Query 047670
Match_columns 167
No_of_seqs 148 out of 1093
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 13:28:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047670.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047670hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03001 oxidoreductase, 2OG-F 100.0 2.7E-51 5.8E-56 324.2 17.3 154 12-167 66-219 (262)
2 COG3491 PcbC Isopenicillin N s 100.0 1.5E-50 3.3E-55 318.7 16.2 157 7-167 121-278 (322)
3 PLN02912 oxidoreductase, 2OG-F 100.0 4.4E-50 9.6E-55 328.7 17.8 154 12-167 147-300 (348)
4 PLN02254 gibberellin 3-beta-di 100.0 4.8E-50 1E-54 329.4 17.7 154 12-167 155-314 (358)
5 PLN02216 protein SRG1 100.0 7.2E-50 1.6E-54 328.5 18.0 154 12-167 159-314 (357)
6 PLN02639 oxidoreductase, 2OG-F 100.0 9.8E-50 2.1E-54 325.7 18.0 154 12-167 140-294 (337)
7 PLN02750 oxidoreductase, 2OG-F 100.0 1.1E-49 2.5E-54 326.2 17.7 156 9-167 141-298 (345)
8 PLN02758 oxidoreductase, 2OG-F 100.0 1.3E-49 2.9E-54 327.3 17.7 154 12-167 161-316 (361)
9 PLN02947 oxidoreductase 100.0 1E-49 2.2E-54 328.9 16.1 164 2-167 158-328 (374)
10 PLN02997 flavonol synthase 100.0 3.8E-49 8.3E-54 320.5 18.1 154 12-167 131-286 (325)
11 PLN02515 naringenin,2-oxogluta 100.0 3.8E-49 8.3E-54 324.0 17.4 154 12-167 145-300 (358)
12 PLN02904 oxidoreductase 100.0 3.6E-49 7.9E-54 324.2 17.2 153 12-167 158-311 (357)
13 PLN02276 gibberellin 20-oxidas 100.0 3.7E-49 8.1E-54 324.7 17.2 147 20-167 163-309 (361)
14 PLN03178 leucoanthocyanidin di 100.0 3.6E-49 7.9E-54 324.8 16.6 153 12-166 158-313 (360)
15 PLN02704 flavonol synthase 100.0 4.8E-49 1E-53 321.4 16.3 154 12-167 147-302 (335)
16 PLN00417 oxidoreductase, 2OG-F 100.0 1.2E-48 2.5E-53 320.3 17.9 154 12-167 152-307 (348)
17 PLN03002 oxidoreductase, 2OG-F 100.0 9.2E-49 2E-53 319.3 16.8 157 8-167 125-290 (332)
18 KOG0143 Iron/ascorbate family 100.0 1.6E-48 3.4E-53 316.2 17.6 164 1-166 109-280 (322)
19 PTZ00273 oxidase reductase; Pr 100.0 1.1E-48 2.3E-53 317.8 16.7 156 8-167 124-281 (320)
20 PLN02299 1-aminocyclopropane-1 100.0 1.2E-48 2.6E-53 317.3 15.9 154 12-167 105-262 (321)
21 PLN02156 gibberellin 2-beta-di 100.0 3.1E-48 6.6E-53 316.1 17.5 154 12-167 125-284 (335)
22 PLN02403 aminocyclopropanecarb 100.0 2.8E-48 6E-53 312.7 16.9 154 12-167 100-258 (303)
23 PLN02485 oxidoreductase 100.0 3.1E-48 6.7E-53 316.1 17.2 157 8-167 130-293 (329)
24 PLN02984 oxidoreductase, 2OG-F 100.0 2.8E-48 6E-53 317.0 16.7 148 19-167 154-304 (341)
25 PLN02393 leucoanthocyanidin di 100.0 4.5E-48 9.8E-53 318.4 17.2 154 12-167 160-317 (362)
26 PLN02365 2-oxoglutarate-depend 100.0 6.6E-47 1.4E-51 304.7 16.3 144 19-167 108-255 (300)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 100.0 3.9E-28 8.5E-33 165.2 9.1 95 63-161 2-98 (98)
28 PF13640 2OG-FeII_Oxy_3: 2OG-F 97.0 0.00069 1.5E-08 45.5 3.1 78 65-160 1-100 (100)
29 PRK05467 Fe(II)-dependent oxyg 96.1 0.1 2.3E-06 40.6 10.4 49 99-160 129-177 (226)
30 PRK15401 alpha-ketoglutarate-d 96.1 0.16 3.4E-06 39.3 11.2 79 64-157 117-210 (213)
31 smart00702 P4Hc Prolyl 4-hydro 95.7 0.19 4.1E-06 37.2 10.1 105 34-160 59-178 (178)
32 PF13532 2OG-FeII_Oxy_2: 2OG-F 93.1 1.6 3.4E-05 32.5 9.8 86 64-157 98-193 (194)
33 PF12851 Tet_JBP: Oxygenase do 92.1 0.95 2.1E-05 33.7 7.2 69 81-160 86-170 (171)
34 TIGR02466 conserved hypothetic 90.7 4.1 9E-05 31.1 9.6 40 108-159 159-198 (201)
35 TIGR00568 alkb DNA alkylation 87.5 5.5 0.00012 29.6 8.0 58 64-127 96-162 (169)
36 PF13759 2OG-FeII_Oxy_5: Putat 84.9 2 4.3E-05 28.8 4.2 38 108-157 63-100 (101)
37 PF08389 Xpo1: Exportin 1-like 43.6 51 0.0011 22.7 4.3 37 12-48 19-57 (148)
38 PF05118 Asp_Arg_Hydrox: Aspar 39.3 38 0.00082 24.7 3.1 38 119-157 116-157 (163)
39 PF11876 DUF3396: Protein of u 38.1 11 0.00025 28.9 0.2 55 85-139 104-166 (208)
40 PF01361 Tautomerase: Tautomer 36.2 56 0.0012 19.2 3.1 24 30-53 14-37 (60)
41 PF10411 DsbC_N: Disulfide bon 35.2 99 0.0021 18.3 4.2 36 96-133 19-56 (57)
42 smart00460 TGc Transglutaminas 34.2 39 0.00085 20.0 2.2 16 102-117 53-68 (68)
43 PRK02289 4-oxalocrotonate taut 33.7 58 0.0013 19.4 2.8 25 30-54 15-39 (60)
44 PRK01964 4-oxalocrotonate taut 32.2 68 0.0015 19.2 3.0 24 30-53 15-38 (64)
45 COG3695 Predicted methylated D 30.6 16 0.00034 24.9 -0.1 25 123-148 41-65 (103)
46 PRK02220 4-oxalocrotonate taut 30.3 76 0.0016 18.6 3.0 24 30-53 15-38 (61)
47 cd00491 4Oxalocrotonate_Tautom 30.2 77 0.0017 18.2 3.0 24 30-53 14-37 (58)
48 COG3128 PiuC Uncharacterized i 30.2 2.6E+02 0.0055 21.5 7.0 21 139-160 160-180 (229)
49 TIGR01565 homeo_ZF_HD homeobox 29.6 50 0.0011 20.0 2.0 38 21-58 12-53 (58)
50 PRK00745 4-oxalocrotonate taut 28.8 88 0.0019 18.4 3.1 25 30-54 15-39 (62)
51 KOG3710 EGL-Nine (EGLN) protei 28.2 2.1E+02 0.0045 22.7 5.6 65 83-159 163-237 (280)
52 PRK09943 DNA-binding transcrip 28.1 2.2E+02 0.0047 20.9 5.7 47 114-162 133-183 (185)
53 PF08066 PMC2NT: PMC2NT (NUC01 27.8 1.2E+02 0.0026 19.8 3.8 26 21-46 26-51 (91)
54 TIGR00013 taut 4-oxalocrotonat 27.4 1E+02 0.0022 18.1 3.1 23 31-53 16-38 (63)
55 PF00046 Homeobox: Homeobox do 27.3 40 0.00087 19.5 1.3 39 20-58 10-48 (57)
56 COG3145 AlkB Alkylated DNA rep 27.2 2.2E+02 0.0048 21.7 5.5 58 64-127 107-173 (194)
57 PRK01271 4-oxalocrotonate taut 26.3 89 0.0019 19.9 2.8 25 30-54 16-40 (76)
58 PF08921 DUF1904: Domain of un 25.8 91 0.002 21.3 3.0 26 30-55 12-37 (108)
59 PLN00052 prolyl 4-hydroxylase; 23.3 4.2E+02 0.0091 21.7 8.2 46 111-161 206-252 (310)
60 COG4325 Predicted membrane pro 22.6 91 0.002 26.6 2.9 38 108-145 256-293 (464)
61 COG2720 Uncharacterized vancom 22.4 3.1E+02 0.0066 23.2 5.9 42 24-72 228-269 (376)
62 PF13443 HTH_26: Cro/C1-type H 22.3 71 0.0015 18.7 1.8 32 23-54 25-57 (63)
63 PTZ00397 macrophage migration 21.4 1.2E+02 0.0027 20.4 3.1 24 30-53 72-95 (116)
64 PF14549 P22_Cro: DNA-binding 20.9 52 0.0011 20.0 0.9 12 127-138 40-51 (60)
65 PF12791 RsgI_N: Anti-sigma fa 20.7 35 0.00076 20.0 0.1 24 108-134 15-38 (56)
66 PRK10877 protein disulfide iso 20.2 2.1E+02 0.0045 22.2 4.4 62 98-162 44-118 (232)
No 1
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.7e-51 Score=324.21 Aligned_cols=154 Identities=34% Similarity=0.559 Sum_probs=144.5
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+++++|+++|.+++.+|+++++++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+|
T Consensus 66 ~wP~~-~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~l 144 (262)
T PLN03001 66 HWPDF-PPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAI 144 (262)
T ss_pred hCCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCee
Confidence 57754 46899999999999999999999999999999999999887776778999999999988889999999999999
Q ss_pred eEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+||+++||||+.+|+|++|+|.+|++||||||+||+||||+|+|++|||+.+.. ++|||++||+.|+.|+.+
T Consensus 145 TlL~qd~v~GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~-~~R~Sia~F~~p~~d~~i 219 (262)
T PLN03001 145 TLLIQDDVEGLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANAN-KARLSVATFHDPAKTAKI 219 (262)
T ss_pred EEEEeCCCCceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCC-CCEEEEEEEEcCCCCCEE
Confidence 999999999999998899999999999999999999999999999999999998876 889999999999998754
No 2
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1.5e-50 Score=318.70 Aligned_cols=157 Identities=29% Similarity=0.445 Sum_probs=150.1
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcC
Q 047670 7 RGPTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHT 86 (167)
Q Consensus 7 ~~P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~Ht 86 (167)
.+|| +|| ..| +||+++..|+++|.+++.+||++||++|++++++|++.+.++.+++|+.+||+.+..+...+.|+|+
T Consensus 121 ~gpN-~wP-~ip-~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHt 197 (322)
T COG3491 121 HGPN-LWP-AIP-GLRDALLQYYRAMTAVGLRLLRAIALGLDLPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHT 197 (322)
T ss_pred CCCC-CCc-cch-hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhccCCchheEEEEecCCCccccccccccccc
Confidence 4788 788 666 6999999999999999999999999999999999999988899999999999998888888899999
Q ss_pred CCCCeeEEeeCCCCccEEeeC-CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCC
Q 047670 87 DPGALAILLQDHHGGLQCKCG-DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRD 165 (167)
Q Consensus 87 D~~~lTll~~~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~ 165 (167)
|+|+||||+||+++||||+.+ |+|++|+|.||++|||+||+||+||||+|+||+|||+.++. ++|||++||+.|+.|+
T Consensus 198 D~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~-~~R~SipfF~~p~~Da 276 (322)
T COG3491 198 DYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPG-VDRYSIPFFLEPNFDA 276 (322)
T ss_pred CCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCC-ccceeeeeeccCCCCc
Confidence 999999999999999999999 99999999999999999999999999999999999999998 8999999999999998
Q ss_pred CC
Q 047670 166 RL 167 (167)
Q Consensus 166 ~l 167 (167)
.+
T Consensus 277 ~I 278 (322)
T COG3491 277 EI 278 (322)
T ss_pred cc
Confidence 75
No 3
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.4e-50 Score=328.72 Aligned_cols=154 Identities=37% Similarity=0.641 Sum_probs=144.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+++++|+++|.+++.+|++++|++||+++++|.+.+....+.+|++||||++.++..+|+++|||+|+|
T Consensus 147 ~wP~~-~~~fr~~~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~l 225 (348)
T PLN02912 147 EWPST-PISFREVTAEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLI 225 (348)
T ss_pred cCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCce
Confidence 46655 45799999999999999999999999999999999999888777789999999999988889999999999999
Q ss_pred eEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+||+++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. ++|||++||++|+.|+.|
T Consensus 226 TlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~-~~R~Sia~F~~p~~d~~i 300 (348)
T PLN02912 226 TVLLQDEVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTD-KERISIPTFYCPSEDAVI 300 (348)
T ss_pred EEEEECCCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCC-CCEEEEEEEecCCCCCeE
Confidence 999999999999998899999999999999999999999999999999999998876 789999999999999864
No 4
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=4.8e-50 Score=329.40 Aligned_cols=154 Identities=34% Similarity=0.537 Sum_probs=141.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcc-----cCCcceeEEeecCCCCCCCCcccccCcC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMT-----FIDGRMMIGNYYPYCPQPDLTVGIPFHT 86 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~-----~~~~~~~~~~~yp~~~~~~~~~~~~~Ht 86 (167)
.||+. |++||+++++|+++|.+++.+|+++|+++||+++++|.+.+ ..+.+.+|++|||+|++++..+|+++||
T Consensus 155 ~wP~~-~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~Ht 233 (358)
T PLN02254 155 LWPQD-HTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHT 233 (358)
T ss_pred hCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCcc
Confidence 57765 35799999999999999999999999999999988887654 3455789999999999988899999999
Q ss_pred CCCCeeEEeeCCCCccEEeeCC-eEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCC
Q 047670 87 DPGALAILLQDHHGGLQCKCGD-DWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRD 165 (167)
Q Consensus 87 D~~~lTll~~~~~~GLqv~~~g-~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~ 165 (167)
|+|+||||+||+++||||+.+| +|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||++||++|+.|+
T Consensus 234 D~g~lTiL~Qd~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~-~~R~Sia~F~~P~~d~ 312 (358)
T PLN02254 234 DSSLLTILYQSNTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKT-RHRISVAYFYGPPSDV 312 (358)
T ss_pred CCCcEEEEecCCCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCC-CCEEEEEEEecCCCCc
Confidence 9999999999999999999885 8999999999999999999999999999999999999877 8999999999999998
Q ss_pred CC
Q 047670 166 RL 167 (167)
Q Consensus 166 ~l 167 (167)
.+
T Consensus 313 ~i 314 (358)
T PLN02254 313 QI 314 (358)
T ss_pred EE
Confidence 64
No 5
>PLN02216 protein SRG1
Probab=100.00 E-value=7.2e-50 Score=328.46 Aligned_cols=154 Identities=34% Similarity=0.582 Sum_probs=143.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC-CcceeEEeecCCCCCCCCcccccCcCCCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI-DGRMMIGNYYPYCPQPDLTVGIPFHTDPGA 90 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~-~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~ 90 (167)
.||+ .|++||+++++|+++|.+++.+|+++|+++||+++++|.+.+.. ..+.+|++|||+|+.++..+|+++|||+|+
T Consensus 159 ~WP~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~ 237 (357)
T PLN02216 159 LFPK-LPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVG 237 (357)
T ss_pred hccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCce
Confidence 5775 35689999999999999999999999999999999999987765 346899999999999888999999999999
Q ss_pred eeEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 91 LAILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 91 lTll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
||||+|+ +++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||++||+.|+.|+++
T Consensus 238 lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~-~~R~Si~~F~~P~~d~~i 314 (357)
T PLN02216 238 LTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSE-KERLSVATFHNTGMGKEI 314 (357)
T ss_pred EEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCC-CCEEEEEEEecCCCCCeE
Confidence 9999994 799999998899999999999999999999999999999999999998876 899999999999999864
No 6
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.8e-50 Score=325.71 Aligned_cols=154 Identities=42% Similarity=0.674 Sum_probs=143.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+.+++|+++|.+++.+|++++|++||+++++|.+.+....+.+|++|||++++++..+|+++|||+|+|
T Consensus 140 ~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~l 218 (337)
T PLN02639 140 EWPSN-PPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNAL 218 (337)
T ss_pred hCccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCce
Confidence 47754 45799999999999999999999999999999999999888777789999999999988888999999999999
Q ss_pred eEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+|+ +++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. ++|||++||++|+.|+.|
T Consensus 219 TlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~-~~R~Sia~F~~p~~d~~i 294 (337)
T PLN02639 219 TILLQDQQVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTD-KERMSVASFLCPCDDAVI 294 (337)
T ss_pred EEEEecCCcCceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCC-CCEEEEEEEecCCCCceE
Confidence 999998 499999998899999999999999999999999999999999999998876 899999999999999864
No 7
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-49 Score=326.23 Aligned_cols=156 Identities=35% Similarity=0.571 Sum_probs=144.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 9 PTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 9 P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
|| .||+. |++||+++++|++.|.+++.+|+++||++||+++++|.+.+....+.+|++|||++++++..+|+++|||+
T Consensus 141 ~n-~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~ 218 (345)
T PLN02750 141 TN-QWPQN-PSHFRELCQEYARQVEKLAFKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDG 218 (345)
T ss_pred cc-cCCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCC
Confidence 44 56654 46899999999999999999999999999999999999988877789999999999888788999999999
Q ss_pred CCeeEEeeCCCCccEEee--CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCC
Q 047670 89 GALAILLQDHHGGLQCKC--GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDR 166 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~--~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~ 166 (167)
|+||||+||+++||||+. +|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. ++|||++||+.|+.|+.
T Consensus 219 g~lTlL~qd~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~-~~R~Si~~F~~P~~d~~ 297 (345)
T PLN02750 219 GALTVLAQDDVGGLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQ-KERFSIPFFFFPSHYVN 297 (345)
T ss_pred CeEEEEecCCCCceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCC-CCEEEEEEeecCCCCCe
Confidence 999999999999999975 589999999999999999999999999999999999998876 89999999999999986
Q ss_pred C
Q 047670 167 L 167 (167)
Q Consensus 167 l 167 (167)
|
T Consensus 298 i 298 (345)
T PLN02750 298 I 298 (345)
T ss_pred e
Confidence 4
No 8
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-49 Score=327.33 Aligned_cols=154 Identities=37% Similarity=0.593 Sum_probs=143.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+.+++|+++|.+++.+|+++|+++||+++++|.+.+....+.+|++|||+|++++..+|+++|||+|+|
T Consensus 161 ~WP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~l 239 (361)
T PLN02758 161 LWPTK-PARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSAL 239 (361)
T ss_pred cCccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCcee
Confidence 45544 35799999999999999999999999999999999999988777789999999999988889999999999999
Q ss_pred eEEeeCC--CCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQDH--HGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~~--~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+|++ ++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||++||++|+.|+.+
T Consensus 240 TlL~qd~~~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~-~~R~Sia~F~~P~~d~~i 316 (361)
T PLN02758 240 TVLQQGKGSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKE-KDRLSIVTFYAPSYEVEL 316 (361)
T ss_pred EEEEeCCCCCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCC-CCEEEEEEEecCCCCCeE
Confidence 9999984 88999999999999999999999999999999999999999999998876 899999999999999864
No 9
>PLN02947 oxidoreductase
Probab=100.00 E-value=1e-49 Score=328.95 Aligned_cols=164 Identities=35% Similarity=0.550 Sum_probs=146.2
Q ss_pred eeeEeccCCC----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---chhhhhcccCCcceeEEeecCCCC
Q 047670 2 TLVMRRGPTL----PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLA---TGRMKEMTFIDGRMMIGNYYPYCP 74 (167)
Q Consensus 2 ~l~~~~~P~~----~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~---~~~~~~~~~~~~~~~~~~~yp~~~ 74 (167)
+|.+...|.. .||+. |++||+++++|+++|.+++.+|+++|+++||++ .++|.+.+....+.+|++|||+|+
T Consensus 158 ~~~~~~~p~~~~~~~WP~~-~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p 236 (374)
T PLN02947 158 FLKLVCHPLSDVLPHWPSS-PADLRKVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACP 236 (374)
T ss_pred ceeeecCCcccccccCccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCC
Confidence 4554445532 46654 468999999999999999999999999999996 346666666667799999999999
Q ss_pred CCCCcccccCcCCCCCeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEE
Q 047670 75 QPDLTVGIPFHTDPGALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVS 154 (167)
Q Consensus 75 ~~~~~~~~~~HtD~~~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S 154 (167)
+++..+|+++|||+|+||||+|++++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||
T Consensus 237 ~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~-~~R~S 315 (374)
T PLN02947 237 EPELTLGMPPHSDYGFLTLLLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNST-KPRIS 315 (374)
T ss_pred CcccccCCCCccCCCceEEEEecCCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCC-CCEEE
Confidence 99889999999999999999999999999999999999999999999999999999999999999999998877 89999
Q ss_pred EEeeecCCCCCCC
Q 047670 155 AVVFFAPSDRDRL 167 (167)
Q Consensus 155 ~~~F~~p~~d~~l 167 (167)
++||+.|+.|+.+
T Consensus 316 ia~F~~P~~d~~i 328 (374)
T PLN02947 316 VASLHSLPFERVV 328 (374)
T ss_pred EEEEecCCCCCEE
Confidence 9999999998753
No 10
>PLN02997 flavonol synthase
Probab=100.00 E-value=3.8e-49 Score=320.47 Aligned_cols=154 Identities=30% Similarity=0.457 Sum_probs=142.2
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCC--cceeEEeecCCCCCCCCcccccCcCCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFID--GRMMIGNYYPYCPQPDLTVGIPFHTDPG 89 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~--~~~~~~~~yp~~~~~~~~~~~~~HtD~~ 89 (167)
.||+.. ++||+++++|++.|.+++.+|+++|+++||+++++|.+.+... .+.+|++|||+++.++..+|+++|||+|
T Consensus 131 ~wP~~~-~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g 209 (325)
T PLN02997 131 YWPKNP-PQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMG 209 (325)
T ss_pred cCCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcccceeeeecCCCCCCcccccCccCccCCC
Confidence 466543 4799999999999999999999999999999999998877543 3589999999999888889999999999
Q ss_pred CeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 90 ALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 90 ~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
+||||+||+++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. .+|||++||++|+.|+.|
T Consensus 210 ~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~-~~R~Si~fF~~P~~d~~i 286 (325)
T PLN02997 210 AIALLIPNEVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKE-RLRISWPVFVAPRADMSV 286 (325)
T ss_pred ceEEEecCCCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCC-CCEEEEEEEecCCCCCeE
Confidence 99999999999999999999999999999999999999999999999999999998876 789999999999999864
No 11
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=3.8e-49 Score=324.04 Aligned_cols=154 Identities=39% Similarity=0.646 Sum_probs=142.7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+++++|+++|.+++.+|+++++++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+|
T Consensus 145 ~WP~~-~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~l 223 (358)
T PLN02515 145 RWPDK-PEGWRAVTEEYSEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTI 223 (358)
T ss_pred ccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeE
Confidence 56654 35799999999999999999999999999999999999887777778999999999888889999999999999
Q ss_pred eEEeeCCCCccEEeeCC--eEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQDHHGGLQCKCGD--DWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~~~~GLqv~~~g--~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+||+++||||++++ +|++|+|.+|++|||+||+||+||||+|+|++|||+.++. .+|||++||++|+.|+.|
T Consensus 224 TlL~Qd~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~-~~R~Si~~F~~P~~d~~i 300 (358)
T PLN02515 224 TLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-CSRLSIATFQNPAPDATV 300 (358)
T ss_pred EEEecCCCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCC-CCEEEEEEEecCCCCCEE
Confidence 99999999999998863 7999999999999999999999999999999999998876 799999999999999864
No 12
>PLN02904 oxidoreductase
Probab=100.00 E-value=3.6e-49 Score=324.19 Aligned_cols=153 Identities=31% Similarity=0.500 Sum_probs=141.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCe
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGAL 91 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~l 91 (167)
.||+. |++||+++++|+++|.+++.+|+++||++||+++++|.+.+....+.+|++|||+|++++..+|+++|||+|+|
T Consensus 158 ~WP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~l 236 (357)
T PLN02904 158 LWPSN-PPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSL 236 (357)
T ss_pred cCccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCce
Confidence 46654 35799999999999999999999999999999999999887777779999999999988889999999999999
Q ss_pred eEEeeCCCCccEEeeC-CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 92 AILLQDHHGGLQCKCG-DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 92 Tll~~~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|||+|+ .+||||+.+ |+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||++||+.|+.|+.|
T Consensus 237 TlL~qd-~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~-~~R~Si~~F~~p~~d~~i 311 (357)
T PLN02904 237 TILLQS-SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKD-YKRLSFASLHSLPLHKKI 311 (357)
T ss_pred EEEecC-CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCC-CCEEEEEEeecCCCCCeE
Confidence 999996 589999985 89999999999999999999999999999999999998876 899999999999998764
No 13
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=3.7e-49 Score=324.75 Aligned_cols=147 Identities=40% Similarity=0.621 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCeeEEeeCCC
Q 047670 20 IRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGALAILLQDHH 99 (167)
Q Consensus 20 ~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~lTll~~~~~ 99 (167)
+||+.+++|+..|.+++.+||++||++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+|+++
T Consensus 163 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v 242 (361)
T PLN02276 163 QFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQV 242 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCC
Confidence 68999999999999999999999999999999999998877778999999999988888899999999999999999999
Q ss_pred CccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 100 GGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 100 ~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
+||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. ++|||++||++|+.|+.+
T Consensus 243 ~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~-~~R~Sia~F~~P~~d~~i 309 (361)
T PLN02276 243 GGLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSE-RERRSLAFFLCPKEDKVV 309 (361)
T ss_pred CceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCC-CCEEEEEEEecCCCCCEE
Confidence 9999998899999999999999999999999999999999999998876 899999999999999864
No 14
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3.6e-49 Score=324.78 Aligned_cols=153 Identities=38% Similarity=0.554 Sum_probs=141.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC---CcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI---DGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~---~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
.||+..| +||+++++|+++|.+++.+|+++||++||+++++|.+.+.. ..+.+|++|||+++.++..+|+++|||+
T Consensus 158 ~wP~~~p-~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~ 236 (360)
T PLN03178 158 LWPKTPP-DYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDV 236 (360)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCC
Confidence 5776544 69999999999999999999999999999999999987763 3468999999999988889999999999
Q ss_pred CCeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCC
Q 047670 89 GALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDR 166 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~ 166 (167)
|+||||+|++++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. .+|||++||++|+.|+.
T Consensus 237 g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~-~~R~Si~~F~~P~~d~~ 313 (360)
T PLN03178 237 SALTFILHNMVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKE-KVRISWAVFCEPPKEKI 313 (360)
T ss_pred CceEEEeeCCCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCC-CCeEEEEEEecCCcccc
Confidence 999999999999999999999999999999999999999999999999999999998776 78999999999999863
No 15
>PLN02704 flavonol synthase
Probab=100.00 E-value=4.8e-49 Score=321.40 Aligned_cols=154 Identities=36% Similarity=0.548 Sum_probs=142.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCC--cceeEEeecCCCCCCCCcccccCcCCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFID--GRMMIGNYYPYCPQPDLTVGIPFHTDPG 89 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~--~~~~~~~~yp~~~~~~~~~~~~~HtD~~ 89 (167)
.||+.. ++||+.+++|+++|.+++.+|+++++++||+++++|.+.+... .+.+|++|||++++++..+|+++|||+|
T Consensus 147 ~wP~~~-p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g 225 (335)
T PLN02704 147 FWPKNP-PSYREVNEEYAKYLRGVADKLFKTLSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMS 225 (335)
T ss_pred hCcccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCc
Confidence 577653 4799999999999999999999999999999999998876533 3579999999998888889999999999
Q ss_pred CeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 90 ALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 90 ~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
+||||+|++++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. .+|||++||++|+.|+.|
T Consensus 226 ~lTlL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~-~~R~Si~~F~~p~~d~~i 302 (335)
T PLN02704 226 AITILVPNEVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKE-KTRMSWPVFLEPPSELAV 302 (335)
T ss_pred ceEEEecCCCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCC-CCeEEEEEEecCCCCceE
Confidence 99999999999999998899999999999999999999999999999999999998876 899999999999999764
No 16
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.2e-48 Score=320.34 Aligned_cols=154 Identities=28% Similarity=0.414 Sum_probs=141.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCC-cceeEEeecCCCCCCCCcccccCcCCCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFID-GRMMIGNYYPYCPQPDLTVGIPFHTDPGA 90 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~-~~~~~~~~yp~~~~~~~~~~~~~HtD~~~ 90 (167)
.||+. |++||+++++|+++|.+++.+|++++|++||+++++|.+.+... .+.+|++|||+++.++..+|+++|||+|+
T Consensus 152 ~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~ 230 (348)
T PLN00417 152 FWPQV-PVGFRETLHEYTMKQRLVIEKFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSA 230 (348)
T ss_pred ccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCc
Confidence 46653 46899999999999999999999999999999999998877653 35799999999998888899999999999
Q ss_pred eeEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 91 LAILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 91 lTll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
||||+|+ +++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. .+|||++||++|+.|+.|
T Consensus 231 lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~-~~R~Si~fF~~P~~d~~i 307 (348)
T PLN00417 231 FTLLLPDKDVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNRE-KERISVATFCIPGADKEI 307 (348)
T ss_pred eEEEEecCCCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCC-CCEEEEEEEecCCCCcee
Confidence 9999997 699999998899999999999999999999999999999999999998876 799999999999999864
No 17
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.2e-49 Score=319.34 Aligned_cols=157 Identities=27% Similarity=0.336 Sum_probs=140.0
Q ss_pred cCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhh--cccCCcceeEEeecCCCCCCC-Cccccc
Q 047670 8 GPTLPELDE-FPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKE--MTFIDGRMMIGNYYPYCPQPD-LTVGIP 83 (167)
Q Consensus 8 ~P~~~~~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~--~~~~~~~~~~~~~yp~~~~~~-~~~~~~ 83 (167)
+|| .||+. .+++||+++++|+++|.+++..|+++||++||+++++|.+ ....+.+.+|++|||+++.++ ..+|++
T Consensus 125 ~~n-~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~ 203 (332)
T PLN03002 125 GPN-PWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACG 203 (332)
T ss_pred CCC-CCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhccccccCCCchheeeeeCCCCCCcccCccccc
Confidence 355 67764 2347999999999999999999999999999999999986 445556789999999997665 478999
Q ss_pred CcCCCCCeeEEeeCCCCccEEeeC-----CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEee
Q 047670 84 FHTDPGALAILLQDHHGGLQCKCG-----DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVF 158 (167)
Q Consensus 84 ~HtD~~~lTll~~~~~~GLqv~~~-----g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F 158 (167)
+|||+|+||||+||+++||||+.+ |+|++|+|.+|++|||+||+||+||||+|+|++|||+.++ .+|||++||
T Consensus 204 ~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~--~~R~Sia~F 281 (332)
T PLN03002 204 AHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNG--QERYSIPFF 281 (332)
T ss_pred cccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCC--CCeeEEEEE
Confidence 999999999999999999999874 5899999999999999999999999999999999999876 589999999
Q ss_pred ecCCCCCCC
Q 047670 159 FAPSDRDRL 167 (167)
Q Consensus 159 ~~p~~d~~l 167 (167)
+.|+.|+.|
T Consensus 282 ~~p~~d~~i 290 (332)
T PLN03002 282 VEPNHDCLV 290 (332)
T ss_pred ecCCCCeeE
Confidence 999999764
No 18
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=316.19 Aligned_cols=164 Identities=41% Similarity=0.651 Sum_probs=148.7
Q ss_pred CeeeEeccCCC-----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC-CcceeEEeecCCCC
Q 047670 1 DTLVMRRGPTL-----PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI-DGRMMIGNYYPYCP 74 (167)
Q Consensus 1 d~l~~~~~P~~-----~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~-~~~~~~~~~yp~~~ 74 (167)
|++++...|.. .||+ .|+.||++|++|.+++.+++.+|+++|+++||++.+++.+.+.. ....+|++|||||+
T Consensus 109 d~~~~~~~p~~~~~~~~wp~-~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~~~~~~~~r~n~Yp~cp 187 (322)
T KOG0143|consen 109 DYLTLLSAPESSFDPNLWPE-GPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFGETGGQVMRLNYYPPCP 187 (322)
T ss_pred hheeeeccCccccCcccCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhCCccceEEEEeecCCCc
Confidence 57778888852 4554 35689999999999999999999999999999987667666655 45699999999999
Q ss_pred CCCCcccccCcCCCCCeeEEeeC-CCCccEEee-CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCe
Q 047670 75 QPDLTVGIPFHTDPGALAILLQD-HHGGLQCKC-GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREAR 152 (167)
Q Consensus 75 ~~~~~~~~~~HtD~~~lTll~~~-~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R 152 (167)
+++..+|+++|||.++||+|.|| +++||||.+ +|.|++|+|.|+++|||+||+||+||||+|||+.|||+.++. ++|
T Consensus 188 ~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~-~~R 266 (322)
T KOG0143|consen 188 EPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGE-KER 266 (322)
T ss_pred CccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCC-Cce
Confidence 99999999999999999999998 899999995 899999999999999999999999999999999999999998 679
Q ss_pred EEEEeeecCCCCCC
Q 047670 153 VSAVVFFAPSDRDR 166 (167)
Q Consensus 153 ~S~~~F~~p~~d~~ 166 (167)
+|+|+|+.|..|.+
T Consensus 267 ~Sia~F~~p~~d~~ 280 (322)
T KOG0143|consen 267 ISVAFFVFPPLDKV 280 (322)
T ss_pred EEEEEEecCCCCce
Confidence 99999999999854
No 19
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1.1e-48 Score=317.76 Aligned_cols=156 Identities=27% Similarity=0.408 Sum_probs=142.2
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCC-CCcccccCcC
Q 047670 8 GPTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQP-DLTVGIPFHT 86 (167)
Q Consensus 8 ~P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~-~~~~~~~~Ht 86 (167)
+|| .||+.+| +||+++++|+++|.+++.+|++++|++||+++++|.+.+..+.+.+|++|||+++.+ +..+|+++||
T Consensus 124 ~~n-~wP~~~p-~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HT 201 (320)
T PTZ00273 124 GPN-NHPTQVE-GWMELMETHYRDMQALALVLLRALALAIGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHT 201 (320)
T ss_pred CCC-CCCCcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhCCCcceeeeeecCCCCCccccCccccccc
Confidence 355 5776544 699999999999999999999999999999999999888777789999999999764 4678999999
Q ss_pred CCCCeeEEeeCCCCccEEee-CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCC
Q 047670 87 DPGALAILLQDHHGGLQCKC-GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRD 165 (167)
Q Consensus 87 D~~~lTll~~~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~ 165 (167)
|+|+||+|+||.++||||+. +|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+. .+|||++||++|+.|+
T Consensus 202 D~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~~--~~R~Si~~F~~p~~d~ 279 (320)
T PTZ00273 202 DYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNTG--VERYSMPFFCEPNPNV 279 (320)
T ss_pred CCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCCC--CCeEEEEEEEcCCCCc
Confidence 99999999999999999997 59999999999999999999999999999999999998654 6899999999999998
Q ss_pred CC
Q 047670 166 RL 167 (167)
Q Consensus 166 ~l 167 (167)
+|
T Consensus 280 ~i 281 (320)
T PTZ00273 280 II 281 (320)
T ss_pred eE
Confidence 64
No 20
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=1.2e-48 Score=317.26 Aligned_cols=154 Identities=34% Similarity=0.601 Sum_probs=141.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC---CcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI---DGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~---~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
.||+ .|++||+.+++|+++|.+++.+|+++|+++||+++++|.+.+.. ..+.+|++|||||+.++...|+++|||+
T Consensus 105 ~wP~-~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~ 183 (321)
T PLN02299 105 DIPD-LDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDA 183 (321)
T ss_pred cCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeEecCCCCCcccccCccCccCC
Confidence 5675 35689999999999999999999999999999999999886642 3457999999999988878899999999
Q ss_pred CCeeEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 89 GALAILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 89 ~~lTll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|+||||+|+ +++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+.+.. .+|||++||++|+.|+.|
T Consensus 184 g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~-~~R~Si~~F~~p~~d~~i 262 (321)
T PLN02299 184 GGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTD-GNRMSIASFYNPGSDAVI 262 (321)
T ss_pred CeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCC-CCEEEEEEEecCCCCceE
Confidence 999999997 599999998899999999999999999999999999999999999998876 789999999999998764
No 21
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=3.1e-48 Score=316.11 Aligned_cols=154 Identities=25% Similarity=0.456 Sum_probs=138.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhhhccc--CCcceeEEeecCCCCCC--CCcccccCcC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLAT-GRMKEMTF--IDGRMMIGNYYPYCPQP--DLTVGIPFHT 86 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~-~~~~~~~~--~~~~~~~~~~yp~~~~~--~~~~~~~~Ht 86 (167)
.||+ .|++||+++++|+++|.+++.+|+++++++||+++ ++|.+++. ...+.+|++|||+|+.. +..+|+++||
T Consensus 125 ~wp~-~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HT 203 (335)
T PLN02156 125 VFRH-TPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHT 203 (335)
T ss_pred cCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcCCCccceEeEEeCCCCCCCccccccCCCCcc
Confidence 4554 35689999999999999999999999999999964 68888664 34578999999999753 2578999999
Q ss_pred CCCCeeEEeeCCCCccEEee-CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCC
Q 047670 87 DPGALAILLQDHHGGLQCKC-GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRD 165 (167)
Q Consensus 87 D~~~lTll~~~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~ 165 (167)
|+|+||||+||+++||||+. +|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+.. ++|||++||+.|+.|+
T Consensus 204 D~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~-~~R~SiafF~~P~~d~ 282 (335)
T PLN02156 204 DPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTK-RSRISMIYFAGPPLSE 282 (335)
T ss_pred CCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCC-CCEEEEEEeecCCCCC
Confidence 99999999999999999985 599999999999999999999999999999999999998876 7899999999999998
Q ss_pred CC
Q 047670 166 RL 167 (167)
Q Consensus 166 ~l 167 (167)
.+
T Consensus 283 ~i 284 (335)
T PLN02156 283 KI 284 (335)
T ss_pred EE
Confidence 64
No 22
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=2.8e-48 Score=312.67 Aligned_cols=154 Identities=32% Similarity=0.496 Sum_probs=140.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC---CcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI---DGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~---~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
.||+. |++||+++++|+++|.+++.+|+++++++||+++++|.+.+.. ....+|++|||++++++...|+++|||+
T Consensus 100 ~wP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~ 178 (303)
T PLN02403 100 EIPNL-SEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVAKYPECPRPELVRGLREHTDA 178 (303)
T ss_pred hCCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccceeeeEcCCCCCCcccccCccCccCC
Confidence 47754 4679999999999999999999999999999999999887652 3346999999999888777899999999
Q ss_pred CCeeEEeeC-CCCccEEeeCCeEEEeecCC-CeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCC
Q 047670 89 GALAILLQD-HHGGLQCKCGDDWVDVKPVP-GALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDR 166 (167)
Q Consensus 89 ~~lTll~~~-~~~GLqv~~~g~W~~v~~~~-~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~ 166 (167)
|+||+|+|+ +++||||+.+|+|++|+|.+ |++|||+||+||+||||+|+|++|||+.+.. ++|||++||++|+.|++
T Consensus 179 g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~-~~R~Si~~F~~p~~d~~ 257 (303)
T PLN02403 179 GGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKN-GSRLSIATFYNPAGDAI 257 (303)
T ss_pred CeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCC-CCEEEEEEEEcCCCCCe
Confidence 999999997 59999998889999999998 6999999999999999999999999998876 78999999999999976
Q ss_pred C
Q 047670 167 L 167 (167)
Q Consensus 167 l 167 (167)
|
T Consensus 258 i 258 (303)
T PLN02403 258 I 258 (303)
T ss_pred E
Confidence 4
No 23
>PLN02485 oxidoreductase
Probab=100.00 E-value=3.1e-48 Score=316.09 Aligned_cols=157 Identities=26% Similarity=0.377 Sum_probs=141.1
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcc-cCCcceeEEeecCCCCC----CCCcccc
Q 047670 8 GPTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMT-FIDGRMMIGNYYPYCPQ----PDLTVGI 82 (167)
Q Consensus 8 ~P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~-~~~~~~~~~~~yp~~~~----~~~~~~~ 82 (167)
+|| .||+. |++||+++++|+++|.+++.+|++++|++||+++++|.+.+ ..+.+.+|++|||+++. ++..+|+
T Consensus 130 ~~n-~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~ 207 (329)
T PLN02485 130 GPN-QWPEN-PQEFKALMEEYIKLCTDLSRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGC 207 (329)
T ss_pred CCC-CCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCccc
Confidence 466 68865 45799999999999999999999999999999988887643 44567899999999875 4567899
Q ss_pred cCcCCCCCeeEEeeC-CCCccEEee-CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 83 PFHTDPGALAILLQD-HHGGLQCKC-GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 83 ~~HtD~~~lTll~~~-~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
++|||+|+||||+|+ +++||||+. +|+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. .+|||++||++
T Consensus 208 ~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~-~~R~Si~~F~~ 286 (329)
T PLN02485 208 GAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSP-KYRVCVAFFYE 286 (329)
T ss_pred ccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCC-CCeEEEEEEec
Confidence 999999999999997 589999996 499999999999999999999999999999999999998876 79999999999
Q ss_pred CCCCCCC
Q 047670 161 PSDRDRL 167 (167)
Q Consensus 161 p~~d~~l 167 (167)
|+.|++|
T Consensus 287 p~~d~~i 293 (329)
T PLN02485 287 TNFDAAV 293 (329)
T ss_pred CCCCcee
Confidence 9999864
No 24
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.8e-48 Score=317.01 Aligned_cols=148 Identities=30% Similarity=0.479 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--chhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCeeEEee
Q 047670 19 EIRRREALEWSQHVKQLGELLMGLLCEGLGLA--TGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGALAILLQ 96 (167)
Q Consensus 19 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~--~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~lTll~~ 96 (167)
++||+++++|+++|.+++.+|+++||++||++ +++|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+|
T Consensus 154 p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Q 233 (341)
T PLN02984 154 ESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQ 233 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEe
Confidence 47999999999999999999999999999999 8999888877778999999999988777899999999999999999
Q ss_pred CCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeec-CCCCCCeEEEEeeecCCCCCCC
Q 047670 97 DHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALA-NSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 97 ~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~-~~~~~~R~S~~~F~~p~~d~~l 167 (167)
++++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+. +.. ++|||++||++|+.|+.+
T Consensus 234 d~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~-~~R~Sia~F~~P~~d~~i 304 (341)
T PLN02984 234 DEVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKK-KERYSICYFVFPEEDCVI 304 (341)
T ss_pred CCCCCeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCC-CCeEEEEEEecCCCCCEE
Confidence 9999999998899999999999999999999999999999999999964 444 789999999999999864
No 25
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=4.5e-48 Score=318.43 Aligned_cols=154 Identities=42% Similarity=0.687 Sum_probs=141.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCC---cceeEEeecCCCCCCCCcccccCcCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFID---GRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~---~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
.||+. |++||+++++|+++|.+++.+|+++++++||+++++|.+.+... .+.+|++|||++++++..+|+++|||+
T Consensus 160 ~wP~~-~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~ 238 (362)
T PLN02393 160 KWPSL-PPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDP 238 (362)
T ss_pred hCccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCC
Confidence 57754 46899999999999999999999999999999999998876543 368999999999988888999999999
Q ss_pred CCeeEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 89 GALAILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 89 ~~lTll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
|+||||+|+ +++||||+.+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+.. ++|||++||++|+.|+.|
T Consensus 239 g~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~-~~R~SiafF~~P~~d~~i 317 (362)
T PLN02393 239 GGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSA-KERVSLAFFYNPKSDLPI 317 (362)
T ss_pred ceEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCC-CCEEEEEEEecCCCCceE
Confidence 999999985 689999998899999999999999999999999999999999999998876 899999999999999864
No 26
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=6.6e-47 Score=304.74 Aligned_cols=144 Identities=28% Similarity=0.450 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCCCeeEEeeC
Q 047670 19 EIRRREALEWSQHVKQLGELLMGLLCEGLGL-ATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPGALAILLQD 97 (167)
Q Consensus 19 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~-~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~~lTll~~~ 97 (167)
++||+.+++|+++|.+++.+|+++|+++||+ ++++|++. .+.+|++|||+++.++...|+++|||+|+||||+|+
T Consensus 108 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd 183 (300)
T PLN02365 108 PHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDD 183 (300)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc----ccceeeeecCCCCCccccccccCccCCCceEEEecC
Confidence 5799999999999999999999999999999 77788764 368999999999888888999999999999999998
Q ss_pred -CCCccEEeeC--CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCCCC
Q 047670 98 -HHGGLQCKCG--DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 98 -~~~GLqv~~~--g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~~l 167 (167)
+++||||+++ |+|++|+|.+|++|||+||+||+||||+|+|++|||+.++. .+|||++||+.|+.|+.+
T Consensus 184 ~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~-~~R~Si~~F~~p~~d~~i 255 (300)
T PLN02365 184 ENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEA-TMRISIASFLLGPKDDDV 255 (300)
T ss_pred CCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCC-CCEEEEEEEecCCCCCeE
Confidence 4999999874 89999999999999999999999999999999999998876 789999999999999754
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.95 E-value=3.9e-28 Score=165.24 Aligned_cols=95 Identities=42% Similarity=0.715 Sum_probs=76.5
Q ss_pred ceeEEeecCCCCCCCCcccccCcCCC--CCeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeeccc
Q 047670 63 RMMIGNYYPYCPQPDLTVGIPFHTDP--GALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMD 140 (167)
Q Consensus 63 ~~~~~~~yp~~~~~~~~~~~~~HtD~--~~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~ 140 (167)
..+++++||+ ++...++++|+|. +++|+++|++.+||||..+++|+.|++.++.++||+||+|++||||.++|+.
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 4689999998 6668899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCCCCeEEEEeeecC
Q 047670 141 HRALANSFREARVSAVVFFAP 161 (167)
Q Consensus 141 HRV~~~~~~~~R~S~~~F~~p 161 (167)
|||+.+.. ..|+|++||++|
T Consensus 79 HrV~~~~~-~~R~s~~~f~~p 98 (98)
T PF03171_consen 79 HRVVPPTE-GERYSLTFFLRP 98 (98)
T ss_dssp EEEE--ST-S-EEEEEEEEE-
T ss_pred eeeEcCCC-CCEEEEEEEECC
Confidence 99999986 899999999998
No 28
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=97.00 E-value=0.00069 Score=45.46 Aligned_cols=78 Identities=29% Similarity=0.264 Sum_probs=52.0
Q ss_pred eEEeecCCCCCCCCcccccCcCCC-----CCeeEEee--CC-----CCccEEee----CCeEEEee-----cCCCeEEEE
Q 047670 65 MIGNYYPYCPQPDLTVGIPFHTDP-----GALAILLQ--DH-----HGGLQCKC----GDDWVDVK-----PVPGALVVD 123 (167)
Q Consensus 65 ~~~~~yp~~~~~~~~~~~~~HtD~-----~~lTll~~--~~-----~~GLqv~~----~g~W~~v~-----~~~~~~vvn 123 (167)
+++++|++ .-...+|+|. ..+|+++. +. .+.|++.. ++....+. |.+|.+|+.
T Consensus 1 ~~~~~y~~------G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPP------GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEET------TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECc------CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 45677755 2347899998 48888843 22 25577774 34455555 899988887
Q ss_pred cchhhHHhhCCeeecccceeecC-CCCCCeEEEEeeec
Q 047670 124 IGDVFQILSNDEYKSMDHRALAN-SFREARVSAVVFFA 160 (167)
Q Consensus 124 ~Gd~le~~SnG~~~s~~HRV~~~-~~~~~R~S~~~F~~ 160 (167)
-+ ...+|+|... .. ..|+++.+|+.
T Consensus 75 ~~-----------~~~~H~v~~v~~~-~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEG-GRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EE-SEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCC-CCEEEEEEEEC
Confidence 65 5579999887 44 89999999874
No 29
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=96.13 E-value=0.1 Score=40.64 Aligned_cols=49 Identities=22% Similarity=0.158 Sum_probs=36.1
Q ss_pred CCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 99 HGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 99 ~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
.+.|.+....+=..|.|..|.+|+.-. +.+|+|..-.. ..|+++.+..+
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps------------~~lH~v~pVt~-G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPS------------TSLHRVTPVTR-GVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECC------------CCceeeeeccC-ccEEEEEecHH
Confidence 455888765333688898888888764 37899987555 68999988764
No 30
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=96.11 E-value=0.16 Score=39.30 Aligned_cols=79 Identities=18% Similarity=0.119 Sum_probs=47.0
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCC-----CeeEEeeCCCCccE-Ee---eCCeEEEeecCCCeEEEEcchhhHHhhCC
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPG-----ALAILLQDHHGGLQ-CK---CGDDWVDVKPVPGALVVDIGDVFQILSND 134 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~-----~lTll~~~~~~GLq-v~---~~g~W~~v~~~~~~~vvn~Gd~le~~SnG 134 (167)
...+|+|.+. . ++++|.|-. ..-+-.+-+.+... +. ..+.+.++...+|.++|.-|++ +.|=
T Consensus 117 a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~~-- 187 (213)
T PRK15401 117 ACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLRY-- 187 (213)
T ss_pred EEEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhee--
Confidence 4668999863 2 689999942 11111111222222 22 1256899999999999999985 4332
Q ss_pred eeecccceeecCC------CCCCeEEEEe
Q 047670 135 EYKSMDHRALANS------FREARVSAVV 157 (167)
Q Consensus 135 ~~~s~~HRV~~~~------~~~~R~S~~~ 157 (167)
|.|.... .+..|+|+.|
T Consensus 188 ------HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 188 ------HGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred ------ccCCcCCCCcCCCCCCCeEEEEe
Confidence 4442221 1247999887
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.74 E-value=0.19 Score=37.18 Aligned_cols=105 Identities=22% Similarity=0.111 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCC--------CeeEEee--C-CCCc-
Q 047670 34 QLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPG--------ALAILLQ--D-HHGG- 101 (167)
Q Consensus 34 ~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~--------~lTll~~--~-~~~G- 101 (167)
.+...|.+.++..++.+.. .......+.+.+|.+. -...+|.|.. .+|+++. + ..+|
T Consensus 59 ~~~~~l~~~i~~~~~~~~~-----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~ 127 (178)
T smart00702 59 LVIERIRQRLADFLGLLRG-----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGE 127 (178)
T ss_pred HHHHHHHHHHHHHHCCCch-----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCce
Confidence 4566666777777766421 1122335778888762 2367899865 5777765 2 2333
Q ss_pred cEEeeCCe--EEEeecCCCeEEEEc-chhhHHhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 102 LQCKCGDD--WVDVKPVPGALVVDI-GDVFQILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 102 Lqv~~~g~--W~~v~~~~~~~vvn~-Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
|.+...+. -..|.|..|.+++.- ++ +...|.|..... ..|+++..+++
T Consensus 128 ~~f~~~~~~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~pv~~-G~r~~~~~W~~ 178 (178)
T smart00702 128 LVFPGLGLMVCATVKPKKGDLLFFPSGR----------GRSLHGVCPVTR-GSRWAITGWIR 178 (178)
T ss_pred EEecCCCCccceEEeCCCCcEEEEeCCC----------CCccccCCccee-CCEEEEEEEEC
Confidence 66665543 668899988877754 32 167899987765 68999988763
No 32
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=93.15 E-value=1.6 Score=32.51 Aligned_cols=86 Identities=20% Similarity=0.189 Sum_probs=44.2
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCCCe---eEEee--CCCC-ccEEeeC---CeEEEeecCCCeEEEEcchhhHHhhCC
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPGAL---AILLQ--DHHG-GLQCKCG---DDWVDVKPVPGALVVDIGDVFQILSND 134 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~~l---Tll~~--~~~~-GLqv~~~---g~W~~v~~~~~~~vvn~Gd~le~~SnG 134 (167)
...+|+|++ .. ++++|.|...+ ..+.. -+.. =+.+... +....+...+|+++|+-|++=..| .+
T Consensus 98 ~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~-H~ 170 (194)
T PF13532_consen 98 QCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW-HG 170 (194)
T ss_dssp EEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-EE
T ss_pred EEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-eE
Confidence 466899987 23 79999997643 22221 1122 2344443 689999999999999999886555 43
Q ss_pred eeecccceeecC-CCCCCeEEEEe
Q 047670 135 EYKSMDHRALAN-SFREARVSAVV 157 (167)
Q Consensus 135 ~~~s~~HRV~~~-~~~~~R~S~~~ 157 (167)
.-+... ..... .....|+|+.|
T Consensus 171 I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 171 IPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp E-S-SC-EEEESTEE-S-EEEEEE
T ss_pred cccccC-CccccccCCCCEEEEEe
Confidence 222111 10000 00147999876
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=92.05 E-value=0.95 Score=33.70 Aligned_cols=69 Identities=19% Similarity=0.093 Sum_probs=44.8
Q ss_pred cccCcCCC----CCeeEEeeC----CCCccEEeeC----CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecC--
Q 047670 81 GIPFHTDP----GALAILLQD----HHGGLQCKCG----DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALAN-- 146 (167)
Q Consensus 81 ~~~~HtD~----~~lTll~~~----~~~GLqv~~~----g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~-- 146 (167)
....|+|. ..+|++..- ..+|+.+... ..=+.|.+.+|++++..|..+ .|-|..-
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv~~ 154 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-----------LHGVTPVES 154 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-----------eeecCcccC
Confidence 46789998 777777763 2345544433 134678889999999988433 3443221
Q ss_pred --CCCCCeEEEEeeec
Q 047670 147 --SFREARVSAVVFFA 160 (167)
Q Consensus 147 --~~~~~R~S~~~F~~ 160 (167)
.....|+|++||.+
T Consensus 155 ~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 155 PNRNHGTRISLVFYQH 170 (171)
T ss_pred CCCCCCeEEEEEEEeE
Confidence 11368999999975
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=90.72 E-value=4.1 Score=31.15 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=32.4
Q ss_pred CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeee
Q 047670 108 DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFF 159 (167)
Q Consensus 108 g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~ 159 (167)
..|+.+.|.+|.+|+.=+. -.|+|..+..+.+|+|++|=+
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 4688899999999887663 379999887668999999854
No 35
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=87.45 E-value=5.5 Score=29.60 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=36.1
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCCCee---EEee--CCCCccEEee----CCeEEEeecCCCeEEEEcchh
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPGALA---ILLQ--DHHGGLQCKC----GDDWVDVKPVPGALVVDIGDV 127 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~~lT---ll~~--~~~~GLqv~~----~g~W~~v~~~~~~~vvn~Gd~ 127 (167)
...+|+|++. -++++|.|-.-+. .+.+ -+.+...... ++...++...+|+++|+-|+.
T Consensus 96 ~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 4668999874 2589999953321 1111 1222222221 245889999999999999874
No 36
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=84.90 E-value=2 Score=28.77 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=24.0
Q ss_pred CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEe
Q 047670 108 DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVV 157 (167)
Q Consensus 108 g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~ 157 (167)
..+..++|.+|.++|.=+. ..|+|.....+.+|+|++|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 5688899999999998773 3799988876579999997
No 37
>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane. Active transport of large molecules through these pore complexes require carrier proteins, called karyopherins (importins and exportins), which shuttle between the two compartments. This domain is found close to the N terminus of yeast exportin 1 (Xpo1, Crm1, P14068 from SWISSPROT), as well as adjacent to the N-terminal domain of importin-beta (IPR001494 from INTERPRO). Exportin 1 is a nuclear export receptor that translocates proteins out of the nucleus; it interacts with leucine-rich nuclear export signal (NES) sequences in proteins to be transported, as well as with RanGTP [, ]. Importin-beta is a nuclear import receptor that translocates proteins into the nucleus; it interacts with RanGTP and importin-alpha, the latter binding with the nuclear localisation signal (NLS) sequences in proteins to be transported []. More information about these proteins can be found at Protein of the Month: Importins [].; PDB: 3IBV_A 3ICQ_U 3M1I_C 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D 2XWU_B 2X19_B ....
Probab=43.61 E-value=51 Score=22.69 Aligned_cols=37 Identities=11% Similarity=0.063 Sum_probs=22.7
Q ss_pred CCCCCCcHHHHHHHHHHHH--HHHHHHHHHHHHHHHhcC
Q 047670 12 PELDEFPEIRRREALEWSQ--HVKQLGELLMGLLCEGLG 48 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~--~~~~l~~~ll~~l~~~lg 48 (167)
.||+.||.-+.+.+..... .-..+...+++.+.+-+.
T Consensus 19 ~~P~~Wp~~l~~l~~~~~~~~~~~~~~L~iL~~l~eEi~ 57 (148)
T PF08389_consen 19 DWPQQWPDFLEDLLQLLQSSPQHLELVLRILRILPEEIT 57 (148)
T ss_dssp HTTTTSTTHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HChhhCchHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Confidence 4778888644444443333 344567778888877664
No 38
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=39.32 E-value=38 Score=24.73 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=24.0
Q ss_pred eEEEEcchhhHHhhCCee----ecccceeecCCCCCCeEEEEe
Q 047670 119 ALVVDIGDVFQILSNDEY----KSMDHRALANSFREARVSAVV 157 (167)
Q Consensus 119 ~~vvn~Gd~le~~SnG~~----~s~~HRV~~~~~~~~R~S~~~ 157 (167)
...+.+|+.--.|..|.. -|-.|.|.+.+. .+|+.+.+
T Consensus 116 ~~~~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~-~~Rv~L~v 157 (163)
T PF05118_consen 116 GCYIRVGGETRHWREGECWVFDDSFEHEVWNNGD-EDRVVLIV 157 (163)
T ss_dssp TEEEEETTEEEB--CTEEEEE-TTS-EEEEESSS-S-EEEEEE
T ss_pred CeEEEECCeEEEeccCcEEEEeCCEEEEEEeCCC-CCEEEEEE
Confidence 345556666667777754 366899999887 89998765
No 39
>PF11876 DUF3396: Protein of unknown function (DUF3396); InterPro: IPR021815 This family of proteins are functionally uncharacterised. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.
Probab=38.14 E-value=11 Score=28.86 Aligned_cols=55 Identities=16% Similarity=0.271 Sum_probs=38.8
Q ss_pred cCCCCCeeEEeeC---CCCccEEee---CCeEEEeecCCCeEEEEcchh--hHHhhCCeeecc
Q 047670 85 HTDPGALAILLQD---HHGGLQCKC---GDDWVDVKPVPGALVVDIGDV--FQILSNDEYKSM 139 (167)
Q Consensus 85 HtD~~~lTll~~~---~~~GLqv~~---~g~W~~v~~~~~~~vvn~Gd~--le~~SnG~~~s~ 139 (167)
=...+.+|+|-+. ..+|.+... ++.|+.+.+-++.+||.+|+. +--...|.....
T Consensus 104 Ik~v~WlT~Lg~~~l~~LGG~~~lr~~L~~~~~~i~~~~~g~vI~aG~~P~lGd~~~~~~P~~ 166 (208)
T PF11876_consen 104 IKGVNWLTFLGDPLLEKLGGEDALRSALPGPWIRIHPYGGGVVIQAGEWPELGDTEEGGVPPA 166 (208)
T ss_pred CCCcchhheeCHHHHHhhccHHHHHhhCCCCceEEEECCCcEEEEeCCCCCCcCcCCCCCcHH
Confidence 3457899999874 577776432 489999999999999999985 223344434443
No 40
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=36.25 E-value=56 Score=19.17 Aligned_cols=24 Identities=25% Similarity=0.465 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
++-.+++.+|..++.+.+|.+++.
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~ 37 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPER 37 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCe
Confidence 355788999999999999998754
No 41
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=35.23 E-value=99 Score=18.31 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=22.3
Q ss_pred eCCCCcc-EEee-CCeEEEeecCCCeEEEEcchhhHHhhC
Q 047670 96 QDHHGGL-QCKC-GDDWVDVKPVPGALVVDIGDVFQILSN 133 (167)
Q Consensus 96 ~~~~~GL-qv~~-~g~W~~v~~~~~~~vvn~Gd~le~~Sn 133 (167)
....+|| ||.. +|+-..+.+....+++ |++++..++
T Consensus 19 ~spi~GlyeV~~~~~~i~Y~~~dg~yli~--G~l~d~~~~ 56 (57)
T PF10411_consen 19 PSPIPGLYEVVLKGGGILYVDEDGRYLIQ--GQLYDLKTK 56 (57)
T ss_dssp E-SSTTEEEEEE-TTEEEEEETTSSEEEE--S-EEE-TTT
T ss_pred cCCCCCeEEEEECCCeEEEEcCCCCEEEE--eEEEecCCC
Confidence 3467786 5776 6777777776665554 888876654
No 42
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=34.19 E-value=39 Score=20.04 Aligned_cols=16 Identities=31% Similarity=0.673 Sum_probs=12.6
Q ss_pred cEEeeCCeEEEeecCC
Q 047670 102 LQCKCGDDWVDVKPVP 117 (167)
Q Consensus 102 Lqv~~~g~W~~v~~~~ 117 (167)
+||+.+++|+.+.|.+
T Consensus 53 ~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 53 AEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEECCCeEEEeCCC
Confidence 6777789999988753
No 43
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=33.70 E-value=58 Score=19.35 Aligned_cols=25 Identities=4% Similarity=0.028 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
++-++++..|.+++++.+|.+++.+
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v 39 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAI 39 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 3456889999999999999986543
No 44
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=32.19 E-value=68 Score=19.17 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
++-.++...|.+++++.+|.+++.
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~ 38 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKER 38 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhh
Confidence 345688888999999999998754
No 45
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=30.56 E-value=16 Score=24.91 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=19.0
Q ss_pred EcchhhHHhhCCeeecccceeecCCC
Q 047670 123 DIGDVFQILSNDEYKSMDHRALANSF 148 (167)
Q Consensus 123 n~Gd~le~~SnG~~~s~~HRV~~~~~ 148 (167)
++|-.|..++.|..- ..|||++..+
T Consensus 41 qVG~il~~l~~~s~l-PWhRVvns~G 65 (103)
T COG3695 41 QVGRILKHLPEGSDL-PWHRVVNSDG 65 (103)
T ss_pred HHHHHHhhCCCCCCC-ChhheecCCC
Confidence 478888888877543 5899998764
No 46
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=30.32 E-value=76 Score=18.58 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
++-.+++..|.+.+++.+|.+++.
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~ 38 (61)
T PRK02220 15 EQLKALVKDVTAAVSKNTGAPAEH 38 (61)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhh
Confidence 345688889999999999998654
No 47
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=30.24 E-value=77 Score=18.21 Aligned_cols=24 Identities=21% Similarity=0.232 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
++-++++..|.+++++.+|.+++.
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~ 37 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEAT 37 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 455688888999999999998653
No 48
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=30.17 E-value=2.6e+02 Score=21.53 Aligned_cols=21 Identities=10% Similarity=0.113 Sum_probs=15.7
Q ss_pred ccceeecCCCCCCeEEEEeeec
Q 047670 139 MDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 139 ~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
++|+|..... .+|+...|+++
T Consensus 160 SlH~VtPVTR-g~R~asffW~q 180 (229)
T COG3128 160 SLHEVTPVTR-GERFASFFWIQ 180 (229)
T ss_pred cceecccccc-CceEEEeeehH
Confidence 4899977665 68998777654
No 49
>TIGR01565 homeo_ZF_HD homeobox domain, ZF-HD class. This model represents a class of homoebox domain that differs substantially from the typical homoebox domain described in pfam model pfam00046. It is found in both C4 and C3 plants.
Probab=29.59 E-value=50 Score=20.01 Aligned_cols=38 Identities=11% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHhcCCCchhhhhcc
Q 047670 21 RRREALEWSQHVKQ----LGELLMGLLCEGLGLATGRMKEMT 58 (167)
Q Consensus 21 fr~~~~~y~~~~~~----l~~~ll~~l~~~lg~~~~~~~~~~ 58 (167)
=.+.|+++++...- ........+|..+|+++..+.-.+
T Consensus 12 Q~~~Le~~fe~~~y~~~~~~~~~r~~la~~lgl~~~vvKVWf 53 (58)
T TIGR01565 12 QKEKMRDFAEKLGWKLKDKRREEVREFCEEIGVTRKVFKVWM 53 (58)
T ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhCCCHHHeeeec
Confidence 35667777776654 777788899999999977665444
No 50
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=28.81 E-value=88 Score=18.36 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
++-.+++..|.+++.+.+|.+++.+
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~v 39 (62)
T PRK00745 15 EQKRKLVEEITRVTVETLGCPPESV 39 (62)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHE
Confidence 3456888899999999999987543
No 51
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=28.24 E-value=2.1e+02 Score=22.75 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=45.5
Q ss_pred cCcCCCCCeeEEee---C-----CCCccEEeeCC--eEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCe
Q 047670 83 PFHTDPGALAILLQ---D-----HHGGLQCKCGD--DWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREAR 152 (167)
Q Consensus 83 ~~HtD~~~lTll~~---~-----~~~GLqv~~~g--~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R 152 (167)
.||-|.-+||-++- + ..++|++.-.| ...+++|.-|-+++...| +..+|.|...- ..|
T Consensus 163 NP~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~~~adieP~fdrLlffwSd----------rrnPhev~Pa~--~tr 230 (280)
T KOG3710|consen 163 NPHGDGRCITCIYYLNQNWDVKVHGGILRIFPEGSTTFADIEPKFDRLLFFWSD----------RRNPHEVQPAY--ATR 230 (280)
T ss_pred CCCCCceEEEEEEEcccCcceeeccceeEeccCCCCcccccCcCCCeEEEEEec----------CCCcccccccc--ccc
Confidence 78999999998874 2 13557777663 477788888888886544 35678876654 467
Q ss_pred EEEEeee
Q 047670 153 VSAVVFF 159 (167)
Q Consensus 153 ~S~~~F~ 159 (167)
|.+...+
T Consensus 231 yaitvwy 237 (280)
T KOG3710|consen 231 YAITVWY 237 (280)
T ss_pred eEEEEEE
Confidence 7776554
No 52
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=28.14 E-value=2.2e+02 Score=20.89 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=26.0
Q ss_pred ecCCCeEEEEcchhhHHhhCC---eeec-ccceeecCCCCCCeEEEEeeecCC
Q 047670 114 KPVPGALVVDIGDVFQILSND---EYKS-MDHRALANSFREARVSAVVFFAPS 162 (167)
Q Consensus 114 ~~~~~~~vvn~Gd~le~~SnG---~~~s-~~HRV~~~~~~~~R~S~~~F~~p~ 162 (167)
-...|.+.+.+|+.--.+.-| .|+| +.|+..++++ +...+..+..|.
T Consensus 133 ~Vl~G~~~~~~~~~~~~l~~Gd~~~~~~~~~H~~~n~~~--~~~~~l~~~~p~ 183 (185)
T PRK09943 133 TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSA--GICRIISAHTPT 183 (185)
T ss_pred EEEEeEEEEEECCEEEEecCCCEEEEcCCCCeeeeCCCC--CCeEEEEEeCCC
Confidence 345555556565544444444 3455 6899888664 444444444553
No 53
>PF08066 PMC2NT: PMC2NT (NUC016) domain; InterPro: IPR012588 Exosomes are nano-compartments that function in the degradation or processing of RNA (including mRNA, rRNA, snRNA and snoRNA) [, ]. Exosomes occur in both archaea and eukaryotes, and have a similar overall structure to each other and to bacterial/organelle PNPases (polynucleotide phosphorylases; 2.7.7.8 from EC) [], consisting of a barrel structure composed of a hexameric ring of PH domains that act as a degradation chamber, and an S1-domain/KH-domain containing cap that binds the RNA substrate (and sometimes accessory proteins) in order to regulate and restrict entry into the degradation chamber []. There are two types of exosomes in eukaryotes, cytoplasmic exosomes that are responsible for 3'-5' exoribonuclease degradation of mRNAs, and nuclear exosomes that degrade pre-mRNAs (such as nonsense transcripts) and degrade rRNAs, snRNAs and snoRNAs. Unstructured RNA substrates feed in through the pore made by the S1 domains, are degraded by the PH domain ring, and exit as nucleotides via the PH pore at the opposite end of the barrel [, ]. There are several accessory proteins that help degrade, unwind or polyadenylate RNA substrate before they enter the exosome. This entry represents the N-terminal domain of Rrp6 (exosome component 10 in humans), a nuclear exosome accessory factor that interacts with the bottom of the hexameric PH-ring opposite the cap. Rrp6 functions as a hydrolytic exonuclease, and is homologous to RNase-D in Escherichia coli. More information about these proteins can be found at Protein of the Month: RNA Exosomes [].; GO: 0006396 RNA processing, 0000176 nuclear exosome (RNase complex)
Probab=27.77 E-value=1.2e+02 Score=19.84 Aligned_cols=26 Identities=19% Similarity=-0.052 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047670 21 RRREALEWSQHVKQLGELLMGLLCEG 46 (167)
Q Consensus 21 fr~~~~~y~~~~~~l~~~ll~~l~~~ 46 (167)
|++.+.+..+.+..+...|++.+...
T Consensus 26 f~~~ld~~s~rll~l~n~ll~~~~~~ 51 (91)
T PF08066_consen 26 FAESLDEQSQRLLSLINSLLKSAGSK 51 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555555555555555555544443
No 54
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=27.38 E-value=1e+02 Score=18.15 Aligned_cols=23 Identities=26% Similarity=0.225 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++++.+|.+++.
T Consensus 16 qK~~l~~~it~~l~~~lg~~~~~ 38 (63)
T TIGR00013 16 QKRQLIEGVTEAMAETLGANLES 38 (63)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 44678888999999999998653
No 55
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=27.27 E-value=40 Score=19.48 Aligned_cols=39 Identities=18% Similarity=0.073 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcc
Q 047670 20 IRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMT 58 (167)
Q Consensus 20 ~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~ 58 (167)
.=...++++++........-...||..+|++...+..+|
T Consensus 10 ~q~~~L~~~f~~~~~p~~~~~~~la~~l~l~~~~V~~WF 48 (57)
T PF00046_consen 10 EQLKVLEEYFQENPYPSKEEREELAKELGLTERQVKNWF 48 (57)
T ss_dssp HHHHHHHHHHHHSSSCHHHHHHHHHHHHTSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccccccccccccccccccccCH
Confidence 446788888888777888888999999999977655443
No 56
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=27.18 E-value=2.2e+02 Score=21.71 Aligned_cols=58 Identities=16% Similarity=0.036 Sum_probs=35.0
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCCC--ee-EEe--eCCCCccEEee----CCeEEEeecCCCeEEEEcchh
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPGA--LA-ILL--QDHHGGLQCKC----GDDWVDVKPVPGALVVDIGDV 127 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~~--lT-ll~--~~~~~GLqv~~----~g~W~~v~~~~~~~vvn~Gd~ 127 (167)
...+|+|.+. -++++|.|-.- .+ .+. +-......... .|.+.++...+|.++|.-|..
T Consensus 107 a~Lvn~Y~pG------d~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~~r~~~~~~~~L~~Gdvvvm~G~~ 173 (194)
T COG3145 107 AVLVNRYRPG------ASIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGRRRRGPGLRLRLEHGDVVVMGGPS 173 (194)
T ss_pred heeEEeccCC------CccccccccccccCCCceEEEecCCCeEEEeccccCCCCceeEEecCCCEEEecCCc
Confidence 3567888763 34788887541 11 111 11233333322 267999999999999998854
No 57
>PRK01271 4-oxalocrotonate tautomerase; Provisional
Probab=26.27 E-value=89 Score=19.94 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
++-.+++..|.+++++.||.+++..
T Consensus 16 EqK~~La~~iT~a~~~~lg~~~e~v 40 (76)
T PRK01271 16 EQKAALAADITDVIIRHLNSKDSSI 40 (76)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 3456889999999999999987643
No 58
>PF08921 DUF1904: Domain of unknown function (DUF1904); InterPro: IPR015017 This entry represents a family of hypothetical bacterial proteins. ; PDB: 1U9D_B.
Probab=25.77 E-value=91 Score=21.34 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhhh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGRMK 55 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~~~ 55 (167)
+.+.+++..|+.-||+.++.+++.|.
T Consensus 12 e~v~~~S~~LideLa~i~~~p~e~ft 37 (108)
T PF08921_consen 12 EQVQELSKELIDELAEICGCPRENFT 37 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHT--GGG-E
T ss_pred HHHHHHhHHHHHHHHHHHCCCcceEE
Confidence 46788999999999999999988764
No 59
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=23.30 E-value=4.2e+02 Score=21.70 Aligned_cols=46 Identities=20% Similarity=0.096 Sum_probs=25.6
Q ss_pred EEeecCCCeEEEEcchhhHHhhCCe-eecccceeecCCCCCCeEEEEeeecC
Q 047670 111 VDVKPVPGALVVDIGDVFQILSNDE-YKSMDHRALANSFREARVSAVVFFAP 161 (167)
Q Consensus 111 ~~v~~~~~~~vvn~Gd~le~~SnG~-~~s~~HRV~~~~~~~~R~S~~~F~~p 161 (167)
+.|.|..|..|+.-= ...||. =+.++|.....-. .+++++...++-
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~-G~Kw~atkWi~~ 252 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIE-GEKWSAPKWIHI 252 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeec-CeEEEEEEeeec
Confidence 678888887665432 112343 2456777655443 356666655443
No 60
>COG4325 Predicted membrane protein [Function unknown]
Probab=22.63 E-value=91 Score=26.60 Aligned_cols=38 Identities=13% Similarity=-0.088 Sum_probs=31.4
Q ss_pred CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeec
Q 047670 108 DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALA 145 (167)
Q Consensus 108 g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~ 145 (167)
..-+-+...+|.+++.-|+..-.|+.|.+.|-.-+++.
T Consensus 256 ~~~Ihl~~r~Gdfvv~g~~L~~~~~~~~l~s~~~~~~~ 293 (464)
T COG4325 256 RYTIHLVTRVGDFVVAGGLLGWCWRRGTLPSDFPQRCL 293 (464)
T ss_pred ceEEEEEecCcceecCCCcEEEEecCCcCCchhHHHHh
Confidence 45777888999999999999999999998876555543
No 61
>COG2720 Uncharacterized vancomycin resistance protein [Defense mechanisms]
Probab=22.41 E-value=3.1e+02 Score=23.18 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCC
Q 047670 24 EALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPY 72 (167)
Q Consensus 24 ~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~ 72 (167)
.-+....-+.+++.+|.+++-.+ ||+ .....++..+..||||
T Consensus 228 ~~~GvGGGICQvStTlfna~~~A-GL~------iVeR~~HSy~v~yypp 269 (376)
T COG2720 228 SDSGVGGGICQVSTTLFNAVYQA-GLP------IVERNNHSYRVFYYPP 269 (376)
T ss_pred cccccCcceehhHHHHHHHHHhc-Cch------hheeccccccCCcCCC
Confidence 34445556677888888887763 554 2234456788899986
No 62
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=22.26 E-value=71 Score=18.73 Aligned_cols=32 Identities=3% Similarity=-0.073 Sum_probs=17.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhcCCCchhh
Q 047670 23 REALEWSQHV-KQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 23 ~~~~~y~~~~-~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
.++.++.+.= ..+....+..||.+||.+.+.+
T Consensus 25 ~tl~~~~~~~~~~~~~~~l~~ia~~l~~~~~el 57 (63)
T PF13443_consen 25 STLSRILNGKPSNPSLDTLEKIAKALNCSPEEL 57 (63)
T ss_dssp HHHHHHHTTT-----HHHHHHHHHHHT--HHHC
T ss_pred HHHHHHHhcccccccHHHHHHHHHHcCCCHHHH
Confidence 3455555543 5677788888888888876554
No 63
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=21.43 E-value=1.2e+02 Score=20.44 Aligned_cols=24 Identities=13% Similarity=0.259 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
++-.+++..|.+.+++.||++++.
T Consensus 72 e~k~~l~~~i~~~l~~~lgi~~~r 95 (116)
T PTZ00397 72 SNNSSIAAAITKILASHLKVKSER 95 (116)
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 445678888999999999999764
No 64
>PF14549 P22_Cro: DNA-binding transcriptional regulator Cro; PDB: 1RZS_A 3BD1_A 3QWS_A 2HIN_B.
Probab=20.88 E-value=52 Score=20.03 Aligned_cols=12 Identities=25% Similarity=0.362 Sum_probs=6.9
Q ss_pred hhHHhhCCeeec
Q 047670 127 VFQILSNDEYKS 138 (167)
Q Consensus 127 ~le~~SnG~~~s 138 (167)
.+|.+|||.+++
T Consensus 40 ~Ie~~T~G~l~~ 51 (60)
T PF14549_consen 40 QIEKLTNGKLKC 51 (60)
T ss_dssp HHHHHTTTSS--
T ss_pred HHHHHhCCceee
Confidence 466777777664
No 65
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=20.72 E-value=35 Score=20.00 Aligned_cols=24 Identities=21% Similarity=0.644 Sum_probs=18.1
Q ss_pred CeEEEeecCCCeEEEEcchhhHHhhCC
Q 047670 108 DDWVDVKPVPGALVVDIGDVFQILSND 134 (167)
Q Consensus 108 g~W~~v~~~~~~~vvn~Gd~le~~SnG 134 (167)
|+++.|+..++ ..+|+..+.-.+.
T Consensus 15 GeF~~ik~~~~---~~vG~eI~~~~~~ 38 (56)
T PF12791_consen 15 GEFIKIKRKPG---MEVGQEIEFDEKD 38 (56)
T ss_pred CcEEEEeCCCC---CcccCEEEEechh
Confidence 89999998888 7788766655444
No 66
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=20.22 E-value=2.1e+02 Score=22.15 Aligned_cols=62 Identities=6% Similarity=0.090 Sum_probs=33.0
Q ss_pred CCCcc-EEeeCCeEEEeecCCCeEEEEcchhhHHhhCCe-----------eecc-cceeecCCCCCCeEEEEeeecCC
Q 047670 98 HHGGL-QCKCGDDWVDVKPVPGALVVDIGDVFQILSNDE-----------YKSM-DHRALANSFREARVSAVVFFAPS 162 (167)
Q Consensus 98 ~~~GL-qv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~-----------~~s~-~HRV~~~~~~~~R~S~~~F~~p~ 162 (167)
..+|| ||..+|+++.+.+....+ ..|+++..+++.. +.+. -+.++...+ .....++.|..|+
T Consensus 44 p~~Gl~ev~~~~~i~Y~~~dg~y~--i~G~l~d~~~~~~~~~t~~~~~~~~~~l~~~~i~~g~~-~~k~~I~vFtDp~ 118 (232)
T PRK10877 44 PVAGMKTVLTESGVLYITDDGKHI--IQGPMYDVSGTAPVNVTNQLLLKKLNALEKEMIVYKAP-QEKHVITVFTDIT 118 (232)
T ss_pred CCCCeEEEEECCeEEEEcCCCCEE--EeeeeEecCCCCCCChHHHHHHHHHHhhhhhcEEecCC-CCCEEEEEEECCC
Confidence 45665 455566777776655543 3488777665421 1110 122333222 4555677887775
Done!