Query 047663
Match_columns 208
No_of_seqs 148 out of 1858
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 13:24:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047663.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047663hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 7.6E-52 1.6E-56 350.3 17.4 196 2-202 302-499 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 5.6E-50 1.2E-54 341.7 17.9 195 1-202 293-488 (489)
3 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-49 2.9E-54 346.6 19.7 205 1-207 334-539 (543)
4 PLN02394 trans-cinnamate 4-mon 100.0 5.4E-49 1.2E-53 340.2 19.2 200 2-202 301-502 (503)
5 PLN02183 ferulate 5-hydroxylas 100.0 1.3E-48 2.7E-53 338.8 18.8 199 2-202 312-512 (516)
6 PTZ00404 cytochrome P450; Prov 100.0 2.3E-48 5E-53 334.6 18.8 190 2-201 291-482 (482)
7 PLN00110 flavonoid 3',5'-hydro 100.0 2.8E-48 6.2E-53 335.6 19.5 206 1-207 296-502 (504)
8 PLN03234 cytochrome P450 83B1; 100.0 2E-48 4.4E-53 336.3 18.4 200 1-201 295-498 (499)
9 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-48 4.5E-53 335.4 16.9 196 1-202 298-496 (497)
10 PLN03112 cytochrome P450 famil 100.0 1.1E-47 2.5E-52 332.7 20.0 207 1-207 303-513 (514)
11 PLN02169 fatty acid (omega-1)- 100.0 8.6E-48 1.9E-52 332.3 17.9 190 1-201 308-499 (500)
12 PLN02738 carotene beta-ring hy 100.0 2.2E-47 4.8E-52 336.3 19.2 200 1-204 398-597 (633)
13 PLN02290 cytokinin trans-hydro 100.0 1.7E-47 3.6E-52 331.8 18.0 192 1-202 323-515 (516)
14 PLN00168 Cytochrome P450; Prov 100.0 2.3E-47 4.9E-52 331.2 18.5 201 2-203 314-518 (519)
15 PLN02500 cytochrome P450 90B1 100.0 2.8E-47 6.1E-52 328.5 18.6 195 1-200 286-488 (490)
16 KOG0159 Cytochrome P450 CYP11/ 100.0 5.8E-48 1.3E-52 321.9 13.8 195 1-202 323-518 (519)
17 PLN03018 homomethionine N-hydr 100.0 8.4E-47 1.8E-51 328.1 20.1 204 1-205 321-527 (534)
18 PLN02687 flavonoid 3'-monooxyg 100.0 5.3E-47 1.2E-51 328.7 18.6 206 2-207 305-514 (517)
19 PLN02966 cytochrome P450 83A1 100.0 6.7E-47 1.4E-51 327.1 18.9 192 1-195 296-493 (502)
20 PLN03195 fatty acid omega-hydr 100.0 4.5E-47 9.8E-52 329.1 16.0 196 1-202 299-516 (516)
21 PLN02426 cytochrome P450, fami 100.0 1E-46 2.2E-51 325.6 17.6 198 1-202 300-500 (502)
22 PF00067 p450: Cytochrome P450 100.0 2.3E-47 4.9E-52 322.8 13.3 170 2-174 270-440 (463)
23 PLN02655 ent-kaurene oxidase 100.0 2.1E-46 4.6E-51 321.3 17.3 195 1-202 269-464 (466)
24 PLN02774 brassinosteroid-6-oxi 100.0 3.7E-46 8E-51 319.6 18.0 188 1-199 271-461 (463)
25 PLN03141 3-epi-6-deoxocathaste 100.0 8.5E-46 1.8E-50 316.5 17.3 189 1-202 258-450 (452)
26 PLN02936 epsilon-ring hydroxyl 100.0 2E-45 4.2E-50 317.0 17.3 199 1-204 285-484 (489)
27 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-44 2.3E-49 312.3 17.4 190 2-202 295-488 (490)
28 PLN02196 abscisic acid 8'-hydr 100.0 1E-44 2.2E-49 310.7 16.5 188 1-200 271-461 (463)
29 PLN02987 Cytochrome P450, fami 100.0 8.8E-44 1.9E-48 305.3 18.6 193 2-203 275-470 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 5.2E-43 1.1E-47 286.8 14.6 199 2-202 281-485 (486)
31 PLN02648 allene oxide synthase 100.0 4.9E-38 1.1E-42 269.4 15.0 164 5-174 283-462 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 4.2E-38 9.1E-43 265.8 14.0 144 2-174 244-387 (411)
33 COG1759 5-formaminoimidazole-4 66.2 14 0.0003 30.5 4.8 69 56-160 275-351 (361)
34 PF05952 ComX: Bacillus compet 52.1 17 0.00037 21.8 2.3 23 17-39 5-27 (57)
35 PF06973 DUF1297: Domain of un 43.3 6.7 0.00014 29.6 -0.4 71 54-160 100-178 (188)
36 KOG3506 40S ribosomal protein 37.7 15 0.00033 21.7 0.6 11 137-147 12-22 (56)
37 PF09201 SRX: SRX; InterPro: 36.8 33 0.00072 24.6 2.3 23 144-166 18-40 (148)
38 PF12508 DUF3714: Protein of u 34.1 41 0.00088 25.8 2.6 43 53-96 52-94 (200)
39 PF12444 Sox_N: Sox developmen 33.3 39 0.00084 22.1 2.0 20 155-174 61-80 (84)
40 TIGR03779 Bac_Flav_CT_M Bacter 32.5 12 0.00026 32.0 -0.6 20 78-97 279-298 (410)
41 PF08285 DPM3: Dolichol-phosph 29.4 80 0.0017 20.9 3.1 27 13-39 55-81 (91)
42 PF13993 YccJ: YccJ-like prote 26.6 62 0.0013 19.7 1.9 32 4-35 8-40 (69)
43 PF14824 Sirohm_synth_M: Siroh 23.3 1.1E+02 0.0023 15.8 2.2 15 24-38 15-29 (30)
44 PF07886 BA14K: BA14K-like pro 22.4 82 0.0018 16.3 1.7 15 133-147 17-31 (31)
45 PF02663 FmdE: FmdE, Molybdenu 20.9 80 0.0017 22.1 2.0 21 144-164 5-25 (131)
46 PF14550 Peptidase_U35_2: Puta 20.4 70 0.0015 22.5 1.6 23 75-97 71-93 (122)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.6e-52 Score=350.25 Aligned_cols=196 Identities=30% Similarity=0.604 Sum_probs=175.4
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDC 81 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d~ 81 (208)
|++||+||||.++++++|+|++||++|+|||+||++++.....++++.+.+|+||++||+|+||+||+++...|.+++|+
T Consensus 302 Fl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~ 381 (499)
T KOG0158|consen 302 FLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDY 381 (499)
T ss_pred HHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCce
Confidence 68999999999999999999999999999999999997654449999999999999999999999999999779999999
Q ss_pred eec-CeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 82 KIG-NYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 82 ~l~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
++. ++.|++|+.|.++.+++|+||++||||++|+||||.+++.. ...+..|+|||.|+|+|+|++||.+|+|+.+
T Consensus 382 ~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L 457 (499)
T KOG0158|consen 382 EIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK----SRHPGAYLPFGVGPRNCIGMRFALMEAKLAL 457 (499)
T ss_pred ecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc----ccCCccccCCCCCccccHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999999999976532 3467899999999999999999999999999
Q ss_pred HHHHHhCeeEecCCCCCCCCCC-CCCccCCCCCCeEEEEeecC
Q 047663 161 AAMIQCFNFKVTSPDGVVDMTE-RPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 161 ~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~ 202 (208)
++||++|+++.++ .+...... ..+.+..++.++++++++|.
T Consensus 458 ~~lL~~f~~~~~~-~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 458 AHLLRNFSFEVCP-TTIIPLEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHHHhhCEEecCC-cccCcccCCccceeeecCCceEEEEEeCC
Confidence 9999999999987 33333111 22566678888999999884
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.6e-50 Score=341.68 Aligned_cols=195 Identities=53% Similarity=0.980 Sum_probs=178.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
|+++||.|||+.++.|++.+|+.||++|+|+++||++++|.+..++.+|+.++|||+|+|+|++|++|++|... |.+++
T Consensus 293 dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~ 372 (489)
T KOG0156|consen 293 DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE 372 (489)
T ss_pred HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC
Confidence 68899999999999999999999999999999999999998888999999999999999999999999999876 99999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|+.++||.||+||.|+++.|++|+||++|+||++|+||||++++ +.+.....++|||.|+|+|||..+|.+++.++
T Consensus 373 d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~ 448 (489)
T KOG0156|consen 373 DTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN----DGKGLDFKLIPFGSGRRICPGEGLARAELFLF 448 (489)
T ss_pred CeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc----cccCCceEecCCCCCcCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999864 22236778999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++.+|++|||+++.+ .+++... +.+...+.++.+...+|.
T Consensus 449 la~llq~F~w~~~~~--~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 449 LANLLQRFDWKLPGG--KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HHHHHheeeeecCCC--CCCCccc-ccceecCCcceeeeecCC
Confidence 999999999999876 5566655 465667778888877764
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.4e-49 Score=346.62 Aligned_cols=205 Identities=34% Similarity=0.686 Sum_probs=178.9
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~ 79 (208)
++++||+|||+.+++|++++|+.||++|+|+++||+++++.+..++.+++.++||++||++|++|++|+++.. .|.+.+
T Consensus 334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~ 413 (543)
T PLN02971 334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS 413 (543)
T ss_pred HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence 4789999999999999999999999999999999999998777899999999999999999999999999984 488999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|++++|+.||||+.|.++.|++|+||++|+||++|+||||++++... .....++.|+|||+|+|+|+|++||++|++++
T Consensus 414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~-~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~ 492 (543)
T PLN02971 414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEV-TLTENDLRFISFSTGKRGCAAPALGTAITTMM 492 (543)
T ss_pred CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccc-cccCCCCccCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999653211 11124568999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCCCCCc
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCAPSIL 207 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 207 (208)
++.||++|+|++.+++..+++....+ ++..+.++.+.+++|...++|
T Consensus 493 la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 539 (543)
T PLN02971 493 LARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRLSEDLY 539 (543)
T ss_pred HHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecCCcccc
Confidence 99999999999877544556655555 554566899999998644433
No 4
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=5.4e-49 Score=340.18 Aligned_cols=200 Identities=39% Similarity=0.754 Sum_probs=173.8
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeeccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVED 80 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~d 80 (208)
+++||+|||+.+++|++++|++||++|+||++|++++++.+..++.+++.++||++||++|++|++|+++... |.+.+|
T Consensus 301 ~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d 380 (503)
T PLN02394 301 INVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLED 380 (503)
T ss_pred HHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCC
Confidence 5799999999999999999999999999999999999986666788899999999999999999999999976 888899
Q ss_pred ceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 81 CKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 81 ~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
++++|+.||+||.|.++.|++|+||++|+||++|+||||++++... ......+.|+|||+|+|+|+|++||++||++++
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~-~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKV-EANGNDFRFLPFGVGRRSCPGIILALPILGIVL 459 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcc-cccCCCCceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998653211 111235679999999999999999999999999
Q ss_pred HHHHHhCeeEecCCCCCCCCCCCCC-ccCCCCCCeEEEEeecC
Q 047663 161 AAMIQCFNFKVTSPDGVVDMTERPG-LASPRAQDLVCVPVARC 202 (208)
Q Consensus 161 ~~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~ 202 (208)
|.++++|++++.++...++.+...+ .....+.++.+++.+|.
T Consensus 460 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 460 GRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 9999999999876542345544343 44436679999999986
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.3e-48 Score=338.83 Aligned_cols=199 Identities=42% Similarity=0.863 Sum_probs=173.2
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDC 81 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d~ 81 (208)
+++||+|||+.+++|++++|++||++|+|+++|++++++....++.+++.++||++||++|++|++|+++...|.+.+|+
T Consensus 312 ~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~ 391 (516)
T PLN02183 312 VMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDA 391 (516)
T ss_pred HHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCce
Confidence 68999999999999999999999999999999999999866678899999999999999999999999999889999999
Q ss_pred eecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHHH
Q 047663 82 KIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLA 161 (208)
Q Consensus 82 ~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 161 (208)
+++|+.||||+.|.++.+++||||++|+||++|+||||++++.. +....++.|+|||+|+|+|+|++||++|+++++|
T Consensus 392 ~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~--~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la 469 (516)
T PLN02183 392 EVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP--DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVA 469 (516)
T ss_pred eECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCc--cccCCcceecCCCCCCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999964321 1122456899999999999999999999999999
Q ss_pred HHHHhCeeEecCCCC--CCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 162 AMIQCFNFKVTSPDG--VVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 162 ~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
.|+++|++++.++.. ..+.....+.+.+.+.++.+.+++|-
T Consensus 470 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 512 (516)
T PLN02183 470 HLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRL 512 (516)
T ss_pred HHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCC
Confidence 999999999866532 12222233555556668888888884
No 6
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=2.3e-48 Score=334.64 Aligned_cols=190 Identities=37% Similarity=0.591 Sum_probs=168.6
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeeeccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVED 80 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~d 80 (208)
+++||+|||+.+++|++++|++||++|+||++|+++++++...++.+++.++||+++|++|++|++|+++.. .|.+.+|
T Consensus 291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 689999999999999999999999999999999999998766788999999999999999999999999974 5999999
Q ss_pred cee-cCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 81 CKI-GNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 81 ~~l-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
+++ +|+.||+|+.|.++.+++|+||++|+||++|+||||++.. .+..|+|||+|+|+|+|++||++|++++
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~--------~~~~~~pFg~G~R~C~G~~~A~~e~~~~ 442 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD--------SNDAFMPFSIGPRNCVGQQFAQDELYLA 442 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC--------CCCceeccCCCCCCCccHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998642 3467999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeec
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVAR 201 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (208)
++.++++|+++.++++ .++.....++++. +.++.+++++|
T Consensus 443 la~ll~~f~~~~~~~~-~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 443 FSNIILNFKLKSIDGK-KIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred HHHHHHhcEEecCCCC-CCCcccccceeec-CCCceeeeecC
Confidence 9999999999986543 2222233455554 56788888776
No 7
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=2.8e-48 Score=335.63 Aligned_cols=206 Identities=45% Similarity=0.844 Sum_probs=178.6
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~ 79 (208)
++++||+|||+.+++|++++|+.||++|+|+++|++++++....++.+++.++||+++|++|++|++|+++.. .|.+.+
T Consensus 296 ~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 375 (504)
T PLN00110 296 NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ 375 (504)
T ss_pred hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC
Confidence 4689999999999999999999999999999999999998767789999999999999999999999999984 599999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|++++|+.||+|+.|.++.+++|+||++|+||++|+||||++++..........+.++|||+|+|.|+|++||++|++++
T Consensus 376 d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 455 (504)
T PLN00110 376 ACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455 (504)
T ss_pred CeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999653221111112357999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCCCCCc
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCAPSIL 207 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 207 (208)
++.|+++|+|++.++. .+++....+++..++.++.+++++|...|-|
T Consensus 456 la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 502 (504)
T PLN00110 456 LGTLVHSFDWKLPDGV-ELNMDEAFGLALQKAVPLSAMVTPRLHQSAY 502 (504)
T ss_pred HHHHHHhceeecCCCC-ccCcccccccccccCCCceEeeccCCCchhc
Confidence 9999999999986652 3333334466677778999999999766655
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=2e-48 Score=336.27 Aligned_cols=200 Identities=38% Similarity=0.771 Sum_probs=175.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
++++||+|||+.+++|++++|++||++|+|+++|+++++++...++.+++.++||+++|++|++|++|+++... |.+.+
T Consensus 295 ~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~ 374 (499)
T PLN03234 295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIA 374 (499)
T ss_pred HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCC
Confidence 47899999999999999999999999999999999999987667889999999999999999999999999864 99999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPA 158 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 158 (208)
|++++|+.||+||.|.++.+++||||++| +||++|+||||+++... ......++.++|||+|+|+|+|+++|++||++
T Consensus 375 d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~-~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~ 453 (499)
T PLN03234 375 DAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKG-VDFKGQDFELLPFGSGRRMCPAMHLGIAMVEI 453 (499)
T ss_pred CeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCC-cCcCCCcceEeCCCCCCCCCCChHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999965321 11223467899999999999999999999999
Q ss_pred HHHHHHHhCeeEecCCC--CCCCCCCCCCccCCCCCCeEEEEeec
Q 047663 159 TLAAMIQCFNFKVTSPD--GVVDMTERPGLASPRAQDLVCVPVAR 201 (208)
Q Consensus 159 ~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (208)
+++.|+++|+|++.++. ..+......++...++..+.+.+++|
T Consensus 454 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 454 PFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred HHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 99999999999997652 23344445577777777788887776
No 9
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-48 Score=335.38 Aligned_cols=196 Identities=35% Similarity=0.687 Sum_probs=172.1
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCC-CCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRL-VQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~ 79 (208)
.|++||+|||+.+++|++++|+.||++|+|+++|++++++++.. .......+|+|+++|++|+|||+|++|...|.+.+
T Consensus 298 tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~ 377 (497)
T KOG0157|consen 298 TFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATK 377 (497)
T ss_pred HheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCC
Confidence 37899999999999999999999999999999999999975433 23333336999999999999999999999999999
Q ss_pred ccee-cCeeeCCCCEEEEchhhhccCCCCCC-CCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 80 DCKI-GNYVIPKDTVLFVNLWSMGRDPKIWK-NPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 80 d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
|+++ +|+.||+|+.|.++.+++|||+++|+ ||++|+|+||.++.... ..++++|+|||+|+|.|+|++||++|||
T Consensus 378 d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~---~~~~~~fipFsaGpR~CiG~~fA~lemK 454 (497)
T KOG0157|consen 378 DVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA---KRHPFAFIPFSAGPRNCIGQKFAMLEMK 454 (497)
T ss_pred CeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC---CCCCccccCCCCCcccchhHHHHHHHHH
Confidence 9999 58999999999999999999999995 99999999999653321 2357899999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++++.+|++|+|++..+.. .......+.++..++.|++++|.
T Consensus 455 v~l~~ll~~f~~~~~~~~~---~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 455 VVLAHLLRRFRIEPVGGDK---PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred HHHHHHHHheEEEecCCCC---ceeeeEEEEEecCCeEEEEEeCC
Confidence 9999999999999877532 34456777888899999999985
No 10
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.1e-47 Score=332.74 Aligned_cols=207 Identities=38% Similarity=0.751 Sum_probs=179.0
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~ 79 (208)
++++||+|||+.+++|++++|++||++|+|+++|++++++.++.++.+++.++||++|+++|++|++|+++.. .|.+.+
T Consensus 303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 382 (514)
T PLN03112 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR 382 (514)
T ss_pred HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence 4689999999999999999999999999999999999998767789999999999999999999999999975 599999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCcc-ccCCccceeccCCCCCCCCCHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEID-VKGLHYQFLPFGTGRRGCPGLSLAMQELPA 158 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 158 (208)
|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||..+.+.... ....++.|+|||+|+|+|+|++||++||++
T Consensus 383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~ 462 (514)
T PLN03112 383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM 462 (514)
T ss_pred CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998754321111 112356799999999999999999999999
Q ss_pred HHHHHHHhCeeEecCCCC--CCCCCCCCCccCCCCCCeEEEEeecCCCCCc
Q 047663 159 TLAAMIQCFNFKVTSPDG--VVDMTERPGLASPRAQDLVCVPVARCAPSIL 207 (208)
Q Consensus 159 ~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 207 (208)
+++.+|++||+++..+.. .++.....++..+++.++.+++++|.++..|
T Consensus 463 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 513 (514)
T PLN03112 463 ALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHLY 513 (514)
T ss_pred HHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCccccc
Confidence 999999999999865422 2333334456666778999999999888766
No 11
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=8.6e-48 Score=332.29 Aligned_cols=190 Identities=24% Similarity=0.538 Sum_probs=165.3
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeeccc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVED 80 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d 80 (208)
++++||+|||+.+++|++++|+.||++|+|+++|+++++ +.+++.++||+++|++|+||++|+++...|.+.+|
T Consensus 308 ~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d 381 (500)
T PLN02169 308 SLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKP 381 (500)
T ss_pred HHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCC
Confidence 368999999999999999999999999999999999864 56789999999999999999999999998887777
Q ss_pred cee-cCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHH
Q 047663 81 CKI-GNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPA 158 (208)
Q Consensus 81 ~~l-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 158 (208)
.++ +|+.||+|+.|.++.|++||||++| +||++|+||||+++++.. ....++.|+|||+|+|+|+|++||++||++
T Consensus 382 ~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~--~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~ 459 (500)
T PLN02169 382 DVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGL--RHEPSYKFMAFNSGPRTCLGKHLALLQMKI 459 (500)
T ss_pred CCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCc--cCCCCccccCCCCCCCCCcCHHHHHHHHHH
Confidence 665 8999999999999999999999999 899999999999653321 112367899999999999999999999999
Q ss_pred HHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeec
Q 047663 159 TLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVAR 201 (208)
Q Consensus 159 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (208)
+++.||++|+|++.++. . +....+++..++.++.+++++|
T Consensus 460 ~la~ll~~f~~~~~~~~-~--~~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 460 VALEIIKNYDFKVIEGH-K--IEAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred HHHHHHHHCEEEEcCCC-C--cccccceEEecCCCEEEEEEeC
Confidence 99999999999987542 2 2233456667788999999887
No 12
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=2.2e-47 Score=336.28 Aligned_cols=200 Identities=29% Similarity=0.572 Sum_probs=173.1
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeeccc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVED 80 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d 80 (208)
++++||+|||+.+++|++++|++||++|+||++|+++++++ ..++.+++.++|||+|||+|+|||+|+++...|.+.+|
T Consensus 398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d 476 (633)
T PLN02738 398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEN 476 (633)
T ss_pred HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccC
Confidence 36899999999999999999999999999999999999874 56789999999999999999999999999988999999
Q ss_pred ceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 81 CKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 81 ~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
.+++|+.||+||.|.++.+.+|+||++|+||++|+||||+...... ......+.|+|||.|+|+|+|++||++||++++
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~-~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~L 555 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP-NETNQNFSYLPFGGGPRKCVGDMFASFENVVAT 555 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc-cccCCCCceeCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998532111 112245679999999999999999999999999
Q ss_pred HHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCCC
Q 047663 161 AAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCAP 204 (208)
Q Consensus 161 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 204 (208)
+.|+++|+|++..+... +....+.+..++.++.+++++|..+
T Consensus 556 A~Llr~F~~el~~~~~~--~~~~~~~~~~p~~~l~v~l~~R~~~ 597 (633)
T PLN02738 556 AMLVRRFDFQLAPGAPP--VKMTTGATIHTTEGLKMTVTRRTKP 597 (633)
T ss_pred HHHHHhCeeEeCCCCCC--cccccceEEeeCCCcEEEEEECCCC
Confidence 99999999998765322 2222345555677899999999643
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.7e-47 Score=331.84 Aligned_cols=192 Identities=28% Similarity=0.498 Sum_probs=170.3
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeeccc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVED 80 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d 80 (208)
++++||+|||+.+++|++++|++||++|+|+++|++++++.+ .++.+++.++||++|||+|++|++|+++...|.+.+|
T Consensus 323 ~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d 401 (516)
T PLN02290 323 TFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFED 401 (516)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCC
Confidence 368999999999999999999999999999999999999864 7889999999999999999999999999877999999
Q ss_pred ceecCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 81 CKIGNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 81 ~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
++++|+.||+|+.|.++.+++|+||++| +||++|+||||++++. .....|+|||.|+|+|+|+++|++|++++
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~l~ 475 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF------APGRHFIPFAAGPRNCIGQAFAMMEAKII 475 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC------CCCCeEecCCCCCCCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999 8999999999995321 12357999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++.||++|++++.++.. .....+++..+..++.+++++|.
T Consensus 476 la~ll~~f~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 476 LAMLISKFSFTISDNYR---HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred HHHHHHhceEeeCCCcc---cCccceeeecCCCCCeEEEEeCC
Confidence 99999999999876421 11222456667788999999886
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.3e-47 Score=331.18 Aligned_cols=201 Identities=39% Similarity=0.707 Sum_probs=171.8
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCC-CCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRN-RLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
+++||+|||+.+++|++++|++||++|+|+++|++++++++ ..++.+++.++||+++|++|++|++|+++... |.+.+
T Consensus 314 l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 393 (519)
T PLN00168 314 FLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE 393 (519)
T ss_pred HHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence 68999999999999999999999999999999999999753 56788999999999999999999999998864 99999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCC-cc-ccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSE-ID-VKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~-~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
|++++|+.||+|+.|.++.+++|+||++|+||++|+||||+++.... .+ ....++.|+|||+|+|+|+|++||++|++
T Consensus 394 d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~ 473 (519)
T PLN00168 394 DMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLE 473 (519)
T ss_pred CccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999743211 00 11234679999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCC
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCA 203 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (208)
++++.||++|+|++.++. .+++....+.+..++.++.+++++|..
T Consensus 474 ~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 474 YFVANMVREFEWKEVPGD-EVDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred HHHHHHHHHccceeCCCC-cCChhhhceeEEeecCCcEEEEEeccC
Confidence 999999999999987642 233322233445556678999998864
No 15
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=2.8e-47 Score=328.55 Aligned_cols=195 Identities=24% Similarity=0.387 Sum_probs=164.7
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-----CCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCcee
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVG-----RNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISR 75 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~-----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r 75 (208)
++++||+|||+.+++|++++|+.||++|+|+++|++++++ .+..++.+++.++||++||++|++|++|+++...|
T Consensus 286 ~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R 365 (490)
T PLN02500 286 SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHR 365 (490)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeee
Confidence 3689999999999999999999999999999999999864 23357889999999999999999999999998889
Q ss_pred eecccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCcc---ccCCccceeccCCCCCCCCCHHHH
Q 047663 76 KAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEID---VKGLHYQFLPFGTGRRGCPGLSLA 152 (208)
Q Consensus 76 ~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A 152 (208)
.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++++..... ....++.|+|||+|+|+|+|++||
T Consensus 366 ~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A 445 (490)
T PLN02500 366 KALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELA 445 (490)
T ss_pred EeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999965321100 011356899999999999999999
Q ss_pred HHHHHHHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEee
Q 047663 153 MQELPATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVA 200 (208)
Q Consensus 153 ~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (208)
.+|++++++.||++|+|++.++.... ... .+ .++.++.+++.+
T Consensus 446 ~~el~~~la~ll~~f~~~~~~~~~~~---~~~-~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 446 KLEMAVFIHHLVLNFNWELAEADQAF---AFP-FV-DFPKGLPIRVRR 488 (490)
T ss_pred HHHHHHHHHHHHhccEEEEcCCCcce---ecc-cc-cCCCCceEEEEe
Confidence 99999999999999999987653211 111 22 234577777654
No 16
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.8e-48 Score=321.92 Aligned_cols=195 Identities=32% Similarity=0.499 Sum_probs=177.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC-CCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGR-NRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~ 79 (208)
|+++||.|||+.++.|.+|+|++||++|++|++|+.+++.. +..++.+++.++|||+|||+|++||+|.+++..|+..+
T Consensus 323 dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~ 402 (519)
T KOG0159|consen 323 DLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPK 402 (519)
T ss_pred HHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccch
Confidence 68899999999999999999999999999999999999976 57789999999999999999999999999999999999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|.+++||.||+||.|.+..+.+.+||+.|++|++|+||||++++. ...+++.++|||.|+|+|+||+||.+||-++
T Consensus 403 D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~----~~~~pF~~LPFGfG~R~C~GRRiAElEl~ll 478 (519)
T KOG0159|consen 403 DLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST----KTIHPFASLPFGFGPRMCLGRRIAELELHLL 478 (519)
T ss_pred hceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc----CCCCCceecCCCCCccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998752 2347899999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++.++++|+++.... ..++ .....+..|..++.+++++|.
T Consensus 479 Larllr~f~V~~~~~-~pv~--~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 479 LARLLRNFKVEFLHE-EPVE--YVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred HHHHHHhcceeecCC-CCcc--ceeEEEEcCCCCcceeeeeCC
Confidence 999999999998764 3333 334455667788999998885
No 17
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=8.4e-47 Score=328.06 Aligned_cols=204 Identities=37% Similarity=0.679 Sum_probs=174.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
++++||+|||+.+++|++++|+.||++|+|+++|++++++.+..++.+++.++||+++|++|++|++|+++... |.+.+
T Consensus 321 ~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~ 400 (534)
T PLN03018 321 EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400 (534)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCC
Confidence 36899999999999999999999999999999999999987677888999999999999999999999999875 88999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCc--cccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEI--DVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
|++++|+.||+|+.|.++.+++|+||++|+||++|+||||+++++... .....+..|+|||+|+|+|+|++||.+|++
T Consensus 401 d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~ 480 (534)
T PLN03018 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480 (534)
T ss_pred CeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999996432110 011245679999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCCCC
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCAPS 205 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 205 (208)
+++++|+++|++++.++...+++....+.+. .+.++.+++++|.++.
T Consensus 481 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~~~~ 527 (534)
T PLN03018 481 MMLARFLQGFNWKLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRLAPN 527 (534)
T ss_pred HHHHHHHHhceEEeCCCCCCCCcccccccee-cCCCeEEEEEeccccc
Confidence 9999999999999876532333332334333 4568999999996543
No 18
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5.3e-47 Score=328.73 Aligned_cols=206 Identities=47% Similarity=0.882 Sum_probs=175.0
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeeeccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVED 80 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~d 80 (208)
+++||+|||+.+++|++++|++||++++|+++|++++++.+..++.+++.++||+++|++|++|++|+++.. .|.+.+|
T Consensus 305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 679999999999999999999999999999999999988767788999999999999999999999999974 5999999
Q ss_pred ceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCc-cccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 81 CKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEI-DVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 81 ~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
++++|+.||+|+.|.++.+++|+||++|+||++|+||||++++.... .....++.++|||+|+|+|+|++||++||+++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997532110 11124567999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCC--CCCCCCCCCccCCCCCCeEEEEeecCCCCCc
Q 047663 160 LAAMIQCFNFKVTSPDG--VVDMTERPGLASPRAQDLVCVPVARCAPSIL 207 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 207 (208)
++.||++|++++.++.. .+++....+....+..++.+++++|.-+|-|
T Consensus 465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~ 514 (517)
T PLN02687 465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLPSAY 514 (517)
T ss_pred HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCChhhc
Confidence 99999999999876522 2222223344444556889999998644543
No 19
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=6.7e-47 Score=327.09 Aligned_cols=192 Identities=42% Similarity=0.780 Sum_probs=164.8
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCC--CCCCCCCCCCChhHHHHHHHHhCCCCCCCCc-eeee
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRN--RLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKA 77 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~--~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~ 77 (208)
++++||+|||+.+++|++++|++||++|+|+++|++++++.+ ..++.+++.++||++|+++|++|++|+++.. .|.+
T Consensus 296 ~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~ 375 (502)
T PLN02966 296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRAC 375 (502)
T ss_pred HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCccc
Confidence 468999999999999999999999999999999999998642 3578899999999999999999999999985 5999
Q ss_pred cccceecCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHH
Q 047663 78 VEDCKIGNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQEL 156 (208)
Q Consensus 78 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~ 156 (208)
.+|++++|+.||+||.|.++.+++||||++| +||++|+||||++++.. ....++.|+|||+|+|+|+|++||.+|+
T Consensus 376 ~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~---~~~~~~~~~pFg~G~R~C~G~~~A~~el 452 (502)
T PLN02966 376 IQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD---FKGTDYEFIPFGSGRRMCPGMRLGAAML 452 (502)
T ss_pred CCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC---cCCCcCCccCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999964321 1124568999999999999999999999
Q ss_pred HHHHHHHHHhCeeEecCCC--CCCCCCCCCCccCCCCCCeE
Q 047663 157 PATLAAMIQCFNFKVTSPD--GVVDMTERPGLASPRAQDLV 195 (208)
Q Consensus 157 ~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 195 (208)
+++++.||++|++++.++. ..++++...++...++.++.
T Consensus 453 ~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (502)
T PLN02966 453 EVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK 493 (502)
T ss_pred HHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeE
Confidence 9999999999999987652 12333444466554444444
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=4.5e-47 Score=329.14 Aligned_cols=196 Identities=25% Similarity=0.421 Sum_probs=166.0
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC--------------------CCCCCCCCCCCChhHHHHH
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGR--------------------NRLVQESDVPHLPYIQAII 60 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~--------------------~~~~~~~~~~~~~~l~~~i 60 (208)
++++||+|||+.+++|++++|+.||++|+||++|++++++. +..++.+++.++|||+|||
T Consensus 299 ~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi 378 (516)
T PLN03195 299 NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVI 378 (516)
T ss_pred HHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHH
Confidence 36899999999999999999999999999999999987642 2346788899999999999
Q ss_pred HHHhCCCCCCCCceeeeccccee-cCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceec
Q 047663 61 KESLRIHPPIPLISRKAVEDCKI-GNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLP 138 (208)
Q Consensus 61 ~E~lRl~~~~~~~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~ 138 (208)
+|+||++|+++...|.+.+|.++ +|+.||+|+.|.++.+++|+||++| +||++|+||||++++... ...++.|+|
T Consensus 379 ~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~---~~~~~~~~p 455 (516)
T PLN03195 379 TETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQ---NASPFKFTA 455 (516)
T ss_pred HHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcC---CCCCceEec
Confidence 99999999999988777777665 8999999999999999999999999 999999999999632111 124567999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 139 FGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 139 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
||+|+|+|+|++||++||+++++.++++|++++.++. .. ......+..++.++.+++++|.
T Consensus 456 FG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-~~--~~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 456 FQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-PV--KYRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred cCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-cc--eeeeeeEEecCCCEEEEEEeCC
Confidence 9999999999999999999999999999999986542 22 2222334556678899988873
No 21
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1e-46 Score=325.61 Aligned_cols=198 Identities=29% Similarity=0.461 Sum_probs=171.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCC-CCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRN-RLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~ 79 (208)
++++||+|||+.+++|++++|++||++|+||++|++++++.+ ..++.+++.++|||++|++|++|++|+++...|.+.+
T Consensus 300 ~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~ 379 (502)
T PLN02426 300 SFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAE 379 (502)
T ss_pred HHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeecc
Confidence 368999999999999999999999999999999999988753 3678899999999999999999999999988899999
Q ss_pred ccee-cCeeeCCCCEEEEchhhhccCCCCC-CCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 80 DCKI-GNYVIPKDTVLFVNLWSMGRDPKIW-KNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 80 d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
|.++ +|+.||+|+.|.++.+++||||++| +||++|+||||+++... ....++.++|||+|+|.|+|+++|++||+
T Consensus 380 d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~---~~~~~~~~~pFg~G~R~CiG~~~A~~e~~ 456 (502)
T PLN02426 380 DDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF---VPENPFKYPVFQAGLRVCLGKEMALMEMK 456 (502)
T ss_pred CCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc---CCCCCcccCCCCCCCCCCccHHHHHHHHH
Confidence 8887 8999999999999999999999999 99999999999863210 11245678999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++++.++++|++++.++... .+....+.+..++.++.+++++|.
T Consensus 457 ~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 457 SVAVAVVRRFDIEVVGRSNR-APRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred HHHHHHHHHceEEEecCCCC-CCcccceeEEecCCCEEEEEEEcc
Confidence 99999999999998643221 123334566677788999999885
No 22
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=2.3e-47 Score=322.78 Aligned_cols=170 Identities=41% Similarity=0.817 Sum_probs=155.3
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCC-Cceeeeccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIP-LISRKAVED 80 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~d 80 (208)
+++||+|||+.+++|++++|++||++|++|++|++++++....++.+++.++|||+||++|++|++|+++ .+.|.+.+|
T Consensus 270 ~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 270 LLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999976677889999999999999999999999999 556999999
Q ss_pred ceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 81 CKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 81 ~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
++++|+.||+|+.|+++.+++|+||++|+||++|+|+||++.+. .....+..|+|||.|+|.|+|++||++||++++
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 426 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG---ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFL 426 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS---TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998754 112357789999999999999999999999999
Q ss_pred HHHHHhCeeEecCC
Q 047663 161 AAMIQCFNFKVTSP 174 (208)
Q Consensus 161 ~~ll~~f~~~~~~~ 174 (208)
+.||++||+++.++
T Consensus 427 a~ll~~f~~~~~~~ 440 (463)
T PF00067_consen 427 AKLLRRFDFELVPG 440 (463)
T ss_dssp HHHHHHEEEEESTT
T ss_pred HHHHHhCEEEECCC
Confidence 99999999999765
No 23
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=2.1e-46 Score=321.29 Aligned_cols=195 Identities=31% Similarity=0.582 Sum_probs=172.0
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
++++||+|||+.+++|++++|++||++|+|+++|++++++.+. ++.+++.++||++++++|++|++|+++... |.+.+
T Consensus 269 ~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~ 347 (466)
T PLN02655 269 EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHE 347 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCC
Confidence 3689999999999999999999999999999999999998644 889999999999999999999999999875 99999
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|++++|+.||+|+.|+++.+++|+||++|+||++|+|+||++++... ...+.++|||+|+|.|+|++||.+||+++
T Consensus 348 d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 423 (466)
T PLN02655 348 DTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES----ADMYKTMAFGAGKRVCAGSLQAMLIACMA 423 (466)
T ss_pred CcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc----CCcccccCCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999653211 13467999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++.||++|++++.++.. ......+++..++.++.+++++|.
T Consensus 424 l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~ 464 (466)
T PLN02655 424 IARLVQEFEWRLREGDE--EKEDTVQLTTQKLHPLHAHLKPRG 464 (466)
T ss_pred HHHHHHHeEEEeCCCCc--cccchhheeEeecCCcEEEEeecC
Confidence 99999999999876532 122334556667789999998885
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=3.7e-46 Score=319.58 Aligned_cols=188 Identities=27% Similarity=0.434 Sum_probs=162.7
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC---CCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeee
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGR---NRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKA 77 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~ 77 (208)
++++||+|||+.+++|++++|+.||++|+|+++|++++++. +..++.+++.++||+++|++|++|++|+++...|.+
T Consensus 271 ~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~ 350 (463)
T PLN02774 271 TILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKT 350 (463)
T ss_pred HHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCccccc
Confidence 36899999999999999999999999999999999999863 245788999999999999999999999998877999
Q ss_pred cccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 78 VEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 78 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
.+|++++|+.||||+.|+++.+++|+||++|+||++|+||||++++.. ....|+|||+|+|+|+|++||.+||+
T Consensus 351 ~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~------~~~~~lpFG~G~r~C~G~~~A~~e~~ 424 (463)
T PLN02774 351 TQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE------SHNYFFLFGGGTRLCPGKELGIVEIS 424 (463)
T ss_pred CCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC------CCccccCcCCCCCcCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999964311 12358999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEe
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPV 199 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (208)
++++.||++|+|++.+++. ...... ..++.++.++++
T Consensus 425 ~~la~Ll~~f~~~~~~~~~---~~~~~~--~~p~~g~~~~~~ 461 (463)
T PLN02774 425 TFLHYFVTRYRWEEVGGDK---LMKFPR--VEAPNGLHIRVS 461 (463)
T ss_pred HHHHHHHHhceEEECCCCc---cccCCC--CCCCCCceEEee
Confidence 9999999999999976532 112222 224567777765
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=8.5e-46 Score=316.46 Aligned_cols=189 Identities=26% Similarity=0.392 Sum_probs=166.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC----CCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceee
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVG----RNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRK 76 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~ 76 (208)
++++||+|||+.+++|++++|+.||++|+++++|++++++ .+..++.+++.++||++|||+|++|++|+++...|.
T Consensus 258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~ 337 (452)
T PLN03141 258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRK 337 (452)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCccee
Confidence 4689999999999999999999999999999999998763 233467788899999999999999999998877799
Q ss_pred ecccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHH
Q 047663 77 AVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQEL 156 (208)
Q Consensus 77 ~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~ 156 (208)
+.+|++++||.||+|+.|.++.+++|+|+++|+||++|+||||++++. .++.|+|||+|+|+|+|++||.+|+
T Consensus 338 ~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-------~~~~~~pFG~G~R~C~G~~lA~~el 410 (452)
T PLN03141 338 AMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-------NNSSFTPFGGGQRLCPGLDLARLEA 410 (452)
T ss_pred ecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC-------CCCCCCCCCCCCCCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999996421 3567999999999999999999999
Q ss_pred HHHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 157 PATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 157 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
+++++.|+++|+|+..++. . .. ..++.+..++.+.+.+|.
T Consensus 411 ~~~la~ll~~f~~~~~~~~--~--~~--~~~~~~~~~~~~~~~~~~ 450 (452)
T PLN03141 411 SIFLHHLVTRFRWVAEEDT--I--VN--FPTVRMKRKLPIWVTRID 450 (452)
T ss_pred HHHHHHHHhcCeeecCCCC--e--ee--cccccCCCCceEEEEeCC
Confidence 9999999999999976542 1 11 134556678999999984
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=2e-45 Score=316.99 Aligned_cols=199 Identities=29% Similarity=0.537 Sum_probs=168.8
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCce-eeecc
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLIS-RKAVE 79 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~-r~~~~ 79 (208)
++++||+|||+.+++|++++|++||++|+++++|++++++. ..++.+++.+||||+||++|++|++|+++... |.+..
T Consensus 285 ~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 363 (489)
T PLN02936 285 SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVE 363 (489)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccC
Confidence 36889999999999999999999999999999999999875 34678889999999999999999999988877 44466
Q ss_pred cceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHH
Q 047663 80 DCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPAT 159 (208)
Q Consensus 80 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 159 (208)
|+.++|+.||+|+.|+++.+++|+||++|+||++|+|+||+.++... .....++.|+|||.|+|.|+|++||++|++++
T Consensus 364 ~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~-~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~ 442 (489)
T PLN02936 364 DVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVP-NETNTDFRYIPFSGGPRKCVGDQFALLEAIVA 442 (489)
T ss_pred ccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCc-cccCCCcceeCCCCCCCCCCCHHHHHHHHHHH
Confidence 77779999999999999999999999999999999999999643211 11123457999999999999999999999999
Q ss_pred HHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCCC
Q 047663 160 LAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCAP 204 (208)
Q Consensus 160 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 204 (208)
++.|+++|++++++++ .+.. ..+.+..++.++.|++++|..|
T Consensus 443 la~ll~~f~~~~~~~~-~~~~--~~~~~~~~~~~~~v~~~~R~~~ 484 (489)
T PLN02936 443 LAVLLQRLDLELVPDQ-DIVM--TTGATIHTTNGLYMTVSRRRVP 484 (489)
T ss_pred HHHHHHhCeEEecCCC-ccce--ecceEEeeCCCeEEEEEeeeCC
Confidence 9999999999987643 2222 2244455667899999998754
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.1e-44 Score=312.28 Aligned_cols=190 Identities=26% Similarity=0.444 Sum_probs=166.3
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCC----CCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeee
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRN----RLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKA 77 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~----~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~ 77 (208)
+++||+|||+.+++|++++|++||++|+|+++|++++++.. ..++.+++.++||++++++|++|++|+++...|.+
T Consensus 295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~ 374 (490)
T PLN02302 295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREA 374 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcc
Confidence 67999999999999999999999999999999999988642 12678889999999999999999999999888999
Q ss_pred cccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 78 VEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 78 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
.+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++... .+..++|||+|+|+|+|+++|.+|++
T Consensus 375 ~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~-------~~~~~~pFG~G~r~C~G~~lA~~e~~ 447 (490)
T PLN02302 375 KTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP-------KAGTFLPFGLGSRLCPGNDLAKLEIS 447 (490)
T ss_pred cCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC-------CCCCccCCCCCCcCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999996421 34678999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
++++.++++|++++.++.. ++... ....+..++.+++++|.
T Consensus 448 ~~la~ll~~f~~~~~~~~~--~~~~~--~~~~p~~~~~~~~~~~~ 488 (490)
T PLN02302 448 IFLHHFLLGYRLERLNPGC--KVMYL--PHPRPKDNCLARITKVA 488 (490)
T ss_pred HHHHHHHhcCeeEEcCCCC--cceeC--CCCCCCCCceEEEEecc
Confidence 9999999999999876432 22221 12445678888888875
No 28
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1e-44 Score=310.67 Aligned_cols=188 Identities=24% Similarity=0.437 Sum_probs=164.3
Q ss_pred CcccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC---CCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeee
Q 047663 1 DFLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGR---NRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKA 77 (208)
Q Consensus 1 ~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~ 77 (208)
++++||+|||+.+++|++++|++||++|+|+++|++++.+. +..++.+++.++||++|+++|++|++|++++..|.+
T Consensus 271 ~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~ 350 (463)
T PLN02196 271 GVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREA 350 (463)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceee
Confidence 36899999999999999999999999999999999998763 345788889999999999999999999999988999
Q ss_pred cccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHH
Q 047663 78 VEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELP 157 (208)
Q Consensus 78 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~ 157 (208)
.+|++++|+.||+|+.|.++.+++|+||++|+||++|+||||+... .+..++|||+|+|.|+|+++|++|++
T Consensus 351 ~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~--------~~~~~lpFG~G~r~C~G~~~A~~e~~ 422 (463)
T PLN02196 351 VEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP--------KPNTFMPFGNGTHSCPGNELAKLEIS 422 (463)
T ss_pred ccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--------CCCcccCcCCCCCCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998531 34679999999999999999999999
Q ss_pred HHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEee
Q 047663 158 ATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVA 200 (208)
Q Consensus 158 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (208)
++++.|+++|++++.+++. ++.. ..+..++.++.+++..
T Consensus 423 ~~la~ll~~f~~~~~~~~~--~~~~--~~~~~p~~~~~~~~~~ 461 (463)
T PLN02196 423 VLIHHLTTKYRWSIVGTSN--GIQY--GPFALPQNGLPIALSR 461 (463)
T ss_pred HHHHHHHHhcEEEEcCCCC--ceEE--cccccCCCCceEEEec
Confidence 9999999999999876532 2222 2223456677776654
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=8.8e-44 Score=305.25 Aligned_cols=193 Identities=26% Similarity=0.396 Sum_probs=168.5
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC---CCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeec
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGR---NRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAV 78 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~ 78 (208)
+++||+|||+.+++|++++|++||++++++++|++++.+. ...++.+++.++||++++++|++|++|+++...|.+.
T Consensus 275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~ 354 (472)
T PLN02987 275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAM 354 (472)
T ss_pred HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCC
Confidence 5799999999999999999999999999999999998752 3446778889999999999999999999987779999
Q ss_pred ccceecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHH
Q 047663 79 EDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPA 158 (208)
Q Consensus 79 ~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 158 (208)
+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++++.. ...+..++|||+|+|.|+|++||.+|+++
T Consensus 355 ~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~ 430 (472)
T PLN02987 355 TDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT----TVPSNVFTPFGGGPRLCPGYELARVALSV 430 (472)
T ss_pred CCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC----CCCCcceECCCCCCcCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999965321 11346799999999999999999999999
Q ss_pred HHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecCC
Q 047663 159 TLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARCA 203 (208)
Q Consensus 159 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (208)
+++.|+++|++++.+++ . ... ..+..+..++.+++++|..
T Consensus 431 ~la~ll~~f~~~~~~~~-~--~~~--~~~~~p~~~~~~~~~~r~~ 470 (472)
T PLN02987 431 FLHRLVTRFSWVPAEQD-K--LVF--FPTTRTQKRYPINVKRRDV 470 (472)
T ss_pred HHHHHHhceEEEECCCC-c--eee--cccccCCCCceEEEEeccc
Confidence 99999999999987653 2 222 3355677789999998853
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-43 Score=286.78 Aligned_cols=199 Identities=30% Similarity=0.577 Sum_probs=174.0
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCC-CCCCCCCCChhHHHHHHHHhCCCCCCCCceeeeccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRL-VQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVED 80 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d 80 (208)
++|||..||+.+..|++++|++||++++.+++|+.+++|++.. .+.++++++|.|++||+|++||++|.+...|.+.+|
T Consensus 281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D 360 (486)
T KOG0684|consen 281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHED 360 (486)
T ss_pred HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccc
Confidence 4799999999999999999999999999999999999987654 899999999999999999999999999999999999
Q ss_pred ceecC----eeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCc-cccCCccceeccCCCCCCCCCHHHHHHH
Q 047663 81 CKIGN----YVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEI-DVKGLHYQFLPFGTGRRGCPGLSLAMQE 155 (208)
Q Consensus 81 ~~l~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e 155 (208)
.++.+ |.||+|..|.++...+|+||++|+||+.|+|+||+++++.+. ..+.-.+.+||||+|.|.|||++||.+|
T Consensus 361 ~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~e 440 (486)
T KOG0684|consen 361 LTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLE 440 (486)
T ss_pred eeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHH
Confidence 99965 999999999999999999999999999999999997665431 1222445679999999999999999999
Q ss_pred HHHHHHHHHHhCeeEecCCCCCCCCCCCCCccCCCCCCeEEEEeecC
Q 047663 156 LPATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQDLVCVPVARC 202 (208)
Q Consensus 156 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (208)
+++++..+|+.||+++.++ .-+.++.. ..++.+..++.++.+.|.
T Consensus 441 Ik~~~~l~L~~fdleLid~-~~P~~d~s-~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 441 IKQFISLLLRHFDLELIDG-PFPEVDYS-RMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHHHHHHHHcceeecCC-CCCCCCHH-HhhcCCCCCceEEEeecC
Confidence 9999999999999999885 22233332 225567788999988875
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=4.9e-38 Score=269.37 Aligned_cols=164 Identities=21% Similarity=0.359 Sum_probs=142.8
Q ss_pred ccchhHHHHHHHHHHHHHhChH-HHHHHHHHHHHHhCC-CCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecccce
Q 047663 5 AGTDTSSTSLEWSLAELINHPM-VLQEAQQELDQVVGR-NRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCK 82 (208)
Q Consensus 5 ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d~~ 82 (208)
++++|++.+++|++++|++||+ ++++|++|++++++. +..++.+++.+|||++++++|++|++|+++...|.+.+|++
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~ 362 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFV 362 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEE
Confidence 4566667789999999999995 999999999999863 34678889999999999999999999999998899999999
Q ss_pred ec----CeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceec---------cCCCCCCCCCH
Q 047663 83 IG----NYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLP---------FGTGRRGCPGL 149 (208)
Q Consensus 83 l~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~ 149 (208)
++ |+.||+|+.|+++.+.+|+||++|+||++|+|+||++++... ...+++ ||+|+|.|+|+
T Consensus 363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~------~~~~~~f~~g~~~~~~G~G~R~C~G~ 436 (480)
T PLN02648 363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK------LLKYVFWSNGRETESPTVGNKQCAGK 436 (480)
T ss_pred EecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc------cccccccCCCcccCCCCCCCccCccH
Confidence 96 799999999999999999999999999999999998643211 122333 46788999999
Q ss_pred HHHHHHHHHHHHHHHHhCe-eEecCC
Q 047663 150 SLAMQELPATLAAMIQCFN-FKVTSP 174 (208)
Q Consensus 150 ~~A~~e~~~~l~~ll~~f~-~~~~~~ 174 (208)
+||++|++++++.|+++|+ |++.++
T Consensus 437 ~~A~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 437 DFVVLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred HHHHHHHHHHHHHHHHHhCEEeecCC
Confidence 9999999999999999998 998654
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-38 Score=265.83 Aligned_cols=144 Identities=39% Similarity=0.757 Sum_probs=136.0
Q ss_pred cccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCCCCCCCCChhHHHHHHHHhCCCCCCCCceeeecccc
Q 047663 2 FLTAGTDTSSTSLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDC 81 (208)
Q Consensus 2 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~d~ 81 (208)
+++||+|||+.+++|+++.|++||+.++++++|.+. ||+.++++|++|++|+++...|.+.+|+
T Consensus 244 ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~ 307 (411)
T COG2124 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATEDV 307 (411)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccCCE
Confidence 579999999999999999999999999999998874 6899999999999999999669999999
Q ss_pred eecCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCccccCCccceeccCCCCCCCCCHHHHHHHHHHHHH
Q 047663 82 KIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLA 161 (208)
Q Consensus 82 ~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 161 (208)
+++|+.||+|+.|.++++++||||++|++|++|+|+||. ..|+|||+|+|.|+|..||++|++++++
T Consensus 308 ~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------------~~~l~FG~G~H~ClG~~lA~~E~~~~l~ 374 (411)
T COG2124 308 ELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------------NAHLPFGGGPHRCLGAALARLELKVALA 374 (411)
T ss_pred eeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------------CCCcCCCCCCccccCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 3589999999999999999999999999
Q ss_pred HHHHhCeeEecCC
Q 047663 162 AMIQCFNFKVTSP 174 (208)
Q Consensus 162 ~ll~~f~~~~~~~ 174 (208)
.++++|++....+
T Consensus 375 ~ll~r~~~~~~~~ 387 (411)
T COG2124 375 ELLRRFPLLLLAE 387 (411)
T ss_pred HHHHhCchhhcCC
Confidence 9999999877654
No 33
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=66.25 E-value=14 Score=30.52 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCCCC---CCce-eeeccccee----cCeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCCCc
Q 047663 56 IQAIIKESLRIHPPI---PLIS-RKAVEDCKI----GNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEI 127 (208)
Q Consensus 56 l~~~i~E~lRl~~~~---~~~~-r~~~~d~~l----~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~~~ 127 (208)
-+.+++.+..+.||. |+.. ...+.|..+ -+.+|..||.|.++
T Consensus 275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------ 324 (361)
T COG1759 275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------ 324 (361)
T ss_pred HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence 345667777777753 3333 344455433 14456667655443
Q ss_pred cccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 128 DVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 128 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
+++++++-||.+ +-.|+++|. |+|.++
T Consensus 325 ---GspYs~l~~~~p--ms~GrRIA~-EIk~A~ 351 (361)
T COG1759 325 ---GSPYSNLYWGEP--MSTGRRIAR-EIKEAI 351 (361)
T ss_pred ---CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence 245666677654 789999998 777765
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=52.05 E-value=17 Score=21.83 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=17.4
Q ss_pred HHHHHHhChHHHHHHHHHHHHHh
Q 047663 17 SLAELINHPMVLQEAQQELDQVV 39 (208)
Q Consensus 17 ~~~~l~~~p~~~~~l~~ei~~~~ 39 (208)
.+.||.+||++.++|.+.-...+
T Consensus 5 iV~YLv~nPevl~kl~~g~asLI 27 (57)
T PF05952_consen 5 IVNYLVQNPEVLEKLKEGEASLI 27 (57)
T ss_pred HHHHHHHChHHHHHHHcCCeeEe
Confidence 56789999999999986433333
No 35
>PF06973 DUF1297: Domain of unknown function (DUF1297); InterPro: IPR009720 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH []. Archaea do not appear to posses PurH, however, and perform these reactions by a different mechanism []. In archaea, step i) is catalysed by the well-conserved PurP protein, while step ii) is catalysed by the PurO enzyme in some (though not all) species [, ]. This entry represents the C-terminal domain of PurP, which is homologous to the ATP-GRASP fold and thus may be involved in ATP-binding. It is almost always found in association with IPR010672 from INTERPRO.; GO: 0000287 magnesium ion binding, 0005524 ATP binding, 0016879 ligase activity, forming carbon-nitrogen bonds, 0006188 IMP biosynthetic process; PDB: 2R85_B 2R87_E 2R84_A 2R86_A 2PBZ_B 2R7L_A 2R7N_A 2R7K_A 2R7M_A.
Probab=43.34 E-value=6.7 Score=29.55 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=37.0
Q ss_pred hhHHHHHHHHhCCCCCC---CCce-eeecccceec----CeeeCCCCEEEEchhhhccCCCCCCCCCCCCCCCCCCCCCC
Q 047663 54 PYIQAIIKESLRIHPPI---PLIS-RKAVEDCKIG----NYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNS 125 (208)
Q Consensus 54 ~~l~~~i~E~lRl~~~~---~~~~-r~~~~d~~l~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf~~~~~~ 125 (208)
.+-+.+++.+.++.||. |+.. -.++.|..+- .-+|+.||.+.++
T Consensus 100 e~ge~fV~a~k~l~~PG~iGPFcLq~ivt~dle~vvfevS~RI~gGTN~~~~---------------------------- 151 (188)
T PF06973_consen 100 EMGERFVEASKELVPPGMIGPFCLQSIVTDDLEFVVFEVSARIVGGTNVYMG---------------------------- 151 (188)
T ss_dssp HHHHHHHHHHHHHSTT---EEEEEEEEE-TTSSEEEEEEESSB-GGGGGGTT----------------------------
T ss_pred HHHHHHHHHHHHhcCCCccccceEEEEEcCCceEEEEEEeccccCCCCCccC----------------------------
Confidence 35677888888888764 3333 3444454431 2345555522211
Q ss_pred CccccCCccceeccCCCCCCCCCHHHHHHHHHHHH
Q 047663 126 EIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATL 160 (208)
Q Consensus 126 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 160 (208)
+.+++++-|| ..+-.|+++| +|+|.++
T Consensus 152 -----GspYS~l~~~--~pms~GrRIA-~EIk~A~ 178 (188)
T PF06973_consen 152 -----GSPYSKLYWG--EPMSMGRRIA-REIKEAI 178 (188)
T ss_dssp -------CCHHHTTS--S---HHHHHH-HHHHHHH
T ss_pred -----CCCchHHHcC--CCcchhHHHH-HHHHHHH
Confidence 2455556665 4588999999 6777655
No 36
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.69 E-value=15 Score=21.72 Aligned_cols=11 Identities=45% Similarity=0.996 Sum_probs=9.0
Q ss_pred eccCCCCCCCC
Q 047663 137 LPFGTGRRGCP 147 (208)
Q Consensus 137 ~~Fg~G~r~C~ 147 (208)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 37999999984
No 37
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=36.79 E-value=33 Score=24.60 Aligned_cols=23 Identities=17% Similarity=0.397 Sum_probs=16.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q 047663 144 RGCPGLSLAMQELPATLAAMIQC 166 (208)
Q Consensus 144 r~C~G~~~A~~e~~~~l~~ll~~ 166 (208)
-+|.|+.||...+-.++..++..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 37999999999999999999863
No 38
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=34.14 E-value=41 Score=25.84 Aligned_cols=43 Identities=26% Similarity=0.391 Sum_probs=30.3
Q ss_pred ChhHHHHHHHHhCCCCCCCCceeeecccceecCeeeCCCCEEEE
Q 047663 53 LPYIQAIIKESLRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFV 96 (208)
Q Consensus 53 ~~~l~~~i~E~lRl~~~~~~~~r~~~~d~~l~g~~ip~g~~v~~ 96 (208)
-..+.|||.|...+.... .+.=...+|+.++|..||+|+.+..
T Consensus 52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence 445778888887664322 2222346789999999999997765
No 39
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=33.34 E-value=39 Score=22.07 Aligned_cols=20 Identities=0% Similarity=0.278 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhCeeEecCC
Q 047663 155 ELPATLAAMIQCFNFKVTSP 174 (208)
Q Consensus 155 e~~~~l~~ll~~f~~~~~~~ 174 (208)
-|+-++..+|+-|||.+.+.
T Consensus 61 ~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 61 CIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHHHHhccCCceeeec
Confidence 46788999999999998764
No 40
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=32.53 E-value=12 Score=32.04 Aligned_cols=20 Identities=45% Similarity=0.727 Sum_probs=15.3
Q ss_pred cccceecCeeeCCCCEEEEc
Q 047663 78 VEDCKIGNYVIPKDTVLFVN 97 (208)
Q Consensus 78 ~~d~~l~g~~ip~g~~v~~~ 97 (208)
.+|+.++|..||+||.|...
T Consensus 279 le~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 279 LEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred cCceeeCCEEecCCCEEEEE
Confidence 45666789999999977654
No 41
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=29.42 E-value=80 Score=20.91 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHh
Q 047663 13 SLEWSLAELINHPMVLQEAQQELDQVV 39 (208)
Q Consensus 13 ~l~~~~~~l~~~p~~~~~l~~ei~~~~ 39 (208)
++.|.++..-..|+..+.|.+||+++-
T Consensus 55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 55 TLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 456777777788999999999999864
No 42
>PF13993 YccJ: YccJ-like protein
Probab=26.65 E-value=62 Score=19.68 Aligned_cols=32 Identities=25% Similarity=0.201 Sum_probs=23.5
Q ss_pred cccchhHHHHHHHHHHHHHhChHHH-HHHHHHH
Q 047663 4 TAGTDTSSTSLEWSLAELINHPMVL-QEAQQEL 35 (208)
Q Consensus 4 ~ag~~tt~~~l~~~~~~l~~~p~~~-~~l~~ei 35 (208)
||..-.|+.-++-++++|+.+-+.. +++-+|-
T Consensus 8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWeeG 40 (69)
T PF13993_consen 8 WANVRETSIEIAEAIFELANNDEVLAEKIWEEG 40 (69)
T ss_pred HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHcc
Confidence 4555667788899999999988744 5666553
No 43
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=23.30 E-value=1.1e+02 Score=15.77 Aligned_cols=15 Identities=13% Similarity=0.437 Sum_probs=11.1
Q ss_pred ChHHHHHHHHHHHHH
Q 047663 24 HPMVLQEAQQELDQV 38 (208)
Q Consensus 24 ~p~~~~~l~~ei~~~ 38 (208)
.|.+..++|+||++.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 477778899988764
No 44
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=22.38 E-value=82 Score=16.32 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=12.0
Q ss_pred ccceeccCCCCCCCC
Q 047663 133 HYQFLPFGTGRRGCP 147 (208)
Q Consensus 133 ~~~~~~Fg~G~r~C~ 147 (208)
...|+++.+..|.|.
T Consensus 17 ~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 17 DNTYQPYDGPRRFCR 31 (31)
T ss_pred CCcEeCCCCccccCc
Confidence 456899998888884
No 45
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=20.94 E-value=80 Score=22.14 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=16.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 047663 144 RGCPGLSLAMQELPATLAAMI 164 (208)
Q Consensus 144 r~C~G~~~A~~e~~~~l~~ll 164 (208)
|.|||.-++....+.++..|=
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~ 25 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELG 25 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHT
T ss_pred CcCccHHHHHHHHHHHHHHcC
Confidence 899999999999888877763
No 46
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=20.36 E-value=70 Score=22.48 Aligned_cols=23 Identities=39% Similarity=0.361 Sum_probs=18.4
Q ss_pred eeecccceecCeeeCCCCEEEEc
Q 047663 75 RKAVEDCKIGNYVIPKDTVLFVN 97 (208)
Q Consensus 75 r~~~~d~~l~g~~ip~g~~v~~~ 97 (208)
-++..|.++.|-.||+|+.|..-
T Consensus 71 ~I~~~d~~~~g~~i~~GtWv~~~ 93 (122)
T PF14550_consen 71 YIAPEDMEIGGETIPKGTWVVGV 93 (122)
T ss_pred EecCCCcccCCeeecceEEEEEE
Confidence 45566889999999999988554
Done!