ 229 (301)
.+....+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+
T Consensus 326 ~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~ 405 (481)
T PLN02554 326 TNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGL 405 (481)
T ss_pred cchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCc
Confidence 00112368999999999999999999999999999999999999999999999999999999999999999765556899
Q ss_pred EEEeecC--------CCCCCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 230 GLRFDKN--------ESGIITREEIKNKVDQVLG-HQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 230 G~~l~~~--------~~~~~~~~~l~~av~~vl~-~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
|+.+... ....+++++|+++|+++|. |++||+||+++++++++++++||||..++++||+++.++.
T Consensus 406 Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~~ 480 (481)
T PLN02554 406 AVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKNI 480 (481)
T ss_pred eEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhC
Confidence 9999631 1246899999999999996 7899999999999999999999999999999999998764
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.3e-53 Score=410.30 Aligned_cols=280 Identities=29% Similarity=0.491 Sum_probs=232.6
Q ss_pred eeCCCCC-CCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-------CCCCCCCcccc
Q 047662 9 RIAPNMP-EMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-------PELLPIGPLLA 80 (301)
Q Consensus 9 ~~~pg~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-------~~v~~VGpl~~ 80 (301)
..+||+| +++..|+| .+...+. ..+.+.+.++.+.++++||+|||++||+.+...+ |++++|||+++
T Consensus 179 ~~iPgl~~~l~~~dlp-~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~ 253 (475)
T PLN02167 179 LPIPGFVNSVPTKVLP-PGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILS 253 (475)
T ss_pred eECCCCCCCCChhhCc-hhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccc
Confidence 4599995 79999999 5444322 1334556677788999999999999999866542 68999999986
Q ss_pred CCCCCCCCCCCC-CCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC--CCCCCCC
Q 047662 81 GNRLGNSAGHFW-REDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT--DANDRYP 157 (301)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~~lp 157 (301)
...... .... ..+.+|.+||++++++|||||||||+..++.+++.+++.+|+.++++|||+++.+... .....+|
T Consensus 254 ~~~~~~--~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp 331 (475)
T PLN02167 254 LKDRTS--PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLP 331 (475)
T ss_pred cccccC--CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCC
Confidence 432100 0111 1235799999999989999999999988999999999999999999999999854211 1123489
Q ss_pred CchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC-
Q 047662 158 DGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN- 236 (301)
Q Consensus 158 ~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~- 236 (301)
++|.+++.+++++++|+||..||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+...
T Consensus 332 ~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 411 (475)
T PLN02167 332 EGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY 411 (475)
T ss_pred hHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998866668999999631
Q ss_pred ---CCCCCCHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 237 ---ESGIITREEIKNKVDQVLGHQ-DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 237 ---~~~~~~~~~l~~av~~vl~~~-~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
+...+++++|+++|+++|.++ +||+||+++++.+++++++||||..++++||+++...+
T Consensus 412 ~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 412 VSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred ccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 013579999999999999765 89999999999999999999999999999999998643
No 14
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1e-52 Score=401.60 Aligned_cols=278 Identities=32% Similarity=0.590 Sum_probs=228.0
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC---CCCCCCCccccCC---
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV---PELLPIGPLLAGN--- 82 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~---~~v~~VGpl~~~~--- 82 (301)
..+||+|+++.+|+| .++.... ...+..++.+..+....++++++||+.+||+.+...+ +++++|||++...
T Consensus 161 ~~~Pgl~~~~~~dl~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~ 238 (456)
T PLN02210 161 VELPALPLLEVRDLP-SFMLPSG-GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLG 238 (456)
T ss_pred eeCCCCCCCChhhCC-hhhhcCC-chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcC
Confidence 469999999999999 4444322 2223333334445667899999999999999877663 5799999998521
Q ss_pred -CCCC--CC--CCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCC
Q 047662 83 -RLGN--SA--GHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYP 157 (301)
Q Consensus 83 -~~~~--~~--~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp 157 (301)
.... .. ...|..+.+|.+|||+++++|||||||||....+.+++.+++.+|+.++++|||+++.... ...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~----~~~~ 314 (456)
T PLN02210 239 DDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK----AQNV 314 (456)
T ss_pred cccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc----ccch
Confidence 1100 00 1234556789999999998999999999998889999999999999999999999985411 1133
Q ss_pred Cchhhhh-cCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 158 DGFQERV-SARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 158 ~~~~~~~-~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
+.+.++. ++++++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+...
T Consensus 315 ~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 394 (456)
T PLN02210 315 QVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRND 394 (456)
T ss_pred hhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecc
Confidence 4555665 478888999999999999999999999999999999999999999999999999999998868999999642
Q ss_pred C-CCCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 237 E-SGIITREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 237 ~-~~~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
+ .+.+++++|+++|+++|.++ ++|+||++|++.+++|+++||||..++++||+++.
T Consensus 395 ~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 395 AVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred ccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 1 24689999999999999776 49999999999999999999999999999999975
No 15
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=2.5e-52 Score=395.93 Aligned_cols=276 Identities=28% Similarity=0.522 Sum_probs=226.8
Q ss_pred CCCCCC----CCCCCCCccccC--CCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccc
Q 047662 11 APNMPE----MNSGDCFWTNIG--DLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLL 79 (301)
Q Consensus 11 ~pg~~~----~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~ 79 (301)
+||+|. ++.+|+|. +.. .....+.+..++.+..+.+.+++++|+|||.+||+.+.... ++++.|||++
T Consensus 156 ~pglp~~~v~l~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~ 234 (453)
T PLN02764 156 PPGYPSSKVLLRKQDAYT-MKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVF 234 (453)
T ss_pred CCCCCCCcccCcHhhCcc-hhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCc
Confidence 599983 88999984 422 11222334445444547788999999999999999877654 4699999997
Q ss_pred cCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-CCCCCCCC
Q 047662 80 AGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-DANDRYPD 158 (301)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~lp~ 158 (301)
...... ...+.+|.+|||+++++|||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|+
T Consensus 235 ~~~~~~------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~ 308 (453)
T PLN02764 235 PEPDKT------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPE 308 (453)
T ss_pred cCcccc------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCc
Confidence 543110 01346799999999999999999999998999999999999999999999999854211 11235899
Q ss_pred chhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 159 GFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 159 ~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
+|.++++++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++
T Consensus 309 ~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 309 GFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred chHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 9999998888776 999999999999999999999999999999999999999999999999999987789999985321
Q ss_pred CCCCCHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcccC
Q 047662 238 SGIITREEIKNKVDQVLGHQ-----DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFNAD 297 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~-----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~~~ 297 (301)
.+.+++++|+++|+++|+++ ++|+|++++++.+++ +|||..++++||+++.+..+.
T Consensus 389 ~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~~~~ 449 (453)
T PLN02764 389 TGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDLVSG 449 (453)
T ss_pred CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHhccc
Confidence 13689999999999999764 388888888888854 899999999999999987653
No 16
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=6.6e-52 Score=394.00 Aligned_cols=270 Identities=25% Similarity=0.497 Sum_probs=220.8
Q ss_pred eCCCCCC----CCCCCCCccccCCCCchhHHHHHHHHH-HHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccc
Q 047662 10 IAPNMPE----MNSGDCFWTNIGDLNTQKIIFDLLDRN-MRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLL 79 (301)
Q Consensus 10 ~~pg~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~ 79 (301)
.+||+|+ ++.+|+| .+. . ...+...+.+. .+.+.+++++|+|||.+||+.+.... +++++|||++
T Consensus 154 ~~pglp~~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~ 228 (442)
T PLN02208 154 PPPGYPSSKVLFRENDAH-ALA--T--LSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMF 228 (442)
T ss_pred CCCCCCCcccccCHHHcC-ccc--c--cchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecc
Confidence 3699985 6888999 441 1 12333444433 35677899999999999999866543 6899999998
Q ss_pred cCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-CCCCCCCC
Q 047662 80 AGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-DANDRYPD 158 (301)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~lp~ 158 (301)
...... .+.+.+|.+|||.+++++||||||||...++.+++.+++.+++.++.+|+|+++.+... .....+|+
T Consensus 229 ~~~~~~------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~ 302 (442)
T PLN02208 229 PEPDTS------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPE 302 (442)
T ss_pred cCcCCC------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCH
Confidence 653210 13456899999999989999999999998999999999999999999999999854111 11235899
Q ss_pred chhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 159 GFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 159 ~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
+|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++
T Consensus 303 ~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 303 GFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred HHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 9999987666555 999999999999999999999999999999999999999999999999999887789999997422
Q ss_pred CCCCCHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhc
Q 047662 238 SGIITREEIKNKVDQVLGHQ-----DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFF 294 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~-----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~ 294 (301)
.+.+++++|+++|+++|+++ ++|+||+++++.+. ++|||..++++||+++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 23589999999999999764 49999999999874 3789999999999998653
No 17
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.4e-51 Score=393.43 Aligned_cols=284 Identities=32% Similarity=0.613 Sum_probs=224.1
Q ss_pred ceeeCCCCCC---CCCCCCCccccCCCCchhHHHHHHHHHHH-hcccccEEEEcCcccccchhhhcC-----CCCCCCCc
Q 047662 7 MFRIAPNMPE---MNSGDCFWTNIGDLNTQKIIFDLLDRNMR-AMRAVNFQLCHSTYELESEAFTVV-----PELLPIGP 77 (301)
Q Consensus 7 ~~~~~pg~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGp 77 (301)
..+.+||+|+ ++..|||..+...+. .+. +.+.+. ....++++|+|||.+||+.+...+ ++++.|||
T Consensus 174 ~~~~iPg~p~~~~l~~~dlp~~~~~~~~-~~~----~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGP 248 (491)
T PLN02534 174 EPFVVPGMPQSIEITRAQLPGAFVSLPD-LDD----VRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGP 248 (491)
T ss_pred ceeecCCCCccccccHHHCChhhcCccc-HHH----HHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECc
Confidence 3456899984 999999943333222 222 233333 335688999999999998766543 57999999
Q ss_pred cccCCCCC-CC--CCCCCC-CCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCC-CCC
Q 047662 78 LLAGNRLG-NS--AGHFWR-EDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDIT-TDA 152 (301)
Q Consensus 78 l~~~~~~~-~~--~~~~~~-~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~-~~~ 152 (301)
++...... +. ...... .+.+|.+|||+++++|||||||||...+..+++.+++.+|+.++++|||+++.+.. ...
T Consensus 249 L~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~ 328 (491)
T PLN02534 249 VSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSEL 328 (491)
T ss_pred ccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccch
Confidence 98532110 00 001111 23569999999999999999999999999999999999999999999999984311 111
Q ss_pred -CCCCCCchhhhhcCCc-eeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeE
Q 047662 153 -NDRYPDGFQERVSARG-RMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVG 230 (301)
Q Consensus 153 -~~~lp~~~~~~~~~~~-~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G 230 (301)
...+|++|.+++.+++ ++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|
T Consensus 329 ~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vG 408 (491)
T PLN02534 329 EEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIG 408 (491)
T ss_pred hhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcce
Confidence 1136899988865544 45699999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecC-------CC--C-CCCHHHHHHHHHHHhC---C--hHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 231 LRFDKN-------ES--G-IITREEIKNKVDQVLG---H--QDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 231 ~~l~~~-------~~--~-~~~~~~l~~av~~vl~---~--~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
+++... +. + .+++++|.++|+++|. + +++|+||++|++++++++++||||..+|++||+++.+..
T Consensus 409 v~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 409 VRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred EEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 998521 01 1 4899999999999996 2 389999999999999999999999999999999998643
No 18
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-50 Score=386.06 Aligned_cols=273 Identities=29% Similarity=0.464 Sum_probs=219.0
Q ss_pred CCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccccCC-CCCCCCCC
Q 047662 17 MNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLLAGN-RLGNSAGH 90 (301)
Q Consensus 17 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~~~~-~~~~~~~~ 90 (301)
++.+|+| .+.............+.+....+.+++++|+|||.+||+.+.... ++++.|||+.... ........
T Consensus 182 ~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~ 260 (472)
T PLN02670 182 FRYHEVT-KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTI 260 (472)
T ss_pred ccHHHhh-HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccccccccc
Confidence 6778999 454322212222333445556778899999999999999877654 5799999997531 11000000
Q ss_pred CCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC--CCCCCCCCchhhhhcCCc
Q 047662 91 FWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT--DANDRYPDGFQERVSARG 168 (301)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~~lp~~~~~~~~~~~ 168 (301)
......+|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|++|.+++.+++
T Consensus 261 ~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG 340 (472)
T PLN02670 261 DVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRG 340 (472)
T ss_pred ccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCC
Confidence 001124699999999989999999999999999999999999999999999999853111 112358999999998888
Q ss_pred eee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC-CCCCCHHHH
Q 047662 169 RMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE-SGIITREEI 246 (301)
Q Consensus 169 ~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~-~~~~~~~~l 246 (301)
+++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++ +|+|+.+...+ .+.+++++|
T Consensus 341 ~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i 419 (472)
T PLN02670 341 MIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSV 419 (472)
T ss_pred eEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHH
Confidence 775 999999999999999999999999999999999999999999999999999976 69999996421 245899999
Q ss_pred HHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 247 KNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 247 ~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
+++|+++|.++ +||+||+++++++++ .+...+.++.+++.+....
T Consensus 420 ~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 420 AESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHhc
Confidence 99999999776 799999999999987 5677888999999988766
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.3e-50 Score=386.76 Aligned_cols=274 Identities=31% Similarity=0.542 Sum_probs=226.1
Q ss_pred eeCCCCCCCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccccCCC
Q 047662 9 RIAPNMPEMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLLAGNR 83 (301)
Q Consensus 9 ~~~pg~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~~~~~ 83 (301)
..+||+|+++..|+| .+.... ...+.+.+.+.++.+.+++.|++||+++||+.+...+ ++++.|||+.....
T Consensus 171 ~~iPg~~~l~~~dlp-~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~ 247 (459)
T PLN02448 171 DYIPGLSSTRLSDLP-PIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYME 247 (459)
T ss_pred ccCCCCCCCChHHCc-hhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccc
Confidence 359999999999999 554422 2344566677778888899999999999998855442 47888999975321
Q ss_pred CCCCCCCCC--CCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchh
Q 047662 84 LGNSAGHFW--REDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQ 161 (301)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~ 161 (301)
......... ..+.+|..||+.+++++||||||||....+.+++.+++.+|+.++++|||+++.. ..++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~---------~~~~~ 318 (459)
T PLN02448 248 LKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE---------ASRLK 318 (459)
T ss_pred cCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---------hhhHh
Confidence 100000101 1234799999999889999999999988889999999999999999999988643 12444
Q ss_pred hhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC--CCC
Q 047662 162 ERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN--ESG 239 (301)
Q Consensus 162 ~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~--~~~ 239 (301)
++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+... +.+
T Consensus 319 ~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 319 EICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred HhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 555678888999999999999999999999999999999999999999999999999999999888999998631 124
Q ss_pred CCCHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhc
Q 047662 240 IITREEIKNKVDQVLGHQ-----DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFF 294 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~-----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~ 294 (301)
.+++++|+++|+++|.++ +||+||++|++++++++.+||||.++|++||+++.+.
T Consensus 399 ~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 399 LVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 579999999999999753 7999999999999999999999999999999998753
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.6e-50 Score=388.32 Aligned_cols=279 Identities=32% Similarity=0.576 Sum_probs=226.5
Q ss_pred eCCCCC---CCCCCCCCccccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccccC
Q 047662 10 IAPNMP---EMNSGDCFWTNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLLAG 81 (301)
Q Consensus 10 ~~pg~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~~~ 81 (301)
.+||+| .++..++| .. +....+..++....+.+.+++++++||+++||+++.+.+ .++++|||+...
T Consensus 180 ~~pg~p~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~ 254 (482)
T PLN03007 180 VIPDLPGDIVITEEQIN-DA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLY 254 (482)
T ss_pred eCCCCCCccccCHHhcC-CC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccc
Confidence 489998 46677777 22 223446666666677788999999999999999866665 368899998753
Q ss_pred CCCC---CC-CCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-CCCCCC
Q 047662 82 NRLG---NS-AGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-DANDRY 156 (301)
Q Consensus 82 ~~~~---~~-~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~l 156 (301)
.... .. ....+..+.+|.+||++++++|||||||||....+.+++.+++.+|+.++++|||+++.+... .....+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~l 334 (482)
T PLN03007 255 NRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWL 334 (482)
T ss_pred ccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcC
Confidence 2110 00 001112346799999999989999999999988889999999999999999999999864211 112348
Q ss_pred CCchhhhhcCC-ceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 157 PDGFQERVSAR-GRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 157 p~~~~~~~~~~-~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
|++|.+++.++ +++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+++|+.+..
T Consensus 335 p~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~ 414 (482)
T PLN03007 335 PEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGA 414 (482)
T ss_pred CHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecc
Confidence 88998887654 45569999999999999999999999999999999999999999999999999999876677766632
Q ss_pred C-----CCCCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 236 N-----ESGIITREEIKNKVDQVLGHQ---DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 236 ~-----~~~~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
. +...+++++|+++|+++|.++ +||+||+++++++++++.+||||..++++||+.+.+
T Consensus 415 ~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 415 KKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred ccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 1 124689999999999999887 899999999999999999999999999999999875
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.2e-50 Score=383.96 Aligned_cols=274 Identities=27% Similarity=0.480 Sum_probs=219.4
Q ss_pred eCCCCCC----CCCCCCCc-cccCCCCchhHHHHHHHHHHHhcccccEEEEcCcccccchhhhcC-----CCCCCCCccc
Q 047662 10 IAPNMPE----MNSGDCFW-TNIGDLNTQKIIFDLLDRNMRAMRAVNFQLCHSTYELESEAFTVV-----PELLPIGPLL 79 (301)
Q Consensus 10 ~~pg~~~----~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-----~~v~~VGpl~ 79 (301)
.+||+|. ++.++++. .+.. . ....+.+..+.+.+++.+|+|||.+||+.+...+ ++++.|||++
T Consensus 154 ~~pg~p~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~ 227 (446)
T PLN00414 154 PPPDYPLSKVALRGHDANVCSLFA-N-----SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPML 227 (446)
T ss_pred CCCCCCCCcCcCchhhcccchhhc-c-----cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccC
Confidence 3688885 55555431 2222 1 1234455667788899999999999999877654 4689999997
Q ss_pred cCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCC-CCCCCCCC
Q 047662 80 AGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITT-DANDRYPD 158 (301)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~lp~ 158 (301)
....... ....+.+|.+|||+++++|||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|+
T Consensus 228 ~~~~~~~----~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~ 303 (446)
T PLN00414 228 PEPQNKS----GKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPE 303 (446)
T ss_pred CCccccc----CcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCCh
Confidence 5432110 012345699999999999999999999999999999999999999999999999864221 11235899
Q ss_pred chhhhhcCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 159 GFQERVSARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 159 ~~~~~~~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
+|.++++++++++ +|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++
T Consensus 304 ~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 383 (446)
T PLN00414 304 GFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED 383 (446)
T ss_pred hHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc
Confidence 9999999999887 999999999999999999999999999999999999999999999999999987689999996422
Q ss_pred CCCCCHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcccC
Q 047662 238 SGIITREEIKNKVDQVLGHQ-----DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFNAD 297 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~-----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~~~ 297 (301)
.+.+++++|+++|+++|.++ ++|+||+++++.+.+ +||+| ..+++||+++.+..+.
T Consensus 384 ~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~~~~~ 444 (446)
T PLN00414 384 SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALENEVNN 444 (446)
T ss_pred CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHHhccc
Confidence 23589999999999999764 499999999999744 67744 3389999999766543
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.7e-44 Score=350.48 Aligned_cols=225 Identities=24% Similarity=0.410 Sum_probs=161.9
Q ss_pred cccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCcc-CCHHH
Q 047662 47 MRAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTI-LDQVQ 125 (301)
Q Consensus 47 ~~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~-~~~~~ 125 (301)
+.+++++++|+.+.++++ ++.+|++++||+++..... +.+.++..|++...++++|||||||... ++.+.
T Consensus 224 ~~~~~l~l~ns~~~ld~p-rp~~p~v~~vGgl~~~~~~--------~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~ 294 (500)
T PF00201_consen 224 LSNASLVLINSHPSLDFP-RPLLPNVVEVGGLHIKPAK--------PLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEK 294 (500)
T ss_dssp HHHHHHCCSSTEEE-----HHHHCTSTTGCGC-S------------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHH
T ss_pred HHHHHHHhhhccccCcCC-cchhhcccccCcccccccc--------ccccccchhhhccCCCCEEEEecCcccchhHHHH
Confidence 456788999999999998 8999999999999986543 4667788899885667899999999865 44455
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCC
Q 047662 126 FQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGI 205 (301)
Q Consensus 126 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~Gv 205 (301)
+++++++|++.+++|||++++. .+ ..+++|+++.+|+||.+||+||++++||||||+||++||+++||
T Consensus 295 ~~~~~~~~~~~~~~~iW~~~~~--------~~----~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gv 362 (500)
T PF00201_consen 295 LKEIAEAFENLPQRFIWKYEGE--------PP----ENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGV 362 (500)
T ss_dssp HHHHHHHHHCSTTEEEEEETCS--------HG----CHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT-
T ss_pred HHHHHHHHhhCCCccccccccc--------cc----ccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccC
Confidence 8899999999999999999753 11 23467889999999999999999999999999999999999999
Q ss_pred CcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHH
Q 047662 206 PFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQ 285 (301)
Q Consensus 206 P~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~ 285 (301)
|||++|+++||+.||+++++. |+|+.++. ..++.+++.++|+++|+|++|++||+++++++++ ++-++.+.+.
T Consensus 363 P~l~~P~~~DQ~~na~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~---~p~~p~~~~~ 435 (500)
T PF00201_consen 363 PMLGIPLFGDQPRNAARVEEK-GVGVVLDK---NDLTEEELRAAIREVLENPSYKENAKRLSSLFRD---RPISPLERAV 435 (500)
T ss_dssp -EEE-GCSTTHHHHHHHHHHT-TSEEEEGG---GC-SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT--------------
T ss_pred CccCCCCcccCCccceEEEEE-eeEEEEEe---cCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc---CCCCHHHHHH
Confidence 999999999999999999986 99999984 6789999999999999999999999999999998 4778899999
Q ss_pred HHHHHHHhcccCCC
Q 047662 286 NFLEWLIFFNADNE 299 (301)
Q Consensus 286 ~~v~~~~~~~~~~~ 299 (301)
.++|++.++++..|
T Consensus 436 ~~ie~v~~~~~~~~ 449 (500)
T PF00201_consen 436 WWIEYVARHGGAPH 449 (500)
T ss_dssp --------------
T ss_pred HHHHHHHhcCCCcc
Confidence 99999999887654
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=9.9e-42 Score=329.85 Aligned_cols=229 Identities=18% Similarity=0.275 Sum_probs=199.1
Q ss_pred HhcccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCc---cC
Q 047662 45 RAMRAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFT---IL 121 (301)
Q Consensus 45 ~~~~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~---~~ 121 (301)
+..++++++|+||.+.+|++ ++++|++++|||++.+.... .+.+.++.+|+++.+ +++|||||||.. .+
T Consensus 241 ~l~~~~~l~lvns~~~~d~~-rp~~p~v~~vGgi~~~~~~~------~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~ 312 (507)
T PHA03392 241 ELRNRVQLLFVNVHPVFDNN-RPVPPSVQYLGGLHLHKKPP------QPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDM 312 (507)
T ss_pred HHHhCCcEEEEecCccccCC-CCCCCCeeeecccccCCCCC------CCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCC
Confidence 34467889999999999998 89999999999999753211 156778899999875 469999999985 35
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHH
Q 047662 122 DQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGV 201 (301)
Q Consensus 122 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal 201 (301)
+.+.++.++++++..+++|||++++.. .+ ...++|+++.+|+||.+||+|+.+++||||||+||++||+
T Consensus 313 ~~~~~~~~l~a~~~l~~~viw~~~~~~-------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal 381 (507)
T PHA03392 313 DNEFLQMLLRTFKKLPYNVLWKYDGEV-------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAI 381 (507)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCCc-------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHH
Confidence 788999999999999999999997541 11 1236788999999999999999999999999999999999
Q ss_pred HhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChH
Q 047662 202 SNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSR 281 (301)
Q Consensus 202 ~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~ 281 (301)
++|||||++|+++||+.||+++++. |+|+.++. ..++.++|.++|+++++|++||+||+++++.+++ ++-++.
T Consensus 382 ~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~---~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~---~p~~~~ 454 (507)
T PHA03392 382 DALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDT---VTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRH---QPMTPL 454 (507)
T ss_pred HcCCCEEECCCCccHHHHHHHHHHc-CcEEEecc---CCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh---CCCCHH
Confidence 9999999999999999999999885 99999973 6789999999999999999999999999999998 466788
Q ss_pred HHHHHHHHHHHhcc-cCCC
Q 047662 282 KTFQNFLEWLIFFN-ADNE 299 (301)
Q Consensus 282 ~~l~~~v~~~~~~~-~~~~ 299 (301)
+.+..++|++.+++ +..|
T Consensus 455 ~~av~~iE~v~r~~~g~~~ 473 (507)
T PHA03392 455 HKAIWYTEHVIRNKHGNTS 473 (507)
T ss_pred HHHHHHHHHHHhCCCCccc
Confidence 99999999999998 6555
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1.7e-37 Score=300.84 Aligned_cols=234 Identities=30% Similarity=0.528 Sum_probs=191.8
Q ss_pred HhcccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCC--ceEEEEecCCc---
Q 047662 45 RAMRAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPS--SVLYAAFGSFT--- 119 (301)
Q Consensus 45 ~~~~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vvyvs~GS~~--- 119 (301)
+.+.+++..++|+.+.++...++..+++++|||++...... ....+.+|++..+.. +||||||||+.
T Consensus 220 ~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~--------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~ 291 (496)
T KOG1192|consen 220 GIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQ--------KSPLPLEWLDILDESRHSVVYISFGSMVNSA 291 (496)
T ss_pred HhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCccc--------cccccHHHHHHHhhccCCeEEEECCcccccc
Confidence 34567778999999998885467789999999999873321 111567888887776 89999999997
Q ss_pred cCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhh-ccCCCcceEEecCCchhH
Q 047662 120 ILDQVQFQELAFGLELC-NRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKV-LNHPSIACFLSHCGWNST 197 (301)
Q Consensus 120 ~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~i-L~h~~v~~fItHgG~~s~ 197 (301)
.++.++..+++.+|+.+ +++|||+++.... ..+++++.++-.+|+...+|+||.++ |.|+++++|||||||||+
T Consensus 292 ~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~----~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt 367 (496)
T KOG1192|consen 292 DLPEEQKKELAKALESLQGVTFLWKYRPDDS----IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNST 367 (496)
T ss_pred cCCHHHHHHHHHHHHhCCCceEEEEecCCcc----hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHH
Confidence 79999999999999999 8899999986511 11334433222356777799999998 699999999999999999
Q ss_pred HHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcC
Q 047662 198 MEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREG 277 (301)
Q Consensus 198 ~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~ 277 (301)
+|++++|||||++|+++||+.||+++++.+++++... .+++.+.+..++.+++++++|+++|+++++.+++ ++
T Consensus 368 ~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~----~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~---~p 440 (496)
T KOG1192|consen 368 LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK----RDLVSEELLEAIKEILENEEYKEAAKRLSEILRD---QP 440 (496)
T ss_pred HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh----hhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHc---CC
Confidence 9999999999999999999999999999866666664 4455555999999999999999999999999987 58
Q ss_pred CChHHHHHHHHHHHHhcccCC
Q 047662 278 GSSRKTFQNFLEWLIFFNADN 298 (301)
Q Consensus 278 gss~~~l~~~v~~~~~~~~~~ 298 (301)
.++ +.+..+++...++++..
T Consensus 441 ~~~-~~~~~~~e~~~~~~~~~ 460 (496)
T KOG1192|consen 441 ISP-ELAVKWVEFVARHGGAK 460 (496)
T ss_pred CCH-HHHHHHHHHHHhcCCCc
Confidence 888 88898888888876543
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=4.3e-28 Score=228.65 Aligned_cols=210 Identities=17% Similarity=0.302 Sum_probs=168.0
Q ss_pred ccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHHH
Q 047662 50 VNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQEL 129 (301)
Q Consensus 50 ~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~ 129 (301)
.+..+..+.+.|+++...++++++++||+...... ...|.....++++|||||||......+.+.++
T Consensus 180 ~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~-------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 246 (392)
T TIGR01426 180 RDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKE-------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTC 246 (392)
T ss_pred cCcEEEeCChHhCCCccccCCCeEEECCCCCCccc-------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHH
Confidence 34467888888887644567799999998764321 01266656677899999999866666788889
Q ss_pred HHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCccc
Q 047662 130 AFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLC 209 (301)
Q Consensus 130 ~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~ 209 (301)
++++...+.+++|.++..... +.+ ...++|+.+.+|+||..+|.++++ ||||||+||++||+++|+|+|+
T Consensus 247 ~~al~~~~~~~i~~~g~~~~~-------~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~ 316 (392)
T TIGR01426 247 VEAFRDLDWHVVLSVGRGVDP-------ADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVA 316 (392)
T ss_pred HHHHhcCCCeEEEEECCCCCh-------hHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEe
Confidence 999999999999988754110 111 123567888999999999999887 9999999999999999999999
Q ss_pred CCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHH
Q 047662 210 WPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLE 289 (301)
Q Consensus 210 ~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~ 289 (301)
+|...||..|++++++. |+|+.+. ...++.++|.++|++++.|++|+++++++++.++.. + ....+.++|+
T Consensus 317 ~p~~~dq~~~a~~l~~~-g~g~~l~---~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~---~--~~~~aa~~i~ 387 (392)
T TIGR01426 317 VPQGADQPMTARRIAEL-GLGRHLP---PEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREA---G--GARRAADEIE 387 (392)
T ss_pred cCCcccHHHHHHHHHHC-CCEEEec---cccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc---C--CHHHHHHHHH
Confidence 99999999999999884 9999986 356899999999999999999999999999998862 3 3355556665
Q ss_pred HH
Q 047662 290 WL 291 (301)
Q Consensus 290 ~~ 291 (301)
.+
T Consensus 388 ~~ 389 (392)
T TIGR01426 388 GF 389 (392)
T ss_pred Hh
Confidence 54
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=6.5e-27 Score=221.00 Aligned_cols=169 Identities=18% Similarity=0.244 Sum_probs=146.0
Q ss_pred CCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCc
Q 047662 106 QPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSI 185 (301)
Q Consensus 106 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v 185 (301)
.++++||||+||.... .+.++.+++++...+.++|...+.. .. .. ..+++|+.+.+|+||..+|.++++
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~-~~--------~~~p~n~~v~~~~p~~~~l~~ad~ 303 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RD-TL--------VNVPDNVIVADYVPQLELLPRADA 303 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cc-cc--------ccCCCceEEecCCCHHHHhhhcCE
Confidence 4567999999998765 7888899999999999999988652 00 11 223567899999999999999999
Q ss_pred ceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHH
Q 047662 186 ACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALE 265 (301)
Q Consensus 186 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~ 265 (301)
||||||+||++||+++|||+|++|...||+.||.++++. |+|+.+.. ..++.+.++++|+++|+|+.|++++++
T Consensus 304 --vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~---~~l~~~~l~~av~~vL~~~~~~~~~~~ 377 (406)
T COG1819 304 --VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPF---EELTEERLRAAVNEVLADDSYRRAAER 377 (406)
T ss_pred --EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCc---ccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999999999999999999999885 99999973 678999999999999999999999999
Q ss_pred HHHHHHhHhhcCCChHHHHHHHHHHHHhccc
Q 047662 266 LKEKAMSSIREGGSSRKTFQNFLEWLIFFNA 296 (301)
Q Consensus 266 l~~~~~~~~~~~gss~~~l~~~v~~~~~~~~ 296 (301)
+++.+++. +| .+.+.+++++.....+
T Consensus 378 ~~~~~~~~---~g--~~~~a~~le~~~~~~~ 403 (406)
T COG1819 378 LAEEFKEE---DG--PAKAADLLEEFAREKK 403 (406)
T ss_pred HHHHhhhc---cc--HHHHHHHHHHHHhccc
Confidence 99999984 44 6778888888665543
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.93 E-value=3.5e-25 Score=209.09 Aligned_cols=207 Identities=15% Similarity=0.159 Sum_probs=151.0
Q ss_pred EEEcCcccccchhhhcCCCCCCCC-ccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCC-HHHHHHHH
Q 047662 53 QLCHSTYELESEAFTVVPELLPIG-PLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILD-QVQFQELA 130 (301)
Q Consensus 53 vl~ns~~~le~~~~~~~~~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~-~~~~~~~~ 130 (301)
.+....+.+.+...++.++..++| ++...+.. ...+.++..|++. .+++|||+|||..... .+.+..++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~ 262 (401)
T cd03784 192 ELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYN-------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDV 262 (401)
T ss_pred EEEecCcccCCCCCCccccCcEeCCCCCCCCCC-------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHH
Confidence 344444444433234555666665 33322221 1234556677765 4569999999986543 45677888
Q ss_pred HHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 131 FGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 131 ~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
+++...+.++||+++.... .. ...++|+.+.+|+||..+|.|+++ ||||||+||++||+++|||+|++
T Consensus 263 ~a~~~~~~~~i~~~g~~~~-------~~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~ 330 (401)
T cd03784 263 EAVATLGQRAILSLGWGGL-------GA---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVV 330 (401)
T ss_pred HHHHHcCCeEEEEccCccc-------cc---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEee
Confidence 9998889999999986511 00 123578899999999999999888 99999999999999999999999
Q ss_pred CCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHH
Q 047662 211 PYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEW 290 (301)
Q Consensus 211 P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~ 290 (301)
|+..||+.||+++++. |+|+.+.. ..++.++|.++|++++++ +++++++++++.+++ ......+.++|+.
T Consensus 331 P~~~dQ~~~a~~~~~~-G~g~~l~~---~~~~~~~l~~al~~~l~~-~~~~~~~~~~~~~~~-----~~g~~~~~~~ie~ 400 (401)
T cd03784 331 PFFGDQPFWAARVAEL-GAGPALDP---RELTAERLAAALRRLLDP-PSRRRAAALLRRIRE-----EDGVPSAADVIER 400 (401)
T ss_pred CCCCCcHHHHHHHHHC-CCCCCCCc---ccCCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHh-----ccCHHHHHHHHhh
Confidence 9999999999999885 99999973 458999999999999975 466667777666654 2334555555553
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.64 E-value=1.8e-15 Score=140.92 Aligned_cols=145 Identities=14% Similarity=0.130 Sum_probs=107.5
Q ss_pred CCCCceEEEEecCCccCCH-HHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeeccc-chh-hhcc
Q 047662 105 QQPSSVLYAAFGSFTILDQ-VQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWA-PQQ-KVLN 181 (301)
Q Consensus 105 ~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~-pq~-~iL~ 181 (301)
.+++++|+|..||+..... +.+.+++..+.. +..++|.++.+. +. ..... ..+..+.+|+ +++ .++.
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~~-~~~~~-~~~~~~~~f~~~~m~~~~~ 251 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------LD-DSLQN-KEGYRQFEYVHGELPDILA 251 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------HH-HHHhh-cCCcEEecchhhhHHHHHH
Confidence 3456799999999865333 445555555532 478999998651 10 00001 1233455777 434 5899
Q ss_pred CCCcceEEecCCchhHHHHHHhCCCcccCCCC-----CchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 182 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF-----AEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
++++ +|||||.+|+.|++++|+|+|.+|+. .||..||+.+++. |+|..+. ...++.+.+.+++.+++.|
T Consensus 252 ~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~---~~~~~~~~l~~~l~~ll~~ 325 (352)
T PRK12446 252 ITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLY---EEDVTVNSLIKHVEELSHN 325 (352)
T ss_pred hCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcc---hhcCCHHHHHHHHHHHHcC
Confidence 9998 99999999999999999999999985 4899999999985 9999997 4778999999999999988
Q ss_pred h-HHHHHHHH
Q 047662 257 Q-DFKARALE 265 (301)
Q Consensus 257 ~-~~r~~a~~ 265 (301)
+ .+++++++
T Consensus 326 ~~~~~~~~~~ 335 (352)
T PRK12446 326 NEKYKTALKK 335 (352)
T ss_pred HHHHHHHHHH
Confidence 6 55555444
No 29
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.50 E-value=8.8e-16 Score=128.00 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=95.4
Q ss_pred eEEEEecCCccC-CHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccc-hhhhccCCCc
Q 047662 110 VLYAAFGSFTIL-DQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAP-QQKVLNHPSI 185 (301)
Q Consensus 110 vvyvs~GS~~~~-~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~p-q~~iL~h~~v 185 (301)
+|+|++||.... -.+.+..+...+.. ....|++.+|... .......+ ...+.++.+.+|.+ ...++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~----~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNN----YEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCE----CHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCc----HHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 489999987432 11222233333332 2578888888651 11111111 11125678889999 5569999998
Q ss_pred ceEEecCCchhHHHHHHhCCCcccCCCCC----chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHH
Q 047662 186 ACFLSHCGWNSTMEGVSNGIPFLCWPYFA----EQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 186 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~----DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~ 259 (301)
+|||||.+|++|++++|+|+|++|... +|..|+..+++. |+|+.+. ....+.+.|.++|.+++.++..
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~---~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLD---ESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSE---CCC-SCCCHHHHHHCHCCCHH-
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccC---cccCCHHHHHHHHHHHHcCcHH
Confidence 999999999999999999999999988 999999999986 9999997 3566788999999999988754
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=6.3e-13 Score=123.44 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=106.0
Q ss_pred CCceEEEEecCCcc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhc-CC-ceeecccchhh-hccC
Q 047662 107 PSSVLYAAFGSFTI-LDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVS-AR-GRMIGWAPQQK-VLNH 182 (301)
Q Consensus 107 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~-~~-~~v~~~~pq~~-iL~h 182 (301)
++++|+|..||+.. .-++.+.+....+.+ ++.+++.++.+. .+....... .+ ..+.+|..++. ++..
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 56799999999854 334555566666654 678888887651 112222222 22 56678888776 8888
Q ss_pred CCcceEEecCCchhHHHHHHhCCCcccCCCC----CchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 183 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----AEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 183 ~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~----~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
+++ +||++|.+|+.|++++|+|+|.+|+- .||..||+.+++. |.|..+. +..++.+++.+.|.+++.++
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~---~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIR---QSELTPEKLAELILRLLSNP 325 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEec---cccCCHHHHHHHHHHHhcCH
Confidence 888 99999999999999999999999983 4899999999997 9999998 57799999999999999874
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.44 E-value=8.8e-13 Score=120.66 Aligned_cols=161 Identities=15% Similarity=0.219 Sum_probs=113.7
Q ss_pred cccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHH
Q 047662 47 MRAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQF 126 (301)
Q Consensus 47 ~~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~ 126 (301)
+..++..|.-++. .. .....++.++||+....... . . ..+++.|+|+||.....
T Consensus 152 ~~~~~~~l~~~~~-~~---~~~~~~~~~~~p~~~~~~~~--------~--------~-~~~~~~iLv~~gg~~~~----- 205 (318)
T PF13528_consen 152 FPPADRRLALSFY-PP---LPPFFRVPFVGPIIRPEIRE--------L--------P-PEDEPKILVYFGGGGPG----- 205 (318)
T ss_pred CCcccceecCCcc-cc---ccccccccccCchhcccccc--------c--------C-CCCCCEEEEEeCCCcHH-----
Confidence 4556666665554 11 22234577789888654321 0 0 12345799999986432
Q ss_pred HHHHHHHhhCC-CCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeeccc--chhhhccCCCcceEEecCCchhHHHHHHh
Q 047662 127 QELAFGLELCN-RPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWA--PQQKVLNHPSIACFLSHCGWNSTMEGVSN 203 (301)
Q Consensus 127 ~~~~~al~~~~-~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~--pq~~iL~h~~v~~fItHgG~~s~~Eal~~ 203 (301)
.+++++...+ +.|++. +... .+...+|+.+.+|. ...++|..+++ +|||||.||++|++++
T Consensus 206 -~~~~~l~~~~~~~~~v~-g~~~------------~~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~ 269 (318)
T PF13528_consen 206 -DLIEALKALPDYQFIVF-GPNA------------ADPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALAL 269 (318)
T ss_pred -HHHHHHHhCCCCeEEEE-cCCc------------ccccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHc
Confidence 5566665555 666655 5431 00114677788775 34558988888 9999999999999999
Q ss_pred CCCcccCCC--CCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 204 GIPFLCWPY--FAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 204 GvP~i~~P~--~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
|+|+|++|. +.||..||+.+++. |+|+.+. ...++++.|+++|+++
T Consensus 270 g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~---~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 270 GKPALVIPRPGQDEQEYNARKLEEL-GLGIVLS---QEDLTPERLAEFLERL 317 (318)
T ss_pred CCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcc---cccCCHHHHHHHHhcC
Confidence 999999999 78999999999885 9999997 3778999999998764
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.40 E-value=1.3e-12 Score=120.32 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=89.2
Q ss_pred CceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccc--hhhhccCCCc
Q 047662 108 SSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAP--QQKVLNHPSI 185 (301)
Q Consensus 108 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~p--q~~iL~h~~v 185 (301)
++.|+|.+||.. ...++++|...+. +.+++.... ...+ ..++|+.+.+|.| ....|..+++
T Consensus 188 ~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~~------~~~~----~~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSYE------VAKN----SYNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCCC------CCcc----ccCCCEEEEECChHHHHHHHHhCCE
Confidence 457888888853 2345666655543 233333220 0111 2246778889987 3346777777
Q ss_pred ceEEecCCchhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 186 ACFLSHCGWNSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 186 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
+|||||.+|++||+++|+|+|++|..+ ||..||+.+++. |+|+.++. ..+ ++.+++.++++|+.|.
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~---~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEY---KEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcCh---hhH---HHHHHHHhcccccccc
Confidence 999999999999999999999999955 899999999985 99999963 333 5666777777776653
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.22 E-value=9.8e-11 Score=108.90 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=81.3
Q ss_pred ceeecccc-hhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCC----CCchhhhHHhhhceeeeEEEeecCCCCCCC
Q 047662 168 GRMIGWAP-QQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY----FAEQFLNEKYICDIWKVGLRFDKNESGIIT 242 (301)
Q Consensus 168 ~~v~~~~p-q~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~ 242 (301)
+.+.+|.. ...++..+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+.+. |+|+.+.. .+++
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~---~~~~ 310 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQ---SDLT 310 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEc---ccCC
Confidence 56678884 4469999998 9999999999999999999999997 46899999999886 99999973 5578
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHH
Q 047662 243 REEIKNKVDQVLGHQDFKARALELKEK 269 (301)
Q Consensus 243 ~~~l~~av~~vl~~~~~r~~a~~l~~~ 269 (301)
.+.+.++++++++|++++++..+-+..
T Consensus 311 ~~~l~~~i~~ll~~~~~~~~~~~~~~~ 337 (357)
T PRK00726 311 PEKLAEKLLELLSDPERLEAMAEAARA 337 (357)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHh
Confidence 999999999999998887666555444
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.21 E-value=7.9e-11 Score=108.87 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=99.9
Q ss_pred CCCceEEEEecCCccCCH-HHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeeccc-chhhhccCC
Q 047662 106 QPSSVLYAAFGSFTILDQ-VQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWA-PQQKVLNHP 183 (301)
Q Consensus 106 ~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~-pq~~iL~h~ 183 (301)
+++.+|++..|+...... +.+.+.+..+...+..+++.++.. ..+.+.+.. +...+++.+.+|. ....+|..+
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g----~~~~l~~~~-~~~~~~v~~~g~~~~~~~~l~~a 253 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG----DLEEVKKAY-EELGVNYEVFPFIDDMAAAYAAA 253 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc----cHHHHHHHH-hccCCCeEEeehhhhHHHHHHhc
Confidence 344466676666532211 222333444443344556666643 111111111 1113577888887 445589888
Q ss_pred CcceEEecCCchhHHHHHHhCCCcccCCC----CCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHH
Q 047662 184 SIACFLSHCGWNSTMEGVSNGIPFLCWPY----FAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 184 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~ 259 (301)
++ +|+++|.++++||+++|+|+|+.|. ..+|..|+..+.+. |+|+.+.. ...+.+++.++|++++.+++.
T Consensus 254 d~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~---~~~~~~~l~~~i~~ll~~~~~ 327 (350)
T cd03785 254 DL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQ---EELTPERLAAALLELLSDPER 327 (350)
T ss_pred CE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEec---CCCCHHHHHHHHHHHhcCHHH
Confidence 88 9999999999999999999999986 46788999999885 99999963 346899999999999988866
Q ss_pred HHHHHH
Q 047662 260 KARALE 265 (301)
Q Consensus 260 r~~a~~ 265 (301)
+++..+
T Consensus 328 ~~~~~~ 333 (350)
T cd03785 328 LKAMAE 333 (350)
T ss_pred HHHHHH
Confidence 555443
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.08 E-value=2.2e-09 Score=101.49 Aligned_cols=163 Identities=12% Similarity=0.225 Sum_probs=107.1
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCchhhhh--cCCceeecccchhh-hcc
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGFQERV--SARGRMIGWAPQQK-VLN 181 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~~pq~~-iL~ 181 (301)
++++|+++.|+... ...+..+++++.. .+..++++.+.+. .+-+.+.+.. .+++.+.+|..+.. ++.
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 45688888898752 1334455555422 3456666666440 0111121111 24677779987654 888
Q ss_pred CCCcceEEecCCchhHHHHHHhCCCcccC-CCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 182 HPSIACFLSHCGWNSTMEGVSNGIPFLCW-PYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
.+++ ||+..|..|+.||+++|+|+|+. |.-++|..|+..+.+. |+|+... +.+++.++|.++++|++.+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~-------~~~~l~~~i~~ll~~~~~~ 342 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD-------TPEEAIKIVASLTNGNEQL 342 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC-------CHHHHHHHHHHHhcCHHHH
Confidence 8888 99998889999999999999998 6667777899999886 9998773 6889999999999887544
Q ss_pred HHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 261 ARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 261 ~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
++ +++.+++. .++.+....++.+++.+
T Consensus 343 ~~---m~~~~~~~-~~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 343 TN---MISTMEQD-KIKYATQTICRDLLDLI 369 (391)
T ss_pred HH---HHHHHHHh-cCCCCHHHHHHHHHHHh
Confidence 33 33333332 22344444444444433
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.02 E-value=1.2e-08 Score=96.19 Aligned_cols=142 Identities=14% Similarity=0.133 Sum_probs=94.0
Q ss_pred CCCceEEEEecCCccCCHH-HHHHHHHHHh-----hCCCCEEEEEcCCCCCCCCCCCCCchhhh-hcCCceeecccchhh
Q 047662 106 QPSSVLYAAFGSFTILDQV-QFQELAFGLE-----LCNRPFLWVVRPDITTDANDRYPDGFQER-VSARGRMIGWAPQQK 178 (301)
Q Consensus 106 ~~~~vvyvs~GS~~~~~~~-~~~~~~~al~-----~~~~~~iw~~~~~~~~~~~~~lp~~~~~~-~~~~~~v~~~~pq~~ 178 (301)
+++++|++..|+....... .+..+...+. ..+..+++++|.+. .+-+.+.+. ...++.+.+|.++..
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~ 277 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNME 277 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHH
Confidence 3455777777765432222 2223322221 13355677776541 010111111 124567789988665
Q ss_pred -hccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchh-hhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 179 -VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQF-LNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 179 -iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~-~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
++..+++ ||+.+|.++++||+++|+|+|+.+....|. .|+..+.+. |.|+.+. +.+++.++|.+++.+
T Consensus 278 ~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~-------~~~~la~~i~~ll~~ 347 (382)
T PLN02605 278 EWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE-------SPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC-------CHHHHHHHHHHHHcC
Confidence 8888888 999999999999999999999998766665 699988875 9998662 789999999999987
Q ss_pred -hHHHHHH
Q 047662 257 -QDFKARA 263 (301)
Q Consensus 257 -~~~r~~a 263 (301)
++.+++.
T Consensus 348 ~~~~~~~m 355 (382)
T PLN02605 348 KSDELEAM 355 (382)
T ss_pred CHHHHHHH
Confidence 6544443
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.00 E-value=6.4e-09 Score=97.63 Aligned_cols=141 Identities=15% Similarity=0.193 Sum_probs=99.8
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhh-CCCCEEEEEcCCCCCCCCCCCCCchhh---hhcCCceeecccchh-hhcc
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLEL-CNRPFLWVVRPDITTDANDRYPDGFQE---RVSARGRMIGWAPQQ-KVLN 181 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-~~~~~iw~~~~~~~~~~~~~lp~~~~~---~~~~~~~v~~~~pq~-~iL~ 181 (301)
++++|++..|+.... ..+..+++++.. .+.+++++.+.+. .+-+.+.+ ..++++.+.+|+++. .++.
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 445788877886532 234566777754 3566776666430 01111111 123467888999875 5899
Q ss_pred CCCcceEEecCCchhHHHHHHhCCCcccC-CCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 182 HPSIACFLSHCGWNSTMEGVSNGIPFLCW-PYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
.+++ +|+..|..+++||+++|+|+|+. |..+.+..|+..+.+. |+|+... +.+++.++|.+++.|++.+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~-------~~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR-------DDEEVFAKTEALLQDDMKL 342 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC-------CHHHHHHHHHHHHCCHHHH
Confidence 9888 99999999999999999999985 6667778899988775 9888663 5789999999999998765
Q ss_pred HHHHH
Q 047662 261 ARALE 265 (301)
Q Consensus 261 ~~a~~ 265 (301)
++..+
T Consensus 343 ~~m~~ 347 (380)
T PRK13609 343 LQMKE 347 (380)
T ss_pred HHHHH
Confidence 55443
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.89 E-value=2.2e-08 Score=92.37 Aligned_cols=85 Identities=19% Similarity=0.299 Sum_probs=70.4
Q ss_pred chhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCC---CchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHH
Q 047662 175 PQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---AEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVD 251 (301)
Q Consensus 175 pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~ 251 (301)
.-..+|..+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+. +.|..+.. ++.+.+++.++++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~---~~~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQ---KELLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEec---ccCCHHHHHHHHH
Confidence 34568989898 99999988999999999999999863 4788899999875 99998863 4567999999999
Q ss_pred HHhCChHHHHHHHH
Q 047662 252 QVLGHQDFKARALE 265 (301)
Q Consensus 252 ~vl~~~~~r~~a~~ 265 (301)
+++.|++.+++..+
T Consensus 317 ~ll~~~~~~~~~~~ 330 (348)
T TIGR01133 317 KLLLDPANLEAMAE 330 (348)
T ss_pred HHHcCHHHHHHHHH
Confidence 99999876655443
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.74 E-value=2.3e-08 Score=90.36 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=75.8
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCchhhhh--cCCceeecccchh-hhccCC
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGFQERV--SARGRMIGWAPQQ-KVLNHP 183 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~~pq~-~iL~h~ 183 (301)
+.|+|+||...... ....++++|.. .+.++.+++++.. ...+.+.+.. ..|+.+..+.+++ .+|..+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSN------PNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCC------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 46899998653322 34456666654 3457778887651 1122222221 3577888999987 599999
Q ss_pred CcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhh
Q 047662 184 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYI 223 (301)
Q Consensus 184 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~ 223 (301)
++ +||+|| +|++|+++.|+|+|++|...+|..||+.+
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~~ 279 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQL 279 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhhC
Confidence 98 999999 99999999999999999999999999753
No 40
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.74 E-value=3.7e-08 Score=93.02 Aligned_cols=171 Identities=12% Similarity=-0.024 Sum_probs=111.1
Q ss_pred CCCceEEEEecCCccCCHHHHHHHHHHHh---hC--CCCEEEEEcCCCCCCCCCCCCCchhhhhc--CCceeecccchhh
Q 047662 106 QPSSVLYAAFGSFTILDQVQFQELAFGLE---LC--NRPFLWVVRPDITTDANDRYPDGFQERVS--ARGRMIGWAPQQK 178 (301)
Q Consensus 106 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~---~~--~~~~iw~~~~~~~~~~~~~lp~~~~~~~~--~~~~v~~~~pq~~ 178 (301)
+++++|.+..||...--...+..+++++. +. +..+++.+..... ...-+.+.+... ..+.+..+ ....
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~-~~~~ 263 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR----RLQFEQIKAEYGPDLQLHLIDG-DARK 263 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh----HHHHHHHHHHhCCCCcEEEECc-hHHH
Confidence 45568888888864321333444554443 22 3345554432200 000011111111 12222222 3345
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccC----CCCC---------chhhhHHhhhceeeeEEEeecCCCCCCCHHH
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW----PYFA---------EQFLNEKYICDIWKVGLRFDKNESGIITREE 245 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~----P~~~---------DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~ 245 (301)
++..+++ ||+.+|..|+ |++++|+|+|++ |+.. .|..|+..++.+ ++...+. ...++++.
T Consensus 264 ~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~---q~~~~~~~ 336 (385)
T TIGR00215 264 AMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELL---QEECTPHP 336 (385)
T ss_pred HHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhc---CCCCCHHH
Confidence 8888888 9999999888 999999999999 7732 277799999886 8888875 57789999
Q ss_pred HHHHHHHHhCCh----HHHHHHHHHHHHHHhHhhcCCChHHHHHHHH
Q 047662 246 IKNKVDQVLGHQ----DFKARALELKEKAMSSIREGGSSRKTFQNFL 288 (301)
Q Consensus 246 l~~av~~vl~~~----~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v 288 (301)
|.+.+.+++.|+ +++++.++--..+++...++|.+.+....++
T Consensus 337 l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 337 LAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 999999999999 8888877777777777777777765555444
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.62 E-value=2e-07 Score=87.33 Aligned_cols=106 Identities=10% Similarity=0.026 Sum_probs=67.4
Q ss_pred hhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCC--------chhhh-----HHhhhceeeeEEEeecCCCCCCCH
Q 047662 177 QKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFA--------EQFLN-----EKYICDIWKVGLRFDKNESGIITR 243 (301)
Q Consensus 177 ~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~--------DQ~~N-----a~~~~~~~G~G~~l~~~~~~~~~~ 243 (301)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-.. +|..| +..+++. +++..+. ....+.
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~---~~~~~~ 328 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELL---QEEATP 328 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-Ccchhhc---CCCCCH
Confidence 458888888 9999998887 9999999999985432 22222 2233332 3333332 255689
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 244 EEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 244 ~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
+.+.+++.++++|++.+++..+-.+.+++.. ..+++ ..+.++|..+
T Consensus 329 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~-~~~~~~i~~~ 374 (380)
T PRK00025 329 EKLARALLPLLADGARRQALLEGFTELHQQL-RCGAD-ERAAQAVLEL 374 (380)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHH-HHHHHHHHHH
Confidence 9999999999999977765555444444433 34444 4444444443
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.57 E-value=6.9e-07 Score=84.67 Aligned_cols=187 Identities=13% Similarity=0.060 Sum_probs=109.9
Q ss_pred ccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHH
Q 047662 48 RAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQ 127 (301)
Q Consensus 48 ~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~ 127 (301)
+.|+.+++.+-..-+. .....-++.+||--..+.... .... . + .+++++|.+--||...-....+.
T Consensus 159 ~~a~~v~~~~~~t~~~-l~~~g~k~~~vGnPv~d~l~~--------~~~~--~-l--~~~~~~lllLpGSR~ae~~~~lp 224 (396)
T TIGR03492 159 RRCLAVFVRDRLTARD-LRRQGVRASYLGNPMMDGLEP--------PERK--P-L--LTGRFRIALLPGSRPPEAYRNLK 224 (396)
T ss_pred hhhCEEeCCCHHHHHH-HHHCCCeEEEeCcCHHhcCcc--------cccc--c-c--CCCCCEEEEECCCCHHHHHccHH
Confidence 4566776655332221 112223778888555443211 0000 0 1 22345888989997322222333
Q ss_pred HHHHHHhh----CCCCEEEEEcCCCCCCCCCCCCCchhhhh-------------------cCCceeecccch-hhhccCC
Q 047662 128 ELAFGLEL----CNRPFLWVVRPDITTDANDRYPDGFQERV-------------------SARGRMIGWAPQ-QKVLNHP 183 (301)
Q Consensus 128 ~~~~al~~----~~~~~iw~~~~~~~~~~~~~lp~~~~~~~-------------------~~~~~v~~~~pq-~~iL~h~ 183 (301)
.+++++.. .+..|++.+.++.. .+.+.+.. .+++.+..+..+ ..++..+
T Consensus 225 ~~l~al~~L~~~~~~~~v~~~~~~~~-------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~A 297 (396)
T TIGR03492 225 LLLRALEALPDSQPFVFLAAIVPSLS-------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWA 297 (396)
T ss_pred HHHHHHHHHhhCCCeEEEEEeCCCCC-------HHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhC
Confidence 44444433 36678888743310 01111100 012344445433 4588888
Q ss_pred CcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhce---eeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 184 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDI---WKVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 184 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~---~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
++ +|+.+|..| .|+++.|+|+|.+|.-..|. |+..+++. .|.++.+. ..+.+.+.+++.++++|++.+
T Consensus 298 Dl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~-----~~~~~~l~~~l~~ll~d~~~~ 368 (396)
T TIGR03492 298 DL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA-----SKNPEQAAQVVRQLLADPELL 368 (396)
T ss_pred CE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC-----CCCHHHHHHHHHHHHcCHHHH
Confidence 98 999999777 99999999999999877786 98876541 16666663 234589999999999998766
Q ss_pred HHHH
Q 047662 261 ARAL 264 (301)
Q Consensus 261 ~~a~ 264 (301)
++..
T Consensus 369 ~~~~ 372 (396)
T TIGR03492 369 ERCR 372 (396)
T ss_pred HHHH
Confidence 5544
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.53 E-value=9.9e-06 Score=73.92 Aligned_cols=156 Identities=12% Similarity=0.138 Sum_probs=95.5
Q ss_pred ceEEEEecCCcc-CCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhh---hccCC
Q 047662 109 SVLYAAFGSFTI-LDQVQFQELAFGLELC-NRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQK---VLNHP 183 (301)
Q Consensus 109 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~---iL~h~ 183 (301)
..+++..|+... ...+.+.+++..+... +..++ .++.... .+.+. ...+++.+.+|+++.+ ++..+
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~-i~G~~~~-------~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLV-IVGDGPA-------RARLE-ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEE-EEeCCch-------HHHHh-ccCCcEEEEeccCHHHHHHHHHhC
Confidence 356677787643 2334444555554332 34444 4443210 01111 2346778889988765 78888
Q ss_pred CcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHH
Q 047662 184 SIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 184 ~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~ 259 (301)
++ +|.++. .++++||+++|+|+|+.+..+ +...+.+. +.|..+. .-+.+++.+++.+++.|++.
T Consensus 268 d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~-----~~~~~~l~~~i~~l~~~~~~ 335 (364)
T cd03814 268 DV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVE-----PGDAEAFAAALAALLADPEL 335 (364)
T ss_pred CE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcC-----CCCHHHHHHHHHHHHcCHHH
Confidence 88 776654 478999999999999988654 44556554 8888874 24678899999999999876
Q ss_pred HHHHHHHHHHHHhHhhcCCChHHHHHHHHH
Q 047662 260 KARALELKEKAMSSIREGGSSRKTFQNFLE 289 (301)
Q Consensus 260 r~~a~~l~~~~~~~~~~~gss~~~l~~~v~ 289 (301)
+++..+-+....+ ..+.....+++++
T Consensus 336 ~~~~~~~~~~~~~----~~~~~~~~~~~~~ 361 (364)
T cd03814 336 RRRMAARARAEAE----RRSWEAFLDNLLE 361 (364)
T ss_pred HHHHHHHHHHHHh----hcCHHHHHHHHHH
Confidence 5554433333221 2344444444444
No 44
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.39 E-value=6.3e-06 Score=74.99 Aligned_cols=185 Identities=12% Similarity=0.083 Sum_probs=121.5
Q ss_pred cccEEEEcCcccccchhhhc------CCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCC
Q 047662 49 AVNFQLCHSTYELESEAFTV------VPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILD 122 (301)
Q Consensus 49 ~~~~vl~ns~~~le~~~~~~------~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~ 122 (301)
.-|.|++-..|.+-.+...+ ..++.|+|-+ ..+... . +.+ |... +++-.|+||-|-.. ..
T Consensus 167 ~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~----~--~~p-----~~~~-pE~~~Ilvs~GGG~-dG 232 (400)
T COG4671 167 FYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPH----L--PLP-----PHEA-PEGFDILVSVGGGA-DG 232 (400)
T ss_pred hheEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcC----C--CCC-----CcCC-CccceEEEecCCCh-hh
Confidence 45889888888875442222 1378999988 322110 0 010 1111 33447888887643 24
Q ss_pred HHHHHHHHHHHhh-CCCC--EEEEEcCCCCCCCCCCCCCchhhhhc--CCceeecccchhh-hccCCCcceEEecCCchh
Q 047662 123 QVQFQELAFGLEL-CNRP--FLWVVRPDITTDANDRYPDGFQERVS--ARGRMIGWAPQQK-VLNHPSIACFLSHCGWNS 196 (301)
Q Consensus 123 ~~~~~~~~~al~~-~~~~--~iw~~~~~~~~~~~~~lp~~~~~~~~--~~~~v~~~~pq~~-iL~h~~v~~fItHgG~~s 196 (301)
.+.+...+.|-.. .+.+ .+.++++.+...+. +.+....+ +++.+..|..+.. +|..+.. +|+-||.||
T Consensus 233 ~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r----~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNT 306 (400)
T COG4671 233 AELIETALAAAQLLAGLNHKWLIVTGPFMPEAQR----QKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNT 306 (400)
T ss_pred HHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHH----HHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchh
Confidence 4555555555432 3333 45556665321110 11222223 6677888876655 7777777 999999999
Q ss_pred HHHHHHhCCCcccCCCCC---chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 197 TMEGVSNGIPFLCWPYFA---EQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 197 ~~Eal~~GvP~i~~P~~~---DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
++|-+.+|+|.+++|... ||-.-|+++++ +|+.=++.. ..+++..+.++|...++-+
T Consensus 307 vCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~p---e~lt~~~La~al~~~l~~P 366 (400)
T COG4671 307 VCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLP---ENLTPQNLADALKAALARP 366 (400)
T ss_pred hhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCc---ccCChHHHHHHHHhcccCC
Confidence 999999999999999863 89999999987 698888874 7789999999999988634
No 45
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.19 E-value=5.4e-06 Score=66.48 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=75.5
Q ss_pred eEEEEecCCcc--C-CHHHHHHHHHHHhhCCC-CEEEEEcCCCCCCCCCCCCCchhhhh-cCCcee--ecccch-hhhcc
Q 047662 110 VLYAAFGSFTI--L-DQVQFQELAFGLELCNR-PFLWVVRPDITTDANDRYPDGFQERV-SARGRM--IGWAPQ-QKVLN 181 (301)
Q Consensus 110 vvyvs~GS~~~--~-~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~lp~~~~~~~-~~~~~v--~~~~pq-~~iL~ 181 (301)
.+||+-||..- + +--.-+++.+.|.+.|+ +.|..++.+. ...++...... .+...+ .+|.|. .+..+
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-----~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~ 79 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-----PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIR 79 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-----cCCCCHHHhhcccCCeEEEEEecCccHHHHHh
Confidence 79999999741 0 00112345566777775 5666676551 11223322111 122222 367786 45677
Q ss_pred CCCcceEEecCCchhHHHHHHhCCCcccCCC----CCchhhhHHhhhceeeeEEEe
Q 047662 182 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPY----FAEQFLNEKYICDIWKVGLRF 233 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~Na~~~~~~~G~G~~l 233 (301)
.+++ +|+|+|+||++|.+..|+|.|+++- -.+|-.-|..+++. |-=+.-
T Consensus 80 ~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C 132 (170)
T KOG3349|consen 80 SADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYC 132 (170)
T ss_pred hccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEe
Confidence 7777 9999999999999999999999994 46899999999775 654444
No 46
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.08 E-value=0.00043 Score=62.32 Aligned_cols=87 Identities=15% Similarity=0.230 Sum_probs=63.8
Q ss_pred cCCceeecccchhh---hccCCCcceEEe----cCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fIt----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
.+++.+.+++++.+ ++..+++ +|. -|..++++||+++|+|+|+.+. ......+.+. +.|+.+..
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~-- 325 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPP-- 325 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCC--
Confidence 46778889987554 7888887 553 2456799999999999999776 3344555443 77887752
Q ss_pred CCCCCHHHHHHHHHHHhCChHHHHHH
Q 047662 238 SGIITREEIKNKVDQVLGHQDFKARA 263 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~~~r~~a 263 (301)
.+.+++.+++.+++.+++.++..
T Consensus 326 ---~~~~~l~~~i~~~~~~~~~~~~~ 348 (374)
T cd03801 326 ---GDPEALAEAILRLLDDPELRRRL 348 (374)
T ss_pred ---CCHHHHHHHHHHHHcChHHHHHH
Confidence 35899999999999988655443
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.00 E-value=9.7e-05 Score=67.46 Aligned_cols=138 Identities=16% Similarity=0.120 Sum_probs=82.5
Q ss_pred CceEEEEecCCcc-CCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCCCchhh----hhcCCceeecccchhh---
Q 047662 108 SSVLYAAFGSFTI-LDQVQFQELAFGLELC-NRPFLWVVRPDITTDANDRYPDGFQE----RVSARGRMIGWAPQQK--- 178 (301)
Q Consensus 108 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~lp~~~~~----~~~~~~~v~~~~pq~~--- 178 (301)
++.+++..|+... ...+.+.+.+..+... +..++ .++... ..+.+.+ ...+++.+.+++++.+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~-i~G~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 290 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFL-IVGDGP-------EKEELKELAKALGLDNVTFLGRVPKEELPE 290 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEE-EeCCcc-------cHHHHHHHHHHcCCCcEEEeCCCChHHHHH
Confidence 3467777888643 2334444444444333 44443 444331 1111211 1235677888888654
Q ss_pred hccCCCcceEEecCC-------chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHH
Q 047662 179 VLNHPSIACFLSHCG-------WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVD 251 (301)
Q Consensus 179 iL~h~~v~~fItHgG-------~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~ 251 (301)
++..+++.++-++.+ .++++||+++|+|+|+.+..+.+.. +.+. +.|..+.. -+.+++.++|.
T Consensus 291 ~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~-~~g~~~~~-----~~~~~l~~~i~ 360 (394)
T cd03794 291 LLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEA-GAGLVVPP-----GDPEALAAAIL 360 (394)
T ss_pred HHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccC-CcceEeCC-----CCHHHHHHHHH
Confidence 678888833323321 3347999999999999988665443 2232 67777742 37899999999
Q ss_pred HHhCChHHHHHH
Q 047662 252 QVLGHQDFKARA 263 (301)
Q Consensus 252 ~vl~~~~~r~~a 263 (301)
+++.|++.+++.
T Consensus 361 ~~~~~~~~~~~~ 372 (394)
T cd03794 361 ELLDDPEERAEM 372 (394)
T ss_pred HHHhChHHHHHH
Confidence 999888655443
No 48
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.98 E-value=0.0009 Score=60.54 Aligned_cols=190 Identities=14% Similarity=0.068 Sum_probs=102.4
Q ss_pred HhcccccEEEEcCcccccchhhhc---CCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCcc-
Q 047662 45 RAMRAVNFQLCHSTYELESEAFTV---VPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTI- 120 (301)
Q Consensus 45 ~~~~~~~~vl~ns~~~le~~~~~~---~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~- 120 (301)
..++.+|.+++.|...-+.- ... ..++..++......... +.......-+. ......+++..|+...
T Consensus 144 ~~~~~~d~ii~~s~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~i~~~g~~~~~ 214 (377)
T cd03798 144 RALRRADAVIAVSEALADEL-KALGIDPEKVTVIPNGVDTERFS-------PADRAEARKLG-LPEDKKVILFVGRLVPR 214 (377)
T ss_pred HHHhcCCeEEeCCHHHHHHH-HHhcCCCCceEEcCCCcCcccCC-------CcchHHHHhcc-CCCCceEEEEeccCccc
Confidence 34578899999887665542 222 12444444333221110 11100000011 1223467777787643
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhh-----hcCCceeecccchhh---hccCCCcceEEe--
Q 047662 121 LDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQER-----VSARGRMIGWAPQQK---VLNHPSIACFLS-- 190 (301)
Q Consensus 121 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~-----~~~~~~v~~~~pq~~---iL~h~~v~~fIt-- 190 (301)
...+.+-+.+..+...+..+.+.+-+.. . ..+.+.+. ..+++.+.+++++.+ ++..+++.++.+
T Consensus 215 k~~~~li~~~~~~~~~~~~~~l~i~g~~---~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 215 KGIDYLIEALARLLKKRPDVHLVIVGDG---P---LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEEEcCC---c---chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 2233333444444333233444332220 0 01111111 246778889998754 677888732222
Q ss_pred cCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHH
Q 047662 191 HCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 191 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~ 259 (301)
-+..++++||+++|+|+|+-+..+ ....+.+. +.|..+. .-+.+++.+++.+++.+++.
T Consensus 289 ~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~-~~g~~~~-----~~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 289 EGFGLVLLEAMACGLPVVATDVGG----IPEIITDG-ENGLLVP-----PGDPEALAEAILRLLADPWL 347 (377)
T ss_pred ccCChHHHHHHhcCCCEEEecCCC----hHHHhcCC-cceeEEC-----CCCHHHHHHHHHHHhcCcHH
Confidence 245678999999999999876543 34445553 6677774 24789999999999988864
No 49
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.96 E-value=0.0001 Score=68.01 Aligned_cols=135 Identities=10% Similarity=0.140 Sum_probs=85.8
Q ss_pred EEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchh---hhccCCCcce
Q 047662 111 LYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQ---KVLNHPSIAC 187 (301)
Q Consensus 111 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~---~iL~h~~v~~ 187 (301)
.++..|+... ...+..+++++...+.+++++-++. ..+.+.+...+++.+.+++|+. .+++.+++-+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 3455677643 2335667777777677755443322 1122223446788899999975 3788888833
Q ss_pred EEecCCc-hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh-HHHHHHHH
Q 047662 188 FLSHCGW-NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ-DFKARALE 265 (301)
Q Consensus 188 fItHgG~-~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~-~~r~~a~~ 265 (301)
+-+.-|. .+++||+++|+|+|+....+ ....+.+. +.|+.+.. -+.+++.++|.++++|+ ..++++++
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~-----~~~~~la~~i~~l~~~~~~~~~~~~~ 336 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE-----QTVESLAAAVERFEKNEDFDPQAIRA 336 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC-----CCHHHHHHHHHHHHhCcccCHHHHHH
Confidence 3333333 46789999999999986543 23344453 67888842 36888999999999887 44444433
No 50
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.94 E-value=0.00033 Score=66.59 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=74.6
Q ss_pred CCceeecccchhh---hccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCC
Q 047662 166 ARGRMIGWAPQQK---VLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNES 238 (301)
Q Consensus 166 ~~~~v~~~~pq~~---iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~ 238 (301)
+++.+.+|+++.+ ++..+++.+|+...- .++++||+++|+|+|+....+ ....+.+. +.|..+.
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~-~~G~l~~---- 359 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNG-GNGLLLS---- 359 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCC-CcEEEeC----
Confidence 4567789999764 455444445776543 568999999999999865433 44555443 4888884
Q ss_pred CCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHH
Q 047662 239 GIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFL 288 (301)
Q Consensus 239 ~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v 288 (301)
..-+.+++.++|.++++|++.+++ +++..++.+.+.-+...+..+|+
T Consensus 360 ~~~~~~~la~~I~~ll~~~~~~~~---m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 360 KDPTPNELVSSLSKFIDNEEEYQT---MREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCHHHHHHHHHHHHhCHHHHHH---HHHHHHHHHHHHcCHHHhHHHhc
Confidence 334789999999999988765443 33444444445666666666654
No 51
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.93 E-value=6.1e-05 Score=70.34 Aligned_cols=136 Identities=12% Similarity=0.108 Sum_probs=82.4
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHhhC-----CCCEEEEEcCCCCCCCCCCCCCchhhhh--cCCceeecccchh---h
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLELC-----NRPFLWVVRPDITTDANDRYPDGFQERV--SARGRMIGWAPQQ---K 178 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~~pq~---~ 178 (301)
.+++++++-.... .+.+..+++++... +.++++...++. ..-..+.+.. .+++.+.+.++.. .
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP------VVREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------HHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 3566655432111 13466677766442 455666544330 0001111111 2466776655543 4
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChH
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQD 258 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~ 258 (301)
++.++++ +|+-.|. .+.||+++|+|+|.++-.+++.. .+ +. |.++.+. -+.++|.+++.+++.|++
T Consensus 271 ~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e---~~-~~-g~~~lv~------~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 271 LAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE---TV-EA-GTNKLVG------TDKENITKAAKRLLTDPD 336 (365)
T ss_pred HHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH---HH-hc-CceEEeC------CCHHHHHHHHHHHHhChH
Confidence 6777777 8887764 47999999999999976665542 22 33 6776663 268999999999999887
Q ss_pred HHHHHHH
Q 047662 259 FKARALE 265 (301)
Q Consensus 259 ~r~~a~~ 265 (301)
.+++..+
T Consensus 337 ~~~~~~~ 343 (365)
T TIGR00236 337 EYKKMSN 343 (365)
T ss_pred HHHHhhh
Confidence 7766544
No 52
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.92 E-value=0.0005 Score=62.40 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=83.8
Q ss_pred CCceEEEEecCCcc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhh---hccC
Q 047662 107 PSSVLYAAFGSFTI-LDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQK---VLNH 182 (301)
Q Consensus 107 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~---iL~h 182 (301)
....+++..|+... ...+.+.+.+..+...+..++ .++..... ..........+++.+.+|+++.+ ++..
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~-i~G~~~~~-----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELV-IVGNGLEL-----EEESYELEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEE-EEcCchhh-----hHHHHhhcCCCeEEEeCCCCHHHHHHHHHh
Confidence 34467777888643 223333333333333345544 44433100 00000001246778889987665 6888
Q ss_pred CCcceEEe--c--C-CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 183 PSIACFLS--H--C-GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 183 ~~v~~fIt--H--g-G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
+++ +|. + . ...+++||+++|+|+|+.+.. .....+.+. +.|..+.. -+.+++.+++.++++|+
T Consensus 263 ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 263 IDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPP-----GDAEDLAAALERLIDDP 330 (359)
T ss_pred CCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECC-----CCHHHHHHHHHHHHhCh
Confidence 888 553 2 2 344799999999999997653 345556553 57888852 35899999999999988
Q ss_pred HHHHHHHH
Q 047662 258 DFKARALE 265 (301)
Q Consensus 258 ~~r~~a~~ 265 (301)
+.++.+.+
T Consensus 331 ~~~~~~~~ 338 (359)
T cd03823 331 DLLERLRA 338 (359)
T ss_pred HHHHHHHH
Confidence 65444433
No 53
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.87 E-value=0.00072 Score=60.65 Aligned_cols=92 Identities=14% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCceeecccc-hhhhccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAP-QQKVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~p-q~~iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
.++.+.++.. -..++..+++ +|.... .++++||+++|+|+|+.+..+.+. .+.+....|..++ .
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~-----~ 303 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVP-----N 303 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeC-----C
Confidence 4455556533 2347888887 565432 578999999999999876544332 2223313788774 2
Q ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQDFKARALELKE 268 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~~~r~~a~~l~~ 268 (301)
-+.+++.++|.+++.|++.+++..+-+.
T Consensus 304 ~~~~~~~~~i~~ll~~~~~~~~~~~~~~ 331 (348)
T cd03820 304 GDVEALAEALLRLMEDEELRKRMGANAR 331 (348)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3679999999999999976665554443
No 54
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.82 E-value=9.1e-05 Score=68.72 Aligned_cols=136 Identities=13% Similarity=0.080 Sum_probs=83.8
Q ss_pred CceEEEEecCCccC-CHHHHHHHHHHHhhCCC-CEEEEEcCCCCCCCCCCCCCchhh---hh---cCCceeecccchh--
Q 047662 108 SSVLYAAFGSFTIL-DQVQFQELAFGLELCNR-PFLWVVRPDITTDANDRYPDGFQE---RV---SARGRMIGWAPQQ-- 177 (301)
Q Consensus 108 ~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~lp~~~~~---~~---~~~~~v~~~~pq~-- 177 (301)
+++|++++|..... ..+.+..+++++..... .+.++..... ...+.+.+ +. .+++.+.+..+..
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~------~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP------RTRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC------ChHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 45778888876533 45667778888765432 2333332220 01112221 11 2456665544433
Q ss_pred -hhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 178 -KVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 178 -~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
.++..+++ ||+..| +.+.||+++|+|+|.++.. |. +..+.+. |+++.+. . +.+++.++|.+++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~----~--~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG----T--DPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC----C--CHHHHHHHHHHHhcC
Confidence 35777888 999998 7778999999999998743 22 3344454 7776663 1 488999999999988
Q ss_pred hHHHHHH
Q 047662 257 QDFKARA 263 (301)
Q Consensus 257 ~~~r~~a 263 (301)
+..+++.
T Consensus 338 ~~~~~~~ 344 (363)
T cd03786 338 EFAYSLM 344 (363)
T ss_pred chhhhcC
Confidence 7655543
No 55
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.79 E-value=0.00038 Score=63.68 Aligned_cols=133 Identities=12% Similarity=0.108 Sum_probs=83.0
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCC-CCEEEEEcCCCCCCCCCCCCCchhh-----hhcCCceeecccchhh---hc
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCN-RPFLWVVRPDITTDANDRYPDGFQE-----RVSARGRMIGWAPQQK---VL 180 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~lp~~~~~-----~~~~~~~v~~~~pq~~---iL 180 (301)
.+++..|+... ...+..+++++.... ..+++.-.+. ..+.+.+ ...+|+.+.+|+|+.+ ++
T Consensus 192 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~ 261 (357)
T cd03795 192 PFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAALL 261 (357)
T ss_pred cEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHH
Confidence 56677787642 233555667776555 4444333221 1111211 1246788889999754 77
Q ss_pred cCCCcceEEec---CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 181 NHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 181 ~h~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
..+++.++.++ -| ..+++||+++|+|+|+....+....... +. +.|..+.. -+.+++.++|.++++|
T Consensus 262 ~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-----~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 262 AACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-----GDPAALAEAIRRLLED 332 (357)
T ss_pred HhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-----CCHHHHHHHHHHHHHC
Confidence 77888444442 23 3479999999999999766554433222 23 67777742 3789999999999998
Q ss_pred hHHHH
Q 047662 257 QDFKA 261 (301)
Q Consensus 257 ~~~r~ 261 (301)
++.++
T Consensus 333 ~~~~~ 337 (357)
T cd03795 333 PELRE 337 (357)
T ss_pred HHHHH
Confidence 85443
No 56
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.78 E-value=0.003 Score=57.54 Aligned_cols=87 Identities=11% Similarity=0.179 Sum_probs=59.4
Q ss_pred cCCceee-cccchh---hhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 165 SARGRMI-GWAPQQ---KVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 165 ~~~~~v~-~~~pq~---~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
.+++.+. .|+|+. .++..+++-++-++ +-.++++||+++|+|+|+.+..+ ...+.+. +.|..+..
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~- 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPP- 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcC-
Confidence 3566666 458765 37888887322232 33568999999999999987654 2334343 67777742
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHHHH
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r~~ 262 (301)
-+.+++.+++.+++++++.+++
T Consensus 319 ----~d~~~~~~~l~~l~~~~~~~~~ 340 (366)
T cd03822 319 ----GDPAALAEAIRRLLADPELAQA 340 (366)
T ss_pred ----CCHHHHHHHHHHHHcChHHHHH
Confidence 3689999999999998754443
No 57
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.77 E-value=0.0011 Score=63.24 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=57.1
Q ss_pred hhccCCCcceEEec-----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHH
Q 047662 178 KVLNHPSIACFLSH-----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQ 252 (301)
Q Consensus 178 ~iL~h~~v~~fItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~ 252 (301)
.+++.+++ ++.. +|..+++||+++|+|+|+-|..+++......+.+. |+++... +.+++.++|.+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~-------d~~~La~~l~~ 384 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE-------DAEDLAKAVTY 384 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC-------CHHHHHHHHHH
Confidence 36777776 3321 34446999999999999999888887777776554 7766653 68999999999
Q ss_pred HhCChHHHHHHH
Q 047662 253 VLGHQDFKARAL 264 (301)
Q Consensus 253 vl~~~~~r~~a~ 264 (301)
+++|++.+++..
T Consensus 385 ll~~~~~~~~m~ 396 (425)
T PRK05749 385 LLTDPDARQAYG 396 (425)
T ss_pred HhcCHHHHHHHH
Confidence 999886554433
No 58
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.77 E-value=0.0012 Score=62.77 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=74.4
Q ss_pred cCCceeecccchhh---hccCCCcceEEec---------CCc-hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEE
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSH---------CGW-NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGL 231 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItH---------gG~-~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~ 231 (301)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+....+ ....+.+. ..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceE
Confidence 46678889999765 7888888 5542 233 67999999999999976533 33445443 5788
Q ss_pred EeecCCCCCCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 232 RFDKNESGIITREEIKNKVDQVLG-HQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 232 ~l~~~~~~~~~~~~l~~av~~vl~-~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
.++. -+.+++.++|.++++ |++.+++ +++..++.+.+.-+......++.+-+.
T Consensus 351 lv~~-----~d~~~la~ai~~l~~~d~~~~~~---~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 351 LVPE-----NDAQALAQRLAAFSQLDTDELAP---VVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCCHHHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8752 368999999999998 8754433 223333333344555566666655443
No 59
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.75 E-value=0.00089 Score=60.91 Aligned_cols=131 Identities=12% Similarity=0.155 Sum_probs=79.7
Q ss_pred ceEEEEecCCcc-CCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCchhh-----hhcCCceeecccchhh--
Q 047662 109 SVLYAAFGSFTI-LDQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGFQE-----RVSARGRMIGWAPQQK-- 178 (301)
Q Consensus 109 ~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~-----~~~~~~~v~~~~pq~~-- 178 (301)
..+++..|+... ...+.+-+.+..+.. .+..+++.-++. ..+.+.+ ...+++.+.+++|+.+
T Consensus 202 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 273 (374)
T cd03817 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--------EREELEELARELGLADRVIFTGFVPREELP 273 (374)
T ss_pred CeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--------hHHHHHHHHHHcCCCCcEEEeccCChHHHH
Confidence 356677787643 233444444444433 334444433222 1111111 1246778889998765
Q ss_pred -hccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 179 -VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 179 -iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
++.++++ +|.. +..++++||+++|+|+|+.... ..+..+.+. +.|..+.. . +. ++.+++.++
T Consensus 274 ~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~---~--~~-~~~~~i~~l 340 (374)
T cd03817 274 DYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADG-ENGFLFPP---G--DE-ALAEALLRL 340 (374)
T ss_pred HHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecC-ceeEEeCC---C--CH-HHHHHHHHH
Confidence 6888888 5533 3347899999999999997643 344555553 68888853 1 22 899999999
Q ss_pred hCChHHH
Q 047662 254 LGHQDFK 260 (301)
Q Consensus 254 l~~~~~r 260 (301)
+++++.+
T Consensus 341 ~~~~~~~ 347 (374)
T cd03817 341 LQDPELR 347 (374)
T ss_pred HhChHHH
Confidence 9888543
No 60
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.73 E-value=0.00067 Score=62.59 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=63.2
Q ss_pred cCCceeecccchhh---hccCCCcceEEec----------CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEE
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSH----------CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGL 231 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItH----------gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~ 231 (301)
.+++.+.+++|+.+ ++..+++ ||.. |-.++++||+++|+|+|+-+..+ +...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 45677778888654 6888888 5532 23578999999999999877643 55556554 7888
Q ss_pred EeecCCCCCCCHHHHHHHHHHHhCChHHHHH
Q 047662 232 RFDKNESGIITREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 232 ~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~ 262 (301)
.++ .-+.+++.++|.+++.|++.+++
T Consensus 317 ~~~-----~~d~~~l~~~i~~l~~~~~~~~~ 342 (367)
T cd05844 317 LVP-----EGDVAALAAALGRLLADPDLRAR 342 (367)
T ss_pred EEC-----CCCHHHHHHHHHHHHcCHHHHHH
Confidence 884 23679999999999998864433
No 61
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.71 E-value=0.0036 Score=58.89 Aligned_cols=112 Identities=17% Similarity=0.226 Sum_probs=71.9
Q ss_pred cCCceeecccchhh---hccCCCcceEEecC----C-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSHC----G-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItHg----G-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
..++.+.+++|+.+ +++.+++ ||... | ..+++||+++|+|+|+....+ +...+.+. ..|..+.
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~-- 326 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLA-- 326 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEe--
Confidence 45677778888554 6888888 66433 2 267899999999999986532 34445453 5787553
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
...+.+++.++|.+++.|++.++ +++..++.+.+.-+-.....++.+.+
T Consensus 327 --~~~d~~~la~~I~~ll~d~~~~~----~~~~ar~~~~~~fsw~~~a~~~~~~l 375 (380)
T PRK15484 327 --EPMTSDSIISDINRTLADPELTQ----IAEQAKDFVFSKYSWEGVTQRFEEQI 375 (380)
T ss_pred --CCCCHHHHHHHHHHHHcCHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 23479999999999999886432 33333332233444444444555444
No 62
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.66 E-value=0.0027 Score=57.85 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=61.0
Q ss_pred hcCCceeecccchhh---hccCCCcceEEec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCC
Q 047662 164 VSARGRMIGWAPQQK---VLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNES 238 (301)
Q Consensus 164 ~~~~~~v~~~~pq~~---iL~h~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~ 238 (301)
..+++.+.+++|+.+ +|..+++-++-+. +..++++||+++|+|+|+....+ ....+ . ..|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~--- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP--- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC---
Confidence 346778889998764 6777777322221 23458999999999999865421 11122 2 23444532
Q ss_pred CCCCHHHHHHHHHHHhCChHHHHHHHHHHH
Q 047662 239 GIITREEIKNKVDQVLGHQDFKARALELKE 268 (301)
Q Consensus 239 ~~~~~~~l~~av~~vl~~~~~r~~a~~l~~ 268 (301)
-+.+++.++|.+++.|++.+.+..+-+.
T Consensus 321 --~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 321 --LDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred --CCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2789999999999999877666554443
No 63
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.65 E-value=0.0027 Score=57.44 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=63.9
Q ss_pred CCceeecccch-hhhccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAPQ-QKVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~pq-~~iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+++.+.+...+ ..++..+++ +|.... .++++||+++|+|+|+.... .+...+.+ .|..+..
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~~----- 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVPP----- 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeCC-----
Confidence 44555554333 347888887 665544 47999999999999986543 34444433 4555532
Q ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLE 289 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~ 289 (301)
-+.+++.+++.+++++++.++. +++.+++.+.+.-+-......+.+
T Consensus 317 ~~~~~l~~~i~~l~~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 317 GDPEALAEAIEALLADPALRQA---LGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred CCHHHHHHHHHHHHhChHHHHH---HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2689999999999988743322 222223222234444444444443
No 64
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.65 E-value=0.0028 Score=57.02 Aligned_cols=138 Identities=14% Similarity=0.167 Sum_probs=80.6
Q ss_pred CceEEEEecCCcc-CCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCch-hhh--hcCCceeecccchh-hhc
Q 047662 108 SSVLYAAFGSFTI-LDQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGF-QER--VSARGRMIGWAPQQ-KVL 180 (301)
Q Consensus 108 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~-~~~--~~~~~~v~~~~pq~-~iL 180 (301)
+.++++..|+... ...+.+.+.+..+.. .+..++ .++.... ....... ... ...++.+.++..+. .++
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~-i~G~~~~----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLL-LVGDGDE----ENPAAILEIEKLGLEGRVEFLGFRDDVPELL 261 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEE-EEcCCCc----chhhHHHHHHhcCCcceEEEeeccccHHHHH
Confidence 3467788888643 233444444444443 234443 3443311 0000000 111 13456666664433 378
Q ss_pred cCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 181 NHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 181 ~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
..+++ +|.... .++++||+++|+|+|+.+..+ ....+.+. +.|..+.. -+.+++.++|.+++.|
T Consensus 262 ~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~-----~~~~~~~~~i~~l~~~ 329 (359)
T cd03808 262 AAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPP-----GDAEALADAIERLIED 329 (359)
T ss_pred HhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECC-----CCHHHHHHHHHHHHhC
Confidence 88887 665432 678999999999999976543 33445443 67887742 3689999999999988
Q ss_pred hHHHHH
Q 047662 257 QDFKAR 262 (301)
Q Consensus 257 ~~~r~~ 262 (301)
++.+++
T Consensus 330 ~~~~~~ 335 (359)
T cd03808 330 PELRAR 335 (359)
T ss_pred HHHHHH
Confidence 855443
No 65
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.63 E-value=0.0017 Score=59.29 Aligned_cols=85 Identities=16% Similarity=0.215 Sum_probs=59.9
Q ss_pred cCCceeecccchhh---hccCCCcceEEec--------CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEe
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSH--------CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRF 233 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItH--------gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l 233 (301)
++++.+.+++|+.+ ++.++++.++-+. |..++++||+++|+|+|+.+..+ ....+.+. ..|..+
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~ 309 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLV 309 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEe
Confidence 46778889997554 7788888333222 33578999999999999976532 22344342 478877
Q ss_pred ecCCCCCCCHHHHHHHHHHHhCChHH
Q 047662 234 DKNESGIITREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 234 ~~~~~~~~~~~~l~~av~~vl~~~~~ 259 (301)
.. -+.+++.++|.+++.++..
T Consensus 310 ~~-----~~~~~l~~~i~~~~~~~~~ 330 (355)
T cd03799 310 PP-----GDPEALADAIERLLDDPEL 330 (355)
T ss_pred CC-----CCHHHHHHHHHHHHhCHHH
Confidence 42 3789999999999988854
No 66
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.62 E-value=0.0024 Score=59.38 Aligned_cols=85 Identities=15% Similarity=0.236 Sum_probs=62.8
Q ss_pred CCceeecccchhh---hccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCC
Q 047662 166 ARGRMIGWAPQQK---VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNES 238 (301)
Q Consensus 166 ~~~~v~~~~pq~~---iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~ 238 (301)
+++.+.+|+|+.+ ++..+++ ++.. +-..+++||+++|+|+|+.+..+ ....+.+. +.|..++.
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~--- 352 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDP--- 352 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCC---
Confidence 5677889999765 5888888 6643 22468999999999999876543 44456554 78888852
Q ss_pred CCCCHHHHHHHHHHHhCChHHHHH
Q 047662 239 GIITREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 239 ~~~~~~~l~~av~~vl~~~~~r~~ 262 (301)
-+.+++.++|.+++.+++.+++
T Consensus 353 --~~~~~l~~~i~~l~~~~~~~~~ 374 (398)
T cd03800 353 --RDPEALAAALRRLLTDPALRRR 374 (398)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHH
Confidence 3689999999999988754433
No 67
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.61 E-value=0.0054 Score=56.22 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=59.2
Q ss_pred cCCceeecccc-hh---hhccCCCcceEEecC----CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 165 SARGRMIGWAP-QQ---KVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 165 ~~~~~v~~~~p-q~---~iL~h~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
..++...+|++ +. .++..+++ ++... ..++++||+++|+|+|+....+ ....+.+. +.|+.+.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~-- 313 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAK-- 313 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeC--
Confidence 45667778888 43 36888887 76643 3579999999999999875432 22334332 5777774
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHH
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
..+.+++.+++.+++++++.+
T Consensus 314 ---~~~~~~~~~~l~~l~~~~~~~ 334 (365)
T cd03825 314 ---PGDPEDLAEGIEWLLADPDER 334 (365)
T ss_pred ---CCCHHHHHHHHHHHHhCHHHH
Confidence 246899999999999887643
No 68
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.60 E-value=0.0025 Score=57.81 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=59.4
Q ss_pred cCCceeecccchhh---hccCCCcceEEecC----CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
.+++.+.+|+++.+ ++..+++ +|... -.++++||+++|+|+|+.+..+ ....+.+ +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCC--
Confidence 46777889998554 6788887 54332 2568999999999999976533 3333433 67777742
Q ss_pred CCCCCHHHHHHHHHHHhCChHHHHHH
Q 047662 238 SGIITREEIKNKVDQVLGHQDFKARA 263 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~~~r~~a 263 (301)
+.+++.++|.+++++++.+++.
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~ 352 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAM 352 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHH
Confidence 3499999999999987544443
No 69
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.57 E-value=0.0035 Score=60.63 Aligned_cols=131 Identities=13% Similarity=0.178 Sum_probs=81.4
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCCCchhhhh-cCCceeecccchhh---hccCCC
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELC-NRPFLWVVRPDITTDANDRYPDGFQERV-SARGRMIGWAPQQK---VLNHPS 184 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~~~pq~~---iL~h~~ 184 (301)
.+++..|+... ...+..++++++.. +..++ .+|.. ...+.+.+.. ..++.+.+|++..+ ++..++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~-ivG~G-------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLA-FVGDG-------PYREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEE-EEeCC-------hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 45566687642 23355566777554 45544 44432 0112222222 24567779987554 788888
Q ss_pred cceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhc---eeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 185 IACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICD---IWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 185 v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~---~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
+ ||.-.. .++++||+++|+|+|+....+ ....+.+ . +.|..+.. -+.+++.++|.++++|+
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~-----~d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTP-----GDVDDCVEKLETLLADP 401 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCC-----CCHHHHHHHHHHHHhCH
Confidence 8 775433 346899999999999876532 2223333 4 78888853 36899999999999988
Q ss_pred HHHHH
Q 047662 258 DFKAR 262 (301)
Q Consensus 258 ~~r~~ 262 (301)
+.+++
T Consensus 402 ~~~~~ 406 (465)
T PLN02871 402 ELRER 406 (465)
T ss_pred HHHHH
Confidence 65444
No 70
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.57 E-value=0.0055 Score=57.78 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=61.2
Q ss_pred CCceeecccchhh---hccCCCcceEEec-CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAPQQK---VLNHPSIACFLSH-CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~pq~~---iL~h~~v~~fItH-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+++.+.+++|+.+ +|..+++-++.+. .| .++++||+++|+|+|+... ......+.+. ..|..++.
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~----- 350 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDF----- 350 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCC-----
Confidence 5677889998765 6778888333333 22 2489999999999998754 3344555443 57877742
Q ss_pred CCHHHHHHHHHHHhCChHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~~~r~~ 262 (301)
-+.+++.++|.+++.|++.+++
T Consensus 351 ~d~~~la~~i~~ll~~~~~~~~ 372 (396)
T cd03818 351 FDPDALAAAVIELLDDPARRAR 372 (396)
T ss_pred CCHHHHHHHHHHHHhCHHHHHH
Confidence 3689999999999998855444
No 71
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.56 E-value=0.00046 Score=56.86 Aligned_cols=143 Identities=17% Similarity=0.171 Sum_probs=84.8
Q ss_pred CCceEEEEecCCcc-CCHHHHHHHHHHHhh--CCCCEEEEEcCCCCCCCCCCCCCchhh--hhcCCceeecccchh---h
Q 047662 107 PSSVLYAAFGSFTI-LDQVQFQELAFGLEL--CNRPFLWVVRPDITTDANDRYPDGFQE--RVSARGRMIGWAPQQ---K 178 (301)
Q Consensus 107 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~~~pq~---~ 178 (301)
++..+++..|+... ...+.+-+.+.-+.. ...-.++.++.. .....-....+ ...+++.+.++.++. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDG----EYKKELKNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHC----CHHHHHHHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccc----cccccccccccccccccccccccccccccccc
Confidence 44577788888743 233433333333321 222344555522 00000001111 134677788888732 3
Q ss_pred hccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHh
Q 047662 179 VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVL 254 (301)
Q Consensus 179 iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 254 (301)
++..+++ +|+. +...+++||+++|+|+|+.. ...+...+.+. +.|+.+.. -+.+++.++|.+++
T Consensus 89 ~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~~-----~~~~~l~~~i~~~l 156 (172)
T PF00534_consen 89 LYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFDP-----NDIEELADAIEKLL 156 (172)
T ss_dssp HHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEEST-----TSHHHHHHHHHHHH
T ss_pred cccccee--ccccccccccccccccccccccceeecc----ccCCceeeccc-cceEEeCC-----CCHHHHHHHHHHHH
Confidence 7888888 6666 56779999999999999864 44455666564 67999952 28999999999999
Q ss_pred CChHHHHHHHH
Q 047662 255 GHQDFKARALE 265 (301)
Q Consensus 255 ~~~~~r~~a~~ 265 (301)
.+++++++..+
T Consensus 157 ~~~~~~~~l~~ 167 (172)
T PF00534_consen 157 NDPELRQKLGK 167 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 88865555443
No 72
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.54 E-value=0.00083 Score=64.50 Aligned_cols=142 Identities=14% Similarity=0.151 Sum_probs=78.2
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh------cCCceeecccchhhh-
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV------SARGRMIGWAPQQKV- 179 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~------~~~~~v~~~~pq~~i- 179 (301)
+..++|.+|.+.....++.+..-++-|+..+...+|..+.+.. -...+.... ++++.+.++.|+.+-
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~------~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS------GEARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT------HHHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH------HHHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 3459999999999999999988888888888889998865411 011222211 355666677776553
Q ss_pred --ccCCCcceEE---ecCCchhHHHHHHhCCCcccCCCCCc-hhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 180 --LNHPSIACFL---SHCGWNSTMEGVSNGIPFLCWPYFAE-QFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 180 --L~h~~v~~fI---tHgG~~s~~Eal~~GvP~i~~P~~~D-Q~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
+...++ ++ ..+|.+|++||++.|||+|.+|--.= ...-+..+.. +|+.-.+- -+.++-.+.--++
T Consensus 357 ~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA------~s~~eYv~~Av~L 427 (468)
T PF13844_consen 357 RRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIA------DSEEEYVEIAVRL 427 (468)
T ss_dssp HHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-------SSHHHHHHHHHHH
T ss_pred HHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcC------CCHHHHHHHHHHH
Confidence 334444 54 45789999999999999999995322 2223334433 47666553 2566655555566
Q ss_pred hCChHHHHHH
Q 047662 254 LGHQDFKARA 263 (301)
Q Consensus 254 l~~~~~r~~a 263 (301)
-+|.+++++.
T Consensus 428 a~D~~~l~~l 437 (468)
T PF13844_consen 428 ATDPERLRAL 437 (468)
T ss_dssp HH-HHHHHHH
T ss_pred hCCHHHHHHH
Confidence 6787665543
No 73
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.47 E-value=0.0032 Score=57.56 Aligned_cols=86 Identities=16% Similarity=0.172 Sum_probs=56.6
Q ss_pred CCceeecccchh-hhccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAPQQ-KVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~pq~-~iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+++.+.++..+. .+|..+++ ||.-.. .++++||+++|+|+|+.. ...+...+.+ .|..+..
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~---~g~~~~~----- 310 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGD---SGLIVPI----- 310 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecC---CceEeCC-----
Confidence 566677766543 47888887 554332 578999999999999753 3445555544 3344421
Q ss_pred CCHHHHHHHHHHHh-CChHHHHHHHH
Q 047662 241 ITREEIKNKVDQVL-GHQDFKARALE 265 (301)
Q Consensus 241 ~~~~~l~~av~~vl-~~~~~r~~a~~ 265 (301)
-+.+++.+++.+++ .++.+++...+
T Consensus 311 ~~~~~~~~~i~~ll~~~~~~~~~~~~ 336 (360)
T cd04951 311 SDPEALANKIDEILKMSGEERDIIGA 336 (360)
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 37889999999998 45555554433
No 74
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.43 E-value=0.0083 Score=53.72 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=58.4
Q ss_pred cCCceeecccchh-hhccCCCcceEEec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCC
Q 047662 165 SARGRMIGWAPQQ-KVLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGII 241 (301)
Q Consensus 165 ~~~~~v~~~~pq~-~iL~h~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~ 241 (301)
.+++.+.++.++. .++..+++-++-++ |..++++||+++|+|+|+.... .....+.+. +.|+.++. -
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~-----~ 314 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPV-----G 314 (353)
T ss_pred CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECC-----C
Confidence 3566777776654 47888887322222 3357899999999999986553 445556554 78888853 3
Q ss_pred CHHHH---HHHHHHHhCChHHHHHHHH
Q 047662 242 TREEI---KNKVDQVLGHQDFKARALE 265 (301)
Q Consensus 242 ~~~~l---~~av~~vl~~~~~r~~a~~ 265 (301)
+.+.+ .+++..+..+++.++++.+
T Consensus 315 ~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 315 DEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred CHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 56666 5666666666654444333
No 75
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.41 E-value=0.0067 Score=55.97 Aligned_cols=111 Identities=12% Similarity=0.070 Sum_probs=69.6
Q ss_pred CCceeecccchh-hhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAPQQ-KVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~pq~-~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+++.+.++.++. .++..+++ +|.- +...+++||+++|+|+|+.... ..+..+.+. ..|..++.
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~----- 320 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDV----- 320 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCC-----
Confidence 556677776654 37888887 5532 3356999999999999996543 345555553 57777742
Q ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
-+.+++.+++.+++.+++.+++..+-+... +.+.-+.......+.+.+
T Consensus 321 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y 368 (371)
T cd04962 321 GDVEAMAEYALSLLEDDELWQEFSRAARNR---AAERFDSERIVPQYEALY 368 (371)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHH
Confidence 368999999999998875444332222221 122345555555555443
No 76
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.40 E-value=0.0072 Score=56.22 Aligned_cols=111 Identities=9% Similarity=0.055 Sum_probs=69.0
Q ss_pred CCceeecccch-hhhccCCCcceEE--ec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMIGWAPQ-QKVLNHPSIACFL--SH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~~~~pq-~~iL~h~~v~~fI--tH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+++.+.++..+ ..++..+++ || ++ |-.++++||+++|+|+|+....+ +...+.+. ..|..++.
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~-~~g~~~~~----- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHG-VTGALVPP----- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCC-CceEEeCC-----
Confidence 34445454333 347888888 55 33 44679999999999999976533 44555553 57877742
Q ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
-+.+++.++|.+++.+++.++. +++..++.+.+.-+......++.+-.
T Consensus 323 ~d~~~la~~i~~l~~~~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~y 370 (374)
T TIGR03088 323 GDAVALARALQPYVSDPAARRA---HGAAGRARAEQQFSINAMVAAYAGLY 370 (374)
T ss_pred CCHHHHHHHHHHHHhCHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3688999999999988754432 22222222223455555555555443
No 77
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.39 E-value=0.0086 Score=56.73 Aligned_cols=115 Identities=7% Similarity=0.083 Sum_probs=72.5
Q ss_pred CCceeecccchhh---hccCCCcceEEecCCc------hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 166 ARGRMIGWAPQQK---VLNHPSIACFLSHCGW------NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 166 ~~~~v~~~~pq~~---iL~h~~v~~fItHgG~------~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
+++.+.+|+|+.+ +++.+++.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC-
Confidence 4677789988654 7888888655555442 3478999999999998754321 11222 2 57777742
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
-+.+++.++|.++++|++.+++.. +..++.+++.-+......++++.+.+
T Consensus 358 ----~d~~~la~~i~~l~~~~~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 358 ----ESVEALVAAIAALARQALLRPKLG---TVAREYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHH---HHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 368999999999998875443322 22222223344555555565555443
No 78
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.37 E-value=0.0029 Score=58.85 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=77.3
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCE-EEEEcCCCCCCCCCCCCCchhh-----hhcCCceeecccch--h---h
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPF-LWVVRPDITTDANDRYPDGFQE-----RVSARGRMIGWAPQ--Q---K 178 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~~lp~~~~~-----~~~~~~~v~~~~pq--~---~ 178 (301)
.+++..|.........+..+++++......+ ++.+|... ..+.+.+ ..++++.+.+|.++ . .
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~-------~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~ 253 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS-------DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQ 253 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc-------cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHH
Confidence 5566777754322334556677765543222 33444330 1111211 12467778888754 2 2
Q ss_pred hccCCCcceEEe--c--CCchhHHHHHHhCCCcccCC-CCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 179 VLNHPSIACFLS--H--CGWNSTMEGVSNGIPFLCWP-YFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 179 iL~h~~v~~fIt--H--gG~~s~~Eal~~GvP~i~~P-~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
.+..+++ +|. + |-.++++||+++|+|+|+.- ..+ ....+.+. ..|..+.. -+.+++.++|.++
T Consensus 254 ~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~-----~d~~~la~~i~~l 321 (359)
T PRK09922 254 KIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTP-----GNIDEFVGKLNKV 321 (359)
T ss_pred HHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECC-----CCHHHHHHHHHHH
Confidence 4455666 553 3 33679999999999999876 322 22344443 57877742 4899999999999
Q ss_pred hCChH
Q 047662 254 LGHQD 258 (301)
Q Consensus 254 l~~~~ 258 (301)
++|++
T Consensus 322 ~~~~~ 326 (359)
T PRK09922 322 ISGEV 326 (359)
T ss_pred HhCcc
Confidence 98885
No 79
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.37 E-value=0.0013 Score=58.42 Aligned_cols=143 Identities=12% Similarity=0.072 Sum_probs=99.6
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh--cCCceeecccchh-hhccCCCcc
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV--SARGRMIGWAPQQ-KVLNHPSIA 186 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~~pq~-~iL~h~~v~ 186 (301)
-|+|++|-.- +.....+++..|.+.++.+-.+++.. .+-+.+...+. .+|+.+......+ .++..++.
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 4889998632 33456678888877776666666632 12223333332 2455555544434 37777887
Q ss_pred eEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHH
Q 047662 187 CFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALEL 266 (301)
Q Consensus 187 ~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l 266 (301)
.|+-+| .|+.|++..|+|.+++|+...|-.-|+..+. +|+-..+.. . ++......-+.+++.|...|++.-.-
T Consensus 231 -aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~---~-l~~~~~~~~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 231 -AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGY---H-LKDLAKDYEILQIQKDYARRKNLSFG 303 (318)
T ss_pred -heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccC---C-CchHHHHHHHHHhhhCHHHhhhhhhc
Confidence 888766 5899999999999999999999999999977 488877752 2 67777878888888888777775544
Q ss_pred HH
Q 047662 267 KE 268 (301)
Q Consensus 267 ~~ 268 (301)
++
T Consensus 304 ~~ 305 (318)
T COG3980 304 SK 305 (318)
T ss_pred cc
Confidence 33
No 80
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.34 E-value=0.0076 Score=56.76 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=61.7
Q ss_pred cCCceeecccchhh---hccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
.+++.+.+++|..+ +|..+++ ||.. +...+++||+++|+|+|+....+ ....+.+. +.|+.++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCC--
Confidence 35678888887653 7888888 5532 22458999999999999976533 33344443 67877742
Q ss_pred CCCCCHHHHHHHHHHHhCChHHHHHH
Q 047662 238 SGIITREEIKNKVDQVLGHQDFKARA 263 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~~~r~~a 263 (301)
-+.+++.++|.+++++++.++++
T Consensus 353 ---~d~~~la~~i~~~l~~~~~~~~~ 375 (405)
T TIGR03449 353 ---HDPADWADALARLLDDPRTRIRM 375 (405)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHH
Confidence 37899999999999887654443
No 81
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.33 E-value=0.006 Score=56.88 Aligned_cols=140 Identities=10% Similarity=0.098 Sum_probs=78.0
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhC--CCCEEEEEcCCCCCCCCCCCCCchhhh---hc---CCcee-ecccchhh--
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELC--NRPFLWVVRPDITTDANDRYPDGFQER---VS---ARGRM-IGWAPQQK-- 178 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~lp~~~~~~---~~---~~~~v-~~~~pq~~-- 178 (301)
.+++..|.... .+.+..+++++... +..+++..++.. ...+-+.+.+. .. +++.. .++++..+
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPD----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCC----cHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 45666677643 23345556666443 456555544331 00011111111 11 22333 35676543
Q ss_pred -hccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC-CCCCCHHHHHHHHHH
Q 047662 179 -VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE-SGIITREEIKNKVDQ 252 (301)
Q Consensus 179 -iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~-~~~~~~~~l~~av~~ 252 (301)
++.++++ ||.- +...+++||+++|+|+|+.... .....+++. +.|..+..++ ...-..+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHH
Confidence 7888888 6642 2245789999999999997653 344555554 6788886311 001112889999999
Q ss_pred HhCChHHHHH
Q 047662 253 VLGHQDFKAR 262 (301)
Q Consensus 253 vl~~~~~r~~ 262 (301)
+++|++.+++
T Consensus 349 l~~~~~~~~~ 358 (388)
T TIGR02149 349 LLADPELAKK 358 (388)
T ss_pred HHhCHHHHHH
Confidence 9988755443
No 82
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.25 E-value=0.0011 Score=52.28 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=66.2
Q ss_pred eEEEEecCCcc-CCHHHHHH-HHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhh-hccCCCcc
Q 047662 110 VLYAAFGSFTI-LDQVQFQE-LAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQK-VLNHPSIA 186 (301)
Q Consensus 110 vvyvs~GS~~~-~~~~~~~~-~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~-iL~h~~v~ 186 (301)
+.++++|+... ...+.+-+ .+..+.+....+-+.+-+. .|+.+.+...+++.+.+|++... +++.+++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~--------~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~ 74 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN--------GPDELKRLRRPNVRFHGFVEELPEILAAADVG 74 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE--------SS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC--------CHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEE
Confidence 34556666542 23444444 5555544333444444222 12222222246888889886443 88899996
Q ss_pred eEEecC---CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCC
Q 047662 187 CFLSHC---GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 187 ~fItHg---G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~ 256 (301)
+..+.. -.+.+.|++++|+|+|+.+.. .....+. .+.|..+. -+.+++.++|+++++|
T Consensus 75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~-~~~~~~~~------~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 75 LIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEE-DGCGVLVA------NDPEELAEAIERLLND 135 (135)
T ss_dssp EE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T------T-HHHHHHHHHHHHH-
T ss_pred EEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheee-cCCeEEEC------CCHHHHHHHHHHHhcC
Confidence 665532 248999999999999997661 1222323 37777663 2799999999999865
No 83
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.15 E-value=0.026 Score=53.11 Aligned_cols=67 Identities=18% Similarity=0.275 Sum_probs=57.4
Q ss_pred EEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHH
Q 047662 188 FLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARA 263 (301)
Q Consensus 188 fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a 263 (301)
|+.+||+| .+|++++|+|+|.=|...-|..-++++... |.|+.++ +.+.+.+++..++.|+..+++.
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~~~r~~~ 393 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE-------DADLLAKAVELLLADEDKREAY 393 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCHHHHHHH
Confidence 45688887 679999999999999999999999999887 9999995 4888999999888887555544
No 84
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.14 E-value=0.019 Score=54.21 Aligned_cols=85 Identities=15% Similarity=0.141 Sum_probs=59.0
Q ss_pred CCceeecccchhh-hccCCCcceEEec--CCc-hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCC
Q 047662 166 ARGRMIGWAPQQK-VLNHPSIACFLSH--CGW-NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGII 241 (301)
Q Consensus 166 ~~~~v~~~~pq~~-iL~h~~v~~fItH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~ 241 (301)
+++.+.+++++.. ++.++++-++=++ .|. +.++||+++|+|+|+.+...+.. .... |.|+.+. -
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~------~ 347 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA------A 347 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC------C
Confidence 5677788888654 7888888322233 343 46999999999999988643321 1122 6677663 3
Q ss_pred CHHHHHHHHHHHhCChHHHHH
Q 047662 242 TREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 242 ~~~~l~~av~~vl~~~~~r~~ 262 (301)
+.+++.++|.+++.|++.+++
T Consensus 348 ~~~~la~ai~~ll~~~~~~~~ 368 (397)
T TIGR03087 348 DPADFAAAILALLANPAEREE 368 (397)
T ss_pred CHHHHHHHHHHHHcCHHHHHH
Confidence 789999999999998865443
No 85
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.10 E-value=0.0027 Score=59.09 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=54.4
Q ss_pred hhhccCCCcceEEecCCchhHHHHHHhCCCcccCCC--CCchhhhHHhhhc--eeeeEEEeec----------CCCCCCC
Q 047662 177 QKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY--FAEQFLNEKYICD--IWKVGLRFDK----------NESGIIT 242 (301)
Q Consensus 177 ~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~Na~~~~~--~~G~G~~l~~----------~~~~~~~ 242 (301)
.+++.++++ .|+-+|..|+ |+..+|+|||+ ++ ..-|+.||+++.+ ..|....+-. --.+..+
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t 305 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVT 305 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCC
Confidence 458888888 9999999999 99999999998 54 3468889999972 2355555521 0135688
Q ss_pred HHHHHHHHHH
Q 047662 243 REEIKNKVDQ 252 (301)
Q Consensus 243 ~~~l~~av~~ 252 (301)
.+.|.+++.+
T Consensus 306 ~~~la~~i~~ 315 (347)
T PRK14089 306 VENLLKAYKE 315 (347)
T ss_pred HHHHHHHHHH
Confidence 9999998877
No 86
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.09 E-value=0.0025 Score=58.89 Aligned_cols=108 Identities=15% Similarity=0.283 Sum_probs=75.7
Q ss_pred cCCceeecccchhhh---ccCCCcceEEecC-------C------chhHHHHHHhCCCcccCCCCCchhhhHHhhhceee
Q 047662 165 SARGRMIGWAPQQKV---LNHPSIACFLSHC-------G------WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWK 228 (301)
Q Consensus 165 ~~~~~v~~~~pq~~i---L~h~~v~~fItHg-------G------~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G 228 (301)
.+|+...+|+|+.++ |.. +++++...- . .+-+.+++++|+|+|+++. ...+..+++. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHHHhC-C
Confidence 467888899998764 444 554443321 1 1237788999999999754 4566777775 9
Q ss_pred eEEEeecCCCCCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHH
Q 047662 229 VGLRFDKNESGIITREEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLE 289 (301)
Q Consensus 229 ~G~~l~~~~~~~~~~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~ 289 (301)
+|+.++ +.+++.+++.++..++ +|++|++++++.++. |.--.+.+.+++.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 999994 5678999998864322 689999999999886 5555555555544
No 87
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.05 E-value=0.0047 Score=49.03 Aligned_cols=108 Identities=18% Similarity=0.172 Sum_probs=65.6
Q ss_pred EEEEecCCccCCHHHHH--HHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecc--cch-hhhccCCCc
Q 047662 111 LYAAFGSFTILDQVQFQ--ELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGW--APQ-QKVLNHPSI 185 (301)
Q Consensus 111 vyvs~GS~~~~~~~~~~--~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~--~pq-~~iL~h~~v 185 (301)
++|+-||....-...+. ++..-.+....++|..+|.. + ..| +.+ ..+.+| .+- +.+...+++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~----d--~kp------vag-l~v~~F~~~~kiQsli~darI 68 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG----D--IKP------VAG-LRVYGFDKEEKIQSLIHDARI 68 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC----C--ccc------ccc-cEEEeechHHHHHHHhhcceE
Confidence 68999997221111111 12221222345778888764 1 122 111 234333 343 335656665
Q ss_pred ceEEecCCchhHHHHHHhCCCcccCCCC--------CchhhhHHhhhceeeeEEEee
Q 047662 186 ACFLSHCGWNSTMEGVSNGIPFLCWPYF--------AEQFLNEKYICDIWKVGLRFD 234 (301)
Q Consensus 186 ~~fItHgG~~s~~Eal~~GvP~i~~P~~--------~DQ~~Na~~~~~~~G~G~~l~ 234 (301)
+|+|||.||++.++..++|.|++|-. .+|..-|..+++. +.=+...
T Consensus 69 --VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~s 122 (161)
T COG5017 69 --VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACS 122 (161)
T ss_pred --EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEc
Confidence 99999999999999999999999963 3577788888763 6655554
No 88
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.02 E-value=0.01 Score=55.32 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=59.3
Q ss_pred cCCceeecccchhh---hccCCCcceEEecC---C-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
.+++.+.+++|+.. +|..+++ ++... | ..+++||+++|+|+|+.-..+ ....+.+. +.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeC---
Confidence 46788889998764 6788887 55321 1 357899999999999975433 33345443 5777773
Q ss_pred CCCCCHHHHHHHHHHHhCChHHHH
Q 047662 238 SGIITREEIKNKVDQVLGHQDFKA 261 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~~~r~ 261 (301)
.+.+++.++|.+++++++.++
T Consensus 349 ---~~~~~~a~~i~~l~~~~~~~~ 369 (392)
T cd03805 349 ---PTPEEFAEAMLKLANDPDLAD 369 (392)
T ss_pred ---CCHHHHHHHHHHHHhChHHHH
Confidence 168999999999998885443
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.01 E-value=0.016 Score=54.32 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=91.5
Q ss_pred HHhcccccEEEEcCcccccchhhhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCcc-CC
Q 047662 44 MRAMRAVNFQLCHSTYELESEAFTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTI-LD 122 (301)
Q Consensus 44 ~~~~~~~~~vl~ns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~-~~ 122 (301)
...++++|+++..|....+. .....++++.|..-......... ...... ...+...+ ..+++.+|++.. ..
T Consensus 148 ~~~~~~ad~vi~~S~~l~~~-~~~~~~~i~~i~ngvd~~~f~~~----~~~~~~-~~~~~~~~--~~~i~y~G~l~~~~d 219 (373)
T cd04950 148 RRLLKRADLVFTTSPSLYEA-KRRLNPNVVLVPNGVDYEHFAAA----RDPPPP-PADLAALP--RPVIGYYGAIAEWLD 219 (373)
T ss_pred HHHHHhCCEEEECCHHHHHH-HhhCCCCEEEcccccCHHHhhcc----cccCCC-hhHHhcCC--CCEEEEEeccccccC
Confidence 34557899998777755543 23333455544432211100000 000000 01122222 245566788753 33
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhh---hccCCCcceEEe------cCC
Q 047662 123 QVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQK---VLNHPSIACFLS------HCG 193 (301)
Q Consensus 123 ~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~---iL~h~~v~~fIt------HgG 193 (301)
.+.+.+++.. ..+..|++ +|+.... .. ...+ ...+|+.+.++.|..+ .|.+.++.++-. .++
T Consensus 220 ~~ll~~la~~--~p~~~~vl-iG~~~~~---~~-~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~ 290 (373)
T cd04950 220 LELLEALAKA--RPDWSFVL-IGPVDVS---ID-PSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRAT 290 (373)
T ss_pred HHHHHHHHHH--CCCCEEEE-ECCCcCc---cC-hhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcC
Confidence 3444333332 23455443 4432000 00 0011 1136788889998655 688888844322 222
Q ss_pred -chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 194 -WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 194 -~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
-+-++|++++|+|+|+.++ ....... +.++.+. . +.+++.++|++++.++
T Consensus 291 ~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~~~~~~~----~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 291 SPLKLFEYLAAGKPVVATPL-------PEVRRYE-DEVVLIA----D--DPEEFVAAIEKALLED 341 (373)
T ss_pred CcchHHHHhccCCCEEecCc-------HHHHhhc-CcEEEeC----C--CHHHHHHHHHHHHhcC
Confidence 3458999999999998764 1222222 3233332 1 7999999999976544
No 90
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.00 E-value=0.029 Score=52.92 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=54.0
Q ss_pred cCCceeecccchhh---hccCCCcceEEecC---Cc-hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSHC---GW-NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE 237 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItHg---G~-~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~ 237 (301)
.+++.+.+|+|+.+ +++.+++ |+.-. |. .+++||+++|+|+|+.+..+ ....+.+ |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC---
Confidence 35677789988654 7888887 55322 33 49999999999999987743 2233433 4343332
Q ss_pred CCCCCHHHHHHHHHHHhCCh
Q 047662 238 SGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 238 ~~~~~~~~l~~av~~vl~~~ 257 (301)
.+.+++.+++.+++.+.
T Consensus 318 ---~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 ---PDVESIVRKLEEAISIL 334 (398)
T ss_pred ---CCHHHHHHHHHHHHhCh
Confidence 26899999999999764
No 91
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.95 E-value=0.011 Score=54.83 Aligned_cols=86 Identities=17% Similarity=0.171 Sum_probs=60.6
Q ss_pred cCCceeecccchhh-hccCCCcceEEec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCC
Q 047662 165 SARGRMIGWAPQQK-VLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGII 241 (301)
Q Consensus 165 ~~~~~v~~~~pq~~-iL~h~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~ 241 (301)
.+++.+.++.++.. ++..+++-++.++ |...+++||+++|+|+|+..... .+...+.+. ..|..++. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~-----~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK-----G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC-----C
Confidence 35566667666554 7888888555555 33568999999999999865431 133445453 68888842 4
Q ss_pred CHHHHHHHHHHHhCChHH
Q 047662 242 TREEIKNKVDQVLGHQDF 259 (301)
Q Consensus 242 ~~~~l~~av~~vl~~~~~ 259 (301)
+.+++.++|.+++.+++.
T Consensus 331 d~~~la~~i~~ll~~~~~ 348 (372)
T cd04949 331 DIEALAEAIIELLNDPKL 348 (372)
T ss_pred cHHHHHHHHHHHHcCHHH
Confidence 789999999999998743
No 92
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.93 E-value=0.021 Score=54.79 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=58.5
Q ss_pred cCCceeecccchhh---hccCC--CcceEEecC---C-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 165 SARGRMIGWAPQQK---VLNHP--SIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~--~v~~fItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
.+++.+.+++++.+ ++..+ +..+||... | -.+++||+++|+|+|+....+ +...+.+. ..|+.+..
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEeCC
Confidence 45666667777655 35544 123377643 2 468999999999999886533 34445443 57888752
Q ss_pred CCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 236 NESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
-+.+++.++|.+++.|++.+
T Consensus 391 -----~d~~~la~~i~~ll~~~~~~ 410 (439)
T TIGR02472 391 -----LDLEAIASALEDALSDSSQW 410 (439)
T ss_pred -----CCHHHHHHHHHHHHhCHHHH
Confidence 36899999999999988643
No 93
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.93 E-value=0.002 Score=59.97 Aligned_cols=208 Identities=14% Similarity=0.124 Sum_probs=103.0
Q ss_pred ccEEEEcCcccccchhhh--cCCCCCCCCccccCCCCCCCCCCCCCCCcch--HHHhhcCCCCceEEEEecCCccCC-H-
Q 047662 50 VNFQLCHSTYELESEAFT--VVPELLPIGPLLAGNRLGNSAGHFWREDSSC--LEWLDQQQPSSVLYAAFGSFTILD-Q- 123 (301)
Q Consensus 50 ~~~vl~ns~~~le~~~~~--~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~vvyvs~GS~~~~~-~- 123 (301)
+++.++.|-..-+.-... -..+++.||....+...... ....... ..++.. .+++.++|++=...... +
T Consensus 123 a~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~----~~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~ 197 (346)
T PF02350_consen 123 AHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNK----EEIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPE 197 (346)
T ss_dssp -SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHH----HTTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH-
T ss_pred hhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhH----HHHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChH
Confidence 566666666544322111 13477888876653210000 0011111 122222 55669999985544444 3
Q ss_pred --HHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCCCchhhhhc--CCceeecccc---hhhhccCCCcceEEecCCch
Q 047662 124 --VQFQELAFGLELC-NRPFLWVVRPDITTDANDRYPDGFQERVS--ARGRMIGWAP---QQKVLNHPSIACFLSHCGWN 195 (301)
Q Consensus 124 --~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~lp~~~~~~~~--~~~~v~~~~p---q~~iL~h~~v~~fItHgG~~ 195 (301)
..+.+++++|... ++++||.+.++.. ..+.+.+... +++.+.+-++ ...+|.++++ +|+-.|
T Consensus 198 ~~~~i~~~l~~L~~~~~~~vi~~~hn~p~------~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs-- 267 (346)
T PF02350_consen 198 RLEQILEALKALAERQNVPVIFPLHNNPR------GSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS-- 267 (346)
T ss_dssp -HHHHHHHHHHHHHHTTEEEEEE--S-HH------HHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEecCCch------HHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--
Confidence 4566666777555 7889998864310 0011111111 4677765444 4458889888 999999
Q ss_pred hHH-HHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHh
Q 047662 196 STM-EGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSI 274 (301)
Q Consensus 196 s~~-Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~ 274 (301)
++. ||.+.|+|.|.+=-.++.+.- + .. |..+.+. .+.++|.+++++++.+....++.......+-
T Consensus 268 GI~eEa~~lg~P~v~iR~~geRqe~---r-~~-~~nvlv~------~~~~~I~~ai~~~l~~~~~~~~~~~~~npYg--- 333 (346)
T PF02350_consen 268 GIQEEAPSLGKPVVNIRDSGERQEG---R-ER-GSNVLVG------TDPEAIIQAIEKALSDKDFYRKLKNRPNPYG--- 333 (346)
T ss_dssp HHHHHGGGGT--EEECSSS-S-HHH---H-HT-TSEEEET------SSHHHHHHHHHHHHH-HHHHHHHHCS--TT----
T ss_pred cHHHHHHHhCCeEEEecCCCCCHHH---H-hh-cceEEeC------CCHHHHHHHHHHHHhChHHHHhhccCCCCCC---
Confidence 666 999999999999333333322 2 21 5555553 4899999999999987555555444333332
Q ss_pred hcCCChHHHHHHHH
Q 047662 275 REGGSSRKTFQNFL 288 (301)
Q Consensus 275 ~~~gss~~~l~~~v 288 (301)
.|.+...+.+++
T Consensus 334 --dG~as~rI~~~L 345 (346)
T PF02350_consen 334 --DGNASERIVEIL 345 (346)
T ss_dssp --SS-HHHHHHHHH
T ss_pred --CCcHHHHHHHhh
Confidence 244444444443
No 94
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.90 E-value=0.03 Score=52.23 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=65.6
Q ss_pred CCceeeccc--chh---hhccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 166 ARGRMIGWA--PQQ---KVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 166 ~~~~v~~~~--pq~---~iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
+++.+.++. ++. .+++.+++ |+...- ..+++||+++|+|+|+....+ ....+.+. ..|+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC--
Confidence 456666665 333 36777777 775432 459999999999999876532 22334443 5676653
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
+.+++..+|.+++.+++.++...+-+.. .+.+.-+....+.++++.+
T Consensus 323 -----~~~~~a~~i~~ll~~~~~~~~~~~~a~~---~~~~~~s~~~~~~~~~~~~ 369 (372)
T cd03792 323 -----TVEEAAVRILYLLRDPELRRKMGANARE---HVRENFLITRHLKDYLYLI 369 (372)
T ss_pred -----CcHHHHHHHHHHHcCHHHHHHHHHHHHH---HHHHHcCHHHHHHHHHHHH
Confidence 3567788999999888665443322222 2222345555555555544
No 95
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.90 E-value=0.046 Score=49.90 Aligned_cols=139 Identities=16% Similarity=0.090 Sum_probs=77.4
Q ss_pred CceEEEEecCCcc-CCHHHHHHHHHHHhhCCCCE-EEEEcCCCCCCCCCCCCCchh---h--hhcCCceeecccchh-hh
Q 047662 108 SSVLYAAFGSFTI-LDQVQFQELAFGLELCNRPF-LWVVRPDITTDANDRYPDGFQ---E--RVSARGRMIGWAPQQ-KV 179 (301)
Q Consensus 108 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~~lp~~~~---~--~~~~~~~v~~~~pq~-~i 179 (301)
...+++..|.... ...+.+.+.+..+...+..+ ++.+|.... ...+.+.+. . ...+++.+.+|.++. .+
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~---~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG---RRFYYAELLELIKRLGLQDRVTFVGHCSDMPAA 260 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc---cchHHHHHHHHHHHcCCcceEEEcCCcccHHHH
Confidence 3466777787643 33455555555555432222 333443210 001111111 1 123567777875433 38
Q ss_pred ccCCCcceEEec---CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHh-C
Q 047662 180 LNHPSIACFLSH---CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVL-G 255 (301)
Q Consensus 180 L~h~~v~~fItH---gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl-~ 255 (301)
|..+++-++-++ |..++++||+++|+|+|+....+ ....+.+. +.|..+.. -+.+++.++|.+++ .
T Consensus 261 l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~-~~g~~~~~-----~~~~~l~~~i~~~~~~ 330 (355)
T cd03819 261 YALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPG-ETGLLVPP-----GDAEALAQALDQILSL 330 (355)
T ss_pred HHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCC-CceEEeCC-----CCHHHHHHHHHHHHhh
Confidence 888888333331 12469999999999999876433 34445443 57887742 37889999996555 3
Q ss_pred ChHH
Q 047662 256 HQDF 259 (301)
Q Consensus 256 ~~~~ 259 (301)
+++.
T Consensus 331 ~~~~ 334 (355)
T cd03819 331 LPEG 334 (355)
T ss_pred CHHH
Confidence 5543
No 96
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.87 E-value=0.023 Score=54.20 Aligned_cols=76 Identities=17% Similarity=0.313 Sum_probs=54.6
Q ss_pred Cceee-cccchhh---hccCCCcceEEe-c---CC---chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 167 RGRMI-GWAPQQK---VLNHPSIACFLS-H---CG---WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 167 ~~~v~-~~~pq~~---iL~h~~v~~fIt-H---gG---~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
++.+. +|+|..+ +|+.+++ ++. + -| -+.++||+++|+|+|+.... .....+++. +.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCC-CCEEEEC-
Confidence 44433 6887554 6888888 553 1 12 45799999999999996542 344566564 7888872
Q ss_pred CCCCCCCHHHHHHHHHHHhCC
Q 047662 236 NESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~~ 256 (301)
+.+++.++|.++++|
T Consensus 367 ------d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 ------DSEELAEQLIDLLSN 381 (415)
T ss_pred ------CHHHHHHHHHHHHhc
Confidence 689999999999988
No 97
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.85 E-value=0.022 Score=52.15 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=63.9
Q ss_pred cCCceeecccchhh---hccCCCcceEEecCCc-----hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecC
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLSHCGW-----NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKN 236 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fItHgG~-----~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~ 236 (301)
.+++.+.+++|+.+ .+..+++ ++.+.-. ++++||+++|+|+|+....+ +...+.+ .|..+..
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~- 316 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKV- 316 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecC-
Confidence 46778889998864 5666666 5554433 57999999999999876532 1222222 3333431
Q ss_pred CCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHH
Q 047662 237 ESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEW 290 (301)
Q Consensus 237 ~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~ 290 (301)
.+.+.+++.+++.+++.+++ +++..++.+.+.-+.....+++++.
T Consensus 317 ------~~~l~~~i~~l~~~~~~~~~---~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 317 ------GDDLASLLEELEADPEEVSA---MAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred ------chHHHHHHHHHHhCHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 12299999999988744433 3333333333345555555555543
No 98
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.85 E-value=0.019 Score=52.51 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=60.8
Q ss_pred cCCceeecccchh-hhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 165 SARGRMIGWAPQQ-KVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 165 ~~~~~v~~~~pq~-~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
.+++.+.++..+. .++..+++ +|.- |-.++++||+++|+|+|+....+ ....+.+ +.+..+.
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~----- 314 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSL----- 314 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeC-----
Confidence 3566677764443 47888887 4433 44679999999999999876544 2333433 4555553
Q ss_pred CCCHHHHHHHHHHHhCChHHHHHHHHHH
Q 047662 240 IITREEIKNKVDQVLGHQDFKARALELK 267 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~~~r~~a~~l~ 267 (301)
.-+.+++.++|.++++|++.+++....+
T Consensus 315 ~~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 315 DESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred CCCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 1257999999999999997766554433
No 99
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.73 E-value=0.1 Score=50.61 Aligned_cols=88 Identities=11% Similarity=0.129 Sum_probs=59.0
Q ss_pred cCCceeecccchhhhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhce----e-eeEEEeec
Q 047662 165 SARGRMIGWAPQQKVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDI----W-KVGLRFDK 235 (301)
Q Consensus 165 ~~~~~v~~~~pq~~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~----~-G~G~~l~~ 235 (301)
.+++.+.+...-..++..+++ +|.. |-.++++||+++|+|+|+-... .....+.+. + ..|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~- 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVP- 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEEC-
Confidence 356666664444557777777 5433 3457899999999999995442 233334331 1 2777774
Q ss_pred CCCCCCCHHHHHHHHHHHhCChHHHHHH
Q 047662 236 NESGIITREEIKNKVDQVLGHQDFKARA 263 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~~~~~r~~a 263 (301)
.-+.+++.++|.+++.|++.++++
T Consensus 426 ----~~d~~~la~ai~~ll~~~~~~~~~ 449 (475)
T cd03813 426 ----PADPEALARAILRLLKDPELRRAM 449 (475)
T ss_pred ----CCCHHHHHHHHHHHhcCHHHHHHH
Confidence 247899999999999998655443
No 100
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.69 E-value=0.02 Score=51.85 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=87.2
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchh-hh--hcCCceeecccchhh---hccCC
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQ-ER--VSARGRMIGWAPQQK---VLNHP 183 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~-~~--~~~~~~v~~~~pq~~---iL~h~ 183 (301)
.+.+..|.... .+....+++++...+.++++ ++.... ........ +. ..+++.+.+++++.+ +++.+
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i-~G~~~~----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKL-AGPVSD----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEE-EeCCCC----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 34555676632 23345567777777777554 443310 00001111 11 246788889998754 67788
Q ss_pred CcceEEec--CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 184 SIACFLSH--CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 184 ~v~~fItH--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
++-++-+. -| ..+++||+++|+|+|+....+ +...+.+. ..|..+. . .+++.+++.+++... +
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~-~~g~l~~----~---~~~l~~~l~~l~~~~--~ 310 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDG-VTGFLVD----S---VEELAAAVARADRLD--R 310 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCC-CcEEEeC----C---HHHHHHHHHHHhccH--H
Confidence 87333332 23 458999999999999876532 33344332 4788774 2 889999999887543 2
Q ss_pred HHHHHHHHHHHhHhhcCCChHHHHHHHHH
Q 047662 261 ARALELKEKAMSSIREGGSSRKTFQNFLE 289 (301)
Q Consensus 261 ~~a~~l~~~~~~~~~~~gss~~~l~~~v~ 289 (301)
+++++.. .+.-+......++++
T Consensus 311 ~~~~~~~-------~~~~s~~~~~~~~~~ 332 (335)
T cd03802 311 AACRRRA-------ERRFSAARMVDDYLA 332 (335)
T ss_pred HHHHHHH-------HHhCCHHHHHHHHHH
Confidence 3333322 234555555555554
No 101
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.54 E-value=0.058 Score=52.84 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=60.6
Q ss_pred CCceeecccchhhhccCCCcceEEec---CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCC-CC-
Q 047662 166 ARGRMIGWAPQQKVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNE-SG- 239 (301)
Q Consensus 166 ~~~~v~~~~pq~~iL~h~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~-~~- 239 (301)
+++.+.++.+...++..+++ ||.- =| ..+++||+++|+|+|+....+ -+...+++. ..|..+.... ..
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCccccc
Confidence 55667788777778888888 6542 23 468999999999999976421 133444443 5788875210 01
Q ss_pred CCC-HHHHHHHHHHHhCCh---HHHHHHHHH
Q 047662 240 IIT-REEIKNKVDQVLGHQ---DFKARALEL 266 (301)
Q Consensus 240 ~~~-~~~l~~av~~vl~~~---~~r~~a~~l 266 (301)
.-+ .+++.++|.++++++ .+.+++++.
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~ 480 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQI 480 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 112 778999999999544 234444443
No 102
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.19 E-value=0.18 Score=51.34 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=62.0
Q ss_pred cCCceeecccchhh-hccCCCcceEEe---cCC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 165 SARGRMIGWAPQQK-VLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 165 ~~~~~v~~~~pq~~-iL~h~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
.+++.+.+|.++.. +|..+++ ||. +-| .++++||+++|+|+|+....+ ....+.+. ..|+.+.. +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg-~~GlLv~~---~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEG-VTGLTLPA---D 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCC-CCEEEeCC---C
Confidence 46677778876544 7888887 554 333 678999999999999986532 44455553 57888863 4
Q ss_pred CCCHHHHHHHHHHHh----CChHHHHHHHHHH
Q 047662 240 IITREEIKNKVDQVL----GHQDFKARALELK 267 (301)
Q Consensus 240 ~~~~~~l~~av~~vl----~~~~~r~~a~~l~ 267 (301)
+.+.+++.+++.+++ .++.+++++++..
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 455666666665555 4567776665544
No 103
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.17 E-value=0.16 Score=53.59 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=70.3
Q ss_pred cCCceeecccchhh---hccCCC--cceEEecC---C-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 165 SARGRMIGWAPQQK---VLNHPS--IACFLSHC---G-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~--v~~fItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
.+++.+.+++++.+ ++..++ .++||.-. | -.+++||+++|+|+|+....+ ....+.+. ..|+.++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECC
Confidence 35666778877765 455442 23377642 2 468999999999999987543 22233332 57888752
Q ss_pred CCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 236 NESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
-+.+++.++|.+++.|++.+++..+-+... ++ .-+-...+.++++.+..
T Consensus 622 -----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~---v~-~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 622 -----HDQQAIADALLKLVADKQLWAECRQNGLKN---IH-LFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred -----CCHHHHHHHHHHHhhCHHHHHHHHHHHHHH---HH-HCCHHHHHHHHHHHHHH
Confidence 478999999999999986555543332221 11 23434444455555443
No 104
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.07 E-value=0.039 Score=54.23 Aligned_cols=139 Identities=17% Similarity=0.256 Sum_probs=85.2
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh------cCCceeecccchhh--
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV------SARGRMIGWAPQQK-- 178 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~------~~~~~v~~~~pq~~-- 178 (301)
+..|||.+|--....+++.++.-++-|...+..++|..+.+..-+ ..|.... ++++.+.+-+.-.+
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 445999999888888999999888889888999999998652111 1221111 24444433333222
Q ss_pred ---hccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCch-hhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHh
Q 047662 179 ---VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQ-FLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVL 254 (301)
Q Consensus 179 ---iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ-~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl 254 (301)
.|+.-.+.-+.+. |..|.++.++.|||||.+|.-.-- ..-+..+.. +|+|..+-. ++++-.+.--++-
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak------~~eEY~~iaV~La 902 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK------NREEYVQIAVRLA 902 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh------hHHHHHHHHHHhh
Confidence 3333333335554 688999999999999999985322 223333434 599987742 4555433333444
Q ss_pred CChHH
Q 047662 255 GHQDF 259 (301)
Q Consensus 255 ~~~~~ 259 (301)
.|.++
T Consensus 903 td~~~ 907 (966)
T KOG4626|consen 903 TDKEY 907 (966)
T ss_pred cCHHH
Confidence 45444
No 105
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=96.06 E-value=0.068 Score=39.29 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=53.6
Q ss_pred cCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceee-eEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHH
Q 047662 191 HCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWK-VGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEK 269 (301)
Q Consensus 191 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G-~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~ 269 (301)
++-..-++|++++|+|+|+-+. ......+.+ | .++.. . +.+++.++|..+++|++.+++..+ .
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-----~--~~~el~~~i~~ll~~~~~~~~ia~---~ 72 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-----N--DPEELAEKIEYLLENPEERRRIAK---N 72 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-----C--CHHHHHHHHHHHHCCHHHHHHHHH---H
Confidence 4455689999999999999865 333333432 4 44444 2 899999999999999965544333 2
Q ss_pred HHhHhhcCCChHHHHHHHH
Q 047662 270 AMSSIREGGSSRKTFQNFL 288 (301)
Q Consensus 270 ~~~~~~~~gss~~~l~~~v 288 (301)
.++.+.+..+....++.++
T Consensus 73 a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 73 ARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHHhCCHHHHHHHHH
Confidence 2223334666666666665
No 106
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.83 E-value=0.21 Score=49.38 Aligned_cols=113 Identities=13% Similarity=0.159 Sum_probs=65.2
Q ss_pred cCCceeecccchhh-hccCCCcceEEec---CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 165 SARGRMIGWAPQQK-VLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 165 ~~~~~v~~~~pq~~-iL~h~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
.+++.+.+|..+.. +|..+++ ||.. -| .++++||+++|+|+|+.... -+...+.+. ..|..++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~---- 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDD---- 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECC----
Confidence 46677778765443 7888888 7753 33 67999999999999987653 345555554 68888863
Q ss_pred CCCHHHHHHHH---HHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 240 IITREEIKNKV---DQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 240 ~~~~~~l~~av---~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
-+.+.+.+++ .++.... ++...+.+..++.+.+.-|....++++.+-+.
T Consensus 523 -~D~~aLa~ai~lA~aL~~ll---~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 523 -AQTVNLDQACRYAEKLVNLW---RSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred -CChhhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 1334444443 2222211 11222333344434445666666666555443
No 107
>PHA01630 putative group 1 glycosyl transferase
Probab=95.65 E-value=0.35 Score=44.78 Aligned_cols=109 Identities=17% Similarity=0.075 Sum_probs=59.4
Q ss_pred ccchhh---hccCCCcceEEecCC--chhHHHHHHhCCCcccCCCCC--chhh---hHHhhhc----------eeeeEEE
Q 047662 173 WAPQQK---VLNHPSIACFLSHCG--WNSTMEGVSNGIPFLCWPYFA--EQFL---NEKYICD----------IWKVGLR 232 (301)
Q Consensus 173 ~~pq~~---iL~h~~v~~fItHgG--~~s~~Eal~~GvP~i~~P~~~--DQ~~---Na~~~~~----------~~G~G~~ 232 (301)
++|..+ ++..+++-++-++.. ..+++||+++|+|+|+.-..+ |... |...+.. -.++|..
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 355443 677788722223322 568999999999999976543 3222 2111100 0124544
Q ss_pred eecCCCCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 233 FDKNESGIITREEIKNKVDQVLGH---QDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 233 l~~~~~~~~~~~~l~~av~~vl~~---~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
+. .+.+++.+++.+++.| ++++++...-+....+ .-|-....+++.+-+
T Consensus 277 v~------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 277 LD------PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEKIL 328 (331)
T ss_pred cC------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHH
Confidence 43 2567788888888876 4555554444433332 345444445555443
No 108
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.58 E-value=0.16 Score=49.93 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=59.1
Q ss_pred CCceeecccc--hh-hhccCCCcceEEecC---CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 166 ARGRMIGWAP--QQ-KVLNHPSIACFLSHC---GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 166 ~~~~v~~~~p--q~-~iL~h~~v~~fItHg---G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
..+.+.++.. +. .++....+ +|.=+ |.++.+||+.+|+|+| .......+++. .-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 4556667776 33 36777766 77654 6779999999999999 44455666664 7888884
Q ss_pred CCCHHHHHHHHHHHhCChHHHHH
Q 047662 240 IITREEIKNKVDQVLGHQDFKAR 262 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~~~r~~ 262 (301)
+..++.++|..+|.+.+-...
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~ 494 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNY 494 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHH
Confidence 689999999999998843333
No 109
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.38 E-value=0.31 Score=47.03 Aligned_cols=83 Identities=11% Similarity=0.125 Sum_probs=50.6
Q ss_pred cCCceee-cccchh--hhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEeec
Q 047662 165 SARGRMI-GWAPQQ--KVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 165 ~~~~~v~-~~~pq~--~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
.+++.+. ++.... .+++.+++ |+.. +-..+.+||+++|+|.|+....+ |...+...-.+. |.|+.+..
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCC
Confidence 3555544 443222 36777777 6643 11247899999999999876532 222221111122 58988853
Q ss_pred CCCCCCCHHHHHHHHHHHhC
Q 047662 236 NESGIITREEIKNKVDQVLG 255 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~ 255 (301)
-+.+++.+++.+++.
T Consensus 427 -----~~~~~l~~~i~~~l~ 441 (476)
T cd03791 427 -----YNADALLAALRRALA 441 (476)
T ss_pred -----CCHHHHHHHHHHHHH
Confidence 368999999999874
No 110
>PLN02275 transferase, transferring glycosyl groups
Probab=95.35 E-value=0.072 Score=49.89 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=52.5
Q ss_pred CCceee-cccchhh---hccCCCcceEEe-c---CC---chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEee
Q 047662 166 ARGRMI-GWAPQQK---VLNHPSIACFLS-H---CG---WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFD 234 (301)
Q Consensus 166 ~~~~v~-~~~pq~~---iL~h~~v~~fIt-H---gG---~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~ 234 (301)
+|+.+. .|+|..+ +|+.+++ |+. + .| .+.++||+++|+|+|+.... .+...+.+. +.|+.+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCC-CCeEEEC
Confidence 344544 4788765 5888888 663 1 12 45799999999999997542 255666664 7899883
Q ss_pred cCCCCCCCHHHHHHHHHHHh
Q 047662 235 KNESGIITREEIKNKVDQVL 254 (301)
Q Consensus 235 ~~~~~~~~~~~l~~av~~vl 254 (301)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4788999888764
No 111
>PRK14098 glycogen synthase; Provisional
Probab=95.32 E-value=0.32 Score=47.57 Aligned_cols=81 Identities=15% Similarity=0.042 Sum_probs=53.1
Q ss_pred hcCCceeecccchh---hhccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEee
Q 047662 164 VSARGRMIGWAPQQ---KVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFD 234 (301)
Q Consensus 164 ~~~~~~v~~~~pq~---~iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~ 234 (301)
.++++.+..+.+.. .+++.+++ |+...= ..+.+||+++|+|.|+....+ |...+ ...+. +.|..+.
T Consensus 360 ~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~ 434 (489)
T PRK14098 360 HPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFH 434 (489)
T ss_pred CCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeC
Confidence 34667777777764 47888888 665332 247889999999888876533 22211 11123 6788884
Q ss_pred cCCCCCCCHHHHHHHHHHHh
Q 047662 235 KNESGIITREEIKNKVDQVL 254 (301)
Q Consensus 235 ~~~~~~~~~~~l~~av~~vl 254 (301)
. -+.+++.++|.+++
T Consensus 435 ~-----~d~~~la~ai~~~l 449 (489)
T PRK14098 435 D-----YTPEALVAKLGEAL 449 (489)
T ss_pred C-----CCHHHHHHHHHHHH
Confidence 2 46899999998865
No 112
>PHA01633 putative glycosyl transferase group 1
Probab=95.20 E-value=0.84 Score=42.38 Aligned_cols=84 Identities=12% Similarity=0.106 Sum_probs=53.8
Q ss_pred cCCceee---cccchh---hhccCCCcceEEecC---C-chhHHHHHHhCCCcccCCC------CCch------hhhHHh
Q 047662 165 SARGRMI---GWAPQQ---KVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPY------FAEQ------FLNEKY 222 (301)
Q Consensus 165 ~~~~~v~---~~~pq~---~iL~h~~v~~fItHg---G-~~s~~Eal~~GvP~i~~P~------~~DQ------~~Na~~ 222 (301)
++++.+. ++.++. .+++.+++ |+.-. | .++++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4566666 444543 46778887 77532 3 4578999999999998633 2333 223332
Q ss_pred hhc-eeeeEEEeecCCCCCCCHHHHHHHHHHHhC
Q 047662 223 ICD-IWKVGLRFDKNESGIITREEIKNKVDQVLG 255 (301)
Q Consensus 223 ~~~-~~G~G~~l~~~~~~~~~~~~l~~av~~vl~ 255 (301)
..+ .-|.|..++ ..+++++.++|.+++.
T Consensus 278 ~~~~~~g~g~~~~-----~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 278 YYDKEHGQKWKIH-----KFQIEDMANAIILAFE 306 (335)
T ss_pred hcCcccCceeeec-----CCCHHHHHHHHHHHHh
Confidence 222 126677763 4689999999999853
No 113
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.10 E-value=0.23 Score=46.56 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=78.3
Q ss_pred CceEEEEecCCc---cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh--cCCceeecc---cchhhh
Q 047662 108 SSVLYAAFGSFT---ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV--SARGRMIGW---APQQKV 179 (301)
Q Consensus 108 ~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~---~pq~~i 179 (301)
+++++|++=... ....+.+.++++++...+..+++....... ....+-+.+.+.. .+++.+.+- .....+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p--~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA--GSRIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC--CchHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 458888885542 344678999999997776665555421100 0000111111111 245666654 444558
Q ss_pred ccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEE-eecCCCCCCCHHHHHHHHHHHhCChH
Q 047662 180 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLR-FDKNESGIITREEIKNKVDQVLGHQD 258 (301)
Q Consensus 180 L~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~-l~~~~~~~~~~~~l~~av~~vl~~~~ 258 (301)
+.++++ +||-.+.+- .||.+.|+|.|.+- +.+ .-+ +. |..+. +. .+.++|.+++++++ +++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~~-g~nvl~vg------~~~~~I~~a~~~~~-~~~ 340 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-LR-ADSVIDVD------PDKEEIVKAIEKLL-DPA 340 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-hh-cCeEEEeC------CCHHHHHHHHHHHh-ChH
Confidence 889998 998775544 99999999999763 322 111 22 43333 32 47899999999955 444
Q ss_pred HHH
Q 047662 259 FKA 261 (301)
Q Consensus 259 ~r~ 261 (301)
+++
T Consensus 341 ~~~ 343 (365)
T TIGR03568 341 FKK 343 (365)
T ss_pred HHH
Confidence 433
No 114
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=95.07 E-value=0.2 Score=49.77 Aligned_cols=220 Identities=14% Similarity=0.097 Sum_probs=108.2
Q ss_pred ccEEEEcCcccccchh-hhcCCCCCCCCccccCCCCCCCCCCCCCCCcchHHHhhcCCCCceEEEEecCCccCCHHHHHH
Q 047662 50 VNFQLCHSTYELESEA-FTVVPELLPIGPLLAGNRLGNSAGHFWREDSSCLEWLDQQQPSSVLYAAFGSFTILDQVQFQE 128 (301)
Q Consensus 50 ~~~vl~ns~~~le~~~-~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~ 128 (301)
.|.+++== .+|.+. ....-++.|||--..+.... .+...+..+-+.-.+++++|-+--||-..--...+..
T Consensus 362 vD~ll~If--PFE~~~y~~~gv~v~yVGHPL~d~i~~------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv 433 (608)
T PRK01021 362 LDLLLLIL--PFEQNLFKDSPLRTVYLGHPLVETISS------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTI 433 (608)
T ss_pred hhhheecC--ccCHHHHHhcCCCeEEECCcHHhhccc------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 35544422 344332 33455888999444332210 0111222222333345579999999953211223344
Q ss_pred HHHHHh--h--CCCCEEEEEcCCCCCCCCCCCCCchhhhhcC-C---ceeecccchhhhccCCCcceEEecCCchhHHHH
Q 047662 129 LAFGLE--L--CNRPFLWVVRPDITTDANDRYPDGFQERVSA-R---GRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEG 200 (301)
Q Consensus 129 ~~~al~--~--~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~-~---~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Ea 200 (301)
++++.+ . .+..|+....+. . ..+.+.+...+ + +.+..--...++++.+++ .+.-+|. .++|+
T Consensus 434 ~l~aa~~~~l~~~l~fvvp~a~~----~---~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEa 503 (608)
T PRK01021 434 QVQAFLASSLASTHQLLVSSANP----K---YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLET 503 (608)
T ss_pred HHHHHHHHHhccCeEEEEecCch----h---hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHH
Confidence 555544 2 234555433221 0 01111111211 1 122210012467888887 6666664 57899
Q ss_pred HHhCCCcccCCCCC-chhhhHHhhhc----eee-----eEEEeecC---CCCCCCHHHHHHHHHHHhCChHHHHHHHHHH
Q 047662 201 VSNGIPFLCWPYFA-EQFLNEKYICD----IWK-----VGLRFDKN---ESGIITREEIKNKVDQVLGHQDFKARALELK 267 (301)
Q Consensus 201 l~~GvP~i~~P~~~-DQ~~Na~~~~~----~~G-----~G~~l~~~---~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~ 267 (301)
...|+|||++=-.. =-+.-++++.+ ..+ +|..+-++ +.++.+++.|.+++ ++|.|++.+++.++--
T Consensus 504 AL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l 582 (608)
T PRK01021 504 ALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDAC 582 (608)
T ss_pred HHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 99999999852211 11123444433 101 11111110 02468999999997 8888887776666666
Q ss_pred HHHHhHhhcCCChHHHHHHHH
Q 047662 268 EKAMSSIREGGSSRKTFQNFL 288 (301)
Q Consensus 268 ~~~~~~~~~~gss~~~l~~~v 288 (301)
+.+++...+|-++.+.....+
T Consensus 583 ~~lr~~Lg~~~~~~~~~~~~~ 603 (608)
T PRK01021 583 RDLYQAMNESASTMKECLSLI 603 (608)
T ss_pred HHHHHHhcCCCCCHHHHHHHH
Confidence 666666666666655444443
No 115
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.05 E-value=0.23 Score=46.72 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=66.9
Q ss_pred hhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCC-chhhhHHhhhceeeeEE--Eeec-----C-CCCCCCHHHH
Q 047662 176 QQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFA-EQFLNEKYICDIWKVGL--RFDK-----N-ESGIITREEI 246 (301)
Q Consensus 176 q~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~-DQ~~Na~~~~~~~G~G~--~l~~-----~-~~~~~~~~~l 246 (301)
-.+++..+++ .+.-.| ..++|+...|+|||++=-.. =-+.-++++.+.-=+|+ .+-. + =.+..+.+.+
T Consensus 254 ~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i 330 (373)
T PF02684_consen 254 SYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENI 330 (373)
T ss_pred hHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHH
Confidence 4457777776 444444 46789999999999863221 12234555533201111 1100 0 0246799999
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHH
Q 047662 247 KNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTF 284 (301)
Q Consensus 247 ~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l 284 (301)
.+++.+++.|++.++......+.+++..+.+.++....
T Consensus 331 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (373)
T PF02684_consen 331 AAELLELLENPEKRKKQKELFREIRQLLGPGASSRAAQ 368 (373)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhhhccCCHHHH
Confidence 99999999999777777777777777766677665443
No 116
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.77 E-value=0.45 Score=46.02 Aligned_cols=132 Identities=9% Similarity=0.049 Sum_probs=70.3
Q ss_pred eEEEEecCCcc-CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCch---hhhhcCCceeecccchh---hhccC
Q 047662 110 VLYAAFGSFTI-LDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGF---QERVSARGRMIGWAPQQ---KVLNH 182 (301)
Q Consensus 110 vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~---~~~~~~~~~v~~~~pq~---~iL~h 182 (301)
.+++..|.... ...+.+.+.+..+...+.++++ +|... ..+.+.+ ..+.+.++.+....+.. .+++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi-~G~g~-----~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 365 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVV-LGTGD-----PELEEALRELAERYPGNVRVIIGYDEALAHLIYAG 365 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEE-ECCCC-----HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHh
Confidence 45666677643 2333333333334334555554 33320 0111111 12223455554434443 37778
Q ss_pred CCcceEEecC---Cc-hhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhC
Q 047662 183 PSIACFLSHC---GW-NSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLG 255 (301)
Q Consensus 183 ~~v~~fItHg---G~-~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~ 255 (301)
+++ |+.-. |. .+.+||+++|+|.|+....+ |...+...-... +.|+.+.. -+.+++.++|.+++.
T Consensus 366 aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~-----~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 366 ADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEE-----YDPGALLAALSRALR 436 (473)
T ss_pred CCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCC-----CCHHHHHHHHHHHHH
Confidence 887 66432 32 47899999999999876532 222111000121 67888842 478899999999886
No 117
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=94.67 E-value=0.29 Score=46.94 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=97.8
Q ss_pred HHhhcCCCCceEEEEecCCccC------C-H---HHHHHHHHHHhhCCCCEEEEEcCC-CCC--CCCCCCCCchhhhhcC
Q 047662 100 EWLDQQQPSSVLYAAFGSFTIL------D-Q---VQFQELAFGLELCNRPFLWVVRPD-ITT--DANDRYPDGFQERVSA 166 (301)
Q Consensus 100 ~~l~~~~~~~vvyvs~GS~~~~------~-~---~~~~~~~~al~~~~~~~iw~~~~~-~~~--~~~~~lp~~~~~~~~~ 166 (301)
.|+.....+++|-|+....... . . +.+.++++.|...|+++++..--. ... .+....-..+.+.++.
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 3444333445787776544211 2 1 234455666666688877664211 000 0000000122223322
Q ss_pred --Ccee-e-cccchh--hhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEE-eecCCCC
Q 047662 167 --RGRM-I-GWAPQQ--KVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLR-FDKNESG 239 (301)
Q Consensus 167 --~~~v-~-~~~pq~--~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~-l~~~~~~ 239 (301)
+..+ . .+-|.. .+++++++ +|.. =.-++.=|+..|||.+++++ |...... +.+ +|..-. ++ ..
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~~-~~~-lg~~~~~~~---~~ 375 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSAGI-MQQ-LGLPEMAID---IR 375 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHHHH-HHH-cCCccEEec---hh
Confidence 2233 2 333443 57888876 6653 35567778899999999998 4443332 233 466644 43 35
Q ss_pred CCCHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 240 IITREEIKNKVDQVLGHQ-DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~-~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
.++.+++.+.+.+++.|. ++++..++.-+.+++ .+.....++++.+.
T Consensus 376 ~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 678899999999999886 566665555555554 34555566666554
No 118
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.04 E-value=0.072 Score=40.15 Aligned_cols=51 Identities=10% Similarity=0.117 Sum_probs=42.0
Q ss_pred chHHHhhcCCCCceEEEEecCCccC---CH--HHHHHHHHHHhhCCCCEEEEEcCC
Q 047662 97 SCLEWLDQQQPSSVLYAAFGSFTIL---DQ--VQFQELAFGLELCNRPFLWVVRPD 147 (301)
Q Consensus 97 ~~~~~l~~~~~~~vvyvs~GS~~~~---~~--~~~~~~~~al~~~~~~~iw~~~~~ 147 (301)
.+..|+...+.++.|+||+||.... .. ..+..++++++..+..++..+...
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 4457999989999999999998543 22 478899999999999999998755
No 119
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.78 E-value=1.1 Score=43.35 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=50.8
Q ss_pred cCCcee-ecccchh--hhccCCCcceEEec---CCc-hhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEeec
Q 047662 165 SARGRM-IGWAPQQ--KVLNHPSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 165 ~~~~~v-~~~~pq~--~iL~h~~v~~fItH---gG~-~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
+.++.+ .+|-.+. .+++.+++ |+.- -|. .+.+||+++|+|.|+....+ |...+...-.+. +.|+.++.
T Consensus 336 ~~~v~~~~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~ 412 (466)
T PRK00654 336 PGKVGVQIGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDD 412 (466)
T ss_pred CCcEEEEEeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCC
Confidence 344433 3553222 46788888 6643 122 48999999999999875432 322111111222 67888852
Q ss_pred CCCCCCCHHHHHHHHHHHhC
Q 047662 236 NESGIITREEIKNKVDQVLG 255 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl~ 255 (301)
-+.+++.++|.+++.
T Consensus 413 -----~d~~~la~~i~~~l~ 427 (466)
T PRK00654 413 -----FNAEDLLRALRRALE 427 (466)
T ss_pred -----CCHHHHHHHHHHHHH
Confidence 368999999999875
No 120
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=93.57 E-value=1.8 Score=40.16 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=77.7
Q ss_pred CCcchHHHhhcCCCCceEEEEecCC-c---cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCce
Q 047662 94 EDSSCLEWLDQQQPSSVLYAAFGSF-T---ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGR 169 (301)
Q Consensus 94 ~~~~~~~~l~~~~~~~vvyvs~GS~-~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~ 169 (301)
.|.+..+-+.. ++.+.|+|=+.+. + ......+.++++.|++.+..++..-+... ...+.+.+ ++.
T Consensus 166 Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~----~~~~~~~~------~~~ 234 (335)
T PF04007_consen 166 PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED----QRELFEKY------GVI 234 (335)
T ss_pred CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc----hhhHHhcc------Ccc
Confidence 34444444442 2456888877774 2 12334567888989888776444433220 01111111 122
Q ss_pred ee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHH
Q 047662 170 MI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKN 248 (301)
Q Consensus 170 v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~ 248 (301)
+. .-+.-.++|.++++ +|+-|| ....||...|+|.|.+ +-++-...-+.+.+. |.-... -+.+++.+
T Consensus 235 i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gll~~~-------~~~~ei~~ 302 (335)
T PF04007_consen 235 IPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GLLYHS-------TDPDEIVE 302 (335)
T ss_pred ccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CCeEec-------CCHHHHHH
Confidence 22 33444579999998 999776 7889999999999974 212222223445554 653222 36777766
Q ss_pred HHHHHh
Q 047662 249 KVDQVL 254 (301)
Q Consensus 249 av~~vl 254 (301)
.|++.+
T Consensus 303 ~v~~~~ 308 (335)
T PF04007_consen 303 YVRKNL 308 (335)
T ss_pred HHHHhh
Confidence 555443
No 121
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.49 E-value=0.56 Score=43.94 Aligned_cols=107 Identities=18% Similarity=0.240 Sum_probs=76.5
Q ss_pred Cceee---cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCH
Q 047662 167 RGRMI---GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITR 243 (301)
Q Consensus 167 ~~~v~---~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~ 243 (301)
++.+. +|.+...++.++-+ ++|-.|. -.-||...|+|.+++=...+++. .+ +. |.-+.+. .+.
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg------~~~ 328 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVG------TDE 328 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC------ccH
Confidence 46554 57778889999877 8887763 46789999999999988888886 33 33 6666664 477
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHH
Q 047662 244 EEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLI 292 (301)
Q Consensus 244 ~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~ 292 (301)
+.|.+++.+++++++..+|......-+-+ |. +.+.+.+.+....
T Consensus 329 ~~i~~~~~~ll~~~~~~~~m~~~~npYgd----g~-as~rIv~~l~~~~ 372 (383)
T COG0381 329 ENILDAATELLEDEEFYERMSNAKNPYGD----GN-ASERIVEILLNYF 372 (383)
T ss_pred HHHHHHHHHHhhChHHHHHHhcccCCCcC----cc-hHHHHHHHHHHHh
Confidence 99999999999999988887665555433 33 3444444444433
No 122
>PLN02949 transferase, transferring glycosyl groups
Probab=93.29 E-value=0.57 Score=45.50 Aligned_cols=79 Identities=18% Similarity=0.071 Sum_probs=51.2
Q ss_pred cCCceeecccchhh---hccCCCcceEEe---cCC-chhHHHHHHhCCCcccCCCCC---chhhhHHhhhceeeeEEEee
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFA---EQFLNEKYICDIWKVGLRFD 234 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~---DQ~~Na~~~~~~~G~G~~l~ 234 (301)
.+++.+.+++|+.+ +|..+++ ++. +=| -.++.||+++|+|.|+....+ |...+. ..-..|....
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l~~ 407 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFLAT 407 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCcccccCC
Confidence 46777888887664 6778877 552 122 237999999999999986543 111110 0001344331
Q ss_pred cCCCCCCCHHHHHHHHHHHhCC
Q 047662 235 KNESGIITREEIKNKVDQVLGH 256 (301)
Q Consensus 235 ~~~~~~~~~~~l~~av~~vl~~ 256 (301)
+.+++.++|.+++.+
T Consensus 408 -------~~~~la~ai~~ll~~ 422 (463)
T PLN02949 408 -------TVEEYADAILEVLRM 422 (463)
T ss_pred -------CHHHHHHHHHHHHhC
Confidence 689999999999974
No 123
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=92.72 E-value=0.32 Score=46.40 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=54.5
Q ss_pred cCCceeecccchhh---hccCCCcceEEe-----cCCchhHHHHHHhCCCcccCCCCCchhhhHHhhh---ceeeeEEEe
Q 047662 165 SARGRMIGWAPQQK---VLNHPSIACFLS-----HCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYIC---DIWKVGLRF 233 (301)
Q Consensus 165 ~~~~~v~~~~pq~~---iL~h~~v~~fIt-----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~---~~~G~G~~l 233 (301)
.+++.+.+++|+.+ +|..+++ +|+ |-| .+++||+++|+|.|+.-..+.- ...+. +. ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEe
Confidence 46778888888664 7888887 443 233 4889999999999986543211 11222 22 577765
Q ss_pred ecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 234 DKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 234 ~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
. +.+++.++|.++++++
T Consensus 377 ~-------d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S-------TAEEYAEAIEKILSLS 393 (419)
T ss_pred C-------CHHHHHHHHHHHHhCC
Confidence 2 7899999999999865
No 124
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.46 E-value=2.4 Score=40.35 Aligned_cols=101 Identities=12% Similarity=-0.030 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhCCCC-EEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccc-h---hhhccCCCcceEEec----CCc
Q 047662 124 VQFQELAFGLELCNRP-FLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAP-Q---QKVLNHPSIACFLSH----CGW 194 (301)
Q Consensus 124 ~~~~~~~~al~~~~~~-~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~p-q---~~iL~h~~v~~fItH----gG~ 194 (301)
..+..+++++...+.. -++.+|... . .. ..++...++.. + ..+++.+++ ||.- |-.
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~----~-~~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFS----P-FT--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCC----c-cc--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 3356678888665443 345555420 0 01 12233334432 2 235666666 6653 335
Q ss_pred hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHH
Q 047662 195 NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKV 250 (301)
Q Consensus 195 ~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av 250 (301)
++++||+++|+|+|+....+ ....+ +. +.|+.++. -+.+++.+++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~-----~d~~~La~~~ 365 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSE-----EEVLQLAQLS 365 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECC-----CCHHHHHhcc
Confidence 68999999999999998765 12223 33 57888853 2567777643
No 125
>PLN02501 digalactosyldiacylglycerol synthase
Probab=92.13 E-value=0.81 Score=46.40 Aligned_cols=78 Identities=17% Similarity=0.205 Sum_probs=52.1
Q ss_pred ceeecccchh-hhccCCCcceEEecC----CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCC
Q 047662 168 GRMIGWAPQQ-KVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIIT 242 (301)
Q Consensus 168 ~~v~~~~pq~-~iL~h~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~ 242 (301)
+.+.++.++. .++...++ ||.-. =.++++||+++|+|+|+.-.-+... +.+. +.|... -+
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGll~-------~D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCLTY-------KT 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeEec-------CC
Confidence 3445666654 37888887 76532 2568999999999999987754321 2221 333322 26
Q ss_pred HHHHHHHHHHHhCChHHH
Q 047662 243 REEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 243 ~~~l~~av~~vl~~~~~r 260 (301)
.+++.++|.+++.++..+
T Consensus 668 ~EafAeAI~~LLsd~~~r 685 (794)
T PLN02501 668 SEDFVAKVKEALANEPQP 685 (794)
T ss_pred HHHHHHHHHHHHhCchhh
Confidence 899999999999887533
No 126
>PLN02846 digalactosyldiacylglycerol synthase
Probab=91.93 E-value=4.4 Score=39.37 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=50.8
Q ss_pred ecccchhhhccCCCcceEEec----CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHH
Q 047662 171 IGWAPQQKVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEI 246 (301)
Q Consensus 171 ~~~~pq~~iL~h~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l 246 (301)
.++.+...++...++ ||.- +=.++++||+++|+|+|+.-..+ | ..+.+. +.|.... +.+++
T Consensus 289 ~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~-------~~~~~ 353 (462)
T PLN02846 289 PGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD-------DGKGF 353 (462)
T ss_pred CCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC-------CHHHH
Confidence 355555568888877 8876 34678999999999999986543 2 333332 5555552 58899
Q ss_pred HHHHHHHhCCh
Q 047662 247 KNKVDQVLGHQ 257 (301)
Q Consensus 247 ~~av~~vl~~~ 257 (301)
.+++.++|.++
T Consensus 354 a~ai~~~l~~~ 364 (462)
T PLN02846 354 VRATLKALAEE 364 (462)
T ss_pred HHHHHHHHccC
Confidence 99999999754
No 127
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=91.85 E-value=0.51 Score=46.27 Aligned_cols=120 Identities=17% Similarity=0.187 Sum_probs=76.0
Q ss_pred CCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh------cCCceeecccchhh-
Q 047662 106 QPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV------SARGRMIGWAPQQK- 178 (301)
Q Consensus 106 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~------~~~~~v~~~~pq~~- 178 (301)
++.-+||+||+......++.+..=.+-|...+--++|..+++.. ...-..+.+.. .++..+.+-.|...
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~----~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD----AEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc----HHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 34569999999999889998888777788888889998876411 11111111111 23344444444333
Q ss_pred --hccCCCcceEE---ecCCchhHHHHHHhCCCcccCCCCCchhh--hHHhhhceeeeEEEe
Q 047662 179 --VLNHPSIACFL---SHCGWNSTMEGVSNGIPFLCWPYFAEQFL--NEKYICDIWKVGLRF 233 (301)
Q Consensus 179 --iL~h~~v~~fI---tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~--Na~~~~~~~G~G~~l 233 (301)
=++-+++ |+ --||+.|..|++..|||+|.++ ++||. |+..+....|+-..+
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 2333343 54 4699999999999999999875 67765 444444333555444
No 128
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=91.63 E-value=0.74 Score=38.46 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=35.7
Q ss_pred cCCceeecccch-h--h-hccCCCcceEEecCC----chhHHHHHHhCCCcccCCCCCc
Q 047662 165 SARGRMIGWAPQ-Q--K-VLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFAE 215 (301)
Q Consensus 165 ~~~~~v~~~~pq-~--~-iL~h~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~D 215 (301)
.+|+.+.++++. . . ++..+++ +++... .++++||+++|+|+|+.+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 467778888632 2 2 4444777 777666 7899999999999999887543
No 129
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.50 E-value=1.4 Score=40.52 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=41.2
Q ss_pred chhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhh----hHHhhhceeeeEEEee
Q 047662 175 PQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFL----NEKYICDIWKVGLRFD 234 (301)
Q Consensus 175 pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~----Na~~~~~~~G~G~~l~ 234 (301)
|....|+.++. +|||--..+.+.||++.|+|+.++|+-. +.. -.+.+.+. |.-..+.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~-g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEER-GAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHC-CCEEECC
Confidence 55568888776 5778778899999999999999999876 221 23344443 7666664
No 130
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=90.46 E-value=2 Score=39.16 Aligned_cols=142 Identities=10% Similarity=0.071 Sum_probs=77.6
Q ss_pred HHhhcCCCCceEEEEecCC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecc--c
Q 047662 100 EWLDQQQPSSVLYAAFGSF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGW--A 174 (301)
Q Consensus 100 ~~l~~~~~~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~--~ 174 (301)
.++....+++.|.+..|+. -.++.+.+.++++.|...++++++..+++.+ ...-+.+.+..+.. .+.+- +
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e----~~~~~~i~~~~~~~-~l~g~~sL 245 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAE----KQRAERIAEALPGA-VVLPKMSL 245 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHH----HHHHHHHHhhCCCC-eecCCCCH
Confidence 3444333445666666653 3478899999999997667777765553311 00111121111211 22222 3
Q ss_pred chh-hhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeE-EEeecCCCCCCCHHHHHHHHHH
Q 047662 175 PQQ-KVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVG-LRFDKNESGIITREEIKNKVDQ 252 (301)
Q Consensus 175 pq~-~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G-~~l~~~~~~~~~~~~l~~av~~ 252 (301)
+|. .+++++++ ||+. -.+.++=|.+.|+|.|++ ++ +.+..+..= +|.. ..+.......++.+++.+++++
T Consensus 246 ~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~ 317 (319)
T TIGR02193 246 AEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEE 317 (319)
T ss_pred HHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHh
Confidence 333 38888888 8885 456777788899999975 22 111111100 1211 1111112467899999999987
Q ss_pred Hh
Q 047662 253 VL 254 (301)
Q Consensus 253 vl 254 (301)
+|
T Consensus 318 ~~ 319 (319)
T TIGR02193 318 LL 319 (319)
T ss_pred hC
Confidence 64
No 131
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=89.06 E-value=4.5 Score=38.98 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=64.0
Q ss_pred CCceee-cccc-hh-hhccCCCcceEEecCC--chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 166 ARGRMI-GWAP-QQ-KVLNHPSIACFLSHCG--WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~-~~~p-q~-~iL~h~~v~~fItHgG--~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
+|+.+. ++.+ +. .++..+++=+-|+|+. .+++.||+.+|+|+++.=.... +...+.+ |..+. .
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~----g~l~~-----~ 395 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS----ENIFE-----H 395 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC----Cceec-----C
Confidence 555554 6777 33 4999999988889877 6799999999999998754322 1122222 44453 2
Q ss_pred CCHHHHHHHHHHHhCCh-HHHHHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQ-DFKARALELKEKA 270 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~-~~r~~a~~l~~~~ 270 (301)
-+.+++.++|+++|.++ .++++..+-++.+
T Consensus 396 ~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 396 NEVDQLISKLKDLLNDPNQFRELLEQQREHA 426 (438)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 36899999999999998 4566555544443
No 132
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=88.53 E-value=3 Score=39.11 Aligned_cols=109 Identities=18% Similarity=0.166 Sum_probs=57.1
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccCCCCC-chhhhHHhhhceeeeEE-------EeecC-CCCCCCHHHHHHH
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFA-EQFLNEKYICDIWKVGL-------RFDKN-ESGIITREEIKNK 249 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~-DQ~~Na~~~~~~~G~G~-------~l~~~-~~~~~~~~~l~~a 249 (301)
++..+++ .+.-+|. -++|+..+|+|||+.=-.. =-+.-+++....+=++. .+-++ -....+++.|.++
T Consensus 261 a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~ 337 (381)
T COG0763 261 AFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARA 337 (381)
T ss_pred HHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHH
Confidence 5666666 5555554 5689999999999742111 01112333333211111 11000 0245789999999
Q ss_pred HHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHH
Q 047662 250 VDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEW 290 (301)
Q Consensus 250 v~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~ 290 (301)
+.+++.|+.-++..++--+.++..++.++++....+.+++.
T Consensus 338 l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~ 378 (381)
T COG0763 338 LEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVLEL 378 (381)
T ss_pred HHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 99999988333333333333333344454555555555444
No 133
>PLN00142 sucrose synthase
Probab=88.13 E-value=4.1 Score=42.26 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=43.7
Q ss_pred EEec---CC-chhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH----hCChHH
Q 047662 188 FLSH---CG-WNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV----LGHQDF 259 (301)
Q Consensus 188 fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v----l~~~~~ 259 (301)
||.- =| -.+++||+++|+|+|+....+ ....+.+. ..|..++. -+.+++.++|.++ +.|++.
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG-~tG~LV~P-----~D~eaLA~aI~~lLekLl~Dp~l 739 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDG-VSGFHIDP-----YHGDEAANKIADFFEKCKEDPSY 739 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCC-----CCHHHHHHHHHHHHHHhcCCHHH
Confidence 6653 23 348999999999999976543 44455553 57888853 3677777777654 467765
Q ss_pred HHH
Q 047662 260 KAR 262 (301)
Q Consensus 260 r~~ 262 (301)
+++
T Consensus 740 r~~ 742 (815)
T PLN00142 740 WNK 742 (815)
T ss_pred HHH
Confidence 544
No 134
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=87.35 E-value=4.7 Score=41.72 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=54.2
Q ss_pred CCceeeccc-chh---hhccC-CC-cceEEecC----CchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeec
Q 047662 166 ARGRMIGWA-PQQ---KVLNH-PS-IACFLSHC----GWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDK 235 (301)
Q Consensus 166 ~~~~v~~~~-pq~---~iL~h-~~-v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~ 235 (301)
+++.+.++. +.. .++.+ ++ .++||.-. --.+++||+++|+|+|+.-..+ ....+.+. ..|..++.
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCC
Confidence 556655653 322 24432 21 23376532 2458999999999999875543 44455554 67888853
Q ss_pred CCCCCCCHHHHHHHHHHHh----CChHHHHH
Q 047662 236 NESGIITREEIKNKVDQVL----GHQDFKAR 262 (301)
Q Consensus 236 ~~~~~~~~~~l~~av~~vl----~~~~~r~~ 262 (301)
-+.+++.++|.+++ .|++.+++
T Consensus 694 -----~D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 694 -----YHGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred -----CCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36788999988876 57655444
No 135
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.96 E-value=4.6 Score=36.87 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=43.7
Q ss_pred HHHHhCCCcccCCCCCchhh--hHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHH
Q 047662 199 EGVSNGIPFLCWPYFAEQFL--NEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALE 265 (301)
Q Consensus 199 Eal~~GvP~i~~P~~~DQ~~--Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~ 265 (301)
.++--|+|+|.+|-.+-|+. .|.+=..-+|+.+.+-. -....-..++++++.|+.+.++++.
T Consensus 325 QavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-----~~aq~a~~~~q~ll~dp~r~~air~ 388 (412)
T COG4370 325 QAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-----PEAQAAAQAVQELLGDPQRLTAIRH 388 (412)
T ss_pred HhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-----CchhhHHHHHHHHhcChHHHHHHHh
Confidence 35667999999999999986 45555566788888852 1233344455569999988777663
No 136
>PLN02939 transferase, transferring glycosyl groups
Probab=85.96 E-value=25 Score=37.24 Aligned_cols=91 Identities=9% Similarity=0.093 Sum_probs=56.6
Q ss_pred CCceeecccchh---hhccCCCcceEEecC----CchhHHHHHHhCCCcccCCCCC--chhhh--HHhhhceeeeEEEee
Q 047662 166 ARGRMIGWAPQQ---KVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFA--EQFLN--EKYICDIWKVGLRFD 234 (301)
Q Consensus 166 ~~~~v~~~~pq~---~iL~h~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~--DQ~~N--a~~~~~~~G~G~~l~ 234 (301)
+++.+..+.+.. .+++.+++ |+... -..+.+||+++|+|.|+....+ |...+ ...+...-+.|..+.
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 456666777654 47888887 77532 2347899999999999876643 32221 111111125787774
Q ss_pred cCCCCCCCHHHHHHHHHHHhC----ChHHHHHH
Q 047662 235 KNESGIITREEIKNKVDQVLG----HQDFKARA 263 (301)
Q Consensus 235 ~~~~~~~~~~~l~~av~~vl~----~~~~r~~a 263 (301)
. -+.+++..+|.+++. |++.+++.
T Consensus 915 ~-----~D~eaLa~AL~rAL~~~~~dpe~~~~L 942 (977)
T PLN02939 915 T-----PDEQGLNSALERAFNYYKRKPEVWKQL 942 (977)
T ss_pred C-----CCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 2 478888888888764 55544443
No 137
>PLN02316 synthase/transferase
Probab=84.07 E-value=37 Score=36.41 Aligned_cols=116 Identities=8% Similarity=0.035 Sum_probs=66.6
Q ss_pred CCceeecccchh---hhccCCCcceEEecC----CchhHHHHHHhCCCcccCCCCC--chhhh-------HHhhhceeee
Q 047662 166 ARGRMIGWAPQQ---KVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFA--EQFLN-------EKYICDIWKV 229 (301)
Q Consensus 166 ~~~~v~~~~pq~---~iL~h~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~--DQ~~N-------a~~~~~~~G~ 229 (301)
+++.+....+.. .+++.+++ |+... =-.+.+||+++|.|.|+....+ |.... ++..... +.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-Cc
Confidence 445554333433 47777777 77432 2458999999999888765432 22211 1111111 57
Q ss_pred EEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 230 GLRFDKNESGIITREEIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 230 G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
|..+. ..+.+.+..+|.+++.+ |.+....+++..+.++...-|-...+.++++-.
T Consensus 977 Gflf~-----~~d~~aLa~AL~raL~~--~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY 1031 (1036)
T PLN02316 977 GFSFD-----GADAAGVDYALNRAISA--WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELY 1031 (1036)
T ss_pred eEEeC-----CCCHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 88884 34788999999999864 233333345555554444555555555554433
No 138
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=83.33 E-value=5.7 Score=38.48 Aligned_cols=100 Identities=12% Similarity=0.121 Sum_probs=63.7
Q ss_pred cccchhh---hccCCCcceEEe---cCCc-hhHHHHHHhCCC----cccCCCCCchhhhHHhhhceeeeEEEeecCCCCC
Q 047662 172 GWAPQQK---VLNHPSIACFLS---HCGW-NSTMEGVSNGIP----FLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGI 240 (301)
Q Consensus 172 ~~~pq~~---iL~h~~v~~fIt---HgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~ 240 (301)
..+++.+ ++..+++ |+. +=|. .++.||+++|+| +|+--..+- +..+ +.|+.++ .
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVn-----P 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVN-----P 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEEC-----C
Confidence 3455554 5777777 664 3354 478899999999 555444332 2222 3467774 3
Q ss_pred CCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
.+.+++.++|.++++.+ +.+++.+++.+.+.. .+...-..++++++
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l 454 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDL 454 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHh
Confidence 47899999999999754 566666666665443 45555566666655
No 139
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.33 E-value=8.9 Score=39.95 Aligned_cols=103 Identities=14% Similarity=0.037 Sum_probs=62.7
Q ss_pred hhccCCCcceEEec---CCch-hHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 178 KVLNHPSIACFLSH---CGWN-STMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 178 ~iL~h~~v~~fItH---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
.+++.+++ |+.- -|+| .++|++++|.|-=+.++..+---.+..+ . ..|+.+. ..+.+++.++|.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-~--~~allVn-----P~D~~~lA~AI~~a 440 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-G--AGALLVN-----PWNITEVSSAIKEA 440 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-c--CCeEEEC-----CCCHHHHHHHHHHH
Confidence 36777777 6643 4766 6679999999922222222222222222 1 2577774 35899999999999
Q ss_pred hC-Ch-HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhcc
Q 047662 254 LG-HQ-DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFFN 295 (301)
Q Consensus 254 l~-~~-~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~~ 295 (301)
|+ ++ +.+++.+++.+.++. .+...-...|++.+.+..
T Consensus 441 L~m~~~er~~r~~~~~~~v~~-----~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 441 LNMSDEERETRHRHNFQYVKT-----HSAQKWADDFMSELNDII 479 (797)
T ss_pred HhCCHHHHHHHHHHHHHhhhh-----CCHHHHHHHHHHHHHHHh
Confidence 98 44 445556656555543 355555666776665543
No 140
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=80.09 E-value=27 Score=28.49 Aligned_cols=139 Identities=13% Similarity=0.128 Sum_probs=69.6
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEE
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFL 189 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fI 189 (301)
.|-|-+||.+ +....++....|+..+..+-..+-+. ...|+.+. .++.. +.+...++||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~----------~~~~~---~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLL----------EFVKE---YEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHH----------HHHHH---TTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHH----------HHHHH---hccCCCEEEE
Confidence 4666677744 56778888888988886655544322 22333322 11111 2222344588
Q ss_pred ecCCchh----HHHHHHhCCCcccCCCCCchhhhH----HhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHH
Q 047662 190 SHCGWNS----TMEGVSNGIPFLCWPYFAEQFLNE----KYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKA 261 (301)
Q Consensus 190 tHgG~~s----~~Eal~~GvP~i~~P~~~DQ~~Na----~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~ 261 (301)
.=.|... +.-++. -.|+|++|....+.... ..++---|+++..-.- ++..+...+...|-. +.|+++++
T Consensus 61 a~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i-~~~~nAA~~A~~ILa-~~d~~l~~ 137 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI-NNGFNAALLAARILA-LKDPELRE 137 (150)
T ss_dssp EEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS-THHHHHHHHHHHHHH-TT-HHHHH
T ss_pred EECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc-cCchHHHHHHHHHHh-cCCHHHHH
Confidence 8887653 444433 78999999876644321 2222212555544210 011122222222221 36789999
Q ss_pred HHHHHHHHHHh
Q 047662 262 RALELKEKAMS 272 (301)
Q Consensus 262 ~a~~l~~~~~~ 272 (301)
+.+..++.+++
T Consensus 138 kl~~~~~~~~~ 148 (150)
T PF00731_consen 138 KLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99998888775
No 141
>PRK14099 glycogen synthase; Provisional
Probab=79.18 E-value=43 Score=32.70 Aligned_cols=87 Identities=9% Similarity=0.119 Sum_probs=48.1
Q ss_pred eecccchhh-hc-cCCCcceEEec---CC-chhHHHHHHhCCCcccCCCCC--chhhhHHhhhc-e-eeeEEEeecCCCC
Q 047662 170 MIGWAPQQK-VL-NHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFA--EQFLNEKYICD-I-WKVGLRFDKNESG 239 (301)
Q Consensus 170 v~~~~pq~~-iL-~h~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~-~-~G~G~~l~~~~~~ 239 (301)
+.+|-.+.. ++ +.+++ |+.- =| ..+.+||+++|.|.|+....+ |-..+.....+ . -+.|+.++.
T Consensus 355 ~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~---- 428 (485)
T PRK14099 355 VIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP---- 428 (485)
T ss_pred EeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC----
Confidence 456633322 23 34566 6642 22 347899999997766654422 32222110100 0 047888853
Q ss_pred CCCHHHHHHHHHH---HhCChHHHHHH
Q 047662 240 IITREEIKNKVDQ---VLGHQDFKARA 263 (301)
Q Consensus 240 ~~~~~~l~~av~~---vl~~~~~r~~a 263 (301)
-+.+++.++|.+ ++.|++.+++.
T Consensus 429 -~d~~~La~ai~~a~~l~~d~~~~~~l 454 (485)
T PRK14099 429 -VTADALAAALRKTAALFADPVAWRRL 454 (485)
T ss_pred -CCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 478999999987 56676544443
No 142
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=78.76 E-value=8.8 Score=37.18 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=58.5
Q ss_pred ecccchhh---hccCCCcceEEe---cCCc-hhHHHHHHhCCC----cccCCCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 171 IGWAPQQK---VLNHPSIACFLS---HCGW-NSTMEGVSNGIP----FLCWPYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 171 ~~~~pq~~---iL~h~~v~~fIt---HgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
.+++++.+ ++..+++ ||. +-|+ .+++||+++|+| +|+--..+--.. ...|+.+.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~----- 410 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVN----- 410 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEEC-----
Confidence 35667655 5777887 553 3343 467999999999 544422221110 13466664
Q ss_pred CCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHH
Q 047662 240 IITREEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLEWL 291 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~ 291 (301)
..+.+++.++|.+++.++ +.+++.++..+.+. .-+...-..+++.++
T Consensus 411 p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 PYDIDEVADAIHRALTMPLEERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 247899999999999865 33333333333332 245555555555543
No 143
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=78.61 E-value=3.1 Score=38.75 Aligned_cols=109 Identities=12% Similarity=0.199 Sum_probs=62.7
Q ss_pred CCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhh----hceeeeEEEeecCCCCC
Q 047662 166 ARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYI----CDIWKVGLRFDKNESGI 240 (301)
Q Consensus 166 ~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~----~~~~G~G~~l~~~~~~~ 240 (301)
+++... ...+-.++|..+++ .||-- .+.+.|.++.++|+|....-.|.+.+.+-+ .+ ...|..+
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~-~~pg~~~------- 320 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEE-DLPGPIV------- 320 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTT-SSSS-EE-------
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHh-hCCCcee-------
Confidence 444443 44566789999998 99987 458899999999999877665555332111 11 1333333
Q ss_pred CCHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHhHhhcCCChHHHHHHH
Q 047662 241 ITREEIKNKVDQVLGHQ-DFKARALELKEKAMSSIREGGSSRKTFQNF 287 (301)
Q Consensus 241 ~~~~~l~~av~~vl~~~-~~r~~a~~l~~~~~~~~~~~gss~~~l~~~ 287 (301)
-+.++|.++|+.++.++ .++++.++..+.+-. -. .|.+.+.+.++
T Consensus 321 ~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~-Dg~s~eri~~~ 366 (369)
T PF04464_consen 321 YNFEELIEAIENIIENPDEYKEKREKFRDKFFK-YN-DGNSSERIVNY 366 (369)
T ss_dssp SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST-T---S-HHHHHHHH
T ss_pred CCHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCC-CC-CchHHHHHHHH
Confidence 37899999999988766 456666666666644 23 34444444443
No 144
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=72.84 E-value=7.7 Score=34.51 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=57.1
Q ss_pred CceEEEEecCC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh-cCCce-eecc--cch-hhh
Q 047662 108 SSVLYAAFGSF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV-SARGR-MIGW--APQ-QKV 179 (301)
Q Consensus 108 ~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~-~~~~~-v~~~--~pq-~~i 179 (301)
++.|.+..|+. -.++.+.+.++++.|...++++++..+++ + ...-+.+.+.. ..++. +.+- +.+ ..+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~-e----~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA-E----RELAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh-h----HHHHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 44777777775 34778999999999977788877654432 0 00111111111 11211 2222 222 348
Q ss_pred ccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 180 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 180 L~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
+.++++ ||+.-. +.++=|.+.|+|++++
T Consensus 196 i~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 888888 999854 5666667899999886
No 145
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=69.71 E-value=37 Score=30.54 Aligned_cols=92 Identities=20% Similarity=0.217 Sum_probs=55.1
Q ss_pred eEEEEecCCc--cCCHHHHHHHH----HHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcC-----Ccee-----ecc
Q 047662 110 VLYAAFGSFT--ILDQVQFQELA----FGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSA-----RGRM-----IGW 173 (301)
Q Consensus 110 vvyvs~GS~~--~~~~~~~~~~~----~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~-----~~~v-----~~~ 173 (301)
|.++-.|+.. .+..++...++ +.+++.|.+|+...... -|+.....+.. .+.+ .++
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~ 235 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGY 235 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCC
Confidence 5555566653 35555555444 45577888998887644 22222221111 1111 245
Q ss_pred cchhhhccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 174 APQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 174 ~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
=|..+.|+.++. .++|--..|...||.+.|+|+-+.
T Consensus 236 NPY~~~La~Ady-ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 236 NPYIDMLAAADY-IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CchHHHHhhcce-EEEecchhhhhHHHhccCCCeEEE
Confidence 588888988776 244555678889999999998553
No 146
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=69.58 E-value=15 Score=37.90 Aligned_cols=109 Identities=15% Similarity=0.041 Sum_probs=65.8
Q ss_pred eecccchhh---hccCCCcceEEec---CCc-hhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCC
Q 047662 170 MIGWAPQQK---VLNHPSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIIT 242 (301)
Q Consensus 170 v~~~~pq~~---iL~h~~v~~fItH---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~ 242 (301)
+.+++++.+ +++.+++ |+.- -|. ..++|++++|+|-.+.|+..+-.--+..+ .-|+.+++ .+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECC-----CC
Confidence 335677665 6677777 5543 244 47789999987644444433322222222 23667743 47
Q ss_pred HHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHhc
Q 047662 243 REEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIFF 294 (301)
Q Consensus 243 ~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~~ 294 (301)
.+++.++|.++++.+ +.+++.+++.+.++ ..+...-.+.+++.+.+.
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 899999999999754 45555554444433 346666667777776654
No 147
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=67.24 E-value=33 Score=34.35 Aligned_cols=78 Identities=13% Similarity=0.038 Sum_probs=44.5
Q ss_pred hhccCCCcceEEe-cCC-chhHHHHHHhCCCcccCCCCC-chhhhHHhhhceeeeEEEeecCCCC--CCCHHHHHHHHHH
Q 047662 178 KVLNHPSIACFLS-HCG-WNSTMEGVSNGIPFLCWPYFA-EQFLNEKYICDIWKVGLRFDKNESG--IITREEIKNKVDQ 252 (301)
Q Consensus 178 ~iL~h~~v~~fIt-HgG-~~s~~Eal~~GvP~i~~P~~~-DQ~~Na~~~~~~~G~G~~l~~~~~~--~~~~~~l~~av~~ 252 (301)
+++..+++.+|=| +=| ..+++||+++|+|+|+....+ ....+ ..+.+.-..|+.+...... .-+.+++.+++.+
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~ 548 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYE 548 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHHHH
Confidence 4566677733333 334 448999999999999987643 22222 1221110256666421111 1245778888888
Q ss_pred HhCC
Q 047662 253 VLGH 256 (301)
Q Consensus 253 vl~~ 256 (301)
++..
T Consensus 549 ~~~~ 552 (590)
T cd03793 549 FCQL 552 (590)
T ss_pred HhCC
Confidence 8844
No 148
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=65.39 E-value=90 Score=26.89 Aligned_cols=87 Identities=17% Similarity=0.303 Sum_probs=53.5
Q ss_pred CCceeecccch---hhhccCCCcceEEec---CCch-hHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCC
Q 047662 166 ARGRMIGWAPQ---QKVLNHPSIACFLSH---CGWN-STMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNES 238 (301)
Q Consensus 166 ~~~~v~~~~pq---~~iL~h~~v~~fItH---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~ 238 (301)
+++...+++++ ..++..+++ ++.. .|.+ ++.||+++|+|+|..... .....+.+. +.|..+.
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~-~~g~~~~---- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDG-ETGLLVP---- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCC-CceEecC----
Confidence 45666788882 236666666 5544 2443 369999999999776553 222333232 2466332
Q ss_pred CCCCHHHHHHHHHHHhCChHHHHHHH
Q 047662 239 GIITREEIKNKVDQVLGHQDFKARAL 264 (301)
Q Consensus 239 ~~~~~~~l~~av~~vl~~~~~r~~a~ 264 (301)
....+++..++..++.+.+.++...
T Consensus 326 -~~~~~~~~~~i~~~~~~~~~~~~~~ 350 (381)
T COG0438 326 -PGDVEELADALEQLLEDPELREELG 350 (381)
T ss_pred -CCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 1268999999999998874444433
No 149
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=64.29 E-value=1.3e+02 Score=28.33 Aligned_cols=141 Identities=14% Similarity=0.234 Sum_probs=82.4
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhh---------CCC-CEEEEEcCCCCCCCCCCCCCchhhhhc----CCceee-
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLEL---------CNR-PFLWVVRPDITTDANDRYPDGFQERVS----ARGRMI- 171 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~---------~~~-~~iw~~~~~~~~~~~~~lp~~~~~~~~----~~~~v~- 171 (301)
+++.++||--| ..+.+.+..+++||.. .+. ..+..+.+. .++-+.+.+.+. .++.+.
T Consensus 253 ~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK------GPlkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK------GPLKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred CCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC------CchhHHHHHHHHHhcccceeeee
Confidence 45678886433 3456778888888851 222 344444332 223344443332 344443
Q ss_pred cccc---hhhhccCCCcceEEecCCch-----hHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCH
Q 047662 172 GWAP---QQKVLNHPSIACFLSHCGWN-----STMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITR 243 (301)
Q Consensus 172 ~~~p---q~~iL~h~~v~~fItHgG~~-----s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~ 243 (301)
.|+- ...+|+.+++|+.+|-...| -+..-.-+|+|++.+-+ ..--..|.+. ..|.... +.
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f----kcl~ELVkh~-eNGlvF~-------Ds 392 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF----KCLDELVKHG-ENGLVFE-------DS 392 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc----hhHHHHHhcC-CCceEec-------cH
Confidence 7864 44589999998877765443 35555666777766533 2233344444 6777774 68
Q ss_pred HHHHHHHHHHhCC----h----HHHHHHHHHH
Q 047662 244 EEIKNKVDQVLGH----Q----DFKARALELK 267 (301)
Q Consensus 244 ~~l~~av~~vl~~----~----~~r~~a~~l~ 267 (301)
+++.+.+..++.| . ++++|+++-+
T Consensus 393 ~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 393 EELAEQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 8899999888862 2 4566665543
No 150
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=63.47 E-value=23 Score=32.91 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=55.6
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCC-chhh-hhcCCce---------------ee
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPD-GFQE-RVSARGR---------------MI 171 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~-~~~~-~~~~~~~---------------v~ 171 (301)
.+++.+.||.....+. .++++.|++.++.++|+....... ..-+|+ ++.- .++...+ +.
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 3788888887766553 347777877899999987543110 011121 1110 0110000 00
Q ss_pred cccchhhhccCCCcceEEecCCchh---HHHHHHhCCCcccC
Q 047662 172 GWAPQQKVLNHPSIACFLSHCGWNS---TMEGVSNGIPFLCW 210 (301)
Q Consensus 172 ~~~pq~~iL~h~~v~~fItHgG~~s---~~Eal~~GvP~i~~ 210 (301)
.+.--..++..-+-.++|++||.-| ++.|...|+|.+..
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 1111112455444444999999997 89999999999863
No 151
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=61.83 E-value=19 Score=31.96 Aligned_cols=42 Identities=10% Similarity=0.115 Sum_probs=32.2
Q ss_pred ceeecccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCC
Q 047662 168 GRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 212 (301)
Q Consensus 168 ~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~ 212 (301)
+.+.+-.+-.++|.+++. +||-.+ ..-+||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 334466677789999988 777654 477899999999999753
No 152
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=61.34 E-value=24 Score=32.41 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=59.4
Q ss_pred CCceEEEEecCC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcC-Cce-eecc--cchh-h
Q 047662 107 PSSVLYAAFGSF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSA-RGR-MIGW--APQQ-K 178 (301)
Q Consensus 107 ~~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~-~~~-v~~~--~pq~-~ 178 (301)
.++.|.+..|+. -.++.+.+.++++.|...++++++.-++... ....-+.+.+..+. ++. +.+- +.+. .
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 445777777775 3477899999999997778887655432200 00000111111111 111 2222 2333 3
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
++.++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8888888 9997 677888889999999985
No 153
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=59.49 E-value=6.5 Score=32.73 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=23.3
Q ss_pred cCCCcceEEecCCchhHHHHHHhCCCcccCCCCC
Q 047662 181 NHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFA 214 (301)
Q Consensus 181 ~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~ 214 (301)
.+..+.++|++||...++.... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4566666999999999999887 99999999854
No 154
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.28 E-value=34 Score=31.19 Aligned_cols=96 Identities=8% Similarity=0.047 Sum_probs=57.3
Q ss_pred CCceEEEEecCC----ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCce-eec--ccchh-h
Q 047662 107 PSSVLYAAFGSF----TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGR-MIG--WAPQQ-K 178 (301)
Q Consensus 107 ~~~vvyvs~GS~----~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~--~~pq~-~ 178 (301)
.++.|.+.-|+. -.++.+.+.++++.+...+.+++.. +++.+ ...-+.+.+..+.++. +.+ -+.+. .
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e----~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKD----HPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhh----HHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 456888887763 2478899999999997667776644 43311 0011112112222221 222 22333 3
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888888 8885 456677788999999874
No 155
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=57.16 E-value=1.2e+02 Score=25.80 Aligned_cols=146 Identities=10% Similarity=0.112 Sum_probs=70.6
Q ss_pred CceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhh-cCCceeecccchhhhccCCCcc
Q 047662 108 SSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERV-SARGRMIGWAPQQKVLNHPSIA 186 (301)
Q Consensus 108 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~~~pq~~iL~h~~v~ 186 (301)
+.++.|..|..+ ..-+..|...|..+. ++.+. ..+.+.+-. .+++....--.+...|....+
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~Vt-Vvsp~--------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l- 72 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLR-VIAEE--------LESELTLLAEQGGITWLARCFDADILEGAFL- 72 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEE-EEcCC--------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE-
Confidence 347777666533 233455556777654 44333 111221111 123433321123345666665
Q ss_pred eEEecCCchhHHHH-----HHhCCCc--ccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh--
Q 047662 187 CFLSHCGWNSTMEG-----VSNGIPF--LCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ-- 257 (301)
Q Consensus 187 ~fItHgG~~s~~Ea-----l~~GvP~--i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~-- 257 (301)
+|..-|...+.+. -..|+|+ +.-|-..| +..-..+... ++-+.+..+.....-...|++.|++.+...
T Consensus 73 -Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g-~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~ 149 (205)
T TIGR01470 73 -VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRS-PVVVAISSGGAAPVLARLLRERIETLLPPSLG 149 (205)
T ss_pred -EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcC-CEEEEEECCCCCcHHHHHHHHHHHHhcchhHH
Confidence 7777776644443 3467777 44444333 2232333222 344444432223334466888888887432
Q ss_pred HHHHHHHHHHHHHHhH
Q 047662 258 DFKARALELKEKAMSS 273 (301)
Q Consensus 258 ~~r~~a~~l~~~~~~~ 273 (301)
.+-+.+.+++..+++.
T Consensus 150 ~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 150 DLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4556666666666553
No 156
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=55.54 E-value=24 Score=32.11 Aligned_cols=135 Identities=10% Similarity=-0.024 Sum_probs=71.9
Q ss_pred CceEEEEec-CC--ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeec--ccchh-hhcc
Q 047662 108 SSVLYAAFG-SF--TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIG--WAPQQ-KVLN 181 (301)
Q Consensus 108 ~~vvyvs~G-S~--~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~--~~pq~-~iL~ 181 (301)
++.|.+..| |. -.++.+.+.++++.+...++++++..++..+. ..-+.+.+.. .++.+.+ -+.+. .++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~----~~~~~i~~~~-~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEE----QRAKRLAEGF-PYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH----HHHHHHHccC-CcceecCCCCHHHHHHHHH
Confidence 345544444 43 24788999999999977777766544532110 0001111111 1122222 23333 3888
Q ss_pred CCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEee--cCCCCCCCHHHHHHHHHHHh
Q 047662 182 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFD--KNESGIITREEIKNKVDQVL 254 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~--~~~~~~~~~~~l~~av~~vl 254 (301)
++++ ||+-. .|.++=|.+.|+|+|++=--.+.....-.- . ....+. ......++.+++.++++++|
T Consensus 253 ~a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~-~---~~~~~~~~~~cm~~I~~e~V~~~~~~~l 320 (322)
T PRK10964 253 GAKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYG-K---NQHACRSPGKSMADLSAETVFQKLETLI 320 (322)
T ss_pred hCCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCC-C---CceeecCCCcccccCCHHHHHHHHHHHh
Confidence 8888 88864 567777888999999862111111110000 0 000011 11235689999999998876
No 157
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=54.88 E-value=1.2e+02 Score=25.87 Aligned_cols=142 Identities=11% Similarity=0.104 Sum_probs=68.9
Q ss_pred CceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhc-CCceeecccchhhhccCCCcc
Q 047662 108 SSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVS-ARGRMIGWAPQQKVLNHPSIA 186 (301)
Q Consensus 108 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~-~~~~v~~~~pq~~iL~h~~v~ 186 (301)
+.++.|..|.++ ...+..|...+..+. ++.+. +.+.+.+... +.+.......+..-+..+++
T Consensus 11 k~vLVIGgG~va-------~~ka~~Ll~~ga~V~-VIs~~--------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl- 73 (202)
T PRK06718 11 KRVVIVGGGKVA-------GRRAITLLKYGAHIV-VISPE--------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL- 73 (202)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCeEE-EEcCC--------CCHHHHHHHhCCCEEEEecCCChhhcCCceE-
Confidence 447777666543 234555666676644 44432 1122221111 22333333334455666666
Q ss_pred eEEecCCchhHHHHHH----hCCCcccCCCCCchhhhH-----HhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 187 CFLSHCGWNSTMEGVS----NGIPFLCWPYFAEQFLNE-----KYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 187 ~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~Na-----~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
+|+--+--.+.+.++ .++++-+ .|.+..+ ..+... ++-+.+..++....-...|++.|.+++...
T Consensus 74 -ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~~ie~~~~~~ 147 (202)
T PRK06718 74 -VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRDELEALYDES 147 (202)
T ss_pred -EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHHHHHHHcchh
Confidence 787777666666554 3433222 3443322 222222 344444422223333456777777776322
Q ss_pred --HHHHHHHHHHHHHHh
Q 047662 258 --DFKARALELKEKAMS 272 (301)
Q Consensus 258 --~~r~~a~~l~~~~~~ 272 (301)
.+-+.+.++++.+++
T Consensus 148 ~~~~~~~~~~~R~~~k~ 164 (202)
T PRK06718 148 YESYIDFLYECRQKIKE 164 (202)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 456666666666665
No 158
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=53.84 E-value=40 Score=31.06 Aligned_cols=95 Identities=9% Similarity=0.052 Sum_probs=56.9
Q ss_pred CceEEEEec-CC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecc--cchhh-hc
Q 047662 108 SSVLYAAFG-SF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGW--APQQK-VL 180 (301)
Q Consensus 108 ~~vvyvs~G-S~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~--~pq~~-iL 180 (301)
++.|.+..| |. ..++.+.+.++++.+.+.++.++ ..+++.+ ...-+.+.+..+....+.+- +.|.. ++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vv-l~g~~~e----~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVV-LFGGPDE----EERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEE-EecChHH----HHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 568888888 44 35789999999999988886644 4443311 01111121122222213322 23333 67
Q ss_pred cCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 181 NHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 181 ~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
.++++ ||+- -.|-++=|.+.|+|.|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 78777 7764 456677778889999986
No 159
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=53.62 E-value=26 Score=30.33 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=50.0
Q ss_pred CCceEEEEecCC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCce-eecc--cch-hhh
Q 047662 107 PSSVLYAAFGSF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGR-MIGW--APQ-QKV 179 (301)
Q Consensus 107 ~~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~~--~pq-~~i 179 (301)
+++.|.+..|+. -.++.+.+.++++.|.+.++.++...++... ....-+.+......++. +.+- +.| ..+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ---EKEIADQIAAGLQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH---HHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH---HHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence 445777777775 3468899999999998777666544433200 00000001111111122 2222 223 347
Q ss_pred ccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 180 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 180 L~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
+.++++ ||+. ..+.++=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 888887 8875 456778888999999998
No 160
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=51.80 E-value=32 Score=30.96 Aligned_cols=75 Identities=13% Similarity=0.211 Sum_probs=49.2
Q ss_pred cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHH
Q 047662 120 ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTME 199 (301)
Q Consensus 120 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~E 199 (301)
....+..+++.+++.....+.||.+++.... ..+.++++-..+-.||++ ||=+.-..+++-
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga-----------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~ 105 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYGA-----------------NRLLPYLDYDLIRANPKI--FVGYSDITALHL 105 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCCH-----------------HHhhhhCCHHHHhhCCeE--EEEecHHHHHHH
Confidence 4456788899999999999999999765211 123344444444456665 777777677776
Q ss_pred HHHh--CCCcccCCCC
Q 047662 200 GVSN--GIPFLCWPYF 213 (301)
Q Consensus 200 al~~--GvP~i~~P~~ 213 (301)
+++. |++.+--|+.
T Consensus 106 ~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 106 ALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHhcCceEEECccc
Confidence 6653 6666666653
No 161
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=49.64 E-value=41 Score=30.98 Aligned_cols=96 Identities=8% Similarity=0.015 Sum_probs=57.3
Q ss_pred CCceEEEEecCC----ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcC----Cc-eeecc--cc
Q 047662 107 PSSVLYAAFGSF----TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSA----RG-RMIGW--AP 175 (301)
Q Consensus 107 ~~~vvyvs~GS~----~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~----~~-~v~~~--~p 175 (301)
+++.|.+.-|+. -.++.+.+.++++.|...+++++.. +++.+. ..-+.+.+..+. ++ -+.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~----~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDH----EAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhH----HHHHHHHHhcccccccceeeccCCCCHH
Confidence 456888888873 3478899999999987667776654 433111 011111111111 11 12222 23
Q ss_pred hh-hhccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 176 QQ-KVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 176 q~-~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
+. .+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 33 38888887 8875 466777788899999874
No 162
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=48.48 E-value=58 Score=25.89 Aligned_cols=38 Identities=18% Similarity=0.146 Sum_probs=29.4
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEc
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVR 145 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 145 (301)
...+|+|++||......+.++++++.+. .+.+++++.-
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4469999999997777888999998884 3577777553
No 163
>PLN02470 acetolactate synthase
Probab=47.82 E-value=70 Score=31.98 Aligned_cols=29 Identities=7% Similarity=0.281 Sum_probs=24.1
Q ss_pred CCcceEEecCCc------hhHHHHHHhCCCcccCC
Q 047662 183 PSIACFLSHCGW------NSTMEGVSNGIPFLCWP 211 (301)
Q Consensus 183 ~~v~~fItHgG~------~s~~Eal~~GvP~i~~P 211 (301)
..++++++|.|- +++.+|.+.++|||++.
T Consensus 75 g~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 75 GKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 356668999884 48899999999999985
No 164
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=47.67 E-value=63 Score=29.82 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=58.6
Q ss_pred CCceEEEEecCC---ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhc-CCc-eeecc--cchh-h
Q 047662 107 PSSVLYAAFGSF---TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVS-ARG-RMIGW--APQQ-K 178 (301)
Q Consensus 107 ~~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~-~~~-~v~~~--~pq~-~ 178 (301)
+++.|.+.-|+. -.++.+.+.++++.|...++++++.-++... + ...-+.+.+... .++ -+.+- +.+. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~-e--~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD-D--LACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH-H--HHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 345787888875 3478899999999998778887765443310 0 000011111111 111 12232 2333 3
Q ss_pred hccCCCcceEEecCCchhHHHHHHhCCCcccC
Q 047662 179 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~ 210 (301)
++.++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 259 li~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 259 LIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 8888888 88864 56677778899999875
No 165
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=47.19 E-value=43 Score=27.60 Aligned_cols=36 Identities=17% Similarity=0.033 Sum_probs=26.4
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEc
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVR 145 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 145 (301)
.+|+|+||.......+++..+.+|.+.+.--++.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 699999998766667788888888766643355554
No 166
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=44.96 E-value=16 Score=29.16 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=27.7
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHh-----hCCCCEEEEEcCC
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLE-----LCNRPFLWVVRPD 147 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~-----~~~~~~iw~~~~~ 147 (301)
.||+|+.|+........+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 38999999987666666777766665 2346899999865
No 167
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=43.95 E-value=52 Score=32.23 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=39.9
Q ss_pred hHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHH
Q 047662 196 STMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARAL 264 (301)
Q Consensus 196 s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~ 264 (301)
++.||+++|.|+++.=-.+ =+..+.+. -.|..+++ +.-....+.+++.++..|++++.++.
T Consensus 381 v~IEAMa~glPvvAt~~GG----P~EiV~~~-~tG~l~dp---~~e~~~~~a~~~~kl~~~p~l~~~~~ 441 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNNGG----PAEIVVHG-VTGLLIDP---GQEAVAELADALLKLRRDPELWARMG 441 (495)
T ss_pred eeHHHHhcCCCEEEecCCC----ceEEEEcC-CcceeeCC---chHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 7899999999999873221 22333332 46666652 11122369999999999998765543
No 168
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.26 E-value=90 Score=23.05 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCCh----HHHHHHHHHHHHh
Q 047662 245 EIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSS----RKTFQNFLEWLIF 293 (301)
Q Consensus 245 ~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss----~~~l~~~v~~~~~ 293 (301)
++...++++++|...=+|.++.++.+.++....|.+ ..+.-..++++.+
T Consensus 17 q~~~lL~~Ii~DttVPRNIRraA~~a~e~L~~e~e~p~vRaAtaIsiLeeisn 69 (93)
T COG1698 17 QVMQLLDEIIQDTTVPRNIRRAAEEAKEALNNEGESPAVRAATAISILEEISN 69 (93)
T ss_pred HHHHHHHHHHccccccHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHhc
Confidence 344556677788866666666666666665543333 4555667777654
No 169
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=42.87 E-value=2.9e+02 Score=25.92 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=80.8
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHh---hCCCCEEEEEcCCCCCCCCCCCCCchhhhh--------c-CCcee-ecccch
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLE---LCNRPFLWVVRPDITTDANDRYPDGFQERV--------S-ARGRM-IGWAPQ 176 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~---~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--------~-~~~~v-~~~~pq 176 (301)
-+.|-.|-.+..++.+++.+ +++. ..+.+++.-++-+.. .+.+.+++ + +++.+ .+++|-
T Consensus 185 ~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~-------n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf 256 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGAN-------NQAYIQQVIQAGKELFGAENFQILTEFMPF 256 (360)
T ss_pred ceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCc-------hHHHHHHHHHHHHHhcCccceeEhhhhCCH
Confidence 56677787776666665433 2332 234565554443200 01122111 2 35544 478876
Q ss_pred hh---hccCCCcceEEec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHH
Q 047662 177 QK---VLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVD 251 (301)
Q Consensus 177 ~~---iL~h~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~ 251 (301)
.+ +|+.++++.|.+. =|.|+++-.++.|+|++.- .+..--+.+.+. |+-+... .+.++...|.++=+
T Consensus 257 ~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~-~ipVlf~---~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 257 DEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQ-GIPVLFY---GDELDEALVREAQR 328 (360)
T ss_pred HHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhC-CCeEEec---cccCCHHHHHHHHH
Confidence 54 9999999877764 5899999999999999764 223333445554 7777665 47789998888887
Q ss_pred HHh
Q 047662 252 QVL 254 (301)
Q Consensus 252 ~vl 254 (301)
++.
T Consensus 329 ql~ 331 (360)
T PF07429_consen 329 QLA 331 (360)
T ss_pred HHh
Confidence 776
No 170
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=40.41 E-value=15 Score=19.33 Aligned_cols=19 Identities=21% Similarity=0.807 Sum_probs=14.4
Q ss_pred CcchHHHhhcCCCCceEEE
Q 047662 95 DSSCLEWLDQQQPSSVLYA 113 (301)
Q Consensus 95 ~~~~~~~l~~~~~~~vvyv 113 (301)
+..|.+|.+++.+...+|.
T Consensus 2 eikCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 2 EIKCINWFESRGEERFLYL 20 (22)
T ss_pred ccEEeehhhhCCceeEEEE
Confidence 3468899999887767775
No 171
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=37.24 E-value=65 Score=29.39 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=45.5
Q ss_pred cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHH
Q 047662 120 ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTME 199 (301)
Q Consensus 120 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~E 199 (301)
....+...++.+++.....+.||.+++.... ..+.++++...+-.||++ ||=..-..+++-
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------------~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~ 109 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGDDS-----------------NELLPYLDYELIKKNPKI--FIGYSDITALHL 109 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCcccCH-----------------hhhhhhcCHHHHhhCCCE--EEeccHHHHHHH
Confidence 3356778899999999999999998765211 123344444444455554 666666566665
Q ss_pred HHH--hCCCcccCCCC
Q 047662 200 GVS--NGIPFLCWPYF 213 (301)
Q Consensus 200 al~--~GvP~i~~P~~ 213 (301)
+++ .|++.+.-|+.
T Consensus 110 al~~~~g~~t~hGp~~ 125 (308)
T cd07062 110 AIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHhcCCeEEECccc
Confidence 553 25555555543
No 172
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.24 E-value=59 Score=29.11 Aligned_cols=52 Identities=12% Similarity=0.044 Sum_probs=35.4
Q ss_pred ceEEecCCchhHHHHHH------hCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 186 ACFLSHCGWNSTMEGVS------NGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 186 ~~fItHgG~~s~~Eal~------~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.++|+-||-||++.|+. .++|++++.. - .+|..- .++.+++.+++++++++.
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~-------------G-~lGFL~------~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT-------------G-HLGFYT------DWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC-------------C-Cceecc------cCCHHHHHHHHHHHHcCC
Confidence 34999999999999975 4788877732 0 123222 246777888888887543
No 173
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=37.14 E-value=60 Score=25.38 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=26.8
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHhh--CCCCEEEEEc
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLEL--CNRPFLWVVR 145 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~ 145 (301)
.+|+|+|||...-..+.+..+.+.+++ .++.+-|..-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999866455677788888743 4567777764
No 174
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=36.06 E-value=78 Score=25.90 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=22.2
Q ss_pred cceEEecCCc------hhHHHHHHhCCCcccCC
Q 047662 185 IACFLSHCGW------NSTMEGVSNGIPFLCWP 211 (301)
Q Consensus 185 v~~fItHgG~------~s~~Eal~~GvP~i~~P 211 (301)
.+++++|.|- +++.+|...++|||++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4448888884 48899999999999995
No 175
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=35.66 E-value=66 Score=20.26 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHhCC-hHHHHHHHHH
Q 047662 242 TREEIKNKVDQVLGH-QDFKARALEL 266 (301)
Q Consensus 242 ~~~~l~~av~~vl~~-~~~r~~a~~l 266 (301)
+++++..||..+.++ -++++.|+++
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 468899999999977 4777777664
No 176
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=34.74 E-value=3.7e+02 Score=24.82 Aligned_cols=126 Identities=10% Similarity=0.071 Sum_probs=73.4
Q ss_pred eEEEEecCCccCCHHHHHHHHHHH-hh--CCCCEEEEEcCCCCCCCCCCCCCchhhhh--------c-CCcee-ecccch
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGL-EL--CNRPFLWVVRPDITTDANDRYPDGFQERV--------S-ARGRM-IGWAPQ 176 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al-~~--~~~~~iw~~~~~~~~~~~~~lp~~~~~~~--------~-~~~~v-~~~~pq 176 (301)
-+-|-.|-.+..++.+++ +++++ +. .+.+++.-++-+.. .+.+.+++ + +++.+ .+++|.
T Consensus 146 ~~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~g-------n~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f 217 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPAN-------NQAYIEEVRQAGLALFGAENFQILTEKLPF 217 (322)
T ss_pred ceEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCCC-------CHHHHHHHHHHHHHhcCcccEEehhhhCCH
Confidence 355666777666666654 33333 33 34466655543200 01111111 2 45554 477775
Q ss_pred h---hhccCCCcceEEec--CCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHH
Q 047662 177 Q---KVLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVD 251 (301)
Q Consensus 177 ~---~iL~h~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~ 251 (301)
. .+|+.++++.|+++ =|.|+++-.++.|+|++.--- -+.... +.+. |+-+..+ .+.++...+.++=+
T Consensus 218 ~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fwqd-l~e~-gv~Vlf~---~d~L~~~~v~e~~r 289 (322)
T PRK02797 218 DDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFWQD-LTEQ-GLPVLFT---GDDLDEDIVREAQR 289 (322)
T ss_pred HHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchHHH-HHhC-CCeEEec---CCcccHHHHHHHHH
Confidence 5 49999999888876 479999999999999987532 122222 3343 7777555 35667666665533
No 177
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=33.69 E-value=71 Score=30.17 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCC-CCCC-----CchhhhhcCCce--eecccchhh---hccCCCcceEE
Q 047662 121 LDQVQFQELAFGLELCNRPFLWVVRPDITTDAN-DRYP-----DGFQERVSARGR--MIGWAPQQK---VLNHPSIACFL 189 (301)
Q Consensus 121 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~-~~lp-----~~~~~~~~~~~~--v~~~~pq~~---iL~h~~v~~fI 189 (301)
.....+..++++++..+.++...+......... .-+. .+- ....+++. +.+|+||.+ +|-.+++ =+
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--Nf 268 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF--NF 268 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--ce
Confidence 355668899999998888887777543111100 0011 000 00124443 459999986 8888887 33
Q ss_pred ecCCchhHHHHHHhCCCcccC
Q 047662 190 SHCGWNSTMEGVSNGIPFLCW 210 (301)
Q Consensus 190 tHgG~~s~~Eal~~GvP~i~~ 210 (301)
-+ |-=|+.-|..+|+|+|=-
T Consensus 269 VR-GEDSfVRAqwAgkPFvWh 288 (374)
T PF10093_consen 269 VR-GEDSFVRAQWAGKPFVWH 288 (374)
T ss_pred Ee-cchHHHHHHHhCCCceEe
Confidence 33 678999999999999743
No 178
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.67 E-value=1.5e+02 Score=24.66 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=55.6
Q ss_pred chhh-hccCCCcceEEecCC---chhHHHHHHhCCCcccCCCCC--chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHH
Q 047662 175 PQQK-VLNHPSIACFLSHCG---WNSTMEGVSNGIPFLCWPYFA--EQFLNEKYICDIWKVGLRFDKNESGIITREEIKN 248 (301)
Q Consensus 175 pq~~-iL~h~~v~~fItHgG---~~s~~Eal~~GvP~i~~P~~~--DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~ 248 (301)
.|.. |-.||++.+-+--.| .-|..|--.+|.=-+. |.-. =+..|+.+.++ +|.=..+.. +..++++|.+
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~~r-FgfPfI~aV---kg~~k~~Il~ 138 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLS-PEEFARFTELNAAYVER-FGFPFIIAV---KGNTKDTILA 138 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCC-HHHHHHHHHHHHHHHHh-cCCceEEee---cCCCHHHHHH
Confidence 4444 345777732222222 3466666666654321 1100 14679999976 698877764 5568999999
Q ss_pred HHHHHhCCh---HHHHHHHHHHHHHH
Q 047662 249 KVDQVLGHQ---DFKARALELKEKAM 271 (301)
Q Consensus 249 av~~vl~~~---~~r~~a~~l~~~~~ 271 (301)
+.++-+.|. +++..+.++.++++
T Consensus 139 a~~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 139 AFERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 998888776 56666665555544
No 179
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=33.65 E-value=54 Score=29.31 Aligned_cols=39 Identities=8% Similarity=0.074 Sum_probs=23.8
Q ss_pred ceEEEEecCCccCC-HHHHHHHHHHHhh--CCCCEEEEEcCC
Q 047662 109 SVLYAAFGSFTILD-QVQFQELAFGLEL--CNRPFLWVVRPD 147 (301)
Q Consensus 109 ~vvyvs~GS~~~~~-~~~~~~~~~al~~--~~~~~iw~~~~~ 147 (301)
.+|+|||||...-. ...+..+.+.+++ .++.+.|+..+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 38999999985443 3367777777743 688999998644
No 180
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.61 E-value=1.9e+02 Score=26.52 Aligned_cols=84 Identities=19% Similarity=0.227 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCCCCCC---CCCCCCCchhhhh--cCC--ceeecccchhh---hccCCCcceEEec
Q 047662 122 DQVQFQELAFGLELCNRPFLWVVRPDITTD---ANDRYPDGFQERV--SAR--GRMIGWAPQQK---VLNHPSIACFLSH 191 (301)
Q Consensus 122 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~---~~~~lp~~~~~~~--~~~--~~v~~~~pq~~---iL~h~~v~~fItH 191 (301)
.+..+...++-+++.+.+++..+.+..... +....+.+....+ .+. +...+|+||.+ +|--+++- +-
T Consensus 187 ~npa~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~n--~V- 263 (370)
T COG4394 187 ENPALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDFN--LV- 263 (370)
T ss_pred CCcchHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhcccc--ee-
Confidence 344566677777778888777664431100 0000111111000 122 33459999986 78777762 22
Q ss_pred CCchhHHHHHHhCCCcc
Q 047662 192 CGWNSTMEGVSNGIPFL 208 (301)
Q Consensus 192 gG~~s~~Eal~~GvP~i 208 (301)
=|--|+.-|..+|.|.+
T Consensus 264 RGEDSFVRAq~agkPfl 280 (370)
T COG4394 264 RGEDSFVRAQLAGKPFL 280 (370)
T ss_pred ecchHHHHHHHcCCCcE
Confidence 36789999999999986
No 181
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=32.68 E-value=1.2e+02 Score=24.62 Aligned_cols=28 Identities=11% Similarity=0.240 Sum_probs=21.7
Q ss_pred cceEEecCC------chhHHHHHHhCCCcccCCC
Q 047662 185 IACFLSHCG------WNSTMEGVSNGIPFLCWPY 212 (301)
Q Consensus 185 v~~fItHgG------~~s~~Eal~~GvP~i~~P~ 212 (301)
.+++++|.| .+++.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 444777777 4478899999999999953
No 182
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.20 E-value=88 Score=28.35 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=36.3
Q ss_pred CCCcceEEecCCchhHHHHHH----hCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+-||-||++.+.. .++|++++-.. .+|.. ..++.+++.+++++++.++
T Consensus 64 ~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL------t~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 64 ISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL------TDITVDEAEKFFQAFFQGE 121 (287)
T ss_pred CCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC------CcCCHHHHHHHHHHHHcCC
Confidence 4555 999999999998755 36777766220 12322 2356788888888888654
No 183
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=30.38 E-value=5.7e+02 Score=25.64 Aligned_cols=145 Identities=13% Similarity=0.143 Sum_probs=71.9
Q ss_pred ceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceE
Q 047662 109 SVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACF 188 (301)
Q Consensus 109 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~f 188 (301)
+.|-|-+||.+ +...+++....|+..|.++-..+-+. +..|+.+. .|+-+.. ...+++|
T Consensus 411 ~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa------hr~~~~~~----------~~~~~~~---~~~~~v~ 469 (577)
T PLN02948 411 PLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA------HRTPERMF----------SYARSAH---SRGLQVI 469 (577)
T ss_pred CeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC------ccCHHHHH----------HHHHHHH---HCCCCEE
Confidence 34555566633 44556666666666666554443322 23333321 1111111 1223458
Q ss_pred EecCCchhHHHHHHh---CCCcccCCCCCch--hhhHH-hhhcee--eeEEEeecCCCCCCCHHHHHHHHHHHhCChHHH
Q 047662 189 LSHCGWNSTMEGVSN---GIPFLCWPYFAEQ--FLNEK-YICDIW--KVGLRFDKNESGIITREEIKNKVDQVLGHQDFK 260 (301)
Q Consensus 189 ItHgG~~s~~Eal~~---GvP~i~~P~~~DQ--~~Na~-~~~~~~--G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r 260 (301)
|.=.|.-.-+-.+.+ -+|+|++|.-..- -.++. -+.. + |+.+..-.- ++..+..-+...|- -+.|++++
T Consensus 470 i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~-~p~g~pv~~v~i-~~~~~aa~~a~~i~-~~~~~~~~ 546 (577)
T PLN02948 470 IAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQ-MPRGVPVATVAI-GNATNAGLLAVRML-GASDPDLL 546 (577)
T ss_pred EEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhc-CCCCCeEEEEec-CChHHHHHHHHHHH-hcCCHHHH
Confidence 888886544443333 5799999995321 11221 1111 3 533222100 12234444443332 23578899
Q ss_pred HHHHHHHHHHHhHhhcC
Q 047662 261 ARALELKEKAMSSIREG 277 (301)
Q Consensus 261 ~~a~~l~~~~~~~~~~~ 277 (301)
++.+.+++.+++.+.+.
T Consensus 547 ~~~~~~~~~~~~~~~~~ 563 (577)
T PLN02948 547 DKMEAYQEDMRDMVLEK 563 (577)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999888888765443
No 184
>PLN02929 NADH kinase
Probab=29.37 E-value=69 Score=29.28 Aligned_cols=63 Identities=19% Similarity=0.185 Sum_probs=41.6
Q ss_pred eEEecCCchhHHHHHH---hCCCcccCCCCC------chhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 187 CFLSHCGWNSTMEGVS---NGIPFLCWPYFA------EQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 187 ~fItHgG~~s~~Eal~---~GvP~i~~P~~~------DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
++|+-||-||++.|.. .++|++++-... .+++|..-... -.|.... ++.+++.++|++++.+.
T Consensus 67 lvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r--~lGfL~~------~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 67 LVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDARR--STGHLCA------ATAEDFEQVLDDVLFGR 138 (301)
T ss_pred EEEEECCcHHHHHHHHHcCCCCcEEEEECCCccccccccccccccccc--Ccccccc------CCHHHHHHHHHHHHcCC
Confidence 4999999999999854 468888875531 23333321111 2554443 56889999999999764
No 185
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=29.09 E-value=5.6e+02 Score=25.15 Aligned_cols=106 Identities=12% Similarity=0.049 Sum_probs=64.2
Q ss_pred eeecccchhh---hccCCCcceEEe--cCCchhH-HHHHHhCC----CcccCCCCCchhhhHHhhhceeeeEEEeecCCC
Q 047662 169 RMIGWAPQQK---VLNHPSIACFLS--HCGWNST-MEGVSNGI----PFLCWPYFAEQFLNEKYICDIWKVGLRFDKNES 238 (301)
Q Consensus 169 ~v~~~~pq~~---iL~h~~v~~fIt--HgG~~s~-~Eal~~Gv----P~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~ 238 (301)
++.+.+|..+ ++..+++ ++|| .-|+|-+ .|.++++. |+|.--+ .-|. +.+.-++.++
T Consensus 365 ~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSef-----aGaa---~~l~~AllVN---- 431 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEF-----AGAA---VELKGALLTN---- 431 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecc-----ccch---hhcCCCEEEC----
Confidence 3446677665 5666666 2333 3488855 49999877 3333322 2222 1134467774
Q ss_pred CCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 239 GIITREEIKNKVDQVLGHQ--DFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 239 ~~~~~~~l~~av~~vl~~~--~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
..+.+++.++|.+.|+.+ +-++|.+++.+.++. ..+..=.+.+++++..
T Consensus 432 -P~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 432 -PYDPVRMDETIYVALAMPKAEQQARMREMFDAVNY-----YDVQRWADEFLAAVSP 482 (487)
T ss_pred -CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhhh
Confidence 468999999999999876 556666666666554 3444445566666543
No 186
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=28.47 E-value=1e+02 Score=27.91 Aligned_cols=54 Identities=11% Similarity=0.217 Sum_probs=36.4
Q ss_pred CCCcceEEecCCchhHHHHHHh----CCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVSN----GIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+-||-|++++++.. ++|++++-+ - .+|... .++.+++.+++.++++++
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~------------G--~lGFL~------~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH------------G--RLGFIT------DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC------------C--Cccccc------cCCHHHHHHHHHHHHcCC
Confidence 3455 9999999999999763 567766632 0 133322 256788888888887543
No 187
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=28.27 E-value=2.5e+02 Score=27.86 Aligned_cols=28 Identities=7% Similarity=0.307 Sum_probs=22.6
Q ss_pred CcceEEecCCch------hHHHHHHhCCCcccCC
Q 047662 184 SIACFLSHCGWN------STMEGVSNGIPFLCWP 211 (301)
Q Consensus 184 ~v~~fItHgG~~------s~~Eal~~GvP~i~~P 211 (301)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 344588998855 7889999999999984
No 188
>PF14165 YtzH: YtzH-like protein
Probab=27.45 E-value=1.8e+02 Score=21.37 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcC
Q 047662 242 TREEIKNKVDQVLGHQDFKARALELKEKAMSSIREG 277 (301)
Q Consensus 242 ~~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~ 277 (301)
..+.|++.|+.+|.|+.+-..++.+-....+.-+.|
T Consensus 27 EcEQieRLvksLm~n~~i~~~ik~~L~~Iy~ysq~G 62 (87)
T PF14165_consen 27 ECEQIERLVKSLMANPNIDADIKQTLEEIYSYSQNG 62 (87)
T ss_pred HHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHccC
Confidence 357899999999998866666655555555443333
No 189
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=26.16 E-value=3.7e+02 Score=22.06 Aligned_cols=139 Identities=14% Similarity=0.141 Sum_probs=70.6
Q ss_pred EEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecC
Q 047662 113 AAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHC 192 (301)
Q Consensus 113 vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHg 192 (301)
|-+||.+ +.+..++....|+..+.++=..+-+. +..|+.+. .|+.+. ....+++||.=+
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~V~Sa------HRtp~~~~----------~~~~~a---~~~g~~viIa~A 61 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELRVVSA------HRTPELML----------EYAKEA---EERGIKVIIAGA 61 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEEEECc------ccCHHHHH----------HHHHHH---HHCCCeEEEEeC
Confidence 4456643 55677888888888887754444322 33444432 111111 111234488888
Q ss_pred CchhHHHHHH---hCCCcccCCCCCc--hhhhHH--hhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCChHHHHHHHH
Q 047662 193 GWNSTMEGVS---NGIPFLCWPYFAE--QFLNEK--YICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQDFKARALE 265 (301)
Q Consensus 193 G~~s~~Eal~---~GvP~i~~P~~~D--Q~~Na~--~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~~~r~~a~~ 265 (301)
|...-+-.+. .-+|+|++|.... .-.++. .++---|+.+..-.- ++..+..-+...|- -+.|++++++.+.
T Consensus 62 G~aa~Lpgvva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~gvpvatv~I-~~~~nAa~~AaqIl-~~~d~~l~~kl~~ 139 (156)
T TIGR01162 62 GGAAHLPGMVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPSGVPVATVAI-GNAGNAALLAAQIL-GIKDPELAEKLKE 139 (156)
T ss_pred CccchhHHHHHhccCCCEEEecCCccCCCCHHHHHHHhcCCCCCeeEEEEc-CChhHHHHHHHHHH-cCCCHHHHHHHHH
Confidence 8654444333 3589999998432 111111 111001432222100 12234444444442 2368889999888
Q ss_pred HHHHHHhHh
Q 047662 266 LKEKAMSSI 274 (301)
Q Consensus 266 l~~~~~~~~ 274 (301)
+++...+.+
T Consensus 140 ~r~~~~~~v 148 (156)
T TIGR01162 140 YRENQKEEV 148 (156)
T ss_pred HHHHHHHHH
Confidence 888877654
No 190
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.57 E-value=3.7e+02 Score=24.39 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=35.8
Q ss_pred eEEecCCchhHHHHHHh----CCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 187 CFLSHCGWNSTMEGVSN----GIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 187 ~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+|+=||-||++++... ++|++++... .+|.. ..++.+++.++|.++++++
T Consensus 65 ~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl------~~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 65 LVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL------TDIRPDELEFKLAEVLDGH 119 (295)
T ss_pred EEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc------ccCCHHHHHHHHHHHHcCC
Confidence 49999999999998653 5677766431 12322 2357889999999998654
No 191
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=25.43 E-value=1.9e+02 Score=27.11 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=18.0
Q ss_pred HHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHH
Q 047662 99 LEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGL 133 (301)
Q Consensus 99 ~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al 133 (301)
.+.-.+++++.|||++-|--++. +.....+.+|-
T Consensus 122 l~iA~~nP~k~vVF~avGFETTa-P~~A~~i~~A~ 155 (364)
T PRK15062 122 LKIARENPDKEVVFFAIGFETTA-PATAATLLQAK 155 (364)
T ss_pred HHHHHHCCCCeEEEEecCchhcc-HHHHHHHHHHH
Confidence 34445566677888877754432 33333344444
No 192
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=25.32 E-value=1.7e+02 Score=24.13 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=19.3
Q ss_pred CCceEEEEecCCccCCHHHHHHHHHHHhh
Q 047662 107 PSSVLYAAFGSFTILDQVQFQELAFGLEL 135 (301)
Q Consensus 107 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 135 (301)
.+-.+|+++||...-..+.+...+..|..
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~ 34 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAA 34 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHh
Confidence 34479999999764445556666666654
No 193
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=25.04 E-value=58 Score=32.74 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=48.1
Q ss_pred hhhhccCCCcceEEecCC-ch-hHHHHHHhCCCcccCCCCC-chhhhHH--hhhceeeeEEEeecCCCCCCCHHHHHHHH
Q 047662 176 QQKVLNHPSIACFLSHCG-WN-STMEGVSNGIPFLCWPYFA-EQFLNEK--YICDIWKVGLRFDKNESGIITREEIKNKV 250 (301)
Q Consensus 176 q~~iL~h~~v~~fItHgG-~~-s~~Eal~~GvP~i~~P~~~-DQ~~Na~--~~~~~~G~G~~l~~~~~~~~~~~~l~~av 250 (301)
..+++.-+++++|-|-== || |-+||+++|||.|.-=+.+ -++.+-. .-.. .|+-|+-. ..-+.++..+.+
T Consensus 463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR----~~~n~~e~v~~l 537 (633)
T PF05693_consen 463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDR----RDKNYDESVNQL 537 (633)
T ss_dssp HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-S----SSS-HHHHHHHH
T ss_pred HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeC----CCCCHHHHHHHH
Confidence 334566667766655211 33 7899999999999987742 2222211 1123 36665553 445777777777
Q ss_pred HHHhCC-----h----HHHHHHHHHHHHH
Q 047662 251 DQVLGH-----Q----DFKARALELKEKA 270 (301)
Q Consensus 251 ~~vl~~-----~----~~r~~a~~l~~~~ 270 (301)
.+.|.+ . ..|.++.+|++.+
T Consensus 538 a~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 538 ADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 666632 1 4677777777653
No 194
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=24.99 E-value=3.9e+02 Score=21.96 Aligned_cols=143 Identities=14% Similarity=0.182 Sum_probs=77.1
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEE
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFL 189 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fI 189 (301)
.|-|-+||.+ +-+.+++-++.|++.++++-..+-+. +..|+.+.+ |+-. .....+++||
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSA------HRTPe~m~~----------ya~~---a~~~g~~viI 62 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSA------HRTPEKMFE----------YAEE---AEERGVKVII 62 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEec------cCCHHHHHH----------HHHH---HHHCCCeEEE
Confidence 4667789854 56778888888888888765544322 234443221 1111 1234555677
Q ss_pred ecCCch----hHHHHHHhCCCcccCCCCCchhh---hHHhhhceeeeEEEeecCC-CCCCCHHHHHHHHHHHhCChHHHH
Q 047662 190 SHCGWN----STMEGVSNGIPFLCWPYFAEQFL---NEKYICDIWKVGLRFDKNE-SGIITREEIKNKVDQVLGHQDFKA 261 (301)
Q Consensus 190 tHgG~~----s~~Eal~~GvP~i~~P~~~DQ~~---Na~~~~~~~G~G~~l~~~~-~~~~~~~~l~~av~~vl~~~~~r~ 261 (301)
.-.|.- ++..|. .-+|+|++|....-.. -...++. +-.|+-+..-. .+-.|..-+...|- -+.|+++++
T Consensus 63 AgAGgAAHLPGmvAa~-T~lPViGVPv~s~~L~GlDSL~SiVQ-MP~GvPVaTvaIg~a~NAallAa~IL-a~~d~~l~~ 139 (162)
T COG0041 63 AGAGGAAHLPGMVAAK-TPLPVIGVPVQSKALSGLDSLLSIVQ-MPAGVPVATVAIGNAANAALLAAQIL-AIKDPELAE 139 (162)
T ss_pred ecCcchhhcchhhhhc-CCCCeEeccCccccccchHHHHHHhc-CCCCCeeEEEeecchhhHHHHHHHHH-cCCCHHHHH
Confidence 766632 333333 3789999998632111 1111111 23333221100 11234444444443 236889999
Q ss_pred HHHHHHHHHHhHhhc
Q 047662 262 RALELKEKAMSSIRE 276 (301)
Q Consensus 262 ~a~~l~~~~~~~~~~ 276 (301)
+..++++..++.+.+
T Consensus 140 kl~~~r~~~~~~V~~ 154 (162)
T COG0041 140 KLAEFREAQTEEVLE 154 (162)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998876543
No 195
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.98 E-value=1.1e+02 Score=27.88 Aligned_cols=53 Identities=21% Similarity=0.278 Sum_probs=37.1
Q ss_pred cceEEecCCchhHHHHHHh----CCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 185 IACFLSHCGWNSTMEGVSN----GIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 185 v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
+.++|+=||-||++.+... ++|++++-+ - .+|..- .++.+++.+++++++++.
T Consensus 69 ~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~-------------G-~lGFLt------~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 69 MKFAIVLGGDGTVLSAARQLAPCGIPLLTINT-------------G-HLGFLT------EAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred cCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeC-------------C-CCcccc------cCCHHHHHHHHHHHHcCC
Confidence 3449999999999999764 778877732 0 123222 356788899999888654
No 196
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=24.71 E-value=5e+02 Score=23.07 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=33.7
Q ss_pred hhcCCCC-ceEEEEecCCccCCHHHHHHHHHHH-hhCCCCEEEEEcCC
Q 047662 102 LDQQQPS-SVLYAAFGSFTILDQVQFQELAFGL-ELCNRPFLWVVRPD 147 (301)
Q Consensus 102 l~~~~~~-~vvyvs~GS~~~~~~~~~~~~~~al-~~~~~~~iw~~~~~ 147 (301)
||.+.+| .+-...+||...+.++.+......+ +.-+..|+..++++
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN 70 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPN 70 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCC
Confidence 4444333 3666778999899999888766655 66788999999877
No 197
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=24.63 E-value=54 Score=26.94 Aligned_cols=27 Identities=19% Similarity=0.364 Sum_probs=21.8
Q ss_pred cceEEecCCc------hhHHHHHHhCCCcccCC
Q 047662 185 IACFLSHCGW------NSTMEGVSNGIPFLCWP 211 (301)
Q Consensus 185 v~~fItHgG~------~s~~Eal~~GvP~i~~P 211 (301)
.+++++|+|- +++.||...++|||++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3448888884 47889999999999994
No 198
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=24.24 E-value=82 Score=28.38 Aligned_cols=74 Identities=14% Similarity=0.266 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCCchhHHHH
Q 047662 121 LDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCGWNSTMEG 200 (301)
Q Consensus 121 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG~~s~~Ea 200 (301)
...+...++.+++.....+.||.+++.. +-..+.++++...+-.||+. ||-..-..+++-+
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGGy-----------------g~~rlL~~ld~~~i~~~pK~--~iGySDiTaL~~a 106 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGGY-----------------GANRLLPYLDYDAIRKNPKI--FIGYSDITALHNA 106 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--SS------------------GGGGGGGCHHHHHHHSG-E--EEE-GGGHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeeccc-----------------cHHHHHhcccccccccCCCE--EEEecchHHHHHH
Confidence 4557788999999999999999987651 11245566666667777776 8877777777777
Q ss_pred HHh--CCCcccCCCC
Q 047662 201 VSN--GIPFLCWPYF 213 (301)
Q Consensus 201 l~~--GvP~i~~P~~ 213 (301)
++. |.+.+--|+.
T Consensus 107 l~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 107 LYAKTGLVTFHGPML 121 (284)
T ss_dssp HHHHHTBEEEES--H
T ss_pred HHHhCCCeEEEcchh
Confidence 654 6666666653
No 199
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.81 E-value=2e+02 Score=26.24 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=38.3
Q ss_pred CCCcceEEecCCchhHHHHHH----hCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+=||-||++.|.. .++|++++-.. .+|... .++.+++.+++++++.+.
T Consensus 68 ~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 68 YCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT------QIPREYMTDKLLPVLEGK 125 (296)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee------ccCHHHHHHHHHHHHcCC
Confidence 4555 999999999999864 37788877320 133333 257888999999988654
No 200
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.77 E-value=1.3e+02 Score=27.25 Aligned_cols=54 Identities=20% Similarity=0.367 Sum_probs=37.6
Q ss_pred CCCcceEEecCCchhHHHHHHh----CCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVSN----GIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+=||-||++.+... ++|++++-+. .+|.. ..++.+++.+++++++.+.
T Consensus 64 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL------t~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 64 SADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL------ATVSKEEIEETIDELLNGD 121 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc------cccCHHHHHHHHHHHHcCC
Confidence 4455 9999999999998763 6787776321 12322 2356788899999888654
No 201
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=23.53 E-value=3.2e+02 Score=22.26 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=49.8
Q ss_pred hHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecc-cch
Q 047662 98 CLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGW-APQ 176 (301)
Q Consensus 98 ~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~-~pq 176 (301)
+-+||.++. ...|+.|.. -.+....++..+.+-.++=++..... ....+ .+.....++ .+-
T Consensus 23 lg~~La~~g---~~lv~Gg~~-----GlM~a~a~ga~~~gg~viGVlp~~l~------~~~~~----~~~~i~~~~~~~R 84 (159)
T TIGR00725 23 LGKELAKKG---HILINGGRT-----GVMEAVSKGAREAGGLVVGILPDEDF------AGNPY----LTIKVKTGMNFAR 84 (159)
T ss_pred HHHHHHHCC---CEEEcCCch-----hHHHHHHHHHHHCCCeEEEECChhhc------cCCCC----ceEEEECCCcchH
Confidence 445665543 466664432 23455666665556565555432210 00000 011112233 344
Q ss_pred hhhccCCCcceEEecCCchhHHH---HHHhCCCcccCCC
Q 047662 177 QKVLNHPSIACFLSHCGWNSTME---GVSNGIPFLCWPY 212 (301)
Q Consensus 177 ~~iL~h~~v~~fItHgG~~s~~E---al~~GvP~i~~P~ 212 (301)
..++...+-..++--||.||+.| ++.+++|++.++.
T Consensus 85 k~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 85 NFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44444333345666788887655 5889999998875
No 202
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=23.52 E-value=1.3e+02 Score=25.42 Aligned_cols=60 Identities=10% Similarity=0.040 Sum_probs=35.9
Q ss_pred ccCCCCCchhhhHHhhhceeeeEEEeec---------CCCCCCCHHHHH----HHHHHHhCChHHHHHHHHHH
Q 047662 208 LCWPYFAEQFLNEKYICDIWKVGLRFDK---------NESGIITREEIK----NKVDQVLGHQDFKARALELK 267 (301)
Q Consensus 208 i~~P~~~DQ~~Na~~~~~~~G~G~~l~~---------~~~~~~~~~~l~----~av~~vl~~~~~r~~a~~l~ 267 (301)
-+.|...||......+-+.+.+|+.... ..-..+..+.|. +.|.++|.|+.+-+|-+++.
T Consensus 21 WG~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~~IIRnr~KI~ 93 (187)
T PRK10353 21 WGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQ 93 (187)
T ss_pred CCCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCchhHHhHHHHH
Confidence 3577788998887766555677765421 001235555553 66788888885544434433
No 203
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.39 E-value=1e+02 Score=27.65 Aligned_cols=56 Identities=11% Similarity=0.130 Sum_probs=36.6
Q ss_pred hhccCCCcceEEecCCchhHHHHHH----hCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHH
Q 047662 178 KVLNHPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQV 253 (301)
Q Consensus 178 ~iL~h~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~v 253 (301)
.+...+++ +|+=||-||++.+.. .++|++++-.. .+|... .++.+++.+++.++
T Consensus 38 ~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G--------------~lGFL~------~~~~~~~~~~l~~~ 95 (272)
T PRK02231 38 EIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRG--------------NLGFLT------DIDPKNAYEQLEAC 95 (272)
T ss_pred HhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------CCcccc------cCCHHHHHHHHHHH
Confidence 34444555 999999999998754 36787776320 133333 24677788888877
Q ss_pred hC
Q 047662 254 LG 255 (301)
Q Consensus 254 l~ 255 (301)
+.
T Consensus 96 ~~ 97 (272)
T PRK02231 96 LE 97 (272)
T ss_pred Hh
Confidence 76
No 204
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=23.28 E-value=1.5e+02 Score=28.77 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=56.8
Q ss_pred hccCCCcceEEecCCch--------------hHHHHHHhCCCcccC-----CCCCchhhhHHhhhceeeeEEEeecCCCC
Q 047662 179 VLNHPSIACFLSHCGWN--------------STMEGVSNGIPFLCW-----PYFAEQFLNEKYICDIWKVGLRFDKNESG 239 (301)
Q Consensus 179 iL~h~~v~~fItHgG~~--------------s~~Eal~~GvP~i~~-----P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~ 239 (301)
|-.|+.+|++||--|.- .+.|.-.-|+|.|++ |...+-..-+..++++.++-+..-. -.
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvn--c~ 218 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVN--CE 218 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEee--hH
Confidence 56699999999998843 677888899999985 6655655667777766677665421 25
Q ss_pred CCCHHHHHHHHHHHhC
Q 047662 240 IITREEIKNKVDQVLG 255 (301)
Q Consensus 240 ~~~~~~l~~av~~vl~ 255 (301)
.++.++|...++++|.
T Consensus 219 ~l~~~DI~~Il~~vLy 234 (492)
T PF09547_consen 219 QLREEDITRILEEVLY 234 (492)
T ss_pred HcCHHHHHHHHHHHHh
Confidence 6899999999999984
No 205
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=23.23 E-value=3.3e+02 Score=24.18 Aligned_cols=61 Identities=23% Similarity=0.283 Sum_probs=44.1
Q ss_pred hhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhC-------ChHHHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 222 YICDIWKVGLRFDKNESGIITREEIKNKVDQVLG-------HQDFKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 222 ~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~-------~~~~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
.+++++|+-+.. ...+.++-.+.|+..+. .++++++|.+++.. .||.|-+.+..|++++..
T Consensus 180 SLsDRFGL~l~F-----~~~~q~~YL~IV~~~~~~~g~~~~~e~l~~~Al~wa~~------rg~RSGRtA~QF~~~l~g 247 (249)
T PF05673_consen 180 SLSDRFGLWLSF-----YPPDQEEYLAIVRHYAERYGLELDEEELRQEALQWALR------RGGRSGRTARQFIDDLAG 247 (249)
T ss_pred hHHHhCCcEEEe-----cCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHhc
Confidence 345654555444 45788888888877762 24788888888765 688999999999998864
No 206
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=22.78 E-value=2.8e+02 Score=24.81 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=47.6
Q ss_pred eEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEE
Q 047662 110 VLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFL 189 (301)
Q Consensus 110 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fI 189 (301)
|+++.+|+.. -....+...|...|.++...-+.. . .+ -+...+...++-.+|
T Consensus 133 I~~~G~g~S~----~vA~~~~~~l~~ig~~~~~~~d~~-----------~------------~~-~~~~~~~~~Dv~i~i 184 (281)
T COG1737 133 IYFFGLGSSG----LVASDLAYKLMRIGLNVVALSDTH-----------G------------QL-MQLALLTPGDVVIAI 184 (281)
T ss_pred EEEEEechhH----HHHHHHHHHHHHcCCceeEecchH-----------H------------HH-HHHHhCCCCCEEEEE
Confidence 6666666632 234455666666676655433211 0 11 255567777888899
Q ss_pred ecCCch-----hHHHHHHhCCCcccCCCCCc
Q 047662 190 SHCGWN-----STMEGVSNGIPFLCWPYFAE 215 (301)
Q Consensus 190 tHgG~~-----s~~Eal~~GvP~i~~P~~~D 215 (301)
+|.|.. .+..|-..|+|+|.+=-..+
T Consensus 185 S~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~ 215 (281)
T COG1737 185 SFSGYTREIVEAAELAKERGAKVIAITDSAD 215 (281)
T ss_pred eCCCCcHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 999965 44556778999999854433
No 207
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.69 E-value=1.6e+02 Score=27.03 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=38.2
Q ss_pred CCCcceEEecCCchhHHHHHHh----CCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVSN----GIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+=||-||++.|... ++|++++.+. .+|... .+..+++.+++++++.+.
T Consensus 72 ~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 72 GCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA------EAEAEDLDEAVERVVDRD 129 (306)
T ss_pred CCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec------cCCHHHHHHHHHHHHcCC
Confidence 3455 9999999999998653 7788877431 233333 246788888998888654
No 208
>PRK04330 hypothetical protein; Provisional
Probab=22.55 E-value=3e+02 Score=20.26 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=25.1
Q ss_pred HHHHHHHhCChH----HHHHHHHHHHHHHhHhhcCCChHHHHHHHHHHHHh
Q 047662 247 KNKVDQVLGHQD----FKARALELKEKAMSSIREGGSSRKTFQNFLEWLIF 293 (301)
Q Consensus 247 ~~av~~vl~~~~----~r~~a~~l~~~~~~~~~~~gss~~~l~~~v~~~~~ 293 (301)
...+.++++|.. +|+.|....+.+.+--...+-...+.-..++++.+
T Consensus 15 ~~~L~~I~~D~sVPRNIRraa~ea~~~L~~e~~~~~vRaA~AIs~LdeIs~ 65 (88)
T PRK04330 15 IQMLEEIINDTSVPRNIRRAATEAKEILLNEEESPGVRAATAISILDEISN 65 (88)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHhhc
Confidence 334456677764 55555555555554222233335566667777654
No 209
>COG1619 LdcA Uncharacterized proteins, homologs of microcin C7 resistance protein MccF [Defense mechanisms]
Probab=22.52 E-value=2.2e+02 Score=26.27 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCC
Q 047662 122 DQVQFQELAFGLELCNRPFLWVVRPD 147 (301)
Q Consensus 122 ~~~~~~~~~~al~~~~~~~iw~~~~~ 147 (301)
..+.+.++.+++...+.+.||.+.+.
T Consensus 59 ~~~R~~dL~~af~d~~vk~Il~~rGG 84 (313)
T COG1619 59 DEERAEDLMSAFSDPDVKAILCVRGG 84 (313)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEcccC
Confidence 35778889999999999999998765
No 210
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=22.51 E-value=48 Score=27.41 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=16.2
Q ss_pred ceeeeEEEeecCCCCCCCHHHHHHHHHHHhC
Q 047662 225 DIWKVGLRFDKNESGIITREEIKNKVDQVLG 255 (301)
Q Consensus 225 ~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~ 255 (301)
+.-|+|+.+ |+++|.++|.++++
T Consensus 109 ~~cGVGV~V--------T~E~I~~~V~~~i~ 131 (164)
T PF04558_consen 109 KACGVGVVV--------TPEQIEAAVEKYIE 131 (164)
T ss_dssp HTTTTT------------HHHHHHHHHHHHH
T ss_pred HHcCCCeEE--------CHHHHHHHHHHHHH
Confidence 334999888 79999999999995
No 211
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=22.46 E-value=1e+02 Score=30.57 Aligned_cols=28 Identities=18% Similarity=0.366 Sum_probs=22.3
Q ss_pred CcceEEecCCc------hhHHHHHHhCCCcccCC
Q 047662 184 SIACFLSHCGW------NSTMEGVSNGIPFLCWP 211 (301)
Q Consensus 184 ~v~~fItHgG~------~s~~Eal~~GvP~i~~P 211 (301)
..+++++|.|- +++.+|...++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34448888774 48999999999999984
No 212
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=22.22 E-value=2e+02 Score=28.68 Aligned_cols=82 Identities=17% Similarity=0.240 Sum_probs=48.2
Q ss_pred ecccchhh---hccCCCcceEEecCC---chhHHHHHHhCCCcccCCC-----------CCchhhh----HH--hhhcee
Q 047662 171 IGWAPQQK---VLNHPSIACFLSHCG---WNSTMEGVSNGIPFLCWPY-----------FAEQFLN----EK--YICDIW 227 (301)
Q Consensus 171 ~~~~pq~~---iL~h~~v~~fItHgG---~~s~~Eal~~GvP~i~~P~-----------~~DQ~~N----a~--~~~~~~ 227 (301)
.+-+++.+ +|+++.+ ||-=|. .-+-+|||+.|+|.|--=+ +.+.+.. ++ +++...
T Consensus 327 HG~l~~~ef~~lL~~akv--fiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKV--FIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhE--eeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 34455554 7888887 887665 3488999999998864211 1111111 11 222212
Q ss_pred eeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 228 KVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 228 G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
|-=.+... +.-+.++|++||+++|.++
T Consensus 405 G~PhVytV---d~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTV---DINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEE---cCCCHHHHHHHHHHHHhcC
Confidence 32223321 2347899999999999765
No 213
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=21.89 E-value=2.7e+02 Score=23.24 Aligned_cols=100 Identities=9% Similarity=-0.063 Sum_probs=50.2
Q ss_pred hHHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccch-
Q 047662 98 CLEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQ- 176 (301)
Q Consensus 98 ~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq- 176 (301)
+-.+|.++. ..+|+.|. ..-.+..++++....+-.++=++...+.. ...+... .+..++++.+..
T Consensus 24 lG~~la~~g---~~lV~GGg----~~GlM~a~a~ga~~~gG~viGi~p~~l~~---~~~~~~~----~~~~i~~~~~~~R 89 (178)
T TIGR00730 24 LGAYLAGQG---WGLVYGGG----RVGLMGAIADAAMENGGTAVGVNPSGLFS---GEVVHQN----LTELIEVNGMHER 89 (178)
T ss_pred HHHHHHHCC---CEEEECCC----hHhHHHHHHHHHHhcCCeEEEecchhhhh---hhccCCC----CCceEEECCHHHH
Confidence 344565442 56777774 23345667777766665555444221100 0001100 011223333332
Q ss_pred hhhccCCCcceEEecCCchhHHHHHH---------hCCCcccCC
Q 047662 177 QKVLNHPSIACFLSHCGWNSTMEGVS---------NGIPFLCWP 211 (301)
Q Consensus 177 ~~iL~h~~v~~fItHgG~~s~~Eal~---------~GvP~i~~P 211 (301)
..+|-..+-..++--||.||+-|... +.+|++.+=
T Consensus 90 k~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 90 KAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 23444444445777789999888743 488888764
No 214
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=21.87 E-value=3e+02 Score=21.64 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=21.9
Q ss_pred cceEEecCC------chhHHHHHHhCCCcccCCC
Q 047662 185 IACFLSHCG------WNSTMEGVSNGIPFLCWPY 212 (301)
Q Consensus 185 v~~fItHgG------~~s~~Eal~~GvP~i~~P~ 212 (301)
.+++++|.| .+.+.+|...++|+|.+.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 334888866 4588899999999999853
No 215
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=21.79 E-value=2.7e+02 Score=20.37 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=24.9
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCCCh----HHHHHHHHHHHH
Q 047662 245 EIKNKVDQVLGHQDFKARALELKEKAMSSIREGGSS----RKTFQNFLEWLI 292 (301)
Q Consensus 245 ~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~gss----~~~l~~~v~~~~ 292 (301)
++...+.++++|.+.=+|.++.+..+.+....++.+ ..+....++++.
T Consensus 10 ~~~~~L~~I~~D~sVPRNIRr~a~ea~~~L~~e~~~~~vRaataIs~LdeIs 61 (85)
T PF03685_consen 10 QAIQMLERIINDTSVPRNIRRAAEEAKEILNNEEESPGVRAATAISILDEIS 61 (85)
T ss_dssp HHHHHHHHHHT-TTS-HHHHHHHHHHHHHCT-TTS-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHhCCCcchhHhHHHHHHHHHHhh
Confidence 344555677777765555555555555544444443 445556666654
No 216
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.69 E-value=1.4e+02 Score=27.04 Aligned_cols=54 Identities=9% Similarity=0.098 Sum_probs=36.6
Q ss_pred CCCcceEEecCCchhHHHHHH----hCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh
Q 047662 182 HPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ 257 (301)
Q Consensus 182 h~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~ 257 (301)
.+++ +|+=||-||++.+.. .++|++++-.. .+|..- .++.+++.+++++++++.
T Consensus 63 ~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~------~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 63 QADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLT------DLDPDNALQQLSDVLEGH 120 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCccc------ccCHHHHHHHHHHHHcCC
Confidence 3455 999999999999974 36677666320 123222 246788999999998654
No 217
>TIGR00075 hypD hydrogenase expression/formation protein HypD. HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes. This protein has been found in gram-negative and gram-positive bacteria and Archaea.
Probab=21.50 E-value=2.6e+02 Score=26.36 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=18.1
Q ss_pred HHHhhcCCCCceEEEEecCCccCCHHHHHHHHHHH
Q 047662 99 LEWLDQQQPSSVLYAAFGSFTILDQVQFQELAFGL 133 (301)
Q Consensus 99 ~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al 133 (301)
.+...+++++.|||++-|--++ .+.....+.+|.
T Consensus 128 l~iA~~nPdk~VVF~avGFETT-aP~~A~~i~~a~ 161 (369)
T TIGR00075 128 LKIAKENPDRKVVFFAIGFETT-APTTASTLLSAK 161 (369)
T ss_pred HHHHHHCCCCeEEEEecCchhc-cHHHHHHHHHHH
Confidence 3444556667788877775443 233333444444
No 218
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=21.32 E-value=4.3e+02 Score=21.55 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=39.1
Q ss_pred hhhhHHhhhceeeeEEEeecCCCCCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHh
Q 047662 216 QFLNEKYICDIWKVGLRFDKNESGIITREEIKNKVDQVLGHQ---DFKARALELKEKAMS 272 (301)
Q Consensus 216 Q~~Na~~~~~~~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~---~~r~~a~~l~~~~~~ 272 (301)
+..|.++-++ +|.-.++.. ...++++|...+++-|.|+ +++..+.++.++.+-
T Consensus 97 ~~lN~~Y~~k-FGfpFvi~v---~g~~~~~Il~~l~~Rl~n~~~~E~~~a~~Ev~kIa~~ 152 (157)
T TIGR03164 97 TRLNNAYRAR-FGFPFIMAV---KGKTKQSILAAFEARLNNDRETEFARALREIERIARF 152 (157)
T ss_pred HHHHHHHHHH-CCCeeEEee---CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4568888876 598888875 3348999999999888775 566666666666543
No 219
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=21.04 E-value=5.3e+02 Score=25.72 Aligned_cols=28 Identities=7% Similarity=0.106 Sum_probs=22.8
Q ss_pred CcceEEecCC------chhHHHHHHhCCCcccCC
Q 047662 184 SIACFLSHCG------WNSTMEGVSNGIPFLCWP 211 (301)
Q Consensus 184 ~v~~fItHgG------~~s~~Eal~~GvP~i~~P 211 (301)
..+++++|.| .+++.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3455899988 457889999999999995
No 220
>PLN02859 glutamine-tRNA ligase
Probab=20.66 E-value=2e+02 Score=30.02 Aligned_cols=38 Identities=18% Similarity=0.353 Sum_probs=28.7
Q ss_pred eeeEEEeecCCCCCCCHHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHh
Q 047662 227 WKVGLRFDKNESGIITREEIKNKVDQVLGHQ-------DFKARALELKEKAMS 272 (301)
Q Consensus 227 ~G~G~~l~~~~~~~~~~~~l~~av~~vl~~~-------~~r~~a~~l~~~~~~ 272 (301)
-|+|+.+ |+++|.++|.+++++. .|+.|.-.+-..+++
T Consensus 113 CGVGV~V--------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~ 157 (788)
T PLN02859 113 CGVGVVV--------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRK 157 (788)
T ss_pred CCCCEEE--------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHh
Confidence 3999988 7999999999998543 466666666666665
No 221
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.66 E-value=5.4e+02 Score=23.25 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=39.8
Q ss_pred cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhhhcCCceeecccchhhhccCCCcceEEecCC--chhH
Q 047662 120 ILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQERVSARGRMIGWAPQQKVLNHPSIACFLSHCG--WNST 197 (301)
Q Consensus 120 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~~pq~~iL~h~~v~~fItHgG--~~s~ 197 (301)
......+..+.++.++.|.++++-++..... ..+... ....+.=..-....|+++.++.|+| ..=.
T Consensus 140 ~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~---~~~~~~---------~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~ 207 (293)
T COG2159 140 YPDDPRLYPIYEAAEELGVPVVIHTGAGPGG---AGLEKG---------HSDPLYLDDVARKFPELKIVLGHMGEDYPWE 207 (293)
T ss_pred CCCChHHHHHHHHHHHcCCCEEEEeCCCCCC---cccccC---------CCCchHHHHHHHHCCCCcEEEEecCCCCchh
Confidence 3445567889999999999999977654110 000000 0011111222556789999999999 4333
Q ss_pred HHH
Q 047662 198 MEG 200 (301)
Q Consensus 198 ~Ea 200 (301)
.|+
T Consensus 208 ~~a 210 (293)
T COG2159 208 LEA 210 (293)
T ss_pred HHH
Confidence 443
No 222
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=20.25 E-value=53 Score=22.72 Aligned_cols=23 Identities=26% Similarity=0.312 Sum_probs=17.4
Q ss_pred ccchhhhccCCCcceEEecCCch
Q 047662 173 WAPQQKVLNHPSIACFLSHCGWN 195 (301)
Q Consensus 173 ~~pq~~iL~h~~v~~fItHgG~~ 195 (301)
-.|..-+|++...+++||+.|.+
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 35777899999999999999976
No 223
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=20.24 E-value=7.6e+02 Score=23.52 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=77.5
Q ss_pred chHHHhhcCCCCceEEEEecCC----ccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCCCchhhh-------h-
Q 047662 97 SCLEWLDQQQPSSVLYAAFGSF----TILDQVQFQELAFGLELCNRPFLWVVRPDITTDANDRYPDGFQER-------V- 164 (301)
Q Consensus 97 ~~~~~l~~~~~~~vvyvs~GS~----~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~lp~~~~~~-------~- 164 (301)
.+...|.+.++++||+.--=.+ ..++.++.+++++.+...+.-.+.-+.- ..+-+++++. .
T Consensus 161 ~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-------QGF~~GleeDa~~lR~~a~ 233 (396)
T COG1448 161 GMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-------QGFADGLEEDAYALRLFAE 233 (396)
T ss_pred HHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-------hhhccchHHHHHHHHHHHH
Confidence 3556677777887777643333 3467899999999987666433322211 1122222211 0
Q ss_pred -cCCceee-cccchhhhccCCCcceEEecCCchhHHHHHHhCCCcccCCCCCchhhhHHhhhceeeeEEEeecCCCCCCC
Q 047662 165 -SARGRMI-GWAPQQKVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFAEQFLNEKYICDIWKVGLRFDKNESGIIT 242 (301)
Q Consensus 165 -~~~~~v~-~~~pq~~iL~h~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~Na~~~~~~~G~G~~l~~~~~~~~~ 242 (301)
....++. ++.-... |-...+|+++-.+--......+..-++.++.-.+.-=+.....++.. .++
T Consensus 234 ~~~~~lva~S~SKnfg-LYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~-------------IL~ 299 (396)
T COG1448 234 VGPELLVASSFSKNFG-LYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVAT-------------ILN 299 (396)
T ss_pred hCCcEEEEehhhhhhh-hhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHH-------------HhC
Confidence 1113343 3333333 33456777777665555555444433333333332222222222110 012
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHhHhhcCC
Q 047662 243 REEIKNKVDQVLGHQDFKARALELKEKAMSSIREGG 278 (301)
Q Consensus 243 ~~~l~~av~~vl~~~~~r~~a~~l~~~~~~~~~~~g 278 (301)
-.+|++.-.+-++ .||+|..+++..+.+..+.-+
T Consensus 300 ~p~Lra~W~~El~--~Mr~Ri~~mR~~lv~~L~~~~ 333 (396)
T COG1448 300 NPELRAEWEQELE--EMRQRILEMRQALVDALKALG 333 (396)
T ss_pred CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhC
Confidence 2222222222221 588888888888887766633
Done!