Query 047670
Match_columns 167
No_of_seqs 148 out of 1093
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 23:58:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047670.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047670hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 5.6E-50 1.9E-54 323.9 17.2 164 2-167 89-259 (319)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.1E-50 1.4E-54 323.9 15.9 157 9-167 117-277 (312)
3 1gp6_A Leucoanthocyanidin diox 100.0 8.9E-50 3.1E-54 327.0 16.0 152 12-165 157-311 (356)
4 1dcs_A Deacetoxycephalosporin 100.0 1.4E-48 4.8E-53 314.8 16.1 158 2-167 100-273 (311)
5 1odm_A Isopenicillin N synthas 100.0 4.7E-48 1.6E-52 314.1 16.5 155 9-167 126-294 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 9E-48 3.1E-52 306.0 14.9 155 12-167 94-260 (280)
7 3dkq_A PKHD-type hydroxylase S 95.9 0.041 1.4E-06 42.2 8.4 78 64-160 100-194 (243)
8 2rg4_A Uncharacterized protein 95.4 0.29 9.8E-06 36.7 11.2 44 108-163 166-209 (216)
9 3tht_A Alkylated DNA repair pr 94.7 0.4 1.4E-05 38.6 10.8 67 64-137 199-272 (345)
10 3s57_A Alpha-ketoglutarate-dep 91.3 0.76 2.6E-05 34.0 7.2 81 64-158 101-200 (204)
11 2iuw_A Alkylated repair protei 91.1 1.1 3.7E-05 34.0 8.1 83 64-159 127-228 (238)
12 3i3q_A Alpha-ketoglutarate-dep 90.6 1.5 5.1E-05 32.7 8.2 80 64-159 106-201 (211)
13 2hbt_A EGL nine homolog 1; pro 90.5 0.56 1.9E-05 35.8 5.9 79 65-160 119-212 (247)
14 2jig_A Prolyl-4 hydroxylase; h 88.3 1.7 5.9E-05 32.2 7.2 48 110-162 170-218 (224)
15 3itq_A Prolyl 4-hydroxylase, a 87.9 2.8 9.7E-05 31.2 8.1 107 35-161 91-212 (216)
16 2da7_A Zinc finger homeobox pr 54.8 3.4 0.00012 25.3 0.6 40 20-59 15-54 (71)
17 2x4k_A 4-oxalocrotonate tautom 47.9 21 0.00072 19.9 3.4 24 31-54 18-41 (63)
18 3abf_A 4-oxalocrotonate tautom 43.4 30 0.001 19.5 3.6 23 32-54 17-39 (64)
19 1e5r_A Proline oxidase; oxidor 39.7 65 0.0022 25.0 5.9 62 82-159 104-175 (290)
20 3rcq_A Aspartyl/asparaginyl be 39.7 63 0.0022 23.5 5.5 45 119-164 138-187 (197)
21 2vf9_A Coat protein; virion, R 39.3 11 0.00037 24.4 1.1 18 128-145 49-66 (131)
22 1otf_A 4-oxalocrotonate tautom 39.3 34 0.0012 19.0 3.3 23 31-53 15-37 (62)
23 2opa_A Probable tautomerase YW 38.8 35 0.0012 18.9 3.4 23 31-53 15-37 (61)
24 1y66_A Engrailed homeodomain; 35.9 28 0.00096 18.9 2.3 41 16-56 3-43 (52)
25 3kt7_A PKHD-type hydroxylase T 34.1 98 0.0034 26.8 6.5 102 38-160 105-227 (633)
26 3ry0_A Putative tautomerase; o 34.1 46 0.0016 19.0 3.4 23 31-53 15-37 (65)
27 3m21_A Probable tautomerase HP 31.6 53 0.0018 18.8 3.4 23 31-53 18-40 (67)
28 3m20_A 4-oxalocrotonate tautom 31.0 47 0.0016 18.8 3.0 23 31-53 14-36 (62)
29 1gyx_A YDCE, B1461, hypothetic 29.2 58 0.002 19.3 3.3 24 31-54 16-39 (76)
30 3mb2_A 4-oxalocrotonate tautom 28.8 59 0.002 19.0 3.3 23 31-53 16-38 (72)
31 3hsh_A Endostatin, collagen al 24.7 88 0.003 18.0 3.3 25 89-115 24-48 (56)
32 3n3f_A Collagen alpha-1(XV) ch 24.7 85 0.0029 17.9 3.2 25 89-115 22-46 (54)
33 3ej9_A Alpha-subunit of trans- 23.3 88 0.003 18.5 3.4 23 31-53 16-38 (76)
34 2qt7_A Receptor-type tyrosine- 22.7 47 0.0016 21.2 2.0 24 35-58 18-41 (91)
35 2e5q_A PHD finger protein 19; 21.8 34 0.0012 20.2 1.1 19 126-144 13-32 (63)
36 2kt8_A Probable surface protei 21.3 1.2E+02 0.0042 18.0 3.7 39 78-119 13-52 (76)
37 1u9d_A Hypothetical protein VC 20.3 94 0.0032 20.8 3.2 26 30-55 27-52 (122)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5.6e-50 Score=323.93 Aligned_cols=164 Identities=34% Similarity=0.595 Sum_probs=147.7
Q ss_pred eeeEeccCCC---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccC---CcceeEEeecCCCCC
Q 047670 2 TLVMRRGPTL---PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFI---DGRMMIGNYYPYCPQ 75 (167)
Q Consensus 2 ~l~~~~~P~~---~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~---~~~~~~~~~yp~~~~ 75 (167)
+|++...|.. .||+. |++||+++++|+++|.+++.+|+++|+++||+++++|.+.+.. ..+.+|++|||||++
T Consensus 89 ~~~~~~~p~~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~ 167 (319)
T 1w9y_A 89 TFFLKHLPISNISEVPDL-DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPK 167 (319)
T ss_dssp EEEEEEESCCGGGGCTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSC
T ss_pred heeeecCCcccccccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcc
Confidence 4555544431 57765 4579999999999999999999999999999999999987753 456899999999998
Q ss_pred CCCcccccCcCCCCCeeEEeeC-CCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEE
Q 047670 76 PDLTVGIPFHTDPGALAILLQD-HHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVS 154 (167)
Q Consensus 76 ~~~~~~~~~HtD~~~lTll~~~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S 154 (167)
++...|+++|||+|+||+|+|| +++||||+.+|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|+|
T Consensus 168 ~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~-~~R~S 246 (319)
T 1w9y_A 168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GARMS 246 (319)
T ss_dssp GGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS-SCCEE
T ss_pred cccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCC-CCceE
Confidence 8888999999999999999996 799999998999999999999999999999999999999999999999887 89999
Q ss_pred EEeeecCCCCCCC
Q 047670 155 AVVFFAPSDRDRL 167 (167)
Q Consensus 155 ~~~F~~p~~d~~l 167 (167)
++||++|+.|+.|
T Consensus 247 ia~F~~p~~d~~i 259 (319)
T 1w9y_A 247 LASFYNPGSDAVI 259 (319)
T ss_dssp EEEEEECCTTCEE
T ss_pred EEEEecCCCCCeE
Confidence 9999999998753
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.1e-50 Score=323.87 Aligned_cols=157 Identities=22% Similarity=0.308 Sum_probs=141.9
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 9 PTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 9 P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
|| .||+..| +||+++++|+++|.+++.+|+++|+++||+++++|.+.+..+.+.+|++|||||+.++..+|+++|||+
T Consensus 117 ~n-~wP~~~p-~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~ 194 (312)
T 3oox_A 117 DN-VWPAEIP-AFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDI 194 (312)
T ss_dssp CC-CCCTTST-THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCC
T ss_pred CC-CCCCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecC
Confidence 44 6887754 799999999999999999999999999999999999988887889999999999876556999999999
Q ss_pred CCeeEEeeCCCCccEEeeC-CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCC---CCCeEEEEeeecCCCC
Q 047670 89 GALAILLQDHHGGLQCKCG-DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSF---REARVSAVVFFAPSDR 164 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~---~~~R~S~~~F~~p~~d 164 (167)
|+||+|+||+++||||+.+ |+|++|+|++|++|||+||+||+||||+|||++|||+.++. +.+|||++||++|+.|
T Consensus 195 g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d 274 (312)
T 3oox_A 195 NTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASD 274 (312)
T ss_dssp SSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTT
T ss_pred ceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCC
Confidence 9999999999999999865 99999999999999999999999999999999999987742 2689999999999998
Q ss_pred CCC
Q 047670 165 DRL 167 (167)
Q Consensus 165 ~~l 167 (167)
+.|
T Consensus 275 ~~i 277 (312)
T 3oox_A 275 YEI 277 (312)
T ss_dssp CEE
T ss_pred cEE
Confidence 753
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=8.9e-50 Score=327.01 Aligned_cols=152 Identities=35% Similarity=0.510 Sum_probs=143.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhccc---CCcceeEEeecCCCCCCCCcccccCcCCC
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTF---IDGRMMIGNYYPYCPQPDLTVGIPFHTDP 88 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~---~~~~~~~~~~yp~~~~~~~~~~~~~HtD~ 88 (167)
.||+.. ++||+++++|+++|.+++.+|+++|+++||+++++|.+.+. ...+.+|++|||+|++++..+|+++|||+
T Consensus 157 ~wP~~~-~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~ 235 (356)
T 1gp6_A 157 IWPKTP-SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDV 235 (356)
T ss_dssp GSCCSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCC
T ss_pred cCCCcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCC
Confidence 577654 47999999999999999999999999999999999999876 46678999999999988888999999999
Q ss_pred CCeeEEeeCCCCccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCCCC
Q 047670 89 GALAILLQDHHGGLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSDRD 165 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~d~ 165 (167)
|+||||+||+++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ++|||++||++|+.|+
T Consensus 236 g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~-~~R~Sia~F~~P~~d~ 311 (356)
T 1gp6_A 236 SALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKDK 311 (356)
T ss_dssp SSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS-CCEEEEEEEEECCTTT
T ss_pred CeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCC-CCEEEEEEeecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999887 8999999999999997
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.4e-48 Score=314.79 Aligned_cols=158 Identities=16% Similarity=0.217 Sum_probs=136.9
Q ss_pred eeeEeccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CchhhhhcccCCcceeEEeecCCCCCCC
Q 047670 2 TLVMRRGPTLPELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGL----ATGRMKEMTFIDGRMMIGNYYPYCPQPD 77 (167)
Q Consensus 2 ~l~~~~~P~~~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~----~~~~~~~~~~~~~~~~~~~~yp~~~~~~ 77 (167)
+|++...|| .|| |++||+++++|+++|.+++.+|+++|+++||+ ++++|.+. .+.+|++|||||++++
T Consensus 100 ~~~~~~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~ 171 (311)
T 1dcs_A 100 CYSMGTADN-LFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHR 171 (311)
T ss_dssp EEEECSSSC-CCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----
T ss_pred eeeccCCCC-CCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCccc
Confidence 455555577 688 56899999999999999999999999999999 77888765 6689999999998763
Q ss_pred --C--cccccCcCCCCCeeEEeeC-CCCc---cEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCC-
Q 047670 78 --L--TVGIPFHTDPGALAILLQD-HHGG---LQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSF- 148 (167)
Q Consensus 78 --~--~~~~~~HtD~~~lTll~~~-~~~G---Lqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~- 148 (167)
. .+|+++|||+|+||||+|| +++| |||+++|+|++|+|++|++|||+||+||+||||+|||++|||+.++.
T Consensus 172 ~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~ 251 (311)
T 1dcs_A 172 SAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRD 251 (311)
T ss_dssp ------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC---
T ss_pred ccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcc
Confidence 3 6789999999999999999 8999 99999999999999999999999999999999999999999999871
Q ss_pred ---CCCeEEEEeeecCCCCCCC
Q 047670 149 ---REARVSAVVFFAPSDRDRL 167 (167)
Q Consensus 149 ---~~~R~S~~~F~~p~~d~~l 167 (167)
+++|||++||++|+.|+.|
T Consensus 252 ~~~~~~R~Si~~F~~p~~d~~i 273 (311)
T 1dcs_A 252 QIAGSSRTSSVFFLRPNADFTF 273 (311)
T ss_dssp -CTTCCEEEEEEEECCCTTCEE
T ss_pred cCCCCCeEEEEEEEcCCCCcEE
Confidence 3899999999999998753
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.7e-48 Score=314.13 Aligned_cols=155 Identities=19% Similarity=0.140 Sum_probs=142.1
Q ss_pred CCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhcccCCcceeE--EeecC------C---CCCC
Q 047670 9 PTLPELDE-FPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTFIDGRMMI--GNYYP------Y---CPQP 76 (167)
Q Consensus 9 P~~~~~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~--~~~yp------~---~~~~ 76 (167)
|| .||+. .+++||+++++|+++|.+++.+|+++|+++||+++++|.+.+..+.+.+| ++||| | |+++
T Consensus 126 ~n-~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~ 204 (331)
T 1odm_A 126 VN-VWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAA 204 (331)
T ss_dssp CC-CCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECT
T ss_pred CC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCc
Confidence 55 68875 13469999999999999999999999999999999999998888888999 99999 7 7777
Q ss_pred CC-cccccCcCCCCCeeEEeeCCCCccEEeeC-CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEE
Q 047670 77 DL-TVGIPFHTDPGALAILLQDHHGGLQCKCG-DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVS 154 (167)
Q Consensus 77 ~~-~~~~~~HtD~~~lTll~~~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S 154 (167)
+. .+|+++|||+|+||||+||+++||||+++ | |++|+|.+|++|||+||+||+||||+|||++|||+.+ . ++|||
T Consensus 205 ~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~-~~R~S 281 (331)
T 1odm_A 205 DGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-N-AERQS 281 (331)
T ss_dssp TSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-C-SCEEE
T ss_pred cccccccccccCCCeEEEEeeCCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-C-CCEEE
Confidence 65 89999999999999999999999999965 7 9999999999999999999999999999999999965 4 79999
Q ss_pred EEeeecCCCCCCC
Q 047670 155 AVVFFAPSDRDRL 167 (167)
Q Consensus 155 ~~~F~~p~~d~~l 167 (167)
++||++|+.|+.|
T Consensus 282 ia~F~~P~~d~~i 294 (331)
T 1odm_A 282 LPFFVNLGYDSVI 294 (331)
T ss_dssp EEEEECCCTTCBC
T ss_pred EEEEEcCCCCCEE
Confidence 9999999999864
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=9e-48 Score=306.04 Aligned_cols=155 Identities=22% Similarity=0.303 Sum_probs=135.8
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--hh---hhhcccCCc-ceeEEeecCCCCCCC--Cccccc
Q 047670 12 PELDEFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLAT--GR---MKEMTFIDG-RMMIGNYYPYCPQPD--LTVGIP 83 (167)
Q Consensus 12 ~~~~~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~--~~---~~~~~~~~~-~~~~~~~yp~~~~~~--~~~~~~ 83 (167)
+|++ +|++||+++++|+++|.+++.+|+++|+++||++. ++ |.+.+..+. +.+|++|||||+.++ ..+|++
T Consensus 94 p~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~ 172 (280)
T 3on7_A 94 PWGR-IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAA 172 (280)
T ss_dssp TTSC-CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEE
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCccccc
Confidence 3443 46789999999999999999999999999999763 22 445554444 789999999998654 478999
Q ss_pred CcCCCCCeeEEeeCCCCccEEee-CCeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCC---CCCeEEEEeee
Q 047670 84 FHTDPGALAILLQDHHGGLQCKC-GDDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSF---REARVSAVVFF 159 (167)
Q Consensus 84 ~HtD~~~lTll~~~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~---~~~R~S~~~F~ 159 (167)
+|||+|+||+|+||+++||||++ +|+|++|+|.+|++|||+||+||+||||+|||++|||+.++. ..+|||++||+
T Consensus 173 ~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~ 252 (280)
T 3on7_A 173 AHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFL 252 (280)
T ss_dssp EECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEE
T ss_pred CCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEE
Confidence 99999999999999999999996 499999999999999999999999999999999999998743 26899999999
Q ss_pred cCCCCCCC
Q 047670 160 APSDRDRL 167 (167)
Q Consensus 160 ~p~~d~~l 167 (167)
+|+.|+.|
T Consensus 253 ~P~~d~~i 260 (280)
T 3on7_A 253 HPHPSVVL 260 (280)
T ss_dssp CCCTTCBC
T ss_pred cCCCCCEE
Confidence 99999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.90 E-value=0.041 Score=42.23 Aligned_cols=78 Identities=21% Similarity=0.171 Sum_probs=51.8
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCC-----------CeeEEee--C----CCCccEEeeCCeEEEeecCCCeEEEEcch
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPG-----------ALAILLQ--D----HHGGLQCKCGDDWVDVKPVPGALVVDIGD 126 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~-----------~lTll~~--~----~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd 126 (167)
-+++.+|.+.. -..+|.|.. .+|+++- + +.+.|.+.....=..|.|..|.+++.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 47788887632 256666653 4555543 2 1244666665445679999999888642
Q ss_pred hhHHhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 127 VFQILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 127 ~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
..+|+|..... ..|++++.+++
T Consensus 173 -----------~~lH~v~pV~~-G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLS-GERTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEE-ECEEEEEEEEE
T ss_pred -----------CCeEcCccccc-cCEEEEEEehh
Confidence 36899977654 58999998876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.36 E-value=0.29 Score=36.65 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=33.9
Q ss_pred CeEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeecCCC
Q 047670 108 DDWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFAPSD 163 (167)
Q Consensus 108 g~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~p~~ 163 (167)
..+..|.|.+|.+|+.-+. -.|+|..+..+.+|+|++|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3566889999999987653 3799988765479999999998865
No 9
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=94.66 E-value=0.4 Score=38.56 Aligned_cols=67 Identities=24% Similarity=0.148 Sum_probs=45.5
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCC-C-----eeEEeeCCCCccEEeeC-CeEEEeecCCCeEEEEcchhhHHhhCCee
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPG-A-----LAILLQDHHGGLQCKCG-DDWVDVKPVPGALVVDIGDVFQILSNDEY 136 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~-~-----lTll~~~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~le~~SnG~~ 136 (167)
...+|+|.+. -++++|.|.. . +|+-+. ...=+.+... |.+..+...+|+++|+-|++=..|.-|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4568999762 2689999974 2 222111 2222444443 67999999999999999999989976654
Q ss_pred e
Q 047670 137 K 137 (167)
Q Consensus 137 ~ 137 (167)
+
T Consensus 272 ~ 272 (345)
T 3tht_A 272 C 272 (345)
T ss_dssp C
T ss_pred c
Confidence 4
No 10
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=91.26 E-value=0.76 Score=34.03 Aligned_cols=81 Identities=14% Similarity=0.036 Sum_probs=50.5
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCC-C-------eeEEeeCCCCccEEeeC----------CeEEEeecCCCeEEEEcc
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPG-A-------LAILLQDHHGGLQCKCG----------DDWVDVKPVPGALVVDIG 125 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~-~-------lTll~~~~~~GLqv~~~----------g~W~~v~~~~~~~vvn~G 125 (167)
...+|+|.+.. -++++|.|-. . +++-+. ...=+.+... +....+...+|+++|+-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45689998732 2588898862 1 122221 1222334332 257899999999999999
Q ss_pred hhhHHhhCCeeecccceeecCC-CCCCeEEEEee
Q 047670 126 DVFQILSNDEYKSMDHRALANS-FREARVSAVVF 158 (167)
Q Consensus 126 d~le~~SnG~~~s~~HRV~~~~-~~~~R~S~~~F 158 (167)
++=..|. |.|-... ....|+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 8877776 4443322 12689999884
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=91.12 E-value=1.1 Score=33.99 Aligned_cols=83 Identities=16% Similarity=0.145 Sum_probs=51.9
Q ss_pred eeEEeecCCCCCCCCcccccCcCCCC--------CeeEEeeCCCCccEEeeC-----------CeEEEeecCCCeEEEEc
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDPG--------ALAILLQDHHGGLQCKCG-----------DDWVDVKPVPGALVVDI 124 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~~--------~lTll~~~~~~GLqv~~~-----------g~W~~v~~~~~~~vvn~ 124 (167)
.+.+|+|++. .-++++|.|-. ..|+-+. ...=+.+... +..+.+...+|+++|+-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568999873 22588898853 2222221 1112333322 36889999999999999
Q ss_pred chhhHHhhCCeeecccceeecCCCCCCeEEEEeee
Q 047670 125 GDVFQILSNDEYKSMDHRALANSFREARVSAVVFF 159 (167)
Q Consensus 125 Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~ 159 (167)
|++=..|.-|.-+.. ... ..|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~-~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSR-EPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCC-CCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCC-CCEEEEEeee
Confidence 998777765543321 122 6899999854
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=90.55 E-value=1.5 Score=32.69 Aligned_cols=80 Identities=16% Similarity=0.066 Sum_probs=49.7
Q ss_pred eeEEeecCCCCCCCCcccccCcCCC-C------CeeEEeeCCCCccEEeeC---CeEEEeecCCCeEEEEcchhhHHhhC
Q 047670 64 MMIGNYYPYCPQPDLTVGIPFHTDP-G------ALAILLQDHHGGLQCKCG---DDWVDVKPVPGALVVDIGDVFQILSN 133 (167)
Q Consensus 64 ~~~~~~yp~~~~~~~~~~~~~HtD~-~------~lTll~~~~~~GLqv~~~---g~W~~v~~~~~~~vvn~Gd~le~~Sn 133 (167)
...+|+|.+. . ++++|.|- . .+++-+. ...=+.+... +....+...+|+++|.-|++= .|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 4568999762 3 68999993 2 1222221 2222344332 668899999999999988762 23
Q ss_pred CeeecccceeecCCC------CCCeEEEEeee
Q 047670 134 DEYKSMDHRALANSF------REARVSAVVFF 159 (167)
Q Consensus 134 G~~~s~~HRV~~~~~------~~~R~S~~~F~ 159 (167)
.|.|..... +..|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 366654432 14699998853
No 13
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=90.48 E-value=0.56 Score=35.80 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=52.7
Q ss_pred eEEeecCCCCCCCCcccccCcCCCC-----CeeEEee--CC------CCccEEeeCC--eEEEeecCCCeEEEEcchhhH
Q 047670 65 MIGNYYPYCPQPDLTVGIPFHTDPG-----ALAILLQ--DH------HGGLQCKCGD--DWVDVKPVPGALVVDIGDVFQ 129 (167)
Q Consensus 65 ~~~~~yp~~~~~~~~~~~~~HtD~~-----~lTll~~--~~------~~GLqv~~~g--~W~~v~~~~~~~vvn~Gd~le 129 (167)
+.+.+|++. .-...+|.|.. .+|+++- ++ .+.|.++..+ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 557788751 12356677762 5677664 21 3346777764 5789999999998886431
Q ss_pred HhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 130 ILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 130 ~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
-.+|+|.... ..|+|++.++.
T Consensus 192 --------~~~H~V~p~~--~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQPAY--ATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECCBS--SCEEEEEEEEE
T ss_pred --------CceeeeccCC--CEEEEEEEEEc
Confidence 1589997744 69999988664
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.30 E-value=1.7 Score=32.20 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=33.4
Q ss_pred EEEeecCCCeEEEEcchhhHHhhCCee-ecccceeecCCCCCCeEEEEeeecCC
Q 047670 110 WVDVKPVPGALVVDIGDVFQILSNDEY-KSMDHRALANSFREARVSAVVFFAPS 162 (167)
Q Consensus 110 W~~v~~~~~~~vvn~Gd~le~~SnG~~-~s~~HRV~~~~~~~~R~S~~~F~~p~ 162 (167)
-+.|.|..|.+|+.-- ...+|.. ..++|+|..... ..|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~-G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLK-GDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEE-SEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCcccc-ceEEEEEEeEEcC
Confidence 4789999998877643 1234433 678999977644 5899998887644
No 15
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=87.93 E-value=2.8 Score=31.21 Aligned_cols=107 Identities=14% Similarity=0.036 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCCC-----------CeeEEee--C-CCC
Q 047670 35 LGELLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDPG-----------ALAILLQ--D-HHG 100 (167)
Q Consensus 35 l~~~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~~-----------~lTll~~--~-~~~ 100 (167)
+...|.+-|+..+|++.+. .-.+++.+|.+... ..+|.|+. .+|+++- | ..+
T Consensus 91 ~v~~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~G 156 (216)
T 3itq_A 91 LTAKIEKRISSIMNVPASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEG 156 (216)
T ss_dssp HHHHHHHHHHHHHTSCGGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEE
T ss_pred HHHHHHHHHHHhcCceecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcC
Confidence 3444555555556665321 22467777865321 46677653 3666664 2 223
Q ss_pred ccEEeeCCeEEEeecCCCeEEEEcchhhHHhhCCe-eecccceeecCCCCCCeEEEEeeecC
Q 047670 101 GLQCKCGDDWVDVKPVPGALVVDIGDVFQILSNDE-YKSMDHRALANSFREARVSAVVFFAP 161 (167)
Q Consensus 101 GLqv~~~g~W~~v~~~~~~~vvn~Gd~le~~SnG~-~~s~~HRV~~~~~~~~R~S~~~F~~p 161 (167)
|==+... .=+.|.|..|.+++.-. ...+|. -..++|+|..... ..|+++..+++-
T Consensus 157 GeT~Fp~-~~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~-G~K~v~~~W~~~ 212 (216)
T 3itq_A 157 GETFFPK-LNLSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTK-GEKWIATQWVRR 212 (216)
T ss_dssp CCEEETT-TTEEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEE-SCEEEEEEEEES
T ss_pred ceeEecC-CCCEEecCCCeEEEEec----cCCCCCCCCccccccceecc-ccEEEEEeeEec
Confidence 3222222 12678899998877543 112232 2467999876654 589998887754
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.75 E-value=3.4 Score=25.34 Aligned_cols=40 Identities=10% Similarity=-0.105 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhccc
Q 047670 20 IRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKEMTF 59 (167)
Q Consensus 20 ~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~~~~ 59 (167)
+-+..+++|+..-.+-..+-+..||+.+||+.+.+..+|.
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 4577899999988888888899999999999988776653
No 17
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=47.88 E-value=21 Score=19.89 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCchhh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
+-.+++..|.+++++.+|.+++.+
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 346788999999999999997643
No 18
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=43.44 E-value=30 Score=19.46 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhcCCCchhh
Q 047670 32 VKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 32 ~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
-.+++..|.+.+++.||.+++.+
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 45788899999999999997653
No 19
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=39.69 E-value=65 Score=25.01 Aligned_cols=62 Identities=21% Similarity=0.150 Sum_probs=36.6
Q ss_pred ccCcCCC--------CCeeEEeeC-CCCccEEeeCCeEEEeecCCCe-EEEEcchhhHHhhCCeeecccceeecCCCCCC
Q 047670 82 IPFHTDP--------GALAILLQD-HHGGLQCKCGDDWVDVKPVPGA-LVVDIGDVFQILSNDEYKSMDHRALANSFREA 151 (167)
Q Consensus 82 ~~~HtD~--------~~lTll~~~-~~~GLqv~~~g~W~~v~~~~~~-~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~ 151 (167)
+.+|+|. +.+.++..= ..+|..+..+|+-+..++ |. ..+| -+..|.|.+.+. .+
T Consensus 104 I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~-~~ 167 (290)
T 1e5r_A 104 VIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSE-IS 167 (290)
T ss_dssp EEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSS-SC
T ss_pred eeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCC-CC
Confidence 7888888 234444432 345555555553333332 32 1211 245899999988 89
Q ss_pred eEEEEeee
Q 047670 152 RVSAVVFF 159 (167)
Q Consensus 152 R~S~~~F~ 159 (167)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99988765
No 20
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=39.67 E-value=63 Score=23.52 Aligned_cols=45 Identities=11% Similarity=0.191 Sum_probs=33.1
Q ss_pred eEEEEcchhhHHhhCCee----ecccceeecCCCCCCeEEEEe-eecCCCC
Q 047670 119 ALVVDIGDVFQILSNDEY----KSMDHRALANSFREARVSAVV-FFAPSDR 164 (167)
Q Consensus 119 ~~vvn~Gd~le~~SnG~~----~s~~HRV~~~~~~~~R~S~~~-F~~p~~d 164 (167)
...+.+|+.-..|..|.. -|-.|.|.+.+. ..|+-+.+ |.+|+..
T Consensus 138 ~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d-~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 138 GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDAS-SFRLIFIVDVWHPELT 187 (197)
T ss_dssp SEEEEETTEEECCCBTCEEEECTTSCEEEEECSS-SCEEEEEEEEECTTSC
T ss_pred CcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCC-CCEEEEEEeeeCCCCC
Confidence 345667888888888864 367999999887 89988765 5566543
No 21
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=39.35 E-value=11 Score=24.43 Aligned_cols=18 Identities=28% Similarity=0.294 Sum_probs=14.4
Q ss_pred hHHhhCCeeecccceeec
Q 047670 128 FQILSNDEYKSMDHRALA 145 (167)
Q Consensus 128 le~~SnG~~~s~~HRV~~ 145 (167)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 345699999999988764
No 22
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=39.27 E-value=34 Score=19.03 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++.+.||.+++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34678889999999999998753
No 23
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=38.78 E-value=35 Score=18.91 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++.+.||.+++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 34678889999999999998753
No 24
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=35.86 E-value=28 Score=18.95 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=31.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q 047670 16 EFPEIRRREALEWSQHVKQLGELLMGLLCEGLGLATGRMKE 56 (167)
Q Consensus 16 ~~p~~fr~~~~~y~~~~~~l~~~ll~~l~~~lg~~~~~~~~ 56 (167)
.|.+.....+.+|.+.-.++...-+-..|.-||+....+..
T Consensus 3 qwseeverklkefvrrhqeitqetlheyaqklglnqqaieq 43 (52)
T 1y66_A 3 QWSEEVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQ 43 (52)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHH
Confidence 36666677788888888889888888888888886544433
No 25
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=34.09 E-value=98 Score=26.79 Aligned_cols=102 Identities=15% Similarity=0.049 Sum_probs=54.0
Q ss_pred HHHHHHHHhcCCCchhhhhcccCCcceeEEeecCCCCCCCCcccccCcCCC-C--CeeEEee----C------CCCccEE
Q 047670 38 LLMGLLCEGLGLATGRMKEMTFIDGRMMIGNYYPYCPQPDLTVGIPFHTDP-G--ALAILLQ----D------HHGGLQC 104 (167)
Q Consensus 38 ~ll~~l~~~lg~~~~~~~~~~~~~~~~~~~~~yp~~~~~~~~~~~~~HtD~-~--~lTll~~----~------~~~GLqv 104 (167)
.++..|++..|++. +.. ...-+.++.|++. --...|.|. + .+|+++- + ..+.|++
T Consensus 105 ~Fr~~Ls~iTGi~~--Lsg----~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--LSG----SKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC--CCS----SCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc--cCC----CceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 44556666666631 110 0112456667652 225667773 1 3455442 1 1344777
Q ss_pred eeCC--------eEEEeecCCCeEEEEcchhhHHhhCCeeecccceeecCCCCCCeEEEEeeec
Q 047670 105 KCGD--------DWVDVKPVPGALVVDIGDVFQILSNDEYKSMDHRALANSFREARVSAVVFFA 160 (167)
Q Consensus 105 ~~~g--------~W~~v~~~~~~~vvn~Gd~le~~SnG~~~s~~HRV~~~~~~~~R~S~~~F~~ 160 (167)
+... -...|.|..|.+++..- +-+ ...|.|.....++.|+|++-.++
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~v------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKV------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEEC------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEc------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 6532 36778999999888753 102 23565522211279999986554
No 26
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=34.06 E-value=46 Score=18.96 Aligned_cols=23 Identities=35% Similarity=0.394 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++.+.+|.+++.
T Consensus 15 qk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 15 EVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45688899999999999998754
No 27
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=31.57 E-value=53 Score=18.84 Aligned_cols=23 Identities=22% Similarity=0.147 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++++.||.+++.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 44678888999999999998654
No 28
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=31.03 E-value=47 Score=18.81 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++++.||.+++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 34678889999999999998754
No 29
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=29.25 E-value=58 Score=19.27 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCchhh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGRM 54 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~~ 54 (167)
+-.+++..|.+++.+.||.+++..
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 446888999999999999997643
No 30
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=28.83 E-value=59 Score=18.98 Aligned_cols=23 Identities=9% Similarity=0.147 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+++++.+|.+++.
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 44678889999999999999764
No 31
>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A
Probab=24.69 E-value=88 Score=17.98 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=17.9
Q ss_pred CCeeEEeeCCCCccEEeeCCeEEEeec
Q 047670 89 GALAILLQDHHGGLQCKCGDDWVDVKP 115 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~~g~W~~v~~ 115 (167)
|.|..+. +..-|.|..+++|..|..
T Consensus 24 GtL~yv~--d~~eLyiRVr~Gwr~v~L 48 (56)
T 3hsh_A 24 GWLIFVA--EQEELYVRVQNGFRKVQL 48 (56)
T ss_dssp TCEEEET--TTTEEEEEETTEEEEECE
T ss_pred eeEEEEE--ecceEEEEEcCceeeeee
Confidence 3444443 566899999999999764
No 32
>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens}
Probab=24.67 E-value=85 Score=17.89 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=18.0
Q ss_pred CCeeEEeeCCCCccEEeeCCeEEEeec
Q 047670 89 GALAILLQDHHGGLQCKCGDDWVDVKP 115 (167)
Q Consensus 89 ~~lTll~~~~~~GLqv~~~g~W~~v~~ 115 (167)
|.|..+. +..-|.|..+++|..|..
T Consensus 22 GtL~yv~--d~~eLyiRVr~Gwr~v~L 46 (54)
T 3n3f_A 22 GTFIYLR--DSTEFFIRVRDGWKKLQL 46 (54)
T ss_dssp TEEEEET--TTTEEEEEETTEEEECCC
T ss_pred eeEEEEE--ecceEEEEEcCceeeeec
Confidence 3444443 566899999999999864
No 33
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=23.30 E-value=88 Score=18.54 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCchh
Q 047670 31 HVKQLGELLMGLLCEGLGLATGR 53 (167)
Q Consensus 31 ~~~~l~~~ll~~l~~~lg~~~~~ 53 (167)
+-.+++..|.+.+.+.+|.+++.
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~ 38 (76)
T 3ej9_A 16 QKRALSAGLLRVISEATGEPREN 38 (76)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 44688889999999999999764
No 34
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=22.70 E-value=47 Score=21.22 Aligned_cols=24 Identities=21% Similarity=0.466 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhcCCCchhhhhcc
Q 047670 35 LGELLMGLLCEGLGLATGRMKEMT 58 (167)
Q Consensus 35 l~~~ll~~l~~~lg~~~~~~~~~~ 58 (167)
=+..|++.+|+.|+++...|.+..
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~ 41 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINIS 41 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred HHHHHHHHHHHHhcCCccceeeeE
Confidence 367889999999999999988764
No 35
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.80 E-value=34 Score=20.25 Aligned_cols=19 Identities=16% Similarity=0.043 Sum_probs=12.7
Q ss_pred hhhHHhhCCe-eecccceee
Q 047670 126 DVFQILSNDE-YKSMDHRAL 144 (167)
Q Consensus 126 d~le~~SnG~-~~s~~HRV~ 144 (167)
|.|.+||+|+ |.+++-+|-
T Consensus 13 dVLarWsDGlfYlgtV~kV~ 32 (63)
T 2e5q_A 13 YVLCRWTDGLYYLGKIKRVS 32 (63)
T ss_dssp EEEEECTTSCEEEEEECCCC
T ss_pred EEEEEecCCCEEEEEEEEEe
Confidence 4678999995 555555543
No 36
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A
Probab=21.25 E-value=1.2e+02 Score=17.98 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=26.0
Q ss_pred CcccccCcCCCCCeeEEeeCCCCccEEeeC-CeEEEeecCCCe
Q 047670 78 LTVGIPFHTDPGALAILLQDHHGGLQCKCG-DDWVDVKPVPGA 119 (167)
Q Consensus 78 ~~~~~~~HtD~~~lTll~~~~~~GLqv~~~-g~W~~v~~~~~~ 119 (167)
..++.+|-+++..++.|... .-++|... |+|..|.. +|.
T Consensus 13 lnvR~~Ps~~~~ii~~l~~G--~~v~vl~~~~~W~kV~~-~g~ 52 (76)
T 2kt8_A 13 LNVREGASTSSKVIGSLSGN--TKVTIVGEEGAFYKIEY-KGS 52 (76)
T ss_dssp EEEESSSSTTSCEEEEECTT--CEEEEEEEETTEEEEEE-TTE
T ss_pred EEEEcCCCCCChhhEEECCC--CEEEEEEEeCCEEEEEE-CCE
Confidence 34567777888888877542 23555544 88999987 443
No 37
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=20.29 E-value=94 Score=20.82 Aligned_cols=26 Identities=23% Similarity=0.179 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhhh
Q 047670 30 QHVKQLGELLMGLLCEGLGLATGRMK 55 (167)
Q Consensus 30 ~~~~~l~~~ll~~l~~~lg~~~~~~~ 55 (167)
+.+.+++..|...|+..++.+++.|.
T Consensus 27 e~v~~lS~~Lid~La~i~~~~~e~fT 52 (122)
T 1u9d_A 27 HIVESLVPTLLNELSSLLSTARNAFT 52 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCE
T ss_pred HHHHHHhHHHHHHHHHHHCCCcccEE
Confidence 45678889999999999999988764
Done!