Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>047674
AAELRLKINKCIHKASLSPDKQEKEEGVVANGEEEEEDYCEESERLLSIHQALESLEAQL
SNLQNLQLQQRYDREVALAEIEFSRKMLLEKLKEYRGEDLEVIHEASAFAGETVQHDNDL
LLPPYPNRLPLSLTLENGYLSQFRYPRKSVQNGVITGELTKEGNKNIYESERNQVQTGST
TSRKGFGHFISSLAKTLLPLVGVVYVLNMSGVAQNLGKKSAPLKFLGIFRQPVIDEKRSV
FNVQCPPGKVLVVEGGEARCIVKERVEIPFDSVAVKPDINYGSG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047674
        (284 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052996 - symbol:PDV2 "AT2G16070" species:3702...   448  1.2e-45   2


>TAIR|locus:2052996 [details] [associations]
            symbol:PDV2 "AT2G16070" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0043572 "plastid fission"
            evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031359 "integral to chloroplast outer membrane" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC007134 GO:GO:0031359 EMBL:AB252217
            EMBL:AB252219 EMBL:AY056812 EMBL:AY080829 EMBL:AY113976
            EMBL:AY088807 IPI:IPI00544657 IPI:IPI00548142 PIR:D84536
            RefSeq:NP_028242.1 RefSeq:NP_849959.1 UniGene:At.14413
            IntAct:Q9XII1 STRING:Q9XII1 PaxDb:Q9XII1 PRIDE:Q9XII1
            EnsemblPlants:AT2G16070.2 GeneID:816104 KEGG:ath:AT2G16070
            TAIR:At2g16070 eggNOG:NOG241472 HOGENOM:HOG000242113
            InParanoid:Q9XII1 OMA:SQIDRSR PhylomeDB:Q9XII1
            ProtClustDB:CLSN2688151 Genevestigator:Q9XII1 GO:GO:0043572
            Uniprot:Q9XII1
        Length = 307

 Score = 448 (162.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
 Identities = 104/242 (42%), Positives = 139/242 (57%)

Query:    45 RLLSIHQALEXXXXXXXXXXXXXXXXRYDREVALAEIEFSRKMLLEKLKEYRGEDLEVIH 104
             RLL I  ALE                +Y++++AL+EI++SRKMLLEKLKEY+G+D EV+ 
Sbjct:    75 RLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEKLKEYKGKDFEVLR 134

Query:   105 EASAFAGETVQHDNDXXXXXXXXXXXXXXTLEN--GYLSQFRYPRKSVQNGVITGELTKE 162
             E + FAGE V ++ND               L+N  GYLS     +KS  NG  +G +   
Sbjct:   135 ETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKSDANGFGSGHV--- 191

Query:   163 GNKNIYESERNQVQTGSTTSRKGFGHFISSLAKTLLPLVGVVYVLNMSGVAQNLGKKSAP 222
               +N  E+E      GS  S  G   F+ S+AK +LP++GV+ +L+ SG    + K+ A 
Sbjct:   192 --RN--EAEAKSPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSASGYGPEMRKRGAS 247

Query:   223 LKFLGIFRQPVIDEKRSVFNVQCPPGKVLVVEGGEARCIVKERVEIPFDSVAVKPDINYG 282
             L   G+        KR+  N QCPPGKVLV+E GEARC+VKERVEIPFDSV  K D+ YG
Sbjct:   248 LNLFGLLPHRATRGKRTP-N-QCPPGKVLVIEDGEARCLVKERVEIPFDSVVAKRDVTYG 305

Query:   283 SG 284
              G
Sbjct:   306 YG 307

 Score = 48 (22.0 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query:     1 AAELRLKINKCIHKAS 16
             A ELRLKI+ CI  +S
Sbjct:    14 ATELRLKISDCIDNSS 29


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      284       232   0.00085  113 3  11 22  0.44    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  156 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.83u 0.10s 18.93t   Elapsed:  00:00:04
  Total cpu time:  18.83u 0.10s 18.93t   Elapsed:  00:00:04
  Start:  Tue May 21 04:26:19 2013   End:  Tue May 21 04:26:23 2013

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