Query         047677
Match_columns 200
No_of_seqs    141 out of 1891
Neff          10.6
Searched_HMMs 46136
Date          Fri Mar 29 13:32:28 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047677.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047677hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0581 Mitogen-activated prot 100.0 2.9E-34 6.2E-39  213.6   8.0  150    1-165   186-335 (364)
  2 KOG0192 Tyrosine kinase specif 100.0 1.4E-32 3.1E-37  211.6  10.3  156    1-175   150-309 (362)
  3 KOG0575 Polo-like serine/threo 100.0 6.3E-33 1.4E-37  217.4   8.0  144    1-165   126-269 (592)
  4 KOG0591 NIMA (never in mitosis 100.0 4.6E-32   1E-36  195.6   7.6  150    1-168   132-284 (375)
  5 KOG0197 Tyrosine kinases [Sign 100.0 5.5E-32 1.2E-36  209.4   6.5  153    1-173   311-465 (468)
  6 cd05102 PTKc_VEGFR3 Catalytic  100.0 3.2E-31 6.9E-36  205.1   9.5  154    1-171   182-336 (338)
  7 KOG0615 Serine/threonine prote 100.0 3.2E-32 6.9E-37  205.0   3.3  145    1-165   284-437 (475)
  8 KOG0198 MEKK and related serin 100.0 5.9E-32 1.3E-36  202.9   4.5  152    1-168   125-279 (313)
  9 KOG0592 3-phosphoinositide-dep 100.0 1.4E-31 3.1E-36  207.5   6.6  144    1-165   182-338 (604)
 10 KOG0578 p21-activated serine/t 100.0 6.4E-31 1.4E-35  204.7   8.2  145    2-164   378-522 (550)
 11 KOG0582 Ste20-like serine/thre 100.0 1.3E-30 2.9E-35  198.1   9.4  165    1-175   134-305 (516)
 12 KOG0598 Ribosomal protein S6 k 100.0 2.6E-31 5.7E-36  197.7   5.3  136    2-157   134-269 (357)
 13 KOG1187 Serine/threonine prote 100.0   9E-30   2E-34  197.0  12.8  169    1-172   182-355 (361)
 14 cd05048 PTKc_Ror Catalytic Dom 100.0 2.7E-30 5.8E-35  195.1   8.6  151    1-169   132-283 (283)
 15 KOG0593 Predicted protein kina 100.0 2.5E-30 5.3E-35  188.4   7.6  158    1-164   109-283 (396)
 16 KOG0661 MAPK related serine/th 100.0 3.2E-30 6.9E-35  197.3   8.2  159    1-165   118-291 (538)
 17 KOG0201 Serine/threonine prote 100.0 3.4E-30 7.4E-35  195.3   7.6  143    2-165   120-263 (467)
 18 cd05091 PTKc_Ror2 Catalytic do 100.0 4.9E-30 1.1E-34  193.8   7.3  150    1-168   132-282 (283)
 19 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-29 2.4E-34  196.5   9.0  155    1-172   181-336 (337)
 20 cd05093 PTKc_TrkB Catalytic do 100.0 8.1E-30 1.8E-34  193.2   7.9  155    1-173   128-283 (288)
 21 cd05075 PTKc_Axl Catalytic dom 100.0 9.2E-30   2E-34  191.1   8.0  151    1-169   120-271 (272)
 22 cd05106 PTKc_CSF-1R Catalytic  100.0 1.2E-29 2.5E-34  198.8   8.9  153    1-170   220-373 (374)
 23 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-29 2.6E-34  192.5   8.4  154    1-172   131-285 (291)
 24 KOG0193 Serine/threonine prote 100.0 1.2E-29 2.5E-34  199.1   7.8  170    1-184   496-669 (678)
 25 KOG0596 Dual specificity; seri 100.0 1.6E-29 3.5E-34  196.6   8.4  145    1-165   468-627 (677)
 26 PHA02882 putative serine/threo 100.0   4E-29 8.7E-34  190.0  10.2  156    1-167   134-294 (294)
 27 KOG0658 Glycogen synthase kina 100.0 3.2E-29 6.9E-34  186.4   9.3  165    1-172   133-315 (364)
 28 cd05035 PTKc_Axl_like Catalyti 100.0 3.2E-29 6.9E-34  188.2   9.5  151    1-169   121-272 (273)
 29 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-29 5.3E-34  189.6   8.8  150    1-168   130-280 (280)
 30 cd05108 PTKc_EGFR Catalytic do 100.0 3.2E-29   7E-34  192.3   9.2  157    1-175   117-274 (316)
 31 PTZ00283 serine/threonine prot 100.0 1.2E-29 2.7E-34  204.8   7.1  147    1-165   151-297 (496)
 32 cd05109 PTKc_HER2 Catalytic do 100.0 4.7E-29   1E-33  188.1   9.6  155    1-173   117-272 (279)
 33 cd05104 PTKc_Kit Catalytic dom 100.0 3.5E-29 7.6E-34  196.2   9.0  152    1-169   222-374 (375)
 34 KOG0583 Serine/threonine prote 100.0 2.1E-29 4.6E-34  195.4   7.6  150    1-171   128-280 (370)
 35 cd05096 PTKc_DDR1 Catalytic do 100.0 5.4E-29 1.2E-33  190.0   9.3  157    1-168   146-304 (304)
 36 PTZ00267 NIMA-related protein  100.0 2.8E-29 6.1E-34  202.3   7.9  146    1-164   177-322 (478)
 37 PHA02988 hypothetical protein; 100.0 3.4E-29 7.4E-34  189.4   7.8  150    1-171   130-281 (283)
 38 KOG0659 Cdk activating kinase  100.0 6.3E-29 1.4E-33  177.9   8.6  159    1-165   109-281 (318)
 39 KOG0660 Mitogen-activated prot 100.0 4.1E-29   9E-34  185.5   7.9  160    1-165   133-310 (359)
 40 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-29 3.2E-34  194.7   5.7  143    1-164   103-250 (323)
 41 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.8E-29 1.3E-33  187.9   8.6  166    1-170   115-282 (283)
 42 cd05111 PTK_HER3 Pseudokinase  100.0 9.2E-29   2E-33  186.6   9.4  155    1-173   117-272 (279)
 43 cd07862 STKc_CDK6 Catalytic do 100.0 2.2E-29 4.7E-34  190.8   6.0  156    1-164   118-286 (290)
 44 KOG0033 Ca2+/calmodulin-depend 100.0 5.9E-29 1.3E-33  176.7   7.6  143    1-164   118-266 (355)
 45 cd05053 PTKc_FGFR Catalytic do 100.0 4.3E-29 9.3E-34  189.5   7.4  151    1-169   140-291 (293)
 46 cd05092 PTKc_TrkA Catalytic do 100.0 5.2E-29 1.1E-33  188.0   7.7  150    1-168   130-280 (280)
 47 cd05062 PTKc_IGF-1R Catalytic  100.0 4.1E-29 8.8E-34  188.3   7.1  150    1-168   127-277 (277)
 48 KOG2345 Serine/threonine prote 100.0 4.7E-29   1E-33  177.0   6.9  153    1-170   135-301 (302)
 49 cd05116 PTKc_Syk Catalytic dom 100.0   1E-28 2.2E-33  184.2   8.5  151    1-169   103-255 (257)
 50 cd05631 STKc_GRK4 Catalytic do 100.0   6E-29 1.3E-33  188.2   7.1  146    1-164   110-260 (285)
 51 cd05045 PTKc_RET Catalytic dom 100.0 7.8E-29 1.7E-33  187.9   7.7  154    1-172   135-289 (290)
 52 cd05032 PTKc_InsR_like Catalyt 100.0 7.7E-29 1.7E-33  186.6   7.3  150    1-168   127-277 (277)
 53 cd05052 PTKc_Abl Catalytic dom 100.0 1.7E-28 3.6E-33  183.6   8.9  150    1-169   112-262 (263)
 54 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-28   3E-33  187.7   8.5  166    1-184   117-283 (303)
 55 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-28 3.8E-33  187.2   9.0  155    1-173   145-300 (304)
 56 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-28 2.7E-33  186.1   7.9  150    1-168   132-282 (283)
 57 PHA03212 serine/threonine kina 100.0 2.5E-28 5.3E-33  192.2   9.7  160    1-164   190-375 (391)
 58 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-28   4E-33  187.0   8.7  159    1-164   111-287 (303)
 59 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-28 5.6E-33  182.8   9.0  151    1-169   114-265 (266)
 60 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-28 3.9E-33  183.1   7.8  150    1-169   111-261 (261)
 61 cd08228 STKc_Nek6 Catalytic do 100.0 5.2E-28 1.1E-32  181.1  10.3  152    1-170   114-266 (267)
 62 cd05043 PTK_Ryk Pseudokinase d 100.0 1.8E-28 3.9E-33  185.0   7.8  153    1-171   125-278 (280)
 63 cd05089 PTKc_Tie1 Catalytic do 100.0 2.1E-28 4.6E-33  186.2   8.2  153    1-174   127-280 (297)
 64 KOG1026 Nerve growth factor re 100.0 5.2E-29 1.1E-33  202.0   5.0  156    1-174   611-767 (774)
 65 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-28 5.3E-33  185.1   8.4  157    1-175   127-284 (288)
 66 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.6E-28 5.6E-33  187.1   8.6  154    1-172   142-296 (314)
 67 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-28 4.9E-33  181.7   8.1  149    1-167   102-251 (252)
 68 cd05068 PTKc_Frk_like Catalyti 100.0 4.6E-28   1E-32  181.0   9.7  150    1-169   111-261 (261)
 69 KOG0594 Protein kinase PCTAIRE 100.0 1.7E-28 3.6E-33  182.2   7.1  159    1-165   128-302 (323)
 70 cd05055 PTKc_PDGFR Catalytic d 100.0 2.7E-28 5.9E-33  186.1   8.4  152    1-169   149-301 (302)
 71 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-28 2.3E-33  190.3   6.2  144    1-165   103-251 (328)
 72 cd07868 STKc_CDK8 Catalytic do 100.0 6.5E-28 1.4E-32  185.1  10.5   98    1-101   116-219 (317)
 73 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-28 2.5E-33  190.7   6.3  160    1-165   111-290 (338)
 74 cd05585 STKc_YPK1_like Catalyt 100.0   6E-29 1.3E-33  190.5   4.7  144    1-165   101-244 (312)
 75 KOG0983 Mitogen-activated prot 100.0 2.7E-28 5.8E-33  175.8   7.7  147    2-165   200-349 (391)
 76 cd05058 PTKc_Met_Ron Catalytic 100.0 2.9E-28 6.4E-33  182.0   8.3  152    1-170   106-260 (262)
 77 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.1E-28 4.4E-33  185.5   7.5  158    1-164   111-284 (288)
 78 cd07848 STKc_CDKL5 Catalytic d 100.0 2.5E-28 5.5E-33  184.7   8.0  159    1-164   108-283 (287)
 79 cd05060 PTKc_Syk_like Catalyti  99.9 4.9E-28 1.1E-32  180.4   9.0  152    1-170   103-256 (257)
 80 cd05082 PTKc_Csk Catalytic dom  99.9   4E-28 8.7E-33  180.8   8.5  146    1-169   110-256 (256)
 81 PTZ00284 protein kinase; Provi  99.9 2.9E-28 6.2E-33  196.1   8.1  154    1-164   239-437 (467)
 82 cd05592 STKc_nPKC_theta_delta   99.9 1.8E-28   4E-33  188.1   6.7  140    1-161   104-243 (316)
 83 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 1.1E-27 2.4E-32  179.3  10.7  152    1-170   114-266 (267)
 84 cd07876 STKc_JNK2 Catalytic do  99.9 4.6E-28   1E-32  188.9   8.9  158    1-165   131-315 (359)
 85 cd05620 STKc_nPKC_delta Cataly  99.9 1.7E-28 3.7E-33  188.3   6.3  142    1-163   104-246 (316)
 86 KOG0616 cAMP-dependent protein  99.9 1.8E-28   4E-33  178.0   6.0  130    1-156   152-283 (355)
 87 cd00192 PTKc Catalytic domain   99.9 4.9E-28 1.1E-32  180.3   8.4  149    1-167   113-262 (262)
 88 PHA03207 serine/threonine kina  99.9 3.8E-28 8.2E-33  191.5   8.2  162    1-165   193-375 (392)
 89 cd05071 PTKc_Src Catalytic dom  99.9   8E-28 1.7E-32  179.9   9.5  150    1-169   110-260 (262)
 90 cd08229 STKc_Nek7 Catalytic do  99.9 1.3E-27 2.9E-32  179.0  10.7  152    1-170   114-266 (267)
 91 cd05590 STKc_nPKC_eta Catalyti  99.9 1.5E-28 3.3E-33  188.9   5.8  138    1-159   104-241 (320)
 92 PLN00034 mitogen-activated pro  99.9 4.2E-28 9.1E-33  188.8   8.2  148    1-165   176-328 (353)
 93 cd05105 PTKc_PDGFR_alpha Catal  99.9 5.6E-28 1.2E-32  190.5   8.9  154    1-171   245-399 (400)
 94 cd05036 PTKc_ALK_LTK Catalytic  99.9 3.4E-28 7.3E-33  183.3   7.4  149    1-167   124-276 (277)
 95 cd05051 PTKc_DDR Catalytic dom  99.9 4.2E-28 9.1E-33  184.3   7.9  156    1-167   138-295 (296)
 96 cd05595 STKc_PKB_beta Catalyti  99.9 1.9E-28   4E-33  188.6   6.0  143    1-164   103-250 (323)
 97 cd07874 STKc_JNK3 Catalytic do  99.9   5E-28 1.1E-32  188.5   8.4  158    1-165   127-311 (355)
 98 cd05064 PTKc_EphR_A10 Catalyti  99.9 4.6E-28   1E-32  181.6   7.9  150    1-169   115-265 (266)
 99 cd05044 PTKc_c-ros Catalytic d  99.9   8E-28 1.7E-32  180.3   9.1  150    1-168   114-269 (269)
100 cd05050 PTKc_Musk Catalytic do  99.9 4.2E-28 9.1E-33  183.7   7.7  150    1-168   138-288 (288)
101 cd05098 PTKc_FGFR1 Catalytic d  99.9   4E-28 8.8E-33  185.5   7.5  155    1-173   148-303 (307)
102 cd05069 PTKc_Yes Catalytic dom  99.9 8.4E-28 1.8E-32  179.5   9.1  149    1-168   110-259 (260)
103 cd05114 PTKc_Tec_Rlk Catalytic  99.9 4.6E-28   1E-32  180.5   7.6  148    1-167   108-256 (256)
104 cd05148 PTKc_Srm_Brk Catalytic  99.9 5.5E-28 1.2E-32  180.5   8.0  149    1-169   112-261 (261)
105 cd05074 PTKc_Tyro3 Catalytic d  99.9 5.5E-28 1.2E-32  181.6   8.0  151    1-169   121-272 (273)
106 PTZ00036 glycogen synthase kin  99.9 3.8E-28 8.3E-33  193.8   7.5  157    1-164   178-350 (440)
107 cd05047 PTKc_Tie Catalytic dom  99.9 5.7E-28 1.2E-32  181.4   8.0  149    1-170   120-269 (270)
108 cd07863 STKc_CDK4 Catalytic do  99.9 4.8E-28   1E-32  183.3   7.6  157    1-164   116-284 (288)
109 cd05097 PTKc_DDR_like Catalyti  99.9 6.7E-28 1.5E-32  183.2   8.4  156    1-167   137-294 (295)
110 KOG0600 Cdc2-related protein k  99.9 4.3E-28 9.4E-33  186.8   7.3  161    1-165   226-400 (560)
111 cd05100 PTKc_FGFR3 Catalytic d  99.9 7.8E-28 1.7E-32  186.0   8.8  155    1-173   142-297 (334)
112 cd05594 STKc_PKB_alpha Catalyt  99.9 1.1E-28 2.3E-33  190.1   3.9  144    1-165   103-252 (325)
113 cd05103 PTKc_VEGFR2 Catalytic   99.9 8.8E-28 1.9E-32  186.3   9.1  155    1-172   187-342 (343)
114 cd05614 STKc_MSK2_N N-terminal  99.9 2.3E-28 4.9E-33  188.8   5.7  148    1-164   113-266 (332)
115 cd05591 STKc_nPKC_epsilon Cata  99.9   2E-28 4.4E-33  188.3   5.4  144    1-165   104-254 (321)
116 cd05070 PTKc_Fyn_Yrk Catalytic  99.9 7.9E-28 1.7E-32  179.6   8.4  149    1-168   110-259 (260)
117 cd05570 STKc_PKC Catalytic dom  99.9 2.9E-28 6.2E-33  187.2   6.1  143    1-164   104-251 (318)
118 cd05113 PTKc_Btk_Bmx Catalytic  99.9 6.4E-28 1.4E-32  179.9   7.8  148    1-167   108-256 (256)
119 cd05584 STKc_p70S6K Catalytic   99.9 3.3E-28 7.1E-33  187.3   6.3  143    1-164   108-255 (323)
120 cd05619 STKc_nPKC_theta Cataly  99.9 3.8E-28 8.1E-33  186.4   6.6  142    1-163   104-246 (316)
121 cd05095 PTKc_DDR2 Catalytic do  99.9 9.1E-28   2E-32  182.6   8.7  157    1-168   138-296 (296)
122 cd05607 STKc_GRK7 Catalytic do  99.9 5.5E-28 1.2E-32  182.2   7.4  150    1-167   103-252 (277)
123 cd05115 PTKc_Zap-70 Catalytic   99.9 8.9E-28 1.9E-32  179.2   8.4  151    1-169   103-255 (257)
124 cd05589 STKc_PKN Catalytic dom  99.9 4.3E-28 9.3E-33  186.7   6.7  143    1-164   109-256 (324)
125 cd07875 STKc_JNK1 Catalytic do  99.9 6.1E-28 1.3E-32  188.6   7.6  158    1-165   134-318 (364)
126 cd05057 PTKc_EGFR_like Catalyt  99.9 1.5E-27 3.3E-32  179.9   9.4  156    1-174   117-273 (279)
127 KOG4721 Serine/threonine prote  99.9 1.9E-28 4.2E-33  191.6   4.5  151    1-171   220-370 (904)
128 cd05587 STKc_cPKC Catalytic do  99.9 4.3E-28 9.3E-33  186.7   6.4  138    1-159   109-246 (324)
129 cd08529 STKc_FA2-like Catalyti  99.9 1.4E-27   3E-32  177.7   8.8  145    1-165   109-253 (256)
130 cd05612 STKc_PRKX_like Catalyt  99.9 3.7E-28 8.1E-33  184.4   5.8  141    1-165   109-254 (291)
131 KOG0599 Phosphorylase kinase g  99.9 2.6E-28 5.6E-33  176.0   4.6  144    1-165   131-283 (411)
132 PTZ00263 protein kinase A cata  99.9   3E-28 6.4E-33  187.9   5.3  140    1-164   126-270 (329)
133 cd05088 PTKc_Tie2 Catalytic do  99.9 6.6E-28 1.4E-32  184.0   7.2  153    1-174   132-285 (303)
134 cd05618 STKc_aPKC_iota Catalyt  99.9 4.3E-28 9.3E-33  187.1   6.1  144    1-159   104-250 (329)
135 PF07714 Pkinase_Tyr:  Protein   99.9 7.1E-29 1.5E-33  185.4   1.6  148    1-166   111-259 (259)
136 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.6E-27 3.6E-32  178.6   9.0  151    1-169   115-267 (268)
137 cd05608 STKc_GRK1 Catalytic do  99.9 7.2E-28 1.6E-32  181.9   7.1  147    1-164   105-256 (280)
138 cd06649 PKc_MEK2 Catalytic dom  99.9 1.7E-27 3.7E-32  183.9   9.2  157    1-165   111-301 (331)
139 KOG1989 ARK protein kinase fam  99.9   1E-27 2.3E-32  194.9   8.3  160    1-180   152-322 (738)
140 cd05056 PTKc_FAK Catalytic dom  99.9 2.1E-27 4.5E-32  178.3   9.4  152    1-171   115-267 (270)
141 cd05616 STKc_cPKC_beta Catalyt  99.9 3.9E-28 8.5E-33  186.8   5.5  138    1-159   109-246 (323)
142 cd08223 STKc_Nek4 Catalytic do  99.9 1.7E-27 3.7E-32  177.3   8.8  144    1-164   110-253 (257)
143 KOG0597 Serine-threonine prote  99.9 7.1E-28 1.5E-32  188.2   6.9  143    1-164   108-250 (808)
144 KOG0589 Serine/threonine prote  99.9 2.9E-28 6.3E-33  188.0   4.7  145    1-165   114-258 (426)
145 cd05602 STKc_SGK1 Catalytic do  99.9 2.1E-28 4.5E-33  188.5   3.8  142    1-163   104-245 (325)
146 cd05067 PTKc_Lck_Blk Catalytic  99.9 1.7E-27 3.6E-32  177.9   8.6  149    1-168   110-259 (260)
147 cd07867 STKc_CDC2L6 Catalytic   99.9 7.4E-28 1.6E-32  184.6   6.8   98    1-101   116-219 (317)
148 PHA03211 serine/threonine kina  99.9 1.6E-27 3.5E-32  190.3   8.8  162    1-165   268-455 (461)
149 cd08219 STKc_Nek3 Catalytic do  99.9 9.4E-28   2E-32  178.7   6.7  145    1-165   108-252 (255)
150 cd05059 PTKc_Tec_like Catalyti  99.9 1.2E-27 2.5E-32  178.4   7.2  147    1-166   108-255 (256)
151 cd05588 STKc_aPKC Catalytic do  99.9   8E-28 1.7E-32  185.6   6.4  148    1-163   104-260 (329)
152 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 1.2E-27 2.7E-32  180.9   7.2  165    1-169   117-283 (284)
153 cd05575 STKc_SGK Catalytic dom  99.9 4.1E-28   9E-33  186.7   4.7  139    1-160   104-242 (323)
154 cd05041 PTKc_Fes_like Catalyti  99.9 2.3E-27 4.9E-32  176.2   8.5  150    1-168   101-251 (251)
155 cd05617 STKc_aPKC_zeta Catalyt  99.9 8.4E-28 1.8E-32  185.3   6.3  144    1-159   104-248 (327)
156 KOG0588 Serine/threonine prote  99.9 8.9E-28 1.9E-32  190.3   6.5  143    1-165   120-263 (786)
157 cd05600 STKc_Sid2p_Dbf2p Catal  99.9 5.7E-28 1.2E-32  186.7   5.1  149    1-165   109-257 (333)
158 PHA03209 serine/threonine kina  99.9   5E-27 1.1E-31  183.0  10.4   92    1-98    165-256 (357)
159 cd05040 PTKc_Ack_like Catalyti  99.9 2.3E-27   5E-32  176.7   8.0  150    1-167   105-256 (257)
160 cd06619 PKc_MKK5 Catalytic dom  99.9 3.6E-27 7.7E-32  177.9   9.0  149    1-165   103-253 (279)
161 cd07878 STKc_p38beta_MAPK11 Ca  99.9 2.2E-27 4.8E-32  184.1   8.0  156    1-165   126-298 (343)
162 cd05083 PTKc_Chk Catalytic dom  99.9 3.6E-27 7.7E-32  175.5   8.6  145    1-168   108-253 (254)
163 KOG1095 Protein tyrosine kinas  99.9 8.9E-28 1.9E-32  200.8   5.7  156    1-174   810-966 (1025)
164 cd05073 PTKc_Hck Catalytic dom  99.9 4.2E-27 9.2E-32  175.7   8.9  149    1-168   110-259 (260)
165 KOG4645 MAPKKK (MAP kinase kin  99.9 4.2E-28 9.1E-33  203.6   3.6  148    1-165  1342-1494(1509)
166 KOG0663 Protein kinase PITSLRE  99.9 4.8E-27   1E-31  173.2   8.8  159    1-165   185-361 (419)
167 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9 2.4E-27 5.3E-32  179.1   7.5  163    1-169   116-283 (284)
168 cd05107 PTKc_PDGFR_beta Cataly  99.9 2.8E-27 6.1E-32  186.5   8.1  152    1-169   247-399 (401)
169 cd05603 STKc_SGK2 Catalytic do  99.9 6.8E-28 1.5E-32  185.3   4.3  139    1-160   104-242 (321)
170 PTZ00426 cAMP-dependent protei  99.9 9.6E-28 2.1E-32  185.8   5.2  141    1-165   139-284 (340)
171 cd05085 PTKc_Fer Catalytic dom  99.9 3.7E-27 7.9E-32  175.0   8.1  148    1-167   101-249 (250)
172 cd05586 STKc_Sck1_like Catalyt  99.9 3.1E-28 6.8E-33  187.9   2.4  144    1-164   104-252 (330)
173 KOG0694 Serine/threonine prote  99.9 2.5E-27 5.4E-32  188.3   7.5  137    2-159   477-613 (694)
174 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9   4E-27 8.7E-32  176.7   8.3  153    1-167   108-268 (269)
175 cd05573 STKc_ROCK_NDR_like Cat  99.9 8.8E-28 1.9E-32  186.7   4.7  149    1-165   109-285 (350)
176 cd06628 STKc_MAPKKK_Byr2_like   99.9 2.9E-27 6.3E-32  177.1   7.3  146    1-164   114-263 (267)
177 cd05034 PTKc_Src_like Catalyti  99.9   3E-27 6.5E-32  176.5   7.4  149    1-168   111-260 (261)
178 cd05039 PTKc_Csk_like Catalyti  99.9 4.3E-27 9.3E-32  175.2   8.2  145    1-168   110-255 (256)
179 KOG0585 Ca2+/calmodulin-depend  99.9 1.6E-27 3.6E-32  182.6   5.9  147    1-165   218-372 (576)
180 cd05065 PTKc_EphR_B Catalytic   99.9 5.9E-27 1.3E-31  175.7   8.5  151    1-169   114-268 (269)
181 KOG0595 Serine/threonine-prote  99.9 1.4E-27   3E-32  179.9   4.8   96    1-102   117-218 (429)
182 cd06625 STKc_MEKK3_like Cataly  99.9 5.4E-27 1.2E-31  175.2   8.0  148    1-165   112-260 (263)
183 cd05604 STKc_SGK3 Catalytic do  99.9 5.2E-28 1.1E-32  186.3   2.5  141    1-162   104-244 (325)
184 cd06654 STKc_PAK1 Catalytic do  99.9 5.2E-27 1.1E-31  178.5   7.8  147    1-165   124-270 (296)
185 cd05066 PTKc_EphR_A Catalytic   99.9 7.8E-27 1.7E-31  175.0   8.6  151    1-169   114-266 (267)
186 cd07872 STKc_PCTAIRE2 Catalyti  99.9 4.7E-27   1E-31  179.7   7.5  158    1-164   112-285 (309)
187 cd05042 PTKc_Aatyk Catalytic d  99.9 4.1E-27 8.8E-32  176.6   7.1  153    1-167   108-268 (269)
188 cd07839 STKc_CDK5 Catalytic do  99.9 6.5E-27 1.4E-31  176.7   8.2  159    1-164   107-280 (284)
189 cd05601 STKc_CRIK Catalytic do  99.9 1.2E-27 2.5E-32  184.7   4.0  147    1-164   110-262 (330)
190 cd05605 STKc_GRK4_like Catalyt  99.9 3.8E-27 8.1E-32  178.4   6.7  147    1-165   110-261 (285)
191 smart00219 TyrKc Tyrosine kina  99.9 9.3E-27   2E-31  173.2   8.7  147    1-166   111-258 (258)
192 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 9.1E-27   2E-31  174.3   8.4  141    1-167   113-262 (262)
193 cd06643 STKc_SLK Catalytic dom  99.9 8.6E-27 1.9E-31  176.0   8.3  147    1-165   111-262 (282)
194 cd08528 STKc_Nek10 Catalytic d  99.9 9.2E-27   2E-31  174.6   8.3  147    1-167   121-268 (269)
195 cd06637 STKc_TNIK Catalytic do  99.9 5.3E-27 1.1E-31  176.2   7.0  145    1-164   119-268 (272)
196 KOG0667 Dual-specificity tyros  99.9   1E-26 2.2E-31  184.2   8.8   92    1-100   297-390 (586)
197 cd06646 STKc_MAP4K5 Catalytic   99.9 6.3E-27 1.4E-31  175.3   7.4  149    1-165   114-265 (267)
198 cd05038 PTKc_Jak_rpt2 Catalyti  99.9   4E-27 8.8E-32  177.7   6.3  165    1-169   117-283 (284)
199 cd07853 STKc_NLK Catalytic dom  99.9 5.1E-27 1.1E-31  183.9   7.1  159    1-165   111-288 (372)
200 KOG0604 MAP kinase-activated p  99.9 8.1E-27 1.8E-31  169.9   7.3  147    1-165   169-322 (400)
201 PHA03210 serine/threonine kina  99.9 2.5E-26 5.4E-31  186.0  10.8  161    1-165   275-454 (501)
202 cd06658 STKc_PAK5 Catalytic do  99.9 9.2E-27   2E-31  176.9   7.7  147    1-165   126-272 (292)
203 cd05582 STKc_RSK_N N-terminal   99.9 8.5E-28 1.8E-32  184.6   2.0  140    1-161   106-245 (318)
204 PF00069 Pkinase:  Protein kina  99.9 1.5E-26 3.2E-31  172.4   8.2  150    1-164   106-256 (260)
205 cd06612 STKc_MST1_2 Catalytic   99.9 1.6E-26 3.4E-31  172.0   8.3  146    1-164   107-252 (256)
206 cd06650 PKc_MEK1 Catalytic dom  99.9 1.9E-26 4.1E-31  178.2   9.0   95    1-101   111-205 (333)
207 cd05596 STKc_ROCK Catalytic do  99.9 6.3E-27 1.4E-31  183.2   6.4  149    1-165   150-304 (370)
208 cd05615 STKc_cPKC_alpha Cataly  99.9 5.6E-27 1.2E-31  180.4   6.0  138    1-159   109-246 (323)
209 cd07861 STKc_CDK1_euk Catalyti  99.9 7.5E-27 1.6E-31  176.4   6.5  158    1-164   109-281 (285)
210 cd05086 PTKc_Aatyk2 Catalytic   99.9 6.3E-26 1.4E-30  170.2  11.3  153    1-167   107-267 (268)
211 cd06613 STKc_MAP4K3_like Catal  99.9 2.6E-26 5.7E-31  171.3   9.2  148    1-164   109-259 (262)
212 cd06609 STKc_MST3_like Catalyt  99.9 1.4E-26   3E-31  174.1   7.8  145    1-164   106-250 (274)
213 KOG4279 Serine/threonine prote  99.9 3.8E-27 8.2E-32  188.2   4.9  146    1-164   683-831 (1226)
214 cd06642 STKc_STK25-YSK1 Cataly  99.9 2.1E-26 4.5E-31  173.5   8.7  145    1-165   109-253 (277)
215 cd06659 STKc_PAK6 Catalytic do  99.9 1.1E-26 2.5E-31  176.8   7.3  147    1-165   125-271 (297)
216 cd05112 PTKc_Itk Catalytic dom  99.9 1.3E-26 2.8E-31  172.6   7.3  148    1-167   108-256 (256)
217 cd06644 STKc_STK10_LOK Catalyt  99.9 3.8E-26 8.3E-31  173.3  10.0  146    1-164   118-268 (292)
218 cd08221 STKc_Nek9 Catalytic do  99.9   2E-26 4.4E-31  171.5   8.3  145    1-165   109-253 (256)
219 cd06655 STKc_PAK2 Catalytic do  99.9 1.5E-26 3.2E-31  176.0   7.6  146    1-164   123-268 (296)
220 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 2.9E-26 6.2E-31  170.8   8.7  141    1-167   109-259 (259)
221 cd08217 STKc_Nek2 Catalytic do  99.9 2.8E-26   6E-31  171.2   8.4  148    1-165   113-262 (265)
222 cd06636 STKc_MAP4K4_6 Catalyti  99.9 1.4E-26 3.1E-31  174.8   7.0  145    1-164   129-278 (282)
223 cd08218 STKc_Nek1 Catalytic do  99.9 1.4E-26 3.1E-31  172.4   6.8  144    1-164   109-252 (256)
224 cd06645 STKc_MAP4K3 Catalytic   99.9 2.2E-26 4.8E-31  172.4   7.8  148    1-164   114-264 (267)
225 cd05630 STKc_GRK6 Catalytic do  99.9   1E-26 2.2E-31  176.1   6.0  146    1-165   110-261 (285)
226 KOG4717 Serine/threonine prote  99.9 2.1E-26 4.6E-31  178.6   7.9  143    1-165   126-270 (864)
227 cd06640 STKc_MST4 Catalytic do  99.9 4.9E-26 1.1E-30  171.5   9.6  145    1-165   109-253 (277)
228 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 4.6E-26 9.9E-31  172.3   9.4  146    1-164   110-261 (286)
229 cd06605 PKc_MAPKK Catalytic do  99.9 3.7E-26   8E-31  170.9   8.7  147    1-164   108-256 (265)
230 cd07873 STKc_PCTAIRE1 Catalyti  99.9 1.1E-26 2.3E-31  177.1   5.9  157    1-164   112-285 (301)
231 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9   2E-26 4.3E-31  171.9   7.1  141    1-167   108-258 (258)
232 smart00750 KIND kinase non-cat  99.9   2E-25 4.4E-30  157.4  11.7  143    1-169    25-169 (176)
233 cd06651 STKc_MEKK3 Catalytic d  99.9 3.1E-26 6.8E-31  171.6   7.9  146    1-164   114-260 (266)
234 KOG0671 LAMMER dual specificit  99.9 1.3E-26 2.8E-31  173.4   5.5  156    1-164   200-405 (415)
235 KOG0603 Ribosomal protein S6 k  99.9 2.6E-26 5.7E-31  181.3   7.6  140    1-165   423-563 (612)
236 cd06624 STKc_ASK Catalytic dom  99.9 4.1E-26 8.9E-31  171.1   8.4  146    1-164   116-264 (268)
237 cd05632 STKc_GRK5 Catalytic do  99.9 2.8E-26 6.2E-31  173.6   7.3  146    1-164   110-260 (285)
238 cd06656 STKc_PAK3 Catalytic do  99.9 2.7E-26 5.8E-31  174.7   7.2  146    1-164   123-268 (297)
239 cd06616 PKc_MKK4 Catalytic dom  99.9 1.9E-26 4.1E-31  174.6   6.3  149    1-165   115-267 (288)
240 cd06639 STKc_myosinIIIB Cataly  99.9 3.8E-26 8.2E-31  173.2   7.9  146    1-164   136-286 (291)
241 cd06648 STKc_PAK_II Catalytic   99.9 3.6E-26 7.8E-31  173.0   7.7  146    1-164   123-268 (285)
242 cd06608 STKc_myosinIII_like Ca  99.9 4.1E-26 8.8E-31  171.3   7.7  146    1-164   121-271 (275)
243 KOG1035 eIF-2alpha kinase GCN2  99.9 4.3E-26 9.3E-31  190.6   8.5  144    1-164   705-870 (1351)
244 cd07850 STKc_JNK Catalytic dom  99.9 6.2E-26 1.3E-30  176.6   8.8  158    1-165   126-311 (353)
245 cd08227 PK_STRAD_alpha Pseudok  99.9 4.3E-26 9.4E-31  175.8   7.8  160    1-164   109-306 (327)
246 KOG0032 Ca2+/calmodulin-depend  99.9 6.5E-26 1.4E-30  176.1   8.8  144    1-165   143-293 (382)
247 cd06610 STKc_OSR1_SPAK Catalyt  99.9 4.9E-26 1.1E-30  170.3   7.8  149    1-164   110-263 (267)
248 cd05599 STKc_NDR_like Catalyti  99.9 1.8E-26 3.9E-31  180.3   5.7  148    1-164   109-295 (364)
249 KOG4257 Focal adhesion tyrosin  99.9 2.2E-26 4.7E-31  181.8   6.0  152    1-171   499-651 (974)
250 cd06631 STKc_YSK4 Catalytic do  99.9 3.9E-26 8.4E-31  170.9   7.1  148    1-164   110-261 (265)
251 cd07842 STKc_CDK8_like Catalyt  99.9 6.4E-26 1.4E-30  173.7   8.4  161    1-164   116-312 (316)
252 cd05633 STKc_GRK3 Catalytic do  99.9 3.6E-26 7.9E-31  172.5   6.8  145    1-165   105-255 (279)
253 PRK13184 pknD serine/threonine  99.9 6.3E-26 1.4E-30  190.3   8.8  155    1-171   121-292 (932)
254 cd06638 STKc_myosinIIIA Cataly  99.9 7.4E-26 1.6E-30  171.1   8.4  147    1-165   132-283 (286)
255 cd05621 STKc_ROCK2 Catalytic d  99.9   3E-26 6.5E-31  179.3   6.4  149    1-165   150-304 (370)
256 cd07847 STKc_CDKL1_4 Catalytic  99.9   6E-26 1.3E-30  171.5   7.8  158    1-164   108-282 (286)
257 cd05626 STKc_LATS2 Catalytic d  99.9 3.8E-26 8.3E-31  179.5   6.8  150    1-165   109-305 (381)
258 cd05625 STKc_LATS1 Catalytic d  99.9 2.5E-26 5.4E-31  180.6   5.6  148    1-164   109-304 (382)
259 PLN00113 leucine-rich repeat r  99.9 4.2E-25 9.2E-30  191.5  13.7  165    1-173   788-955 (968)
260 cd08530 STKc_CNK2-like Catalyt  99.9   9E-26 1.9E-30  167.8   8.2  142    1-164   111-252 (256)
261 cd05046 PTK_CCK4 Pseudokinase   99.9 7.9E-26 1.7E-30  170.1   8.0  150    1-168   125-275 (275)
262 cd05622 STKc_ROCK1 Catalytic d  99.9 4.6E-26   1E-30  178.4   6.9  149    1-165   150-304 (371)
263 cd05118 STKc_CMGC Catalytic do  99.9   1E-25 2.2E-30  169.9   8.6  158    1-164   106-279 (283)
264 cd07838 STKc_CDK4_6_like Catal  99.9 2.2E-25 4.7E-30  168.5  10.2  157    1-164   115-283 (287)
265 cd07870 STKc_PFTAIRE2 Catalyti  99.9 1.2E-25 2.5E-30  170.6   8.7  159    1-164   111-287 (291)
266 cd08216 PK_STRAD Pseudokinase   99.9 2.3E-25 4.9E-30  170.7  10.3  161    1-165   109-295 (314)
267 cd05122 PKc_STE Catalytic doma  99.9 9.1E-26   2E-30  167.1   7.7  145    1-164   106-250 (253)
268 cd07849 STKc_ERK1_2_like Catal  99.9 5.5E-26 1.2E-30  175.8   6.8  165    1-170   114-299 (336)
269 cd07860 STKc_CDK2_3 Catalytic   99.9 7.4E-26 1.6E-30  171.0   7.2  158    1-164   108-280 (284)
270 cd07831 STKc_MOK Catalytic dom  99.9 1.2E-25 2.5E-30  169.6   8.1  155    1-164   108-278 (282)
271 PLN00181 protein SPA1-RELATED;  99.9 8.8E-26 1.9E-30  191.8   8.2  144    1-164    88-264 (793)
272 cd07835 STKc_CDK1_like Catalyt  99.9 6.3E-26 1.4E-30  171.3   6.5  158    1-164   107-279 (283)
273 cd07843 STKc_CDC2L1 Catalytic   99.9 1.3E-25 2.8E-30  170.5   8.2  158    1-164   114-289 (293)
274 cd05628 STKc_NDR1 Catalytic do  99.9 6.9E-26 1.5E-30  177.0   6.8   98    1-101   109-239 (363)
275 cd06629 STKc_MAPKKK_Bck1_like   99.9 1.6E-25 3.4E-30  168.2   8.4  150    1-164   116-268 (272)
276 cd06623 PKc_MAPKK_plant_like C  99.9 1.8E-25 3.8E-30  167.0   8.6  148    1-165   107-256 (264)
277 PHA03390 pk1 serine/threonine-  99.9 2.4E-25 5.1E-30  167.1   9.2  143    1-164   117-261 (267)
278 cd05598 STKc_LATS Catalytic do  99.9 1.6E-26 3.4E-31  181.4   3.0  149    1-165   109-301 (376)
279 cd06917 STKc_NAK1_like Catalyt  99.9 1.4E-25   3E-30  168.9   8.0  145    1-164   109-254 (277)
280 cd08220 STKc_Nek8 Catalytic do  99.9 1.4E-25 3.1E-30  166.8   7.9  143    1-164   109-252 (256)
281 cd05574 STKc_phototropin_like   99.9 9.6E-26 2.1E-30  173.0   7.0  147    1-164   111-288 (316)
282 cd07852 STKc_MAPK15 Catalytic   99.9 1.7E-25 3.6E-30  173.1   8.3  161    1-165   115-295 (337)
283 cd06617 PKc_MKK3_6 Catalytic d  99.9 2.7E-25   6E-30  167.7   9.3  145    1-164   111-260 (283)
284 cd05609 STKc_MAST Catalytic do  99.9 8.8E-26 1.9E-30  172.4   6.6  155    1-171   109-276 (305)
285 KOG0605 NDR and related serine  99.9 3.7E-26 8.1E-31  177.3   4.6  138    3-158   251-435 (550)
286 cd07844 STKc_PCTAIRE_like Cata  99.9 2.1E-25 4.6E-30  169.1   8.6  159    1-164   111-287 (291)
287 KOG0986 G protein-coupled rece  99.9 5.8E-26 1.3E-30  173.4   5.4  141    2-160   296-436 (591)
288 cd05629 STKc_NDR_like_fungal C  99.9 4.9E-26 1.1E-30  178.6   5.2  149    1-165   109-305 (377)
289 cd07865 STKc_CDK9 Catalytic do  99.9 1.3E-25 2.9E-30  171.5   7.4  159    1-164   127-306 (310)
290 cd06632 STKc_MEKK1_plant Catal  99.9 1.3E-25 2.9E-30  167.1   7.0  144    1-164   110-254 (258)
291 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 1.8E-25   4E-30  168.3   7.7  141    1-167   125-274 (274)
292 cd07837 STKc_CdkB_plant Cataly  99.9 1.4E-25 2.9E-30  170.4   7.1  158    1-164   118-290 (295)
293 cd08215 STKc_Nek Catalytic dom  99.9 2.1E-25 4.6E-30  165.8   8.0  144    1-164   111-254 (258)
294 cd07841 STKc_CDK7 Catalytic do  99.9 3.2E-25 6.8E-30  168.7   9.0  158    1-165   110-282 (298)
295 cd06607 STKc_TAO Catalytic dom  99.9 4.5E-25 9.9E-30  168.6  10.0  142    1-165   123-267 (307)
296 cd05606 STKc_beta_ARK Catalyti  99.9 1.7E-25 3.7E-30  168.8   7.4  144    1-164   105-254 (278)
297 cd07845 STKc_CDK10 Catalytic d  99.9 2.4E-25 5.1E-30  170.3   8.1  158    1-165   116-290 (309)
298 PTZ00266 NIMA-related protein   99.9 8.4E-26 1.8E-30  190.5   6.1  152    1-170   126-302 (1021)
299 cd08225 STKc_Nek5 Catalytic do  99.9 1.4E-25 3.1E-30  166.9   6.5  144    1-164   109-253 (257)
300 KOG0610 Putative serine/threon  99.9 3.7E-25 7.9E-30  167.2   8.6  144    2-164   188-391 (459)
301 cd06652 STKc_MEKK2 Catalytic d  99.9 3.3E-25 7.2E-30  165.9   8.5  146    1-164   114-260 (265)
302 cd07834 STKc_MAPK Catalytic do  99.9 6.3E-25 1.4E-29  169.4  10.2  167    1-172   111-298 (330)
303 cd07858 STKc_TEY_MAPK_plant Ca  99.9 4.4E-25 9.5E-30  170.8   9.3  166    1-173   116-301 (337)
304 cd07855 STKc_ERK5 Catalytic do  99.9   5E-25 1.1E-29  170.3   9.5  161    1-165   115-294 (334)
305 cd05623 STKc_MRCK_alpha Cataly  99.9 1.3E-25 2.8E-30  173.5   6.1  150    1-165   110-266 (332)
306 cd06611 STKc_SLK_like Catalyti  99.9 2.7E-25 5.8E-30  167.7   7.7  147    1-165   111-262 (280)
307 cd05572 STKc_cGK_PKG Catalytic  99.9 4.2E-25 9.1E-30  165.0   8.7  146    1-164   101-251 (262)
308 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 8.2E-25 1.8E-29  165.7  10.3  153    1-164   113-265 (287)
309 cd06647 STKc_PAK_I Catalytic d  99.9 3.9E-25 8.5E-30  168.0   8.5  147    1-165   123-269 (293)
310 cd06618 PKc_MKK7 Catalytic dom  99.9 3.7E-25   8E-30  168.3   8.4  148    1-165   122-273 (296)
311 cd07879 STKc_p38delta_MAPK13 C  99.9 2.3E-25 4.9E-30  172.8   7.3  164    1-173   125-307 (342)
312 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 2.9E-25 6.4E-30  167.9   7.7  149    1-165   111-266 (284)
313 cd06615 PKc_MEK Catalytic doma  99.9 3.8E-25 8.2E-30  169.2   8.3  157    1-165   107-287 (308)
314 cd06657 STKc_PAK4 Catalytic do  99.9 2.9E-25 6.2E-30  168.7   7.6  146    1-164   124-269 (292)
315 cd07833 STKc_CDKL Catalytic do  99.9 3.9E-25 8.5E-30  167.2   8.2  159    1-164   108-284 (288)
316 cd07866 STKc_BUR1 Catalytic do  99.9 2.2E-25 4.8E-30  170.3   6.9  160    1-164   123-307 (311)
317 cd06614 STKc_PAK Catalytic dom  99.9 3.7E-25 8.1E-30  167.4   8.0  146    1-164   124-269 (286)
318 cd07857 STKc_MPK1 Catalytic do  99.9 2.4E-25 5.2E-30  171.9   7.1  160    1-164   113-291 (332)
319 cd05579 STKc_MAST_like Catalyt  99.9 1.7E-25 3.8E-30  166.9   5.9  150    1-167   101-256 (265)
320 cd06606 STKc_MAPKKK Catalytic   99.9 4.6E-25   1E-29  163.9   8.1  148    1-164   109-256 (260)
321 cd05577 STKc_GRK Catalytic dom  99.9 2.4E-25 5.3E-30  167.7   6.6  146    1-164   103-253 (277)
322 cd05611 STKc_Rim15_like Cataly  99.9   2E-25 4.3E-30  166.6   6.1  145    1-167   105-250 (260)
323 KOG0580 Serine/threonine prote  99.9 2.9E-25 6.3E-30  157.0   6.5  142    1-165   132-273 (281)
324 cd05578 STKc_Yank1 Catalytic d  99.9 2.2E-25 4.7E-30  166.2   6.2  144    1-163   108-253 (258)
325 cd06627 STKc_Cdc7_like Catalyt  99.9 3.8E-25 8.2E-30  164.2   7.3  144    1-164   107-250 (254)
326 cd07832 STKc_CCRK Catalytic do  99.9   4E-25 8.7E-30  167.0   7.5  158    1-164   107-281 (286)
327 KOG0199 ACK and related non-re  99.9 3.8E-25 8.2E-30  176.7   7.4  147    1-165   220-368 (1039)
328 cd05627 STKc_NDR2 Catalytic do  99.9 7.6E-26 1.6E-30  176.6   3.3  148    1-164   109-292 (360)
329 cd06626 STKc_MEKK4 Catalytic d  99.9 6.8E-25 1.5E-29  163.9   8.3  149    1-164   107-260 (264)
330 cd06630 STKc_MEKK1 Catalytic d  99.9 7.8E-25 1.7E-29  164.0   8.6  150    1-164   111-263 (268)
331 cd06641 STKc_MST3 Catalytic do  99.9 6.4E-25 1.4E-29  165.4   8.2  145    1-165   109-253 (277)
332 cd06634 STKc_TAO2 Catalytic do  99.9 5.8E-25 1.3E-29  168.2   8.0  142    1-166   123-268 (308)
333 cd06635 STKc_TAO1 Catalytic do  99.9 1.2E-24 2.7E-29  167.0   9.7  149    1-172   133-284 (317)
334 cd05597 STKc_DMPK_like Catalyt  99.9 4.2E-25 9.1E-30  170.6   7.1  150    1-165   110-266 (331)
335 cd05580 STKc_PKA Catalytic dom  99.9 3.8E-25 8.2E-30  167.8   6.7  140    1-164   109-253 (290)
336 cd08226 PK_STRAD_beta Pseudoki  99.9 9.4E-25   2E-29  168.4   8.8  160    1-164   109-307 (328)
337 KOG0196 Tyrosine kinase, EPH (  99.9 3.9E-26 8.4E-31  183.9   0.9  156    1-175   739-897 (996)
338 cd07846 STKc_CDKL2_3 Catalytic  99.9 5.5E-25 1.2E-29  166.3   7.0  158    1-164   108-282 (286)
339 cd07840 STKc_CDK9_like Catalyt  99.9 5.4E-25 1.2E-29  166.2   6.7  159    1-164   108-283 (287)
340 PLN03225 Serine/threonine-prot  99.9   1E-24 2.2E-29  178.2   8.8  158    1-165   263-450 (566)
341 KOG0194 Protein tyrosine kinas  99.9 1.5E-25 3.2E-30  175.9   3.7  156    1-175   270-426 (474)
342 cd05583 STKc_MSK_N N-terminal   99.9 4.9E-25 1.1E-29  166.9   6.4  154    1-170   113-268 (288)
343 cd08222 STKc_Nek11 Catalytic d  99.9 1.1E-24 2.5E-29  162.5   8.2  143    1-164   114-256 (260)
344 cd05624 STKc_MRCK_beta Catalyt  99.9 3.7E-25 8.1E-30  170.9   5.6  149    1-164   110-265 (331)
345 cd07829 STKc_CDK_like Catalyti  99.9 1.7E-24 3.6E-29  163.3   9.0  158    1-164   106-278 (282)
346 KOG4278 Protein tyrosine kinas  99.9 4.1E-25 8.8E-30  175.0   5.7  155    1-174   373-528 (1157)
347 cd07854 STKc_MAPK4_6 Catalytic  99.9 6.7E-25 1.5E-29  170.1   6.4  160    1-164   122-299 (342)
348 cd07830 STKc_MAK_like Catalyti  99.9 2.6E-24 5.5E-29  162.4   9.3  157    1-164   107-279 (283)
349 cd07836 STKc_Pho85 Catalytic d  99.9 8.5E-25 1.9E-29  165.1   6.7  158    1-164   108-280 (284)
350 KOG0577 Serine/threonine prote  99.9 5.3E-25 1.1E-29  173.2   5.6  142    1-165   134-278 (948)
351 cd07877 STKc_p38alpha_MAPK14 C  99.9 2.5E-24 5.5E-29  167.1   9.3  156    1-165   128-300 (345)
352 cd06633 STKc_TAO3 Catalytic do  99.9 1.9E-24 4.1E-29  165.7   8.3  141    1-165   129-273 (313)
353 PLN00009 cyclin-dependent kina  99.9 1.1E-24 2.3E-29  165.5   6.8  158    1-164   110-283 (294)
354 KOG0690 Serine/threonine prote  99.9 5.9E-25 1.3E-29  162.2   5.2  135    2-157   277-411 (516)
355 cd07864 STKc_CDK12 Catalytic d  99.9 1.5E-24 3.2E-29  165.2   7.5  159    1-164   124-298 (302)
356 KOG0200 Fibroblast/platelet-de  99.9 1.6E-24 3.4E-29  178.6   8.1  152    1-169   426-579 (609)
357 KOG0614 cGMP-dependent protein  99.9 7.4E-25 1.6E-29  169.6   5.3  137    2-158   529-665 (732)
358 cd07851 STKc_p38 Catalytic dom  99.9   2E-24 4.3E-29  167.6   7.8  155    1-164   126-297 (343)
359 cd05576 STKc_RPK118_like Catal  99.9 1.3E-24 2.7E-29  160.4   6.3  131    1-159    93-223 (237)
360 PTZ00024 cyclin-dependent prot  99.9 1.6E-24 3.5E-29  167.5   7.2  159    1-164   127-312 (335)
361 cd06653 STKc_MEKK3_like_1 Cata  99.9 2.4E-24 5.1E-29  161.2   7.8  145    1-164   114-260 (264)
362 KOG0579 Ste20-like serine/thre  99.9 1.8E-24 3.8E-29  171.7   6.8  144    1-165   138-289 (1187)
363 KOG0611 Predicted serine/threo  99.9 1.2E-24 2.7E-29  164.7   5.5  142    1-165   161-303 (668)
364 cd05581 STKc_PDK1 Catalytic do  99.9 2.1E-24 4.5E-29  162.5   6.0  145    1-164   110-276 (280)
365 KOG1094 Discoidin domain recep  99.9 1.9E-24 4.1E-29  169.6   5.9  158    1-169   645-804 (807)
366 cd05123 STKc_AGC Catalytic dom  99.9 4.1E-24   9E-29  158.4   7.5  140    1-161   101-240 (250)
367 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 1.2E-23 2.6E-28  162.3   9.8  156    1-165   116-288 (328)
368 KOG1024 Receptor-like protein   99.9 2.5E-24 5.5E-29  162.1   5.3  152    1-170   404-556 (563)
369 cd05613 STKc_MSK1_N N-terminal  99.9 6.1E-24 1.3E-28  161.1   7.4  148    1-164   113-267 (290)
370 cd07880 STKc_p38gamma_MAPK12 C  99.9 8.4E-24 1.8E-28  164.1   8.1  160    1-169   126-304 (343)
371 KOG1006 Mitogen-activated prot  99.9 5.5E-25 1.2E-29  158.1   1.3  149    3-165   177-327 (361)
372 KOG0584 Serine/threonine prote  99.9 2.6E-24 5.5E-29  169.8   5.1  143    1-164   151-295 (632)
373 smart00220 S_TKc Serine/Threon  99.9 1.4E-23 3.1E-28  154.3   7.5  144    1-164    95-240 (244)
374 KOG1027 Serine/threonine prote  99.9 1.4E-24   3E-29  175.9   2.1  145    1-163   614-765 (903)
375 KOG0666 Cyclin C-dependent kin  99.9   2E-23 4.3E-28  153.2   7.2  162    1-165   140-337 (438)
376 KOG0696 Serine/threonine prote  99.9 6.3E-23 1.4E-27  155.8   8.4  136    2-158   459-594 (683)
377 KOG0574 STE20-like serine/thre  99.9 2.3E-24 4.9E-29  157.8   0.4  142    2-165   138-283 (502)
378 KOG0665 Jun-N-terminal kinase   99.9 7.5E-23 1.6E-27  150.3   7.6  159    1-165   126-310 (369)
379 KOG0664 Nemo-like MAPK-related  99.9   3E-23 6.6E-28  150.1   4.4  157    1-166   164-344 (449)
380 KOG2052 Activin A type IB rece  99.9 2.9E-22 6.3E-27  152.8   9.5  165    2-172   317-506 (513)
381 KOG0695 Serine/threonine prote  99.9   1E-22 2.2E-27  151.2   6.6   95    2-101   360-454 (593)
382 KOG0984 Mitogen-activated prot  99.9   5E-23 1.1E-27  143.2   4.2  104    2-110   157-264 (282)
383 KOG3653 Transforming growth fa  99.9 3.3E-22 7.1E-27  153.5   9.1  173    2-175   316-509 (534)
384 KOG0669 Cyclin T-dependent kin  99.9 1.6E-22 3.5E-27  144.7   6.3  162    1-165   132-315 (376)
385 KOG1025 Epidermal growth facto  99.9 1.5E-22 3.2E-27  164.4   6.6  162    1-180   806-968 (1177)
386 KOG0586 Serine/threonine prote  99.9 2.5E-22 5.3E-27  158.3   5.3  140    1-164   163-305 (596)
387 KOG0662 Cyclin-dependent kinas  99.9 1.1E-21 2.3E-26  134.2   6.8  159    1-164   109-282 (292)
388 KOG4250 TANK binding protein k  99.9 1.4E-21   3E-26  156.4   8.0  177    1-183   128-324 (732)
389 KOG0668 Casein kinase II, alph  99.9 1.8E-21 3.9E-26  137.5   7.6  158    1-164   140-321 (338)
390 KOG0670 U4/U6-associated splic  99.9 3.5E-22 7.6E-27  155.3   4.3  157    1-164   544-745 (752)
391 KOG4236 Serine/threonine prote  99.9 4.7E-23   1E-27  160.6  -0.6  142    1-163   672-817 (888)
392 KOG0607 MAP kinase-interacting  99.8   1E-21 2.3E-26  144.7   5.6  160    1-164   184-360 (463)
393 KOG0612 Rho-associated, coiled  99.8 1.9E-21 4.2E-26  162.2   7.0  141    3-164   185-337 (1317)
394 KOG0590 Checkpoint kinase and   99.8 3.1E-21 6.6E-26  157.9   4.4  155    1-165   428-585 (601)
395 PLN03224 probable serine/threo  99.8   2E-20 4.3E-25  150.2   8.8  156    1-164   317-499 (507)
396 cd05610 STKc_MASTL Catalytic d  99.8 1.2E-20 2.5E-25  157.7   7.2   93   60-165   542-634 (669)
397 KOG0608 Warts/lats-like serine  99.8 2.2E-20 4.7E-25  148.5   5.7   97    4-103   740-876 (1034)
398 KOG1151 Tousled-like protein k  99.8   2E-20 4.3E-25  143.6   5.2  152    1-163   576-739 (775)
399 KOG1345 Serine/threonine kinas  99.8 1.2E-20 2.6E-25  136.3   3.6  147    1-163   129-282 (378)
400 KOG0587 Traf2- and Nck-interac  99.8 4.3E-20 9.4E-25  150.8   7.0  143    2-165   132-282 (953)
401 KOG1290 Serine/threonine prote  99.8 1.2E-19 2.7E-24  140.1   8.9  105   60-164   413-549 (590)
402 cd00180 PKc Catalytic domain o  99.8   2E-19 4.3E-24  129.2   7.1  113    1-165   100-214 (215)
403 KOG1167 Serine/threonine prote  99.8   4E-19 8.7E-24  134.8   5.5  161    2-165   141-381 (418)
404 KOG1240 Protein kinase contain  99.7 1.6E-17 3.4E-22  139.1   7.5  147    1-165   128-291 (1431)
405 PF14531 Kinase-like:  Kinase-l  99.7 2.4E-18 5.1E-23  128.2   2.3  128    1-156   153-288 (288)
406 KOG1152 Signal transduction se  99.7 2.4E-18 5.2E-23  135.5   2.2   93    1-100   678-771 (772)
407 KOG1023 Natriuretic peptide re  99.7 6.5E-17 1.4E-21  127.8   7.5  166    1-173    56-228 (484)
408 KOG4158 BRPK/PTEN-induced prot  99.7 1.1E-16 2.4E-21  121.6   7.3  149    1-166   349-511 (598)
409 KOG1033 eIF-2alpha kinase PEK/  99.7   3E-17 6.5E-22  128.2   3.3  135    1-159   367-506 (516)
410 KOG1164 Casein kinase (serine/  99.7 4.1E-16 8.8E-21  120.1   8.7  172    1-186   130-314 (322)
411 smart00221 STYKc Protein kinas  99.7   2E-16 4.3E-21  115.2   6.2   96    1-100   106-202 (225)
412 KOG0576 Mitogen-activated prot  99.6 1.9E-16 4.1E-21  126.7   5.1  155    3-173   122-294 (829)
413 KOG0606 Microtubule-associated  99.6 2.5E-16 5.4E-21  131.6   4.1  147    2-164   152-311 (1205)
414 COG0515 SPS1 Serine/threonine   99.6 1.8E-14   4E-19  109.8   9.5  157    1-165   109-275 (384)
415 KOG0603 Ribosomal protein S6 k  99.5 4.7E-15   1E-19  118.2   2.6  126    3-159   107-232 (612)
416 KOG0195 Integrin-linked kinase  99.5 4.3E-14 9.4E-19  102.9   6.4  146    1-170   297-447 (448)
417 KOG1163 Casein kinase (serine/  99.4   2E-13 4.2E-18   97.8   5.4  156    1-168   119-283 (341)
418 KOG1165 Casein kinase (serine/  99.4   8E-13 1.7E-17   98.7   8.3  158    1-170   132-300 (449)
419 PRK12274 serine/threonine prot  99.3 1.1E-12 2.4E-17   93.6   1.7   96    1-99     99-208 (218)
420 KOG0590 Checkpoint kinase and   99.3 1.1E-12 2.3E-17  108.0   1.7  150    1-163   131-284 (601)
421 PRK09188 serine/threonine prot  99.3 2.2E-12 4.8E-17  100.1   2.9   69    1-72    119-194 (365)
422 KOG1166 Mitotic checkpoint ser  99.2 5.7E-11 1.2E-15  101.0   9.1  145    1-170   802-954 (974)
423 PRK10359 lipopolysaccharide co  99.2 3.5E-12 7.6E-17   92.7  -0.7   74    1-92    143-216 (232)
424 KOG2137 Protein kinase [Signal  99.1 5.8E-11 1.3E-15   96.3   2.1  149    2-164   108-264 (700)
425 COG4248 Uncharacterized protei  99.0 7.3E-09 1.6E-13   80.5  11.5  164    2-171   126-302 (637)
426 cd05145 RIO1_like RIO kinase f  99.0 1.7E-10 3.6E-15   82.4   2.1   43    1-47    125-168 (190)
427 cd05147 RIO1_euk RIO kinase fa  99.0   2E-10 4.4E-15   81.9   1.4   42    1-46    125-167 (190)
428 KOG1266 Protein kinase [Signal  98.9 2.2E-09 4.8E-14   80.6   5.0  146    1-165   184-331 (458)
429 PRK01723 3-deoxy-D-manno-octul  98.8 2.2E-09 4.7E-14   79.3   2.0   42    1-45    150-191 (239)
430 smart00090 RIO RIO-like kinase  98.7 4.6E-09 9.9E-14   77.5   2.2   43    1-47    156-199 (237)
431 cd05144 RIO2_C RIO kinase fami  98.7 8.1E-09 1.8E-13   74.1   2.5   44    1-47    133-176 (198)
432 KOG0601 Cyclin-dependent kinas  98.6 8.3E-08 1.8E-12   77.0   4.9  152    5-177   234-390 (524)
433 cd05119 RIO RIO kinase family,  98.5 3.5E-08 7.6E-13   70.1   2.1   43    1-47    122-165 (187)
434 KOG0606 Microtubule-associated  98.5 1.2E-07 2.5E-12   80.9   4.7  140    3-160   914-1084(1205)
435 PRK10345 hypothetical protein;  98.5 4.2E-08   9E-13   70.9   1.7   39    2-43    113-156 (210)
436 TIGR03724 arch_bud32 Kae1-asso  98.5 6.4E-08 1.4E-12   69.4   2.4   41    1-45     98-138 (199)
437 PRK14879 serine/threonine prot  98.4 1.1E-07 2.3E-12   68.9   2.2   41    1-45    103-143 (211)
438 PRK09605 bifunctional UGMP fam  98.4 7.2E-08 1.6E-12   79.4   1.2   41    1-45    436-476 (535)
439 KOG1243 Protein kinase [Genera  98.4 6.9E-07 1.5E-11   73.0   6.6   88    1-94    112-199 (690)
440 cd05120 APH_ChoK_like Aminogly  98.4 1.8E-07 3.8E-12   63.6   2.5   45    1-45     94-138 (155)
441 KOG0601 Cyclin-dependent kinas  98.3 4.2E-07 9.1E-12   73.1   3.1  140    1-166   374-515 (524)
442 cd05146 RIO3_euk RIO kinase fa  98.2 6.3E-07 1.4E-11   63.9   1.8   43    1-47    132-175 (197)
443 cd05151 ChoK Choline Kinase (C  98.1 2.5E-06 5.3E-11   59.5   2.6   40    1-44     91-135 (170)
444 COG3642 Mn2+-dependent serine/  97.9   1E-05 2.2E-10   56.7   2.5   37    5-45    104-140 (204)
445 TIGR01982 UbiB 2-polyprenylphe  97.8 1.6E-05 3.5E-10   63.9   3.4   39    6-47    270-308 (437)
446 PF06293 Kdo:  Lipopolysacchari  97.8 1.2E-05 2.6E-10   58.1   1.8   41    2-45    127-170 (206)
447 PF01163 RIO1:  RIO1 family;  I  97.7 3.6E-05 7.7E-10   54.7   3.6   33   14-47    125-157 (188)
448 PRK15123 lipopolysaccharide co  97.7 1.9E-05 4.2E-10   59.3   1.6   40    2-44    147-193 (268)
449 KOG3087 Serine/threonine prote  97.3  0.0002 4.3E-09   50.4   3.0   40    4-46    124-166 (229)
450 PRK04750 ubiB putative ubiquin  97.3 0.00012 2.5E-09   60.2   1.7   34   14-47    278-315 (537)
451 PF06176 WaaY:  Lipopolysacchar  97.2  0.0002 4.4E-09   51.8   2.4   38    2-43    144-181 (229)
452 PRK09902 hypothetical protein;  97.1 0.00024 5.2E-09   51.2   1.5   41    2-45    137-179 (216)
453 COG0478 RIO-like serine/threon  96.5  0.0023   5E-08   47.8   2.7   31   14-44    220-250 (304)
454 COG1718 RIO1 Serine/threonine   96.2  0.0027 5.9E-08   46.8   1.7   43    2-47    175-217 (268)
455 cd05154 ACAD10_11_like Acyl-Co  95.7  0.0083 1.8E-07   43.4   2.5   31   14-44    173-205 (223)
456 cd05155 APH_ChoK_like_1 Unchar  95.4   0.014 2.9E-07   43.1   2.7   31   14-44    163-193 (235)
457 PRK05231 homoserine kinase; Pr  95.2   0.012 2.6E-07   45.4   2.0   30   14-43    186-215 (319)
458 cd05156 ChoK_euk Choline Kinas  95.2   0.016 3.5E-07   44.3   2.6   30   14-43    178-211 (302)
459 cd05157 ETNK_euk Ethanolamine   95.1   0.016 3.5E-07   42.5   2.4   31   14-44    169-200 (235)
460 KOG1035 eIF-2alpha kinase GCN2  95.1   0.026 5.7E-07   50.2   3.8  135    2-167   295-436 (1351)
461 KOG3741 Poly(A) ribonuclease s  95.1    0.17 3.8E-06   41.5   8.0   73    1-95    401-473 (655)
462 TIGR00938 thrB_alt homoserine   94.8   0.018   4E-07   44.2   2.1   30   14-43    186-215 (307)
463 cd05153 HomoserineK_II Homoser  94.8   0.018 3.9E-07   43.9   2.0   29   15-43    175-203 (296)
464 PF01636 APH:  Phosphotransfera  94.8   0.014   3E-07   42.4   1.3   31   14-44    165-196 (239)
465 COG0661 AarF Predicted unusual  94.7   0.025 5.5E-07   46.5   2.6   34   14-47    283-316 (517)
466 TIGR02172 Fb_sc_TIGR02172 Fibr  94.6   0.034 7.3E-07   40.9   2.9   29   15-44    153-181 (226)
467 PRK10271 thiK thiamine kinase;  94.4   0.031 6.8E-07   39.7   2.3   28   16-44     78-105 (188)
468 cd05150 APH Aminoglycoside 3'-  94.3   0.032   7E-07   41.2   2.2   30   14-43    162-191 (244)
469 PF01633 Choline_kinase:  Choli  94.3   0.033 7.1E-07   40.3   2.2   31   15-45    143-174 (211)
470 TIGR02721 ycfN_thiK thiamine k  94.3   0.037   8E-07   41.3   2.5   29   15-44    146-174 (256)
471 TIGR02906 spore_CotS spore coa  94.2   0.037 8.1E-07   42.4   2.6   29   14-43    186-214 (313)
472 PF07387 Seadorna_VP7:  Seadorn  94.2   0.044 9.5E-07   40.2   2.6   37    5-42    153-189 (308)
473 smart00587 CHK ZnF_C4 abd HLH   93.7   0.058 1.3E-06   38.6   2.6   31   14-44    119-154 (196)
474 COG0510 ycfN Thiamine kinase a  93.7   0.055 1.2E-06   40.9   2.5   30   15-44    153-182 (269)
475 TIGR02904 spore_ysxE spore coa  92.8   0.063 1.4E-06   41.3   1.7   32   14-45    195-226 (309)
476 PLN02236 choline kinase         92.7     0.1 2.2E-06   40.9   2.7   31   14-44    199-230 (344)
477 cd05152 MPH2' Macrolide 2'-Pho  92.5    0.11 2.3E-06   39.4   2.6   32   14-45    184-216 (276)
478 COG2334 Putative homoserine ki  92.0    0.14   3E-06   39.9   2.7   27   17-43    199-226 (331)
479 KOG1093 Predicted protein kina  92.0    0.12 2.5E-06   42.6   2.3   82   77-162   110-191 (725)
480 COG3173 Predicted aminoglycosi  91.4     0.2 4.3E-06   38.8   2.9   33   14-46    197-229 (321)
481 PF12260 PIP49_C:  Protein-kina  91.4    0.17 3.6E-06   36.1   2.3   46    1-46     67-112 (188)
482 PRK06148 hypothetical protein;  91.1    0.17 3.6E-06   45.5   2.6   32   14-45    202-236 (1013)
483 PRK09550 mtnK methylthioribose  91.1    0.24 5.2E-06   39.6   3.2   31   14-45    222-252 (401)
484 PRK11768 serine/threonine prot  90.9    0.14   3E-06   39.8   1.7   29   14-44    195-223 (325)
485 PLN02421 phosphotransferase, a  90.8    0.22 4.8E-06   38.8   2.8   29   16-44    183-212 (330)
486 KOG2268 Serine/threonine prote  90.8     0.2 4.4E-06   39.0   2.4   30   14-43    220-249 (465)
487 KOG0576 Mitogen-activated prot  90.5    0.14   3E-06   43.2   1.4   85    4-99    347-431 (829)
488 PRK12396 5-methylribose kinase  90.3    0.24 5.2E-06   39.5   2.6   32   14-46    226-257 (409)
489 TIGR01767 MTRK 5-methylthiorib  90.2    0.32   7E-06   38.3   3.1   31   14-45    191-221 (370)
490 PRK06149 hypothetical protein;  88.0    0.32   7E-06   43.6   2.0   31   14-44    207-242 (972)
491 KOG1826 Ras GTPase activating   87.5   0.058 1.3E-06   49.9  -2.8   79   17-97   1361-1439(2724)
492 KOG1235 Predicted unusual prot  87.0    0.55 1.2E-05   39.0   2.6   34   14-47    319-356 (538)
493 PLN02756 S-methyl-5-thioribose  86.3    0.77 1.7E-05   36.9   3.0   31   14-45    229-259 (418)
494 PF02958 EcKinase:  Ecdysteroid  86.1    0.43 9.4E-06   36.3   1.6   30   15-44    215-249 (294)
495 PHA03111 Ser/Thr kinase; Provi  85.3       1 2.2E-05   35.3   3.1   21   12-32    299-319 (444)
496 PF05445 Pox_ser-thr_kin:  Poxv  83.3     1.3 2.9E-05   34.8   3.0   19   13-31    296-314 (434)
497 PF10707 YrbL-PhoP_reg:  PhoP r  82.1     1.1 2.5E-05   32.2   2.2   33    7-42    132-169 (199)
498 PLN02876 acyl-CoA dehydrogenas  79.3       2 4.3E-05   38.0   3.1   31   15-45    225-257 (822)
499 PRK10593 hypothetical protein;  79.3     1.9 4.2E-05   33.1   2.7   27   15-41    193-221 (297)
500 COG5072 ALK1 Serine/threonine   78.8     1.4   3E-05   35.1   1.8   29   16-45    342-370 (488)

No 1  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=2.9e-34  Score=213.58  Aligned_cols=150  Identities=31%  Similarity=0.569  Sum_probs=117.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      +|++||.|||+  +++||||||||+|+|+...|.+||+|||.+..+...    ......||..|++||.+.+..|+.++|
T Consensus       186 ~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sD  259 (364)
T KOG0581|consen  186 AVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSD  259 (364)
T ss_pred             HHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccc
Confidence            57899999996  588999999999999999999999999999777654    233456999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      |||||+.++|+..|+.||...................       ...+.+|..  ...+++..|+..||+.||.+|||+.
T Consensus       260 IWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-------~ppP~lP~~--~fS~ef~~FV~~CL~Kdp~~R~s~~  330 (364)
T KOG0581|consen  260 IWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-------EPPPRLPEG--EFSPEFRSFVSCCLRKDPSERPSAK  330 (364)
T ss_pred             eecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-------CCCCCCCcc--cCCHHHHHHHHHHhcCCcccCCCHH
Confidence            9999999999999999998753332233322221111       011233332  2556788899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       331 qLl~H  335 (364)
T KOG0581|consen  331 QLLQH  335 (364)
T ss_pred             HHhcC
Confidence            99864


No 2  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.98  E-value=1.4e-32  Score=211.58  Aligned_cols=156  Identities=38%  Similarity=0.503  Sum_probs=121.2

Q ss_pred             ChhhhhhhhhcCCCCC-eEeccCCCCCeEeCCCC-CeeecccccceeeccCCCcceeeeeccccccccccccc--CCCCC
Q 047677            1 GAAKGLEYLHHGCARP-VIHRDVKSSNILLDEFL-KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY--TSKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~g-i~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~--~~~~~   76 (200)
                      ||+.|+.|||   +++ |||||||+.|+|++.++ ++||+|||++.......  .......||+.|+|||++.  ...++
T Consensus       150 diArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~  224 (362)
T KOG0192|consen  150 DIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYT  224 (362)
T ss_pred             HHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCC
Confidence            6899999999   788 99999999999999997 99999999997765432  1122245899999999999  56899


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      .++|+||||+++||+++|..||.....  ......+.            .....+..+......+..++..||+.||..|
T Consensus       225 ~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~------------~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~R  290 (362)
T KOG0192|consen  225 EKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVV------------VGGLRPPIPKECPPHLSSLMERCWLVDPSRR  290 (362)
T ss_pred             ccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHH------------hcCCCCCCCccCCHHHHHHHHHhCCCCCCcC
Confidence            999999999999999999999986543  11111111            1122222233345578888899999999999


Q ss_pred             CCHHHHHHHHHhhCCCCcc
Q 047677          157 PTMRSVVQMLEEAEPCNLV  175 (200)
Q Consensus       157 pt~~~il~~L~~~~~~~~~  175 (200)
                      |++.+++..|+.+...-..
T Consensus       291 P~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  291 PSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CCHHHHHHHHHHHHHhhcc
Confidence            9999999999988665443


No 3  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98  E-value=6.3e-33  Score=217.42  Aligned_cols=144  Identities=30%  Similarity=0.492  Sum_probs=116.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||+.||.|||   +++|+|||||..|++++.+.++|++|||+|..+...+.....  ..||+.|+|||++...+.+..+|
T Consensus       126 QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T--lCGTPNYIAPEVl~k~gHsfEvD  200 (592)
T KOG0575|consen  126 QIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT--LCGTPNYIAPEVLNKSGHSFEVD  200 (592)
T ss_pred             HHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcccccce--ecCCCcccChhHhccCCCCCchh
Confidence            7999999999   899999999999999999999999999999988765444443  45999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      |||+||++|-++.|++||....               ...++..+....+.. +........+||.++|..||.+|||++
T Consensus       201 iWSlGcvmYtLL~G~PPFetk~---------------vkety~~Ik~~~Y~~-P~~ls~~A~dLI~~lL~~~P~~Rpsl~  264 (592)
T KOG0575|consen  201 IWSLGCVMYTLLVGRPPFETKT---------------VKETYNKIKLNEYSM-PSHLSAEAKDLIRKLLRPNPSERPSLD  264 (592)
T ss_pred             hhhhhhHHHhhhhCCCCcccch---------------HHHHHHHHHhcCccc-ccccCHHHHHHHHHHhcCCcccCCCHH
Confidence            9999999999999999997431               122222222222211 123334566788899999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       265 ~vL~h  269 (592)
T KOG0575|consen  265 EVLDH  269 (592)
T ss_pred             HHhcC
Confidence            99863


No 4  
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=4.6e-32  Score=195.62  Aligned_cols=150  Identities=25%  Similarity=0.417  Sum_probs=117.6

Q ss_pred             ChhhhhhhhhcCCCCC--eEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARP--VIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~g--i~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~   78 (200)
                      |+|.||..+|..- ..  +.||||||.||+++.+|++||+|||+++.+.+.  .......+||+.|++||+++..+|+.+
T Consensus       132 QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~k  208 (375)
T KOG0591|consen  132 QLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK--TTFAHSLVGTPYYMSPERIHESGYNFK  208 (375)
T ss_pred             HHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHhcch--hHHHHhhcCCCcccCHHHHhcCCCCcc
Confidence            6889999999411 33  899999999999999999999999999887653  233445679999999999999999999


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCch-HHHHHHHHHHHHHhcCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETF-KENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +||||+||++|||..-++||....     +.          .-..++....+++.+ .-.+.++..++..|+..||..||
T Consensus       209 SDiWslGCllyEMcaL~~PF~g~n-----~~----------~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP  273 (375)
T KOG0591|consen  209 SDIWSLGCLLYEMCALQSPFYGDN-----LL----------SLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRP  273 (375)
T ss_pred             hhHHHHHHHHHHHHhcCCCccccc-----HH----------HHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCC
Confidence            999999999999999999997541     10          112233344555554 44556788899999999999999


Q ss_pred             CHHHHHHHHHh
Q 047677          158 TMRSVVQMLEE  168 (200)
Q Consensus       158 t~~~il~~L~~  168 (200)
                      +...++..+.+
T Consensus       274 ~t~~~v~di~~  284 (375)
T KOG0591|consen  274 DTVPYVQDIQS  284 (375)
T ss_pred             CcchHHHHHHH
Confidence            86555555544


No 5  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97  E-value=5.5e-32  Score=209.44  Aligned_cols=153  Identities=32%  Similarity=0.473  Sum_probs=118.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |||+|++||+   ++++|||||-+.|||++.+..+||+|||+++....... .......-...|.|||.+....++.++|
T Consensus       311 qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y-~~~~~~kfPIkWtAPEa~~~~~FS~kSD  386 (468)
T KOG0197|consen  311 QIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY-TASEGGKFPIKWTAPEALNYGKFSSKSD  386 (468)
T ss_pred             HHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCce-eecCCCCCCceecCHHHHhhCCcccccc
Confidence            7999999999   89999999999999999999999999999985443222 1111122356899999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC-CCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI-PETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +||||+++||++| |+.||......  +..              +.+...+ -+.+...+..++++|..||+.+|++|||
T Consensus       387 VWSFGVlL~E~fT~G~~py~~msn~--ev~--------------~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPt  450 (468)
T KOG0197|consen  387 VWSFGVLLWELFTYGRVPYPGMSNE--EVL--------------ELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPT  450 (468)
T ss_pred             eeehhhhHHHHhccCCCCCCCCCHH--HHH--------------HHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCC
Confidence            9999999999999 88888644321  111              1111222 2223444568899999999999999999


Q ss_pred             HHHHHHHHHhhCCCC
Q 047677          159 MRSVVQMLEEAEPCN  173 (200)
Q Consensus       159 ~~~il~~L~~~~~~~  173 (200)
                      ++.+...|+++...+
T Consensus       451 F~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  451 FETLREVLEDFFTST  465 (468)
T ss_pred             HHHHHHHHHHhhhcc
Confidence            999999999876654


No 6  
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97  E-value=3.2e-31  Score=205.13  Aligned_cols=154  Identities=31%  Similarity=0.455  Sum_probs=114.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||.||+++.++.++|+|||++................++..|+|||++.+..++.++|
T Consensus       182 qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  258 (338)
T cd05102         182 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSD  258 (338)
T ss_pred             HHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccC
Confidence            6889999999   8999999999999999999999999999987653322111111223457899999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....... .......             ..............+.+++.+||+.||.+|||+
T Consensus       259 iwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~  324 (338)
T cd05102         259 VWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLK-------------DGTRMRAPENATPEIYRIMLACWQGDPKERPTF  324 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999997 999997543221 1111100             000011112223468889999999999999999


Q ss_pred             HHHHHHHHhhCC
Q 047677          160 RSVVQMLEEAEP  171 (200)
Q Consensus       160 ~~il~~L~~~~~  171 (200)
                      .++++.|+++..
T Consensus       325 ~el~~~l~~~~~  336 (338)
T cd05102         325 SALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754


No 7  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=3.2e-32  Score=205.01  Aligned_cols=145  Identities=28%  Similarity=0.480  Sum_probs=114.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC---CCeeecccccceeeccCCCcceeeeecccccccccccccCCCC--
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF---LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV--   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~--   75 (200)
                      |++.|+.|||   ++||+||||||+|||+..+   ..+|+.|||+++..+..   .......||+.|.|||++.+.+.  
T Consensus       284 Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~  357 (475)
T KOG0615|consen  284 QLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEY  357 (475)
T ss_pred             HHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccc---eehhhhcCCccccChhheecCCeec
Confidence            7899999999   8999999999999999876   66899999999887632   22233559999999999887653  


Q ss_pred             -CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC---CCchHHHHHHHHHHHHHhcCC
Q 047677           76 -DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI---PETFKENAVEILRIAVLCTTT  151 (200)
Q Consensus        76 -~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~  151 (200)
                       ..++|+||+||++|-+++|.+||.....+. .             -...+..+.+   |..+.....+.++++.+||..
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-s-------------l~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~V  423 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-S-------------LKEQILKGRYAFGPLQWDRISEEALDLINWMLVV  423 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCCc-c-------------HHHHHhcCcccccChhhhhhhHHHHHHHHHhhEe
Confidence             347899999999999999999998654321 1             1112222333   344677777889999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 047677          152 QPALRPTMRSVVQM  165 (200)
Q Consensus       152 dp~~Rpt~~~il~~  165 (200)
                      ||++|||+.|+++.
T Consensus       424 dP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  424 DPENRPSADEALNH  437 (475)
T ss_pred             CcccCcCHHHHhcC
Confidence            99999999999864


No 8  
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=5.9e-32  Score=202.95  Aligned_cols=152  Identities=32%  Similarity=0.503  Sum_probs=111.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCc-ceeeeecccccccccccccCC-CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTS-KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~-~~~~   77 (200)
                      ||++||+|||   ++|++|+||||+||+++. ++.+||+|||++......... .......||+.|++||++..+ ....
T Consensus       125 ~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~  201 (313)
T KOG0198|consen  125 QILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARR  201 (313)
T ss_pred             HHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCc
Confidence            6899999999   899999999999999999 799999999998766531111 122235689999999999863 2345


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      .+|||||||++.||+||..||.... ........            .......|..+........+|+.+|+..||.+||
T Consensus       202 ~sDiWSlGCtVvEM~Tg~~PW~~~~-~~~~~~~~------------ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rp  268 (313)
T KOG0198|consen  202 ESDIWSLGCTVVEMLTGKPPWSEFF-EEAEALLL------------IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRP  268 (313)
T ss_pred             cchhhhcCCEEEeccCCCCcchhhc-chHHHHHH------------HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCc
Confidence            8999999999999999999997531 10110000            0011122223333445677788899999999999


Q ss_pred             CHHHHHHHHHh
Q 047677          158 TMRSVVQMLEE  168 (200)
Q Consensus       158 t~~~il~~L~~  168 (200)
                      |++++++.---
T Consensus       269 ta~eLL~hpf~  279 (313)
T KOG0198|consen  269 TAEELLEHPFL  279 (313)
T ss_pred             CHHHHhhChhh
Confidence            99999886433


No 9  
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.97  E-value=1.4e-31  Score=207.46  Aligned_cols=144  Identities=28%  Similarity=0.463  Sum_probs=112.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc---------ce--eeeeccccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK---------DT--THVIAGTTGYIAPEY   69 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~---------~~--~~~~~~~~~~~~pE~   69 (200)
                      +|+.||+|||   ++|||||||||+|||++.++.++|.|||.+..+......         ..  ...++||-.|.+||+
T Consensus       182 eIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPEl  258 (604)
T KOG0592|consen  182 EILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPEL  258 (604)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHH
Confidence            5789999999   899999999999999999999999999999876532111         11  134679999999999


Q ss_pred             ccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhcc--CCCCCchHHHHHHHHHHHHH
Q 047677           70 GYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVD--SSIPETFKENAVEILRIAVL  147 (200)
Q Consensus        70 ~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~  147 (200)
                      +.....+..+|+|+|||++|+|+.|++||....    ++           ....+++.  =.+++.+.+   ...+|+.+
T Consensus       259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N----ey-----------liFqkI~~l~y~fp~~fp~---~a~dLv~K  320 (604)
T KOG0592|consen  259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN----EY-----------LIFQKIQALDYEFPEGFPE---DARDLIKK  320 (604)
T ss_pred             hcCCCCCcccchHHHHHHHHHHhcCCCCCcccc----HH-----------HHHHHHHHhcccCCCCCCH---HHHHHHHH
Confidence            999999999999999999999999999997432    11           11222222  233444443   55567779


Q ss_pred             hcCCCCCCCCCHHHHHHH
Q 047677          148 CTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       148 cl~~dp~~Rpt~~~il~~  165 (200)
                      .|..||.+|+|+++|.+.
T Consensus       321 LLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  321 LLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHccCccccccHHHHhhC
Confidence            999999999999888664


No 10 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=6.4e-31  Score=204.69  Aligned_cols=145  Identities=25%  Similarity=0.420  Sum_probs=113.9

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      +++||+|||   .+||+|||||..||++..+|.+||+|||+|..+.....  ......||+.|+|||++....|.++.||
T Consensus       378 ~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDI  452 (550)
T KOG0578|consen  378 ILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDI  452 (550)
T ss_pred             HHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccc
Confidence            578999999   89999999999999999999999999999987765443  2334569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMRS  161 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~  161 (200)
                      ||||++++||+.|.+||....    .+....+  ....+.      +. -.........|.+|+.+||+.|+.+|+++.|
T Consensus       453 WSLGIMaIEMveGEPPYlnE~----PlrAlyL--Ia~ng~------P~-lk~~~klS~~~kdFL~~cL~~dv~~RasA~e  519 (550)
T KOG0578|consen  453 WSLGIMAIEMVEGEPPYLNEN----PLRALYL--IATNGT------PK-LKNPEKLSPELKDFLDRCLVVDVEQRASAKE  519 (550)
T ss_pred             hhhhhHHHHHhcCCCCccCCC----hHHHHHH--HhhcCC------CC-cCCccccCHHHHHHHHHHhhcchhcCCCHHH
Confidence            999999999999999997521    1111111  000111      11 1123444567888999999999999999999


Q ss_pred             HHH
Q 047677          162 VVQ  164 (200)
Q Consensus       162 il~  164 (200)
                      +|+
T Consensus       520 LL~  522 (550)
T KOG0578|consen  520 LLE  522 (550)
T ss_pred             Hhc
Confidence            986


No 11 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-30  Score=198.08  Aligned_cols=165  Identities=28%  Similarity=0.466  Sum_probs=119.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceee--eecccccccccccccC--CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTH--VIAGTTGYIAPEYGYT--SKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~--~~~~~~~~~~pE~~~~--~~~~   76 (200)
                      ++++||.|||   ++|.||||||+.|||++.+|.++|+|||....+-..+.+....  ...|+++|++||++..  .+|+
T Consensus       134 e~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd  210 (516)
T KOG0582|consen  134 EVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYD  210 (516)
T ss_pred             HHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCcc
Confidence            3689999999   8999999999999999999999999999987776655444332  3469999999999554  3699


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCC-CchHHHHHHHHHHHHHhcCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIP-ETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      .|+||||||++++|+.+|..||........-...     ..  +......-...+ .........+.+++..||..||.+
T Consensus       211 fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t-----Lq--n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~k  283 (516)
T KOG0582|consen  211 FKADIWSFGITACELAHGHAPFSKYPPMKVLLLT-----LQ--NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSK  283 (516)
T ss_pred             chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH-----hc--CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCccc
Confidence            9999999999999999999999754322111111     01  110000000111 113344457888999999999999


Q ss_pred             CCCHHHHHH--HHHhhCCCCcc
Q 047677          156 RPTMRSVVQ--MLEEAEPCNLV  175 (200)
Q Consensus       156 Rpt~~~il~--~L~~~~~~~~~  175 (200)
                      |||+++++.  .+...+.....
T Consensus       284 RptAskLlkh~FFk~~k~~~~~  305 (516)
T KOG0582|consen  284 RPTASKLLKHAFFKKAKSKEYL  305 (516)
T ss_pred             CCCHHHHhccHHHhhccchhhc
Confidence            999999985  45555554443


No 12 
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.97  E-value=2.6e-31  Score=197.68  Aligned_cols=136  Identities=29%  Similarity=0.418  Sum_probs=106.0

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+.||.|||   ++|||||||||+|||++.+|.++|+|||+++.....+....  ...||+.|+|||++...+++..+|.
T Consensus       134 i~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~--tfcGT~eYmAPEil~~~gy~~~vDW  208 (357)
T KOG0598|consen  134 IVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR--TFCGTPEYMAPEILLGKGYDKAVDW  208 (357)
T ss_pred             HHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc--cccCCccccChHHHhcCCCCcccch
Confidence            577999999   89999999999999999999999999999987655433332  2569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ||+|+++|+|++|.+||......               .....+.....+..+.-...+..+++.++|..||.+|.
T Consensus       209 WsLGillYeML~G~pPF~~~~~~---------------~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  209 WSLGILLYEMLTGKPPFYAEDVK---------------KMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HhHHHHHHHHhhCCCCCcCccHH---------------HHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            99999999999999999754321               11111222222222222334667788899999999997


No 13 
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=9e-30  Score=197.04  Aligned_cols=169  Identities=42%  Similarity=0.747  Sum_probs=134.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeee-cccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVI-AGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~-~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      ++|+||+|||+.+...|+|||||++|||++.+.+.||+|||++......  ....... .||..|++||+...+..+.++
T Consensus       182 g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~Ks  259 (361)
T KOG1187|consen  182 GAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKS  259 (361)
T ss_pred             HHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCccc
Confidence            5789999999876667999999999999999999999999999554431  1111111 689999999999998899999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCC-CCchhHHHHHHHhhcccchhhhhccCCCC-CchH--HHHHHHHHHHHHhcCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEY-GENKDIVRWVCSHFNSKQSVLTLVDSSIP-ETFK--ENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~li~~cl~~dp~~  155 (200)
                      |+||||+++.|+++|+.+.+... .....+..|....... ....+++++.+. ....  .....+..+...|++.+|.+
T Consensus       260 DVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~-~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~  338 (361)
T KOG1187|consen  260 DVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE-GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKE  338 (361)
T ss_pred             ccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC-cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCc
Confidence            99999999999999998887544 2233366666543333 377788888875 3322  56778999999999999999


Q ss_pred             CCCHHHHHHHHHhhCCC
Q 047677          156 RPTMRSVVQMLEEAEPC  172 (200)
Q Consensus       156 Rpt~~~il~~L~~~~~~  172 (200)
                      ||+|.+++++|+.+...
T Consensus       339 RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  339 RPTMSQVVKELEGILSL  355 (361)
T ss_pred             CcCHHHHHHHHHhhccc
Confidence            99999999999666544


No 14 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96  E-value=2.7e-30  Score=195.13  Aligned_cols=151  Identities=26%  Similarity=0.412  Sum_probs=114.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|+|||...+..++.++|
T Consensus       132 ~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  208 (283)
T cd05048         132 QIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESD  208 (283)
T ss_pred             HHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhh
Confidence            5789999999   8999999999999999999999999999987654322211222233567899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  +....+.             ....+.........+.+++.+||+.||.+||++
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~~--~~~~~i~-------------~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~  273 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMIR-------------SRQLLPCPEDCPARVYALMIECWNEIPARRPRF  273 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH-------------cCCcCCCcccCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999998 99998753321  1111111             111112223334578889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      +++++.|+++
T Consensus       274 ~~i~~~l~~~  283 (283)
T cd05048         274 KDIHTRLRSW  283 (283)
T ss_pred             HHHHHHHhcC
Confidence            9999999763


No 15 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.96  E-value=2.5e-30  Score=188.38  Aligned_cols=158  Identities=22%  Similarity=0.323  Sum_probs=113.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++|+.|+|   +++++||||||+||+++.+|.+||+|||+++.+..++.  ..+....|..|.|||.+.+ .+|...+
T Consensus       109 Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pV  183 (396)
T KOG0593|consen  109 QLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPV  183 (396)
T ss_pred             HHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcc
Confidence            6889999999   89999999999999999999999999999987764322  2222346889999999888 6799999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhcc------------CCCCCc----hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVD------------SSIPET----FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~----~~~~~~~~~~  143 (200)
                      ||||+||++.||++|.+.|....+-+.-+. ........-.+.+.+..            ...++.    ......-+++
T Consensus       184 DiWAiGCv~aEl~~G~pL~PG~SDiDQLy~-I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld  262 (396)
T KOG0593|consen  184 DIWAIGCVFAELLTGEPLWPGRSDIDQLYL-IRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLD  262 (396)
T ss_pred             cchhhhHHHHHHhcCCcCCCCcchHHHHHH-HHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHH
Confidence            999999999999999999976543332211 11101111111111111            111111    2333446788


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||+.||++|++-++++.
T Consensus       263 ~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  263 LLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HHHHHhcCCccccccHHHHhc
Confidence            999999999999999998863


No 16 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=3.2e-30  Score=197.28  Aligned_cols=159  Identities=23%  Similarity=0.263  Sum_probs=117.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      ||++||+|+|   ++|+.|||+||+|||+..+..+||+|||+|+...+....+   ..+.|..|.|||++.. .-|+.+.
T Consensus       118 QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT---eYVSTRWYRAPEvLLrs~~Ys~pv  191 (538)
T KOG0661|consen  118 QILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT---EYVSTRWYRAPEVLLRSGYYSSPV  191 (538)
T ss_pred             HHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCcc---hhhhcccccchHHhhhccccCCch
Confidence            7999999999   8999999999999999988999999999998876644333   3346899999998654 5588999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHH-HHHhh-----cccchhhhhccCCCCCc--------hHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRW-VCSHF-----NSKQSVLTLVDSSIPET--------FKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li  145 (200)
                      |+||+||+++|+.+-++.|....+-+.-+.-. +....     .....+...++-.+|+.        ......++.+++
T Consensus       192 D~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li  271 (538)
T KOG0661|consen  192 DMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLI  271 (538)
T ss_pred             HHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHH
Confidence            99999999999999999887654333322211 11000     01112222333333322        233556788899


Q ss_pred             HHhcCCCCCCCCCHHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ..|+.+||.+|||++++++.
T Consensus       272 ~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  272 ERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHhcCCCccCccHHHHhcC
Confidence            99999999999999999886


No 17 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=3.4e-30  Score=195.34  Aligned_cols=143  Identities=31%  Similarity=0.507  Sum_probs=115.8

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      ++.|+.|||   .++.+|||||+.||++..+|.++|+|||.+..+.......  ..+.||+.|+|||++.+..|+.++||
T Consensus       120 ~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KADI  194 (467)
T KOG0201|consen  120 VLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKADI  194 (467)
T ss_pred             HHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhcc--ccccccccccchhhhccccccchhhh
Confidence            678999999   8999999999999999999999999999998876554333  34669999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      ||||++++||.+|.+|+.....                .+..-.+....|+. .......+.+|+..||..||+.||++.
T Consensus       195 WSLGITaiEla~GePP~s~~hP----------------mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~  258 (467)
T KOG0201|consen  195 WSLGITAIELAKGEPPHSKLHP----------------MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAK  258 (467)
T ss_pred             hhhhHHHHHHhcCCCCCcccCc----------------ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHH
Confidence            9999999999999999975432                11222222333333 223445688899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       259 ~LLKh  263 (467)
T KOG0201|consen  259 ELLKH  263 (467)
T ss_pred             HHhhh
Confidence            98764


No 18 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96  E-value=4.9e-30  Score=193.78  Aligned_cols=150  Identities=23%  Similarity=0.379  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||.||++..++.++|+|||++................+++.|+|||.+.+..++.++|
T Consensus       132 ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05091         132 QIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSD  208 (283)
T ss_pred             HHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchh
Confidence            5789999999   8999999999999999999999999999987654322211112223467899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ......+.             ..............+.+++.+||+.+|.+||++
T Consensus       209 v~slG~~l~el~~~g~~p~~~~~~--~~~~~~i~-------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~  273 (283)
T cd05091         209 IWSYGVVLWEVFSYGLQPYCGYSN--QDVIEMIR-------------NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF  273 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence            9999999999998 7778764321  11111111             111111122233467889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      ++++..|+.
T Consensus       274 ~~i~~~l~~  282 (283)
T cd05091         274 KDIHSRLRT  282 (283)
T ss_pred             HHHHHHhhC
Confidence            999999864


No 19 
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96  E-value=1.1e-29  Score=196.47  Aligned_cols=155  Identities=30%  Similarity=0.446  Sum_probs=115.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++||+||||||.||+++.++.++|+|||++................++..|+|||++.+..++.++|
T Consensus       181 qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  257 (337)
T cd05054         181 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSD  257 (337)
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcccc
Confidence            5889999999   8999999999999999999999999999987654322111122233466799999998889999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....... ......    ...      .....+   ......+.+++.+||+.+|++||++
T Consensus       258 i~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~----~~~------~~~~~~---~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         258 VWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL----KEG------TRMRAP---EYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH----hcc------CCCCCC---ccCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999998 999986532211 111110    000      011111   1223468889999999999999999


Q ss_pred             HHHHHHHHhhCCC
Q 047677          160 RSVVQMLEEAEPC  172 (200)
Q Consensus       160 ~~il~~L~~~~~~  172 (200)
                      .++++.|+.+.+.
T Consensus       324 ~ell~~l~~~~~~  336 (337)
T cd05054         324 SELVEILGDLLQE  336 (337)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999987653


No 20 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.96  E-value=8.1e-30  Score=193.15  Aligned_cols=155  Identities=25%  Similarity=0.409  Sum_probs=114.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||.||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       128 ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  204 (288)
T cd05093         128 QIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  204 (288)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhh
Confidence            5789999999   8999999999999999999999999999987553322111111223466899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .....+.             ..............+.+++.+||+.||.+|||+
T Consensus       205 iwslG~il~~l~t~g~~p~~~~~~~--~~~~~i~-------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  269 (288)
T cd05093         205 VWSLGVVLWEIFTYGKQPWYQLSNN--EVIECIT-------------QGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNI  269 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9999999999998 88888644321  1111110             011111111123468889999999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|+++....
T Consensus       270 ~~v~~~l~~~~~~~  283 (288)
T cd05093         270 KEIHSLLQNLAKAS  283 (288)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999887543


No 21 
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96  E-value=9.2e-30  Score=191.12  Aligned_cols=151  Identities=26%  Similarity=0.391  Sum_probs=112.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       120 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  196 (272)
T cd05075         120 DIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSD  196 (272)
T ss_pred             HHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHH
Confidence            5789999999   7999999999999999999999999999987654332111111223466899999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.    .         .............+.+++.+||+.||++|||+
T Consensus       197 i~slG~il~el~~~g~~p~~~~~~--~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  261 (272)
T cd05075         197 VWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLR----Q---------GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSF  261 (272)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH----c---------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            9999999999999 7888864321  11111111    0         00001111223467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+.+
T Consensus       262 ~~l~~~l~~~  271 (272)
T cd05075         262 ETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHhh
Confidence            9999999874


No 22 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96  E-value=1.2e-29  Score=198.83  Aligned_cols=153  Identities=28%  Similarity=0.452  Sum_probs=113.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++................++..|+|||++.+..++.++|
T Consensus       220 qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  296 (374)
T cd05106         220 QVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSD  296 (374)
T ss_pred             HHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcccc
Confidence            5889999999   8999999999999999999999999999987654332211111122456799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....... .......    .      ......+..   ....+.+++.+||+.||.+|||+
T Consensus       297 vwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~----~------~~~~~~~~~---~~~~l~~li~~cl~~dp~~RPs~  362 (374)
T cd05106         297 VWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVK----R------GYQMSRPDF---APPEIYSIMKMCWNLEPTERPTF  362 (374)
T ss_pred             HHHHHHHHHHHHhCCCCCCccccccH-HHHHHHH----c------ccCccCCCC---CCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999997 999997543221 1111110    0      001111111   23468889999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      .++++.|+++.
T Consensus       363 ~~l~~~l~~~~  373 (374)
T cd05106         363 SQISQLIQRQL  373 (374)
T ss_pred             HHHHHHHHHHh
Confidence            99999998863


No 23 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96  E-value=1.2e-29  Score=192.50  Aligned_cols=154  Identities=26%  Similarity=0.401  Sum_probs=115.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||.+.+..++.++|
T Consensus       131 ~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  207 (291)
T cd05094         131 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  207 (291)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence            5789999999   8999999999999999999999999999986554322111111233567899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  ......             .....+.........+.+++.+||+.||.+|||+
T Consensus       208 i~slG~il~el~t~g~~p~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  272 (291)
T cd05094         208 VWSFGVILWEIFTYGKQPWFQLSNT--EVIECI-------------TQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNI  272 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-------------hCCCCCCCCccCCHHHHHHHHHHcccChhhCcCH
Confidence            9999999999998 99998643221  111110             0111111111223467889999999999999999


Q ss_pred             HHHHHHHHhhCCC
Q 047677          160 RSVVQMLEEAEPC  172 (200)
Q Consensus       160 ~~il~~L~~~~~~  172 (200)
                      .++++.|+++...
T Consensus       273 ~~v~~~l~~~~~~  285 (291)
T cd05094         273 KEIYKILHALGKA  285 (291)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998554


No 24 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96  E-value=1.2e-29  Score=199.09  Aligned_cols=170  Identities=30%  Similarity=0.432  Sum_probs=123.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |+++|+.|||   .++|||+|||..||++..++.++|+|||++..-.............|...|+|||+++   ...|++
T Consensus       496 QiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~  572 (678)
T KOG0193|consen  496 QIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSF  572 (678)
T ss_pred             HHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCc
Confidence            7899999999   8999999999999999999999999999986544332223333345788999999876   345889


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      .+|+||||+++|||++|..||. ....+..+      +.-.++.+    .+...........++.+|+..||..++++||
T Consensus       573 qSDVYaFGiV~YELltg~lPys-i~~~dqIi------fmVGrG~l----~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP  641 (678)
T KOG0193|consen  573 QSDVYAFGIVWYELLTGELPYS-IQNRDQII------FMVGRGYL----MPDLSKIRSNCPKAMKRLLSDCWKFDREERP  641 (678)
T ss_pred             ccchhhhhHHHHHHHhCcCCcC-CCChhheE------EEeccccc----CccchhhhccCHHHHHHHHHHHHhcCcccCc
Confidence            9999999999999999999998 32222110      00011111    1112222333444788899999999999999


Q ss_pred             CHHHHHHHHHhhCC-CCccceeeccCcc
Q 047677          158 TMRSVVQMLEEAEP-CNLVGIVISKDGA  184 (200)
Q Consensus       158 t~~~il~~L~~~~~-~~~~~~~~~~~~~  184 (200)
                      .+.+|+..|+.+.. .....+..+.+..
T Consensus       642 ~F~~il~~l~~l~~~~pki~RS~S~P~~  669 (678)
T KOG0193|consen  642 LFPQLLSKLEELLPSLPKINRSASEPVL  669 (678)
T ss_pred             cHHHHHHHHHHhhhcccccccCcCccch
Confidence            99999999998888 4444454444433


No 25 
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=1.6e-29  Score=196.56  Aligned_cols=145  Identities=24%  Similarity=0.449  Sum_probs=110.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK------   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~------   74 (200)
                      |+++|+.++|   ++||||.||||.|.++-+ |.+||+|||++.......+........||+.|++||.+....      
T Consensus       468 qML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~  543 (677)
T KOG0596|consen  468 QMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENG  543 (677)
T ss_pred             HHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCC
Confidence            5789999999   899999999999999876 899999999998877655544555567999999999765332      


Q ss_pred             -----CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC----CCCCchHHHHHHHHHHH
Q 047677           75 -----VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS----SIPETFKENAVEILRIA  145 (200)
Q Consensus        75 -----~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li  145 (200)
                           .+.++|||||||++|+|+.|+.||....+              ....+..+.++    .+|......  .+++++
T Consensus       544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--------------~~aKl~aI~~P~~~Iefp~~~~~~--~li~~m  607 (677)
T KOG0596|consen  544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--------------QIAKLHAITDPNHEIEFPDIPEND--ELIDVM  607 (677)
T ss_pred             CcceeecCccchhhhhhHHHHHHhcCCchHHHHH--------------HHHHHHhhcCCCccccccCCCCch--HHHHHH
Confidence                 46789999999999999999999963211              11222222232    222222221  288899


Q ss_pred             HHhcCCCCCCCCCHHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ..||++||.+|||+.++|+.
T Consensus       608 K~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  608 KCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHhcCcccCCCcHHHhcC
Confidence            99999999999999999863


No 26 
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96  E-value=4e-29  Score=189.98  Aligned_cols=156  Identities=21%  Similarity=0.286  Sum_probs=113.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-----ceeeeecccccccccccccCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-----DTTHVIAGTTGYIAPEYGYTSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~pE~~~~~~~   75 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.........     .......|++.|+|||...+..+
T Consensus       134 qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~  210 (294)
T PHA02882        134 DMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV  210 (294)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCC
Confidence            6889999999   899999999999999999999999999999766432211     11122358999999999988889


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||+++++++|..||.................      ..........  .......+.+++..||..+|++
T Consensus       211 ~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  282 (294)
T PHA02882        211 TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF------IKRLHEGKIK--IKNANKFIYDFIECVTKLSYEE  282 (294)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH------HHHhhhhhhc--cCCCCHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999976533222111110000      0000001000  0111346788999999999999


Q ss_pred             CCCHHHHHHHHH
Q 047677          156 RPTMRSVVQMLE  167 (200)
Q Consensus       156 Rpt~~~il~~L~  167 (200)
                      ||++.++++.|+
T Consensus       283 rp~~~~l~~~~~  294 (294)
T PHA02882        283 KPDYDALIKIFD  294 (294)
T ss_pred             CCCHHHHHHhhC
Confidence            999999998763


No 27 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.96  E-value=3.2e-29  Score=186.41  Aligned_cols=165  Identities=22%  Similarity=0.328  Sum_probs=119.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~   78 (200)
                      ||.+||+|||   +.||+||||||+|++++.+ |.+||+|||.|+.+..+.....   -..+..|.|||.+.+. .|+.+
T Consensus       133 Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniS---YicSRyYRaPELifga~~Yt~~  206 (364)
T KOG0658|consen  133 QLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNIS---YICSRYYRAPELIFGATEYTTS  206 (364)
T ss_pred             HHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCcee---EEEeccccCHHHHcCccccCce
Confidence            7899999999   8999999999999999876 9999999999998876543322   2358889999998876 58999


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC-----C--------C-chHHHHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI-----P--------E-TFKENAVEILRI  144 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~-~~~~~~~~~~~l  144 (200)
                      .||||.||++.||+-|++.|.... ....+...+.............+++.+     |        . ......++.+++
T Consensus       207 IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dl  285 (364)
T KOG0658|consen  207 IDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDL  285 (364)
T ss_pred             eEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHH
Confidence            999999999999999999998633 222333332222221111111111111     1        1 234445678899


Q ss_pred             HHHhcCCCCCCCCCHHHHHH--HHHhhCCC
Q 047677          145 AVLCTTTQPALRPTMRSVVQ--MLEEAEPC  172 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~--~L~~~~~~  172 (200)
                      +.++|..+|.+|.++.+++.  .++.+...
T Consensus       286 l~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  286 LSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             HHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            99999999999999999884  45555544


No 28 
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96  E-value=3.2e-29  Score=188.15  Aligned_cols=151  Identities=28%  Similarity=0.405  Sum_probs=112.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++.................+..|++||...+..++.++|
T Consensus       121 ~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  197 (273)
T cd05035         121 DIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccc
Confidence            5789999999   8999999999999999999999999999987665433221111222456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ........             .......+......+.+++.+||+.||.+|||+
T Consensus       198 v~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  262 (273)
T cd05035         198 VWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLR-------------HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTF  262 (273)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999999 8888864322  11111111             011111122234578889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       263 ~e~~~~l~~~  272 (273)
T cd05035         263 TKLREVLENI  272 (273)
T ss_pred             HHHHHHHHhh
Confidence            9999999875


No 29 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96  E-value=2.4e-29  Score=189.56  Aligned_cols=150  Identities=27%  Similarity=0.408  Sum_probs=112.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||.+................++..|+|||.+.+..++.++|
T Consensus       130 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05049         130 QIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhh
Confidence            5789999999   8999999999999999999999999999986543322111111223467899999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .....+.             ....+.........+.+++.+||..||++|||+
T Consensus       207 i~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  271 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYGLSNE--EVIECIT-------------QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINI  271 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            9999999999998 99998644321  1111111             111111112233567889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       272 ~eil~~l~~  280 (280)
T cd05049         272 KDIHERLQK  280 (280)
T ss_pred             HHHHHHhhC
Confidence            999999863


No 30 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96  E-value=3.2e-29  Score=192.27  Aligned_cols=157  Identities=24%  Similarity=0.352  Sum_probs=115.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.................+..|++||.+.+..++.++|
T Consensus       117 qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  193 (316)
T cd05108         117 QIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSD  193 (316)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhh
Confidence            6889999999   8999999999999999999999999999997665332211111122356799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........    .         .............+.+++.+||..+|.+|||+
T Consensus       194 i~slGv~l~el~t~g~~p~~~~~~--~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~  258 (316)
T cd05108         194 VWSYGVTVWELMTFGSKPYDGIPA--SEISSILE----K---------GERLPQPPICTIDVYMIMVKCWMIDADSRPKF  258 (316)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHh----C---------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999997 8999864321  11111110    0         00001111122467889999999999999999


Q ss_pred             HHHHHHHHhhCCCCcc
Q 047677          160 RSVVQMLEEAEPCNLV  175 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~  175 (200)
                      .+++..|..+......
T Consensus       259 ~~l~~~l~~~~~~~~~  274 (316)
T cd05108         259 RELIIEFSKMARDPQR  274 (316)
T ss_pred             HHHHHHHHHHHcCCch
Confidence            9999999988766543


No 31 
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96  E-value=1.2e-29  Score=204.83  Aligned_cols=147  Identities=27%  Similarity=0.430  Sum_probs=111.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++................|++.|+|||++.+..++.++|
T Consensus       151 qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~D  227 (496)
T PTZ00283        151 QVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKAD  227 (496)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHH
Confidence            5789999999   8999999999999999999999999999987654332222222345889999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||.....  .....             ..........+......+.+++.+||+.||.+||++.
T Consensus       228 VwSlGvilyeLltG~~Pf~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~  292 (496)
T PTZ00283        228 MFSLGVLLYELLTLKRPFDGENM--EEVMH-------------KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSS  292 (496)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCH--HHHHH-------------HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence            99999999999999999964321  11111             0111111111222334688899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       293 ell~~  297 (496)
T PTZ00283        293 KLLNM  297 (496)
T ss_pred             HHHhC
Confidence            98763


No 32 
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96  E-value=4.7e-29  Score=188.08  Aligned_cols=155  Identities=25%  Similarity=0.373  Sum_probs=114.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||++..++.++|+|||++................++..|++||...+..++.++|
T Consensus       117 qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05109         117 QIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhH
Confidence            6889999999   8999999999999999999999999999987664322111111112356799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ......+.             ..............+.+++.+||..||++||++
T Consensus       194 i~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~  258 (279)
T cd05109         194 VWSYGVTVWELMTFGAKPYDGIPA--REIPDLLE-------------KGERLPQPPICTIDVYMIMVKCWMIDSECRPRF  258 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-------------CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999998 8889864321  11111111             000111111233467889999999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|+.+....
T Consensus       259 ~~l~~~l~~~~~~~  272 (279)
T cd05109         259 RELVDEFSRMARDP  272 (279)
T ss_pred             HHHHHHHHHhhcCC
Confidence            99999998886655


No 33 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96  E-value=3.5e-29  Score=196.24  Aligned_cols=152  Identities=28%  Similarity=0.451  Sum_probs=112.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||.||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       222 qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  298 (375)
T cd05104         222 QVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  298 (375)
T ss_pred             HHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCC
Confidence            5889999999   8999999999999999999999999999987654332211111122456799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....... .....+.    ..      .....+.   ....++.+++.+||+.||++|||+
T Consensus       299 i~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~----~~------~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~  364 (375)
T cd05104         299 VWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIK----EG------YRMLSPE---CAPSEMYDIMKSCWDADPLKRPTF  364 (375)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHH----hC------ccCCCCC---CCCHHHHHHHHHHccCChhHCcCH
Confidence            9999999999998 888886543221 1111111    00      0011111   123468889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|++.
T Consensus       365 ~eil~~l~~~  374 (375)
T cd05104         365 KQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHhh
Confidence            9999999863


No 34 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=2.1e-29  Score=195.41  Aligned_cols=150  Identities=25%  Similarity=0.389  Sum_probs=113.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CC-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VD-E   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~-~   77 (200)
                      |++.|++|+|   ++||+||||||+|++++.+ +++||+|||++......  ........|++.|+|||++.+.. |. .
T Consensus       128 Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~--~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~  202 (370)
T KOG0583|consen  128 QLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE--DGLLKTFCGSPAYAAPEVLSGKGTYSGK  202 (370)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC--CCcccCCCCCcccCCHHHhCCCCCcCCc
Confidence            7899999999   8999999999999999999 99999999999877411  12223345899999999999887 75 7


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||+|+++|.|++|..||......  .....           .....-.+|....  ..++..++.+|+..||.+|+
T Consensus       203 ~aDvWS~GViLy~ml~G~~PF~d~~~~--~l~~k-----------i~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~  267 (370)
T KOG0583|consen  203 AADVWSLGVILYVLLCGRLPFDDSNVP--NLYRK-----------IRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRI  267 (370)
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCCccHH--HHHHH-----------HhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCC
Confidence            899999999999999999999862111  00000           0011112223221  55778899999999999999


Q ss_pred             CHHHHHHHHHhhCC
Q 047677          158 TMRSVVQMLEEAEP  171 (200)
Q Consensus       158 t~~~il~~L~~~~~  171 (200)
                      |+.+++ .-.-+..
T Consensus       268 t~~~i~-~h~w~~~  280 (370)
T KOG0583|consen  268 TLLEIL-EHPWFQK  280 (370)
T ss_pred             CHHHHh-hChhhcc
Confidence            999998 4444443


No 35 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96  E-value=5.4e-29  Score=189.99  Aligned_cols=157  Identities=22%  Similarity=0.323  Sum_probs=110.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|+|||++....++.++|
T Consensus       146 ~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (304)
T cd05096         146 QIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASD  222 (304)
T ss_pred             HHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhh
Confidence            5789999999   8999999999999999999999999999987654322111112223467899999988888999999


Q ss_pred             hhhHhHHHHHHHh--CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT--GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +||||+++|++++  +..||.....  ................      .............+.+++.+||..||.+|||
T Consensus       223 v~slG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs  294 (304)
T cd05096         223 VWAFGVTLWEILMLCKEQPYGELTD--EQVIENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPS  294 (304)
T ss_pred             hHHHHHHHHHHHHccCCCCCCcCCH--HHHHHHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcC
Confidence            9999999999987  4566654321  1111111111000000      0000011122346788999999999999999


Q ss_pred             HHHHHHHHHh
Q 047677          159 MRSVVQMLEE  168 (200)
Q Consensus       159 ~~~il~~L~~  168 (200)
                      +.++.+.|++
T Consensus       295 ~~~i~~~l~~  304 (304)
T cd05096         295 FSDIHAFLTE  304 (304)
T ss_pred             HHHHHHHHhC
Confidence            9999998863


No 36 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96  E-value=2.8e-29  Score=202.31  Aligned_cols=146  Identities=27%  Similarity=0.403  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++||+||||||+||+++.++.++|+|||++................|++.|+|||++.+..++.++|
T Consensus       177 qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  253 (478)
T PTZ00267        177 QIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKAD  253 (478)
T ss_pred             HHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHh
Confidence            5789999999   8999999999999999999999999999997654332222223345899999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|+|++|..||.....  ......+             .....+..+......+.+++.+||..||++||++.
T Consensus       254 v~slG~~l~el~tg~~Pf~~~~~--~~~~~~~-------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~  318 (478)
T PTZ00267        254 MWSLGVILYELLTLHRPFKGPSQ--REIMQQV-------------LYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQ  318 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH-------------HhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHH
Confidence            99999999999999999964321  1111111             11111111222334688899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       319 ~~l~  322 (478)
T PTZ00267        319 QLLH  322 (478)
T ss_pred             HHHh
Confidence            8864


No 37 
>PHA02988 hypothetical protein; Provisional
Probab=99.96  E-value=3.4e-29  Score=189.41  Aligned_cols=150  Identities=27%  Similarity=0.338  Sum_probs=112.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC--CCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT--SKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~--~~~~~~   78 (200)
                      |++.||.|||.  ..+++||||||+||+++.++.++++|||++.......     ....++..|+|||+..+  ..++.+
T Consensus       130 ~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k  202 (283)
T PHA02988        130 DCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIK  202 (283)
T ss_pred             HHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccch
Confidence            57899999994  2488999999999999999999999999986543221     12346788999999865  578999


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+|||||++|++++|..||.....  ......+.   ...      .....+   ......+.+++.+||+.||.+|||
T Consensus       203 ~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i~---~~~------~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps  268 (283)
T PHA02988        203 DDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLII---NKN------NSLKLP---LDCPLEIKCIVEACTSHDSIKRPN  268 (283)
T ss_pred             hhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH---hcC------CCCCCC---CcCcHHHHHHHHHHhcCCcccCcC
Confidence            9999999999999999999975421  11111111   000      011111   123446888999999999999999


Q ss_pred             HHHHHHHHHhhCC
Q 047677          159 MRSVVQMLEEAEP  171 (200)
Q Consensus       159 ~~~il~~L~~~~~  171 (200)
                      ++++++.|+..+.
T Consensus       269 ~~ell~~l~~~~~  281 (283)
T PHA02988        269 IKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988754


No 38 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.96  E-value=6.3e-29  Score=177.91  Aligned_cols=159  Identities=23%  Similarity=0.330  Sum_probs=115.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      ++++||+|||   ++.|+||||||.|++++.+|.+|++|||+++.+..........  .-|..|.|||.+++. .|....
T Consensus       109 m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~--V~TRWYRAPELLfGsr~Yg~~V  183 (318)
T KOG0659|consen  109 MTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ--VVTRWYRAPELLFGSRQYGTGV  183 (318)
T ss_pred             HHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc--eeeeeccChHHhccchhcCCcc
Confidence            4678999999   8999999999999999999999999999999887665443332  358899999998876 588999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhccc----------chhhhhc---cCCCCCchHHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSK----------QSVLTLV---DSSIPETFKENAVEILRIAV  146 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~li~  146 (200)
                      |+||.||++.|++.+.+.|... .+-+++...+.......          ..+.+..   .+.....+.....+.++++.
T Consensus       184 DmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~  262 (318)
T KOG0659|consen  184 DMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLS  262 (318)
T ss_pred             hhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHH
Confidence            9999999999999776665543 33333333322111111          1111111   11111124555667899999


Q ss_pred             HhcCCCCCCCCCHHHHHHH
Q 047677          147 LCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       147 ~cl~~dp~~Rpt~~~il~~  165 (200)
                      +||..||.+|+|++|+++.
T Consensus       263 ~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  263 KMLTYNPKKRITASQALKH  281 (318)
T ss_pred             hhhccCchhcccHHHHhcc
Confidence            9999999999999999876


No 39 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.1e-29  Score=185.50  Aligned_cols=160  Identities=25%  Similarity=0.324  Sum_probs=112.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |++.||+|+|   +-|++||||||.|++++.+..+|++|||+++...........+..+.|..|.|||+... ..|+...
T Consensus       133 QiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~ai  209 (359)
T KOG0660|consen  133 QILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAI  209 (359)
T ss_pred             HHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchh
Confidence            7899999999   89999999999999999999999999999988754311111122346889999998654 5689999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCc-------------hhHHHHHHHhhcccchhhhhccCCCCCc----hHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGEN-------------KDIVRWVCSHFNSKQSVLTLVDSSIPET----FKENAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  142 (200)
                      ||||.||++.||++|++.|.....-.             .+....+...  ........+...-+..    +....+..+
T Consensus       210 DiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~--~ar~yi~slp~~p~~~f~~~fp~a~p~Ai  287 (359)
T KOG0660|consen  210 DIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE--KARPYIKSLPQIPKQPFSSIFPNANPLAI  287 (359)
T ss_pred             hhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH--HHHHHHHhCCCCCCCCHHHHcCCCCHHHH
Confidence            99999999999999999886543211             1111111100  0000111111111111    233445678


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      +++.+||..||.+|+|++|+++.
T Consensus       288 dLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  288 DLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHHHHHhccCccccCCHHHHhcC
Confidence            89999999999999999999864


No 40 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96  E-value=1.5e-29  Score=194.74  Aligned_cols=143  Identities=25%  Similarity=0.397  Sum_probs=108.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|
T Consensus       103 qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05571         103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--cccceecCccccChhhhcCCCCCcccc
Confidence            6889999999   89999999999999999999999999999865332211  122245899999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +||+||++|++++|..||.....  ......+.   .        ....++.   .....+.+++.+||+.||++||   
T Consensus       178 iwSlG~il~elltg~~Pf~~~~~--~~~~~~~~---~--------~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~  241 (323)
T cd05571         178 WWGLGVVMYEMMCGRLPFYNQDH--EKLFELIL---M--------EEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGG  241 (323)
T ss_pred             CcccchhhhhhhcCCCCCCCCCH--HHHHHHHH---c--------CCCCCCC---CCCHHHHHHHHHHccCCHHHcCCCC
Confidence            99999999999999999964321  11111110   0        0111222   2334677899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.++++
T Consensus       242 ~~~~~~ll~  250 (323)
T cd05571         242 PEDAKEIME  250 (323)
T ss_pred             CCCHHHHHc
Confidence              7888875


No 41 
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.96  E-value=5.8e-29  Score=187.95  Aligned_cols=166  Identities=27%  Similarity=0.342  Sum_probs=113.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-eeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||.|||   ++|++|+||||+||+++.++.++|+|||++........... .....++..|++||......++.++
T Consensus       115 ~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~  191 (283)
T cd05080         115 QICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYAS  191 (283)
T ss_pred             HHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCccc
Confidence            5789999999   89999999999999999999999999999876543221111 1112245569999998888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC-CCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS-SIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|++++|..||................ ............. ............+.+++.+||+.+|.+|||
T Consensus       192 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps  270 (283)
T cd05080         192 DVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG-QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT  270 (283)
T ss_pred             ccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc-ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCC
Confidence            99999999999999999986543221111100000 0000000000000 001111223357888999999999999999


Q ss_pred             HHHHHHHHHhhC
Q 047677          159 MRSVVQMLEEAE  170 (200)
Q Consensus       159 ~~~il~~L~~~~  170 (200)
                      ++++++.|+++.
T Consensus       271 ~~~i~~~l~~~~  282 (283)
T cd05080         271 FRSLIPILKEMH  282 (283)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999875


No 42 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96  E-value=9.2e-29  Score=186.62  Aligned_cols=155  Identities=23%  Similarity=0.359  Sum_probs=114.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||.+................++..|++||...+..++.++|
T Consensus       117 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  193 (279)
T cd05111         117 QIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhh
Confidence            6889999999   8999999999999999999999999999987654322111111233566899999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .....+.    .. .     ....+.   .....+..++.+||..||.+|||+
T Consensus       194 v~slG~il~el~t~g~~p~~~~~~~--~~~~~~~----~~-~-----~~~~~~---~~~~~~~~li~~c~~~~p~~Rps~  258 (279)
T cd05111         194 VWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLE----KG-E-----RLAQPQ---ICTIDVYMVMVKCWMIDENVRPTF  258 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH----CC-C-----cCCCCC---CCCHHHHHHHHHHcCCCcccCcCH
Confidence            9999999999998 99998654211  1111110    00 0     000111   122356778899999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|..+..-.
T Consensus       259 ~el~~~l~~~~~~~  272 (279)
T cd05111         259 KELANEFTRMARDP  272 (279)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999998876533


No 43 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.96  E-value=2.2e-29  Score=190.85  Aligned_cols=156  Identities=25%  Similarity=0.314  Sum_probs=109.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++.......   ......++..|+|||.+.+..++.++|
T Consensus       118 qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  191 (290)
T cd07862         118 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVD  191 (290)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccc
Confidence            6889999999   8999999999999999999999999999987654321   112234788999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc--ccchhh-------hhccCCCCCc----hHHHHHHHHHHHHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN--SKQSVL-------TLVDSSIPET----FKENAVEILRIAVL  147 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~----~~~~~~~~~~li~~  147 (200)
                      +|||||++|++++|..||......  .....+.....  ......       .......+..    .......+.+++.+
T Consensus       192 iwslG~il~el~~g~~~f~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  269 (290)
T cd07862         192 LWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK  269 (290)
T ss_pred             hHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHH
Confidence            999999999999999999754321  11111110000  000000       0000000000    11223456789999


Q ss_pred             hcCCCCCCCCCHHHHHH
Q 047677          148 CTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       148 cl~~dp~~Rpt~~~il~  164 (200)
                      ||+.||++|||+.++++
T Consensus       270 ~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         270 CLTFNPAKRISAYSALS  286 (290)
T ss_pred             HhccCchhcCCHHHHhc
Confidence            99999999999999974


No 44 
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96  E-value=5.9e-29  Score=176.66  Aligned_cols=143  Identities=27%  Similarity=0.396  Sum_probs=111.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC---CCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE---FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~   77 (200)
                      ||++||.|+|   .+||||||+||.|+++..   ..-+||+|||++....   .........|++.|++||+++...++.
T Consensus       118 QiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~k  191 (355)
T KOG0033|consen  118 QILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSK  191 (355)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCC
Confidence            7899999999   899999999999999953   4568999999998876   234444567999999999999999999


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC---CCchHHHHHHHHHHHHHhcCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI---PETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      .+|||+.|+++|-++.|..||....  ...+.+.+             +...+   ++.+....++..+++.+||..||.
T Consensus       192 pvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I-------------~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~  256 (355)
T KOG0033|consen  192 PVDIWACGVILYILLVGYPPFWDED--QHRLYEQI-------------KAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPK  256 (355)
T ss_pred             cchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHH-------------hccccCCCCcccCcCCHHHHHHHHHHhccChh
Confidence            9999999999999999999997421  11111111             11111   112334445667788899999999


Q ss_pred             CCCCHHHHHH
Q 047677          155 LRPTMRSVVQ  164 (200)
Q Consensus       155 ~Rpt~~~il~  164 (200)
                      +|+|+.|++.
T Consensus       257 kRIta~EAL~  266 (355)
T KOG0033|consen  257 KRITADEALK  266 (355)
T ss_pred             hhccHHHHhC
Confidence            9999998864


No 45 
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.96  E-value=4.3e-29  Score=189.49  Aligned_cols=151  Identities=30%  Similarity=0.429  Sum_probs=111.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||.+................++..|++||...+..++.++|
T Consensus       140 qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  216 (293)
T cd05053         140 QVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD  216 (293)
T ss_pred             HHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence            5789999999   8999999999999999999999999999987654322111111112356799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .......             ....+.........+.+++.+||..||.+|||+
T Consensus       217 i~slG~il~el~~~g~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  281 (293)
T cd05053         217 VWSFGVLLWEIFTLGGSPYPGIPVE--ELFKLLK-------------EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTF  281 (293)
T ss_pred             eeehhhHHHHHhcCCCCCCCCCCHH--HHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            9999999999997 88888643211  1111100             010111112223468889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       282 ~eil~~l~~~  291 (293)
T cd05053         282 KQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHHh
Confidence            9999999875


No 46 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96  E-value=5.2e-29  Score=188.04  Aligned_cols=150  Identities=26%  Similarity=0.369  Sum_probs=110.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       130 qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05092         130 QIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhh
Confidence            5789999999   8999999999999999999999999999986553322111111122457899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.......  .....             ...............+.+++.+||..||.+||++
T Consensus       207 i~slG~il~el~~~g~~p~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~  271 (280)
T cd05092         207 IWSFGVVLWEIFTYGKQPWYQLSNTE--AIECI-------------TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVI  271 (280)
T ss_pred             HHHHHHHHHHHHcCCCCCCccCCHHH--HHHHH-------------HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9999999999998 888986432211  11100             0111111111223467789999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       272 ~~l~~~l~~  280 (280)
T cd05092         272 KDIHSRLQA  280 (280)
T ss_pred             HHHHHHHhC
Confidence            999998863


No 47 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96  E-value=4.1e-29  Score=188.26  Aligned_cols=150  Identities=24%  Similarity=0.430  Sum_probs=109.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||||.||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       127 ~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05062         127 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  203 (277)
T ss_pred             HHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhH
Confidence            5789999999   7899999999999999999999999999986544322111111122466799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.             ....+.........+.+++.+||+.||++|||+
T Consensus       204 i~slG~~l~el~~~~~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  268 (277)
T cd05062         204 VWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVM-------------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF  268 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999999 6788864321  11111111             011111111223467889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       269 ~e~l~~l~~  277 (277)
T cd05062         269 LEIISSIKE  277 (277)
T ss_pred             HHHHHHhhC
Confidence            999998863


No 48 
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.96  E-value=4.7e-29  Score=177.00  Aligned_cols=153  Identities=27%  Similarity=0.431  Sum_probs=113.6

Q ss_pred             ChhhhhhhhhcCCCCC--eEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-------ceeeeeccccccccccccc
Q 047677            1 GAAKGLEYLHHGCARP--VIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-------DTTHVIAGTTGYIAPEYGY   71 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~g--i~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~~~~pE~~~   71 (200)
                      +|++||++||   +..  +.||||||.||+++..+.++++|||.+...+-.-..       .......++..|.|||.+.
T Consensus       135 gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~  211 (302)
T KOG2345|consen  135 GICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN  211 (302)
T ss_pred             HHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchhee
Confidence            5889999999   666  999999999999999999999999998654321100       0111124788999999875


Q ss_pred             CC---CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC--CCCCchHHHHHHHHHHHH
Q 047677           72 TS---KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS--SIPETFKENAVEILRIAV  146 (200)
Q Consensus        72 ~~---~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~  146 (200)
                      -.   ..+.++|||||||++|.|+.|..||......+.++             .......  ..|.. ....+.+.+++.
T Consensus       212 vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl-------------aLAv~n~q~s~P~~-~~yse~l~~lik  277 (302)
T KOG2345|consen  212 VKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL-------------ALAVQNAQISIPNS-SRYSEALHQLIK  277 (302)
T ss_pred             cccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE-------------EEeeeccccccCCC-CCccHHHHHHHH
Confidence            43   36789999999999999999999997654332211             1111111  11222 225568889999


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHhhC
Q 047677          147 LCTTTQPALRPTMRSVVQMLEEAE  170 (200)
Q Consensus       147 ~cl~~dp~~Rpt~~~il~~L~~~~  170 (200)
                      +|++.||.+||++.+++..++++.
T Consensus       278 ~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  278 SMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             HHhcCCcccCCCHHHHHHHHHhhc
Confidence            999999999999999999998764


No 49 
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95  E-value=1e-28  Score=184.15  Aligned_cols=151  Identities=27%  Similarity=0.396  Sum_probs=112.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-eeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||++........... .....++..|++||.+....++.++
T Consensus       103 qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05116         103 QVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKS  179 (257)
T ss_pred             HHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchh
Confidence            6889999999   89999999999999999999999999999876543322111 1111234689999998877888999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|||||++|++++ |..||.....  ......+.    ..      .....+.   .....+.+++.+||+.||++||+
T Consensus       180 Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~----~~------~~~~~~~---~~~~~l~~li~~~~~~~p~~Rp~  244 (257)
T cd05116         180 DVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIE----SG------ERMECPQ---RCPPEMYDLMKLCWTYGVDERPG  244 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH----CC------CCCCCCC---CCCHHHHHHHHHHhccCchhCcC
Confidence            99999999999998 8999965322  11111111    00      0111122   23356788999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.+|.+.|++.
T Consensus       245 ~~~i~~~l~~~  255 (257)
T cd05116         245 FAVVELRLRNY  255 (257)
T ss_pred             HHHHHHHHhcc
Confidence            99999999864


No 50 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95  E-value=6e-29  Score=188.19  Aligned_cols=146  Identities=29%  Similarity=0.357  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......   ......|+..|+|||++.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05631         110 ELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccC
Confidence            5789999999   8999999999999999999999999999987653221   112235789999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC--
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT--  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  158 (200)
                      +|||||++|++++|..||.......... . ..          .................+.+++.+||+.||.+||+  
T Consensus       184 vwslGvil~el~~g~~pf~~~~~~~~~~-~-~~----------~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05631         184 WWGLGCLIYEMIQGQSPFRKRKERVKRE-E-VD----------RRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCR  251 (285)
T ss_pred             chhHHHHHHHHHhCCCCCCCCCcchhHH-H-HH----------HHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCC
Confidence            9999999999999999997543221100 0 00          00000001111223346778999999999999997  


Q ss_pred             ---HHHHHH
Q 047677          159 ---MRSVVQ  164 (200)
Q Consensus       159 ---~~~il~  164 (200)
                         ++++++
T Consensus       252 ~~~~~~~~~  260 (285)
T cd05631         252 GNGAAGVKQ  260 (285)
T ss_pred             CCCHHHHhc
Confidence               677765


No 51 
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95  E-value=7.8e-29  Score=187.92  Aligned_cols=154  Identities=27%  Similarity=0.392  Sum_probs=114.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       135 ~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  211 (290)
T cd05045         135 QISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD  211 (290)
T ss_pred             HHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhH
Confidence            5789999999   8999999999999999999999999999986553322211111223456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||....  .........          .......+   ......+.+++.+||+.+|.+||++
T Consensus       212 i~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~----------~~~~~~~~---~~~~~~~~~~i~~cl~~~P~~Rp~~  276 (290)
T cd05045         212 VWSFGVLLWEIVTLGGNPYPGIA--PERLFNLLK----------TGYRMERP---ENCSEEMYNLMLTCWKQEPDKRPTF  276 (290)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHh----------CCCCCCCC---CCCCHHHHHHHHHHccCCcccCCCH
Confidence            9999999999998 888986432  111111111          00011111   1223467889999999999999999


Q ss_pred             HHHHHHHHhhCCC
Q 047677          160 RSVVQMLEEAEPC  172 (200)
Q Consensus       160 ~~il~~L~~~~~~  172 (200)
                      .++++.|+++...
T Consensus       277 ~~i~~~l~~~~~~  289 (290)
T cd05045         277 ADISKELEKMMVK  289 (290)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988654


No 52 
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.95  E-value=7.7e-29  Score=186.57  Aligned_cols=150  Identities=28%  Similarity=0.454  Sum_probs=111.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       127 ~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05032         127 EIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSD  203 (277)
T ss_pred             HHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccc
Confidence            5789999999   8999999999999999999999999999986554332111112223567899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ........             ....+..+......+.+++.+||+.+|++|||+
T Consensus       204 i~slG~il~el~t~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  268 (277)
T cd05032         204 VWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVI-------------DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF  268 (277)
T ss_pred             hHHHHHHHHHhhccCCCCCccCCH--HHHHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            9999999999998 8888864321  11111111             011111111124578889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       269 ~~l~~~l~~  277 (277)
T cd05032         269 LEIVSSLKD  277 (277)
T ss_pred             HHHHHHhcC
Confidence            999998863


No 53 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.95  E-value=1.7e-28  Score=183.61  Aligned_cols=150  Identities=26%  Similarity=0.368  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||.+....... .........+..|++||...+..++.++|
T Consensus       112 ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (263)
T cd05052         112 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSD  187 (263)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccce-eeccCCCCCccccCCHHHhccCCCCchhH
Confidence            6889999999   8999999999999999999999999999987654321 11111112345799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ........          .......+   ......+.+++.+||..||++|||+
T Consensus       188 v~slG~il~el~t~g~~p~~~~~~--~~~~~~~~----------~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~  252 (263)
T cd05052         188 VWAFGVLLWEIATYGMSPYPGIDL--SQVYELLE----------KGYRMERP---EGCPPKVYELMRACWQWNPSDRPSF  252 (263)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH----------CCCCCCCC---CCCCHHHHHHHHHHccCCcccCCCH
Confidence            9999999999998 8888864321  11111100          00111111   1223467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+.+
T Consensus       253 ~~l~~~l~~~  262 (263)
T cd05052         253 AEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHhh
Confidence            9999999875


No 54 
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95  E-value=1.4e-28  Score=187.74  Aligned_cols=166  Identities=25%  Similarity=0.381  Sum_probs=120.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       117 qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (303)
T cd05110         117 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD  193 (303)
T ss_pred             HHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHH
Confidence            6789999999   8999999999999999999999999999997654322111111122456899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  .....+..    ..        ...+ ........+.+++..||..+|++||++
T Consensus       194 iwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~----~~--------~~~~-~~~~~~~~~~~li~~c~~~~p~~Rp~~  258 (303)
T cd05110         194 VWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE----KG--------ERLP-QPPICTIDVYMVMVKCWMIDADSRPKF  258 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH----CC--------CCCC-CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999997 8888864321  11111111    00        0000 111122467889999999999999999


Q ss_pred             HHHHHHHHhhCCCCccceeeccCcc
Q 047677          160 RSVVQMLEEAEPCNLVGIVISKDGA  184 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~~~~~~~~~~  184 (200)
                      .++++.|..+......-+....+..
T Consensus       259 ~~l~~~l~~~~~~~~~~~~~~~~~~  283 (303)
T cd05110         259 KELAAEFSRMARDPQRYLVIQGDDR  283 (303)
T ss_pred             HHHHHHHHHHHhchhhheeeccCCc
Confidence            9999999998766655555544444


No 55 
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=1.7e-28  Score=187.21  Aligned_cols=155  Identities=28%  Similarity=0.392  Sum_probs=113.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|+|||...+..++.++|
T Consensus       145 qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         145 QVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             HHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            5889999999   8999999999999999999999999999987664322211111122456799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........    ..         ............+.+++.+||+.+|.+|||+
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~----~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~  286 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK----EG---------HRMDKPANCTNELYMMMRDCWHAIPSHRPTF  286 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHH----cC---------CcCCCCCCCCHHHHHHHHHHcccChhhCCCH
Confidence            9999999999998 7777754321  11111110    00         0001111223467889999999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|.++....
T Consensus       287 ~e~l~~l~~~~~~~  300 (304)
T cd05101         287 KQLVEDLDRILTLT  300 (304)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999998876543


No 56 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95  E-value=1.3e-28  Score=186.13  Aligned_cols=150  Identities=25%  Similarity=0.409  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       132 ~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05090         132 QIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSD  208 (283)
T ss_pred             HHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhh
Confidence            5789999999   8999999999999999999999999999987654332211122223456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.    .         ...+.........+.+++.+||+.||.+||++
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~--~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  273 (283)
T cd05090         209 IWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMVR----K---------RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRF  273 (283)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH----c---------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            9999999999998 8888864321  11111111    0         01111111223467889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|.+
T Consensus       274 ~~i~~~l~~  282 (283)
T cd05090         274 KDIHTRLRS  282 (283)
T ss_pred             HHHHHHhhc
Confidence            999998865


No 57 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=2.5e-28  Score=192.22  Aligned_cols=160  Identities=20%  Similarity=0.274  Sum_probs=109.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++||+||||||+||+++..+.++|+|||++....... ........|++.|+|||++.+..++.++|
T Consensus       190 qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  265 (391)
T PHA03212        190 SVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVD  265 (391)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHH
Confidence            6889999999   8999999999999999999999999999986432211 11122345899999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCc------hhHHHHHHHhhc--------ccchhhh---------hccCCCCC---ch
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGEN------KDIVRWVCSHFN--------SKQSVLT---------LVDSSIPE---TF  134 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~--------~~~~~~~---------~~~~~~~~---~~  134 (200)
                      +|||||++|++++|..||......+      ..+...+.....        .......         ........   ..
T Consensus       266 iwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (391)
T PHA03212        266 IWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNL  345 (391)
T ss_pred             HHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence            9999999999999998875432111      111111110000        0000000         00000001   11


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          135 KENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       135 ~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ......+.+++.+||+.||.+|||+.++++
T Consensus       346 ~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        346 YELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            233457888999999999999999999985


No 58 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95  E-value=1.9e-28  Score=187.00  Aligned_cols=159  Identities=20%  Similarity=0.275  Sum_probs=107.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......++..|+|||++.+. .++.++
T Consensus       111 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (303)
T cd07869         111 QLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCL  185 (303)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHH
Confidence            6889999999   89999999999999999999999999999865432211  11123468899999987654 478889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchh-------h----hhccCCCCCchHH------HHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSV-------L----TLVDSSIPETFKE------NAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~------~~~~~~  142 (200)
                      |+||+||++|++++|..||........................       .    .......+.....      ....+.
T Consensus       186 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (303)
T cd07869         186 DMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAE  265 (303)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHH
Confidence            9999999999999999999764332222221111000000000       0    0000001111111      123577


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+||+.||.+|||+.++++
T Consensus       266 dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         266 DLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHHhccCchhccCHHHHhc
Confidence            8999999999999999999975


No 59 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95  E-value=2.6e-28  Score=182.82  Aligned_cols=151  Identities=28%  Similarity=0.431  Sum_probs=112.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       114 ~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  190 (266)
T cd05033         114 GIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASD  190 (266)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccc
Confidence            5789999999   8999999999999999999999999999997764221111111122356799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.             .....+........+.+++.+||+.+|++||++
T Consensus       191 v~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  255 (266)
T cd05033         191 VWSFGIVMWEVMSYGERPYWDMSN--QDVIKAVE-------------DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTF  255 (266)
T ss_pred             hHHHHHHHHHHHccCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            9999999999998 9889864321  11111111             000001112233467899999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       256 ~ei~~~l~~~  265 (266)
T cd05033         256 SQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHhh
Confidence            9999999875


No 60 
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95  E-value=1.8e-28  Score=183.13  Aligned_cols=150  Identities=30%  Similarity=0.460  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||||.||+++.++.++|+|||++........ .......++..|+|||......++.++|
T Consensus       111 ~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05072         111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHHhccCCCChhhh
Confidence            5789999999   78999999999999999999999999999976543221 1111122456799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ......+.   .  .     .  .. +........+.+++.+||..+|++|||+
T Consensus       187 i~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~---~--~-----~--~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         187 VWSFGILLYEIVTYGKIPYPGMSN--SDVMSALQ---R--G-----Y--RM-PRMENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             hhhhHHHHHHHHccCCCCCCCCCH--HHHHHHHH---c--C-----C--CC-CCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            9999999999998 8999864321  11111111   0  0     0  00 1111223467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      +++++.|+++
T Consensus       252 ~~i~~~l~~~  261 (261)
T cd05072         252 DYLQSVLDDF  261 (261)
T ss_pred             HHHHHHHhcC
Confidence            9999999864


No 61 
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95  E-value=5.2e-28  Score=181.13  Aligned_cols=152  Identities=23%  Similarity=0.405  Sum_probs=115.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+........  ......++..|++||...+..++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~D  188 (267)
T cd08228         114 QLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhh
Confidence            5789999999   89999999999999999999999999999876543221  111234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|+++|++++|..||.............+.             ....+.. .......+.+++.+||..+|.+||++
T Consensus       189 i~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  255 (267)
T cd08228         189 IWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-------------QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDI  255 (267)
T ss_pred             HHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-------------cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCH
Confidence            999999999999999998654322211111110             0111111 22334578899999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      .++++.|+.+.
T Consensus       256 ~~vl~~~~~~~  266 (267)
T cd08228         256 GYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHhc
Confidence            99999998764


No 62 
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.95  E-value=1.8e-28  Score=184.98  Aligned_cols=153  Identities=27%  Similarity=0.362  Sum_probs=113.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||++..++.++++|||+++.+.............++..|+|||.+.+..++.++|
T Consensus       125 ~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  201 (280)
T cd05043         125 QIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASD  201 (280)
T ss_pred             HHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhh
Confidence            5789999999   8999999999999999999999999999987553322111111123456799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ........   . ..        . ..........+.+++.+||..||++|||+
T Consensus       202 i~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~---~-~~--------~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~  266 (280)
T cd05043         202 VWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLK---D-GY--------R-LAQPINCPDELFAVMACCWALDPEERPSF  266 (280)
T ss_pred             HHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHH---c-CC--------C-CCCCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence            9999999999998 9999864321  11111111   0 00        0 00111123467889999999999999999


Q ss_pred             HHHHHHHHhhCC
Q 047677          160 RSVVQMLEEAEP  171 (200)
Q Consensus       160 ~~il~~L~~~~~  171 (200)
                      .++++.|+++..
T Consensus       267 ~~~~~~l~~~~~  278 (280)
T cd05043         267 SQLVQCLTDFHA  278 (280)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754


No 63 
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95  E-value=2.1e-28  Score=186.20  Aligned_cols=153  Identities=27%  Similarity=0.362  Sum_probs=111.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++.......   .......+..|++||...+..++.++|
T Consensus       127 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  200 (297)
T cd05089         127 DVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSD  200 (297)
T ss_pred             HHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhh
Confidence            5788999999   8999999999999999999999999999875322110   011111245699999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.......  .....          ........+   ......+.+++.+||..+|.+|||+
T Consensus       201 vwSlG~il~el~t~g~~pf~~~~~~~--~~~~~----------~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~  265 (297)
T cd05089         201 VWSFGVLLWEIVSLGGTPYCGMTCAE--LYEKL----------PQGYRMEKP---RNCDDEVYELMRQCWRDRPYERPPF  265 (297)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH----------hcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999997 999996432211  11100          000011111   1223467889999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      +++++.|+.+.....
T Consensus       266 ~~i~~~l~~~~~~~~  280 (297)
T cd05089         266 AQISVQLSRMLEARK  280 (297)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999988876553


No 64 
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95  E-value=5.2e-29  Score=201.95  Aligned_cols=156  Identities=26%  Similarity=0.422  Sum_probs=127.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |||.|+.||-   ++-+|||||-..|++|+.+..+||+|||+++...+...........-..+|||||.+..++++.++|
T Consensus       611 QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSD  687 (774)
T KOG1026|consen  611 QIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESD  687 (774)
T ss_pred             HHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhh
Confidence            7999999999   6779999999999999999999999999998776655444332233467899999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |||+|+++||+++ |..||....++  +..+.+             -.+...+.+.....+++.||..||+.+|.+||++
T Consensus       688 VWs~GVvLWEIFsyG~QPy~glSn~--EVIe~i-------------~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF  752 (774)
T KOG1026|consen  688 VWSFGVVLWEIFSYGKQPYYGLSNQ--EVIECI-------------RAGQLLSCPENCPTEVYSLMLECWNENPKRRPSF  752 (774)
T ss_pred             hhhhhhhhhhhhccccCcccccchH--HHHHHH-------------HcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCH
Confidence            9999999999998 88999865433  222222             2233344555566689999999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      ++|...|.++.+...
T Consensus       753 ~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  753 KEIHSRLQAWAQASP  767 (774)
T ss_pred             HHHHHHHHHHHhcCc
Confidence            999999998876544


No 65 
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95  E-value=2.4e-28  Score=185.07  Aligned_cols=157  Identities=23%  Similarity=0.406  Sum_probs=115.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       127 ~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  203 (288)
T cd05061         127 EIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSD  203 (288)
T ss_pred             HHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhH
Confidence            5789999999   8999999999999999999999999999986543322111111122456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ......+             .....+.........+.+++.+||+.||++|||+
T Consensus       204 vwslG~~l~el~~~~~~p~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  268 (288)
T cd05061         204 MWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV-------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF  268 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-------------HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            9999999999998 7888864322  1111111             1111111111223578889999999999999999


Q ss_pred             HHHHHHHHhhCCCCcc
Q 047677          160 RSVVQMLEEAEPCNLV  175 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~  175 (200)
                      .++++.|.+.......
T Consensus       269 ~~ll~~l~~~~~~~~~  284 (288)
T cd05061         269 LEIVNLLKDDLHPSFP  284 (288)
T ss_pred             HHHHHHHHhhcCCCCC
Confidence            9999999987655443


No 66 
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=2.6e-28  Score=187.11  Aligned_cols=154  Identities=29%  Similarity=0.426  Sum_probs=112.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||.+................++..|++||.+.+..++.++|
T Consensus       142 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (314)
T cd05099         142 QVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD  218 (314)
T ss_pred             HHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence            5789999999   8999999999999999999999999999987554321111111112345799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........             ..............+.+++.+||+.+|++|||+
T Consensus       219 iwslG~~l~el~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (314)
T cd05099         219 VWSFGILMWEIFTLGGSPYPGIPV--EELFKLLR-------------EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTF  283 (314)
T ss_pred             hhHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            9999999999999 8888854321  11111111             000011111223467789999999999999999


Q ss_pred             HHHHHHHHhhCCC
Q 047677          160 RSVVQMLEEAEPC  172 (200)
Q Consensus       160 ~~il~~L~~~~~~  172 (200)
                      .++++.|.++...
T Consensus       284 ~~ll~~l~~~~~~  296 (314)
T cd05099         284 KQLVEALDKVLAA  296 (314)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987653


No 67 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.95  E-value=2.3e-28  Score=181.72  Aligned_cols=149  Identities=28%  Similarity=0.363  Sum_probs=107.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++.................+..|++||.+.+..++.++|
T Consensus       102 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  178 (252)
T cd05084         102 NAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESD  178 (252)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHH
Confidence            5789999999   8999999999999999999999999999986543211110011111245699999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .......          .......   .......+.+++.+||+.+|++|||+
T Consensus       179 v~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~----------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~  243 (252)
T cd05084         179 VWSFGILLWEAFSLGAVPYANLSNQ--QTREAIE----------QGVRLPC---PELCPDAVYRLMERCWEYDPGQRPSF  243 (252)
T ss_pred             HHHHHHHHHHHHhCCCCCccccCHH--HHHHHHH----------cCCCCCC---cccCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999998 88888643221  1111000          0001111   11223467889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|+
T Consensus       244 ~~~~~~l~  251 (252)
T cd05084         244 STVHQELQ  251 (252)
T ss_pred             HHHHHHHh
Confidence            99999886


No 68 
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95  E-value=4.6e-28  Score=180.97  Aligned_cols=150  Identities=30%  Similarity=0.434  Sum_probs=111.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......... .........|++||...+..++.++|
T Consensus       111 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05068         111 QVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA-REGAKFPIKWTAPEAALYNRFSIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc-cCCCcCceeccCccccccCCCCchhh
Confidence            5789999999   8899999999999999999999999999987765321111 11111235799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.    ..      ....   ........+.+++.+||+.+|.+||++
T Consensus       187 i~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~----~~------~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~  251 (261)
T cd05068         187 VWSFGILLTEIVTYGRMPYPGMTN--AEVLQQVD----QG------YRMP---CPPGCPKELYDIMLDCWKEDPDDRPTF  251 (261)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH----cC------CCCC---CCCcCCHHHHHHHHHHhhcCcccCCCH
Confidence            9999999999999 8999864321  11111110    00      0001   112233578889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+.+
T Consensus       252 ~~l~~~l~~~  261 (261)
T cd05068         252 ETLQWKLEDF  261 (261)
T ss_pred             HHHHHHHhcC
Confidence            9999999864


No 69 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.95  E-value=1.7e-28  Score=182.24  Aligned_cols=159  Identities=21%  Similarity=0.271  Sum_probs=111.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |++.||+|||   ++||+||||||+|++++..|.+||+|||+++...-+...  ......|..|.|||++.+. .|+...
T Consensus       128 Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~v  202 (323)
T KOG0594|consen  128 QLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSV  202 (323)
T ss_pred             HHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCc
Confidence            7899999999   899999999999999999999999999999865533221  2223357889999998876 689999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhh------hccCCCCC-----c----hHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLT------LVDSSIPE-----T----FKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~----~~~~~~~~~~l  144 (200)
                      |+||+||+++||++++..|......+ .....+.-..........      ..+..++.     .    .........++
T Consensus       203 DiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dl  281 (323)
T KOG0594|consen  203 DIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIEL  281 (323)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHH
Confidence            99999999999999998887654422 222211111110000000      00001111     1    11111367789


Q ss_pred             HHHhcCCCCCCCCCHHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~~  165 (200)
                      +.+|++.+|.+|.|+..++..
T Consensus       282 l~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  282 LSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHHHhccCcccCcCHHHHhcC
Confidence            999999999999999999886


No 70 
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95  E-value=2.7e-28  Score=186.08  Aligned_cols=152  Identities=26%  Similarity=0.422  Sum_probs=112.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       149 ~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  225 (302)
T cd05055         149 QVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  225 (302)
T ss_pred             HHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhH
Confidence            5789999999   8999999999999999999999999999987654332211111223567899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+||++|++++ |..||....... .+.....    ..      .....   .......+.+++.+||..+|++|||+
T Consensus       226 iwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~----~~------~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~  291 (302)
T cd05055         226 VWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIK----EG------YRMAQ---PEHAPAEIYDIMKTCWDADPLKRPTF  291 (302)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHH----cC------CcCCC---CCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            9999999999998 899986543211 1111110    00      00011   11123468889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       292 ~ell~~l~~~  301 (302)
T cd05055         292 KQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHHhh
Confidence            9999999875


No 71 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=1.1e-28  Score=190.33  Aligned_cols=144  Identities=23%  Similarity=0.386  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......  .......|+..|+|||++.+..++.++|
T Consensus       103 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (328)
T cd05593         103 EIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVD  177 (328)
T ss_pred             HHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCC
Confidence            6889999999   8999999999999999999999999999986532211  1112235789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||.....  ......+.   .        ....++.   .....+.+++.+||..||.+|+   
T Consensus       178 iwslGvil~elltG~~Pf~~~~~--~~~~~~~~---~--------~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~  241 (328)
T cd05593         178 WWGLGVVMYEMMCGRLPFYNQDH--EKLFELIL---M--------EDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGG  241 (328)
T ss_pred             ccccchHHHHHhhCCCCCCCCCH--HHHHHHhc---c--------CCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            99999999999999999964321  11111100   0        0111222   2234677889999999999997   


Q ss_pred             --CHHHHHHH
Q 047677          158 --TMRSVVQM  165 (200)
Q Consensus       158 --t~~~il~~  165 (200)
                        ++.++++.
T Consensus       242 ~~~~~~il~h  251 (328)
T cd05593         242 PDDAKEIMRH  251 (328)
T ss_pred             CCCHHHHhcC
Confidence              88888753


No 72 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.95  E-value=6.5e-28  Score=185.05  Aligned_cols=98  Identities=32%  Similarity=0.441  Sum_probs=79.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEe----CCCCCeeecccccceeeccCCC-cceeeeecccccccccccccCC-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILL----DEFLKPRIADFGLARIVQSNGG-KDTTHVIAGTTGYIAPEYGYTS-K   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~----~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~pE~~~~~-~   74 (200)
                      |++.||.|||   ++|++||||||+||++    ...+.++|+|||++........ ........++..|+|||++.+. .
T Consensus       116 qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07868         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCC
Confidence            6889999999   8999999999999999    4567899999999976543221 1112234578899999998764 4


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPE  101 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~  101 (200)
                      ++.++|+||+||++|++++|..||...
T Consensus       193 ~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         193 YTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            788999999999999999999999654


No 73 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95  E-value=1.1e-28  Score=190.71  Aligned_cols=160  Identities=26%  Similarity=0.347  Sum_probs=108.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc-eeeeecccccccccccccC--CCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD-TTHVIAGTTGYIAPEYGYT--SKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~--~~~~~   77 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++.......... ......++..|+|||++.+  ..++.
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  187 (338)
T cd07859         111 QLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP  187 (338)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCc
Confidence            6889999999   8999999999999999999999999999987543221111 1122357889999998765  56788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-------------ccchhhhhccCCCCCc----hHHHHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-------------SKQSVLTLVDSSIPET----FKENAVE  140 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----~~~~~~~  140 (200)
                      ++|+|||||++|++++|..||.......  ....+.....             ........+....+..    .......
T Consensus       188 ~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (338)
T cd07859         188 AIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPL  265 (338)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChH
Confidence            9999999999999999999996532211  0000000000             0000000011111111    1112346


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          141 ILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       141 ~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      +.+++.+||..||++|||++++++.
T Consensus       266 ~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         266 ALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHHHHHcCcCcccCCCHHHHhcC
Confidence            7889999999999999999999864


No 74 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95  E-value=6e-29  Score=190.51  Aligned_cols=144  Identities=26%  Similarity=0.379  Sum_probs=105.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++........  ......|++.|+|||.+.+..++.++|
T Consensus       101 qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  175 (312)
T cd05585         101 ELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KTNTFCGTPEYLAPELLLGHGYTKAVD  175 (312)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--ccccccCCcccCCHHHHcCCCCCCccc
Confidence            5789999999   89999999999999999999999999999865432211  122245789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||.....  ......+   ...        ...++.   .....+.+++.+||..||.+||++.
T Consensus       176 vwslGvil~el~tg~~pf~~~~~--~~~~~~~---~~~--------~~~~~~---~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         176 WWTLGVLLYEMLTGLPPFYDENV--NEMYRKI---LQE--------PLRFPD---GFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             eechhHHHHHHHhCCCCcCCCCH--HHHHHHH---HcC--------CCCCCC---cCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            99999999999999999974321  1111100   000        011122   2234677899999999999998644


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      .+.+.
T Consensus       240 ~~~e~  244 (312)
T cd05585         240 GAQEI  244 (312)
T ss_pred             CHHHH
Confidence            33333


No 75 
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95  E-value=2.7e-28  Score=175.79  Aligned_cols=147  Identities=31%  Similarity=0.435  Sum_probs=110.3

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC---CCCCc
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS---KVDEK   78 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~---~~~~~   78 (200)
                      +++||.||.+  .+||+|||+||+||+++..|++||+|||++.++....-.   ....|.+.|++||.+...   .|..+
T Consensus       200 ~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh---trsAGC~~YMaPERidp~~~~kYDiR  274 (391)
T KOG0983|consen  200 IVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH---TRSAGCAAYMAPERIDPPDKPKYDIR  274 (391)
T ss_pred             HHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc---ccccCCccccCccccCCCCCCccchh
Confidence            5789999998  678999999999999999999999999999877654211   123378899999987643   57889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+||||++++|+.||+.||.....+ -.....++          ....+.++.. ......+++++..||..|+.+||.
T Consensus       275 aDVWSlGITlveLaTg~yPy~~c~td-Fe~ltkvl----------n~ePP~L~~~-~gFSp~F~~fv~~CL~kd~r~RP~  342 (391)
T KOG0983|consen  275 ADVWSLGITLVELATGQYPYKGCKTD-FEVLTKVL----------NEEPPLLPGH-MGFSPDFQSFVKDCLTKDHRKRPK  342 (391)
T ss_pred             hhhhhhccchhhhhcccCCCCCCCcc-HHHHHHHH----------hcCCCCCCcc-cCcCHHHHHHHHHHhhcCcccCcc
Confidence            99999999999999999999764322 11111111          0111222222 114567888999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      ..++++.
T Consensus       343 Y~~Ll~h  349 (391)
T KOG0983|consen  343 YNKLLEH  349 (391)
T ss_pred             hHHHhcC
Confidence            9988763


No 76 
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95  E-value=2.9e-28  Score=182.01  Aligned_cols=152  Identities=30%  Similarity=0.416  Sum_probs=109.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc--eeeeecccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD--TTHVIAGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~   78 (200)
                      |+++||+|||   +.|++|+||||+||+++.++.++|+|||++..........  ......++..|+|||...+..++.+
T Consensus       106 ~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  182 (262)
T cd05058         106 QVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTK  182 (262)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchH
Confidence            5789999999   8999999999999999999999999999986543221100  1111234668999999888888999


Q ss_pred             cchhhHhHHHHHHHhC-CCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTG-KKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +|+|||||++|++++| ..||....  .........             ....+.........+.+++.+||+.+|++||
T Consensus       183 ~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  247 (262)
T cd05058         183 SDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLL-------------QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRP  247 (262)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHh-------------cCCCCCCCCcCCHHHHHHHHHHcCCChhhCC
Confidence            9999999999999995 45554321  111111110             0011111111234678899999999999999


Q ss_pred             CHHHHHHHHHhhC
Q 047677          158 TMRSVVQMLEEAE  170 (200)
Q Consensus       158 t~~~il~~L~~~~  170 (200)
                      ++.++++.|+++.
T Consensus       248 ~~~~il~~l~~~~  260 (262)
T cd05058         248 TFSELVSRIEQIF  260 (262)
T ss_pred             CHHHHHHHHHHHh
Confidence            9999999998864


No 77 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95  E-value=2.1e-28  Score=185.54  Aligned_cols=158  Identities=20%  Similarity=0.235  Sum_probs=107.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......++..|+|||.+.+ ..++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (288)
T cd07871         111 QLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPI  185 (288)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHH
Confidence            6889999999   89999999999999999999999999999865432211  1112346889999998765 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc----------ccchhhhhccCCCCCc-----hHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN----------SKQSVLTLVDSSIPET-----FKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~l  144 (200)
                      |+||+||++|++++|..||........ ..........          ..........+.....     ......++.++
T Consensus       186 DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  264 (288)
T cd07871         186 DMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDL  264 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHH
Confidence            999999999999999999975432211 1111100000          0000000000110000     01123467889


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||+.||.+|||++++++
T Consensus       265 l~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         265 LSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHhcCcCcccCCCHHHHhc
Confidence            99999999999999999974


No 78 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.95  E-value=2.5e-28  Score=184.75  Aligned_cols=159  Identities=19%  Similarity=0.236  Sum_probs=110.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||+||+++.++.++|+|||++........ .......++..|+|||++.+..++.++|
T Consensus       108 qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (287)
T cd07848         108 QLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVD  183 (287)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchh
Confidence            6889999999   89999999999999999999999999999876543211 1112234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhh----------cccchhhhhccCC--CCCc-----hHHHHHHHHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHF----------NSKQSVLTLVDSS--IPET-----FKENAVEILR  143 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~  143 (200)
                      +||+||++|++++|..||......+. .........          ...........+.  .+..     .......+.+
T Consensus       184 iwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  262 (287)
T cd07848         184 MWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLD  262 (287)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHH
Confidence            99999999999999999975432211 111000000          0000000000000  0000     1123446889


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||+.||++|||++++++
T Consensus       263 ll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         263 LMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHHHccCCcccCCCHHHHhc
Confidence            999999999999999999875


No 79 
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95  E-value=4.9e-28  Score=180.44  Aligned_cols=152  Identities=28%  Similarity=0.412  Sum_probs=112.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCccee-eeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTT-HVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~-~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   ..|++|+||||+||+++.++.++|+|||.+............ ....++..|++||...+..++.++
T Consensus       103 qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05060         103 QVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKS  179 (257)
T ss_pred             HHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccc
Confidence            5889999999   789999999999999999999999999998766443221111 111134579999999888899999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|++++ |..||.....  ......+..    .         ............+.+++.+||..+|.+|||
T Consensus       180 Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~----~---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~  244 (257)
T cd05060         180 DVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLES----G---------ERLPRPEECPQEIYSIMLSCWKYRPEDRPT  244 (257)
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHc----C---------CcCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            99999999999998 8999865422  222222110    0         000111122346788999999999999999


Q ss_pred             HHHHHHHHHhhC
Q 047677          159 MRSVVQMLEEAE  170 (200)
Q Consensus       159 ~~~il~~L~~~~  170 (200)
                      +.++++.|++..
T Consensus       245 ~~~l~~~l~~~~  256 (257)
T cd05060         245 FSELESTFRRDP  256 (257)
T ss_pred             HHHHHHHHHhcc
Confidence            999999998764


No 80 
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95  E-value=4e-28  Score=180.83  Aligned_cols=146  Identities=27%  Similarity=0.382  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++........     ....+..|++||+.....++.++|
T Consensus       110 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  181 (256)
T cd05082         110 DVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC-----CCccceeecCHHHHccCCCCchhh
Confidence            5789999999   89999999999999999999999999999865433211     112345799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....  .......+.   .       ......   .......+.+++.+||+.+|++|||+
T Consensus       182 v~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~---~-------~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~  246 (256)
T cd05082         182 VWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVE---K-------GYKMDA---PDGCPPVVYDVMKQCWHLDAATRPSF  246 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh---c-------CCCCCC---CCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            9999999999997 888886331  111111110   0       000111   11223467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+.+
T Consensus       247 ~~l~~~l~~~  256 (256)
T cd05082         247 LQLREQLEHI  256 (256)
T ss_pred             HHHHHHHhcC
Confidence            9999998753


No 81 
>PTZ00284 protein kinase; Provisional
Probab=99.95  E-value=2.9e-28  Score=196.10  Aligned_cols=154  Identities=19%  Similarity=0.217  Sum_probs=105.9

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCC----------------CeeecccccceeeccCCCcceeeeeccccc
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFL----------------KPRIADFGLARIVQSNGGKDTTHVIAGTTG   63 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~----------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~   63 (200)
                      ||+.||.|||   + .||+||||||+||+++..+                .+||+|||.+.....     ......|+..
T Consensus       239 qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~  310 (467)
T PTZ00284        239 QTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRH  310 (467)
T ss_pred             HHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-----ccccccCCcc
Confidence            6889999999   5 5999999999999997655                489999998753221     1123457899


Q ss_pred             ccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-cc------------chhhhhc---c
Q 047677           64 YIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-SK------------QSVLTLV---D  127 (200)
Q Consensus        64 ~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~---~  127 (200)
                      |+|||++.+..++.++|||||||++|+|++|+.||......  .....+..... ..            ..+....   .
T Consensus       311 Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  388 (467)
T PTZ00284        311 YRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL--EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR  388 (467)
T ss_pred             ccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc
Confidence            99999999989999999999999999999999999754321  11111100000 00            0000000   0


Q ss_pred             CCC------------CCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          128 SSI------------PETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       128 ~~~------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ...            +.........+.+|+.+||..||.+|||++|+++
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        389 PCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             ccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            000            0000011345779999999999999999999986


No 82 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95  E-value=1.8e-28  Score=188.13  Aligned_cols=140  Identities=29%  Similarity=0.405  Sum_probs=105.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......  .......|+..|+|||.+.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05592         104 EIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCccc
Confidence            6889999999   8999999999999999999999999999987543322  1122345789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||.....  ......+.           .....++..   ....+.+++.+||..||.+||++.
T Consensus       179 vwslG~il~ell~G~~Pf~~~~~--~~~~~~i~-----------~~~~~~~~~---~~~~~~~ll~~~l~~~P~~R~~~~  242 (316)
T cd05592         179 WWSFGVLLYEMLIGQSPFHGEDE--DELFDSIL-----------NDRPHFPRW---ISKEAKDCLSKLFERDPTKRLGVD  242 (316)
T ss_pred             chhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH-----------cCCCCCCCC---CCHHHHHHHHHHccCCHHHcCCCh
Confidence            99999999999999999974321  11111110           011122222   234567888899999999999875


Q ss_pred             H
Q 047677          161 S  161 (200)
Q Consensus       161 ~  161 (200)
                      +
T Consensus       243 ~  243 (316)
T cd05592         243 G  243 (316)
T ss_pred             H
Confidence            3


No 83 
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95  E-value=1.1e-27  Score=179.25  Aligned_cols=152  Identities=24%  Similarity=0.412  Sum_probs=115.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|+||+++.++.++|+|||.+.........  .....++..|++||...+..++.++|
T Consensus       114 ~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~D  188 (267)
T cd08224         114 QLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhc
Confidence            5789999999   899999999999999999999999999998765432211  11234678899999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchH-HHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFK-ENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++|..||..............             .....+..+. .....+.+++.+||..+|++|||+
T Consensus       189 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~  255 (267)
T cd08224         189 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-------------EKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDI  255 (267)
T ss_pred             HHHHHHHHHHHHHCCCCcccCCccHHHHHhhh-------------hcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCH
Confidence            99999999999999999864432211111100             0011111111 334467889999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      .++++.|+++.
T Consensus       256 ~~il~~~~~~~  266 (267)
T cd08224         256 SYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHhc
Confidence            99999998875


No 84 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95  E-value=4.6e-28  Score=188.94  Aligned_cols=158  Identities=24%  Similarity=0.251  Sum_probs=109.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........   .....++..|+|||.+.+..++.++|
T Consensus       131 qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~D  204 (359)
T cd07876         131 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYKENVD  204 (359)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc---CCCCcccCCCCCchhccCCCCCcchh
Confidence            6889999999   89999999999999999999999999999865432211   11234688999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc--------hhhhh--ccCCCC-----------------Cc
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ--------SVLTL--VDSSIP-----------------ET  133 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~-----------------~~  133 (200)
                      +|||||++|++++|..||........ +............        .....  ..+..+                 ..
T Consensus       205 iwSlG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (359)
T cd07876         205 IWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESER  283 (359)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccc
Confidence            99999999999999999975432111 1000000000000        00000  000000                 00


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .......+.+++.+||..||++|||+.++++.
T Consensus       284 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         284 DKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             ccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            11123467889999999999999999999874


No 85 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.95  E-value=1.7e-28  Score=188.31  Aligned_cols=142  Identities=27%  Similarity=0.381  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.......  .......|+..|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05620         104 EIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--CceeccCCCcCccCHHHHcCCCCCcccc
Confidence            6889999999   8999999999999999999999999999986432211  1122345789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||.....  ......+.           .....++..   ....+.+++.+||+.||.+||++.
T Consensus       179 iwslGvil~el~~g~~Pf~~~~~--~~~~~~~~-----------~~~~~~~~~---~~~~~~~li~~~l~~dP~~R~~~~  242 (316)
T cd05620         179 WWSFGVLLYEMLIGQSPFHGDDE--DELFESIR-----------VDTPHYPRW---ITKESKDILEKLFERDPTRRLGVV  242 (316)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH-----------hCCCCCCCC---CCHHHHHHHHHHccCCHHHcCCCh
Confidence            99999999999999999964321  11111110           011122222   234677899999999999999985


Q ss_pred             -HHH
Q 047677          161 -SVV  163 (200)
Q Consensus       161 -~il  163 (200)
                       +++
T Consensus       243 ~~~~  246 (316)
T cd05620         243 GNIR  246 (316)
T ss_pred             HHHH
Confidence             454


No 86 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.95  E-value=1.8e-28  Score=177.96  Aligned_cols=130  Identities=28%  Similarity=0.444  Sum_probs=104.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||+-||+|||   +++|++|||||+|||++.+|.+|++|||.+.....     ......||+.|+|||++...++..++|
T Consensus       152 eivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-----rT~TlCGTPeYLAPEii~sk~ynkavD  223 (355)
T KOG0616|consen  152 EIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-----RTWTLCGTPEYLAPEIIQSKGYNKAVD  223 (355)
T ss_pred             HHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC-----cEEEecCCccccChHHhhcCCCCcchh
Confidence            5788999999   89999999999999999999999999999987753     244566999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC--CCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS--SIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      .||||+++|||+.|.+||.....  .             ..+.+++..  .+|..+..   .+.+|+.++|+.|-.+|
T Consensus       224 WWalGVLIYEMlaG~pPF~~~~~--~-------------~iY~KI~~~~v~fP~~fs~---~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  224 WWALGVLIYEMLAGYPPFYDDNP--I-------------QIYEKILEGKVKFPSYFSS---DAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHHHHHHHcCCCCCcCCCh--H-------------HHHHHHHhCcccCCcccCH---HHHHHHHHHHhhhhHhh
Confidence            99999999999999999986543  1             112222222  23333433   45567778888888888


No 87 
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95  E-value=4.9e-28  Score=180.29  Aligned_cols=149  Identities=30%  Similarity=0.426  Sum_probs=112.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+................++..|++||.+....++.++|
T Consensus       113 ~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (262)
T cd00192         113 QIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSD  189 (262)
T ss_pred             HHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhc
Confidence            5789999999   8999999999999999999999999999997765433212222234677899999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|+++|++++ |..||.....  ........             ..............+.+++.+||..+|.+|||+
T Consensus       190 i~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  254 (262)
T cd00192         190 VWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLR-------------KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTF  254 (262)
T ss_pred             cHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCccCChHHHHHHHHHccCCcccCcCH
Confidence            9999999999999 6889875521  11111111             011111122224578889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|+
T Consensus       255 ~~l~~~l~  262 (262)
T cd00192         255 SELVERLE  262 (262)
T ss_pred             HHHHHhhC
Confidence            99998874


No 88 
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=3.8e-28  Score=191.47  Aligned_cols=162  Identities=22%  Similarity=0.291  Sum_probs=112.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++||+||||||+||+++..+.++|+|||++................|+..|++||++.+..++.++|
T Consensus       193 ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  269 (392)
T PHA03207        193 RLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTD  269 (392)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654432222223345899999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCc--hhHHHHHHHhhcccch---------------hhhhccCCC--CCch--HHHHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGEN--KDIVRWVCSHFNSKQS---------------VLTLVDSSI--PETF--KENAV  139 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~--~~~~~  139 (200)
                      +|||||++|++++|..||.......  ..+...+.........               ......+.+  +...  .....
T Consensus       270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (392)
T PHA03207        270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHM  349 (392)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcch
Confidence            9999999999999999997643321  1111111100000000               000000000  0000  01123


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          140 EILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       140 ~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+.+++.+||..||++|||+.+++..
T Consensus       350 ~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        350 DVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hHHHHHHHHhccChhhCCCHHHHhhC
Confidence            56788999999999999999999865


No 89 
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95  E-value=8e-28  Score=179.92  Aligned_cols=150  Identities=29%  Similarity=0.443  Sum_probs=112.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+........ .......++..|++||...+..++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~D  185 (262)
T cd05071         110 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSD  185 (262)
T ss_pred             HHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc-ccccCCcccceecCHhHhccCCCCchhh
Confidence            5789999999   89999999999999999999999999999876543221 1111223566799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .......             ..............+.+++.+|++.||++|||+
T Consensus       186 vwslG~~l~ellt~g~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~  250 (262)
T cd05071         186 VWSFGILLTELTTKGRVPYPGMVNR--EVLDQVE-------------RGYRMPCPPECPESLHDLMCQCWRKEPEERPTF  250 (262)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCChH--HHHHHHh-------------cCCCCCCccccCHHHHHHHHHHccCCcccCCCH
Confidence            9999999999999 78888643211  1111000             000011122334567899999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+..
T Consensus       251 ~~~~~~l~~~  260 (262)
T cd05071         251 EYLQAFLEDY  260 (262)
T ss_pred             HHHHHHHHHh
Confidence            9999999875


No 90 
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95  E-value=1.3e-27  Score=178.95  Aligned_cols=152  Identities=24%  Similarity=0.416  Sum_probs=114.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.........  .....++..|++||...+..++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~D  188 (267)
T cd08229         114 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc--cccccCCcCccCHHHhcCCCccchhh
Confidence            5789999999   899999999999999999999999999988665432211  11234778899999998888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++|..||.............             ......+.. .......+.+++.+||..||.+|||+
T Consensus       189 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  255 (267)
T cd08229         189 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKK-------------IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDI  255 (267)
T ss_pred             HHHHHHHHHHHHhCCCCcccccchHHHHhhh-------------hhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCH
Confidence            9999999999999999986432211111110             001111111 12234578889999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      .++++.+.++.
T Consensus       256 ~~i~~~~~~~~  266 (267)
T cd08229         256 TYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHhhhc
Confidence            99999998874


No 91 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=1.5e-28  Score=188.88  Aligned_cols=138  Identities=30%  Similarity=0.443  Sum_probs=104.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|
T Consensus       104 ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (320)
T cd05590         104 EITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVD  178 (320)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999865432211  122245789999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++|..||.....  ......+.   ..        ....+.   .....+.+++.+||+.||.+||++
T Consensus       179 iwslG~il~el~~g~~Pf~~~~~--~~~~~~i~---~~--------~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         179 WWAMGVLLYEMLCGHAPFEAENE--DDLFEAIL---ND--------EVVYPT---WLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             hhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHh---cC--------CCCCCC---CCCHHHHHHHHHHcccCHHHCCCC
Confidence            99999999999999999974321  11111111   00        011111   123467789999999999999998


No 92 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95  E-value=4.2e-28  Score=188.80  Aligned_cols=148  Identities=29%  Similarity=0.466  Sum_probs=106.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-----CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-----KV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-----~~   75 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|++||.+...     ..
T Consensus       176 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~  250 (353)
T PLN00034        176 QILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYD  250 (353)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--cccccccCccccCccccccccccCcCC
Confidence            6889999999   89999999999999999999999999999876543211  11223578999999987432     23


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||......  .........          .....+.........+.+++.+||+.||++
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~~P~~  318 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAI----------CMSQPPEAPATASREFRHFISCCLQREPAK  318 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHH----------hccCCCCCCCccCHHHHHHHHHHccCChhh
Confidence            46899999999999999999999732211  111111100          000111112233446888999999999999


Q ss_pred             CCCHHHHHHH
Q 047677          156 RPTMRSVVQM  165 (200)
Q Consensus       156 Rpt~~~il~~  165 (200)
                      |||+.++++.
T Consensus       319 Rpt~~ell~h  328 (353)
T PLN00034        319 RWSAMQLLQH  328 (353)
T ss_pred             CcCHHHHhcC
Confidence            9999999874


No 93 
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95  E-value=5.6e-28  Score=190.53  Aligned_cols=154  Identities=25%  Similarity=0.405  Sum_probs=114.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       245 qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  321 (400)
T cd05105         245 QVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSD  321 (400)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhh
Confidence            5789999999   8999999999999999999999999999987654322222222233567899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||........ ....+.             ....+.........+.+++.+||+.||++|||+
T Consensus       322 iwSlGvil~ellt~g~~P~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~  387 (400)
T cd05105         322 VWSYGILLWEIFSLGGTPYPGMIVDST-FYNKIK-------------SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSF  387 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCCcccchhHH-HHHHHh-------------cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence            9999999999997 8889865322111 111000             000011112233468889999999999999999


Q ss_pred             HHHHHHHHhhCC
Q 047677          160 RSVVQMLEEAEP  171 (200)
Q Consensus       160 ~~il~~L~~~~~  171 (200)
                      .++.+.|+.+.+
T Consensus       388 ~~l~~~l~~l~~  399 (400)
T cd05105         388 LHLSDIVESLLP  399 (400)
T ss_pred             HHHHHHHHHHcC
Confidence            999999998764


No 94 
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95  E-value=3.4e-28  Score=183.29  Aligned_cols=149  Identities=27%  Similarity=0.388  Sum_probs=107.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC---CeeecccccceeeccCCCcceeeeecccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL---KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~   77 (200)
                      |++.||+|||   ++|++|+||||+||+++.++   .++|+|||++.................+..|++||++.+..++.
T Consensus       124 qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (277)
T cd05036         124 DVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS  200 (277)
T ss_pred             HHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCc
Confidence            5789999999   88999999999999997654   58999999987653221111111112345799999998888999


Q ss_pred             ccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ++|+|||||++|++++ |..||......  .....+.    ...      ....   +......+.+++.+||+.+|++|
T Consensus       201 ~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~----~~~------~~~~---~~~~~~~~~~~i~~cl~~~p~~R  265 (277)
T cd05036         201 KTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVT----GGG------RLDP---PKGCPGPVYRIMTDCWQHTPEDR  265 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH----cCC------cCCC---CCCCCHHHHHHHHHHcCCCcccC
Confidence            9999999999999997 88898643221  1111111    000      0111   11223467889999999999999


Q ss_pred             CCHHHHHHHHH
Q 047677          157 PTMRSVVQMLE  167 (200)
Q Consensus       157 pt~~~il~~L~  167 (200)
                      ||+.++++.|+
T Consensus       266 ps~~~vl~~l~  276 (277)
T cd05036         266 PNFATILERIQ  276 (277)
T ss_pred             cCHHHHHHHhh
Confidence            99999999886


No 95 
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95  E-value=4.2e-28  Score=184.27  Aligned_cols=156  Identities=25%  Similarity=0.355  Sum_probs=110.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||.+................++..|++||...+..++.++|
T Consensus       138 ~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (296)
T cd05051         138 QIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSD  214 (296)
T ss_pred             HHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccch
Confidence            5789999999   8999999999999999999999999999987654332222222233567899999988888899999


Q ss_pred             hhhHhHHHHHHHh--CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT--GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|||||++|++++  +..||.....  ................      .............+.+++.+||+.||.+|||
T Consensus       215 v~slG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt  286 (296)
T cd05051         215 VWAFGVTLWEILTLCREQPYEHLTD--QQVIENAGHFFRDDGR------QIYLPRPPNCPKDIYELMLECWRRDEEDRPT  286 (296)
T ss_pred             hhhhHHHHHHHHhcCCCCCCCCcCh--HHHHHHHHhccccccc------cccCCCccCCCHHHHHHHHHHhccChhcCCC
Confidence            9999999999998  5677754321  1111111111000000      0000111122347889999999999999999


Q ss_pred             HHHHHHHHH
Q 047677          159 MRSVVQMLE  167 (200)
Q Consensus       159 ~~~il~~L~  167 (200)
                      +.++++.|+
T Consensus       287 ~~el~~~L~  295 (296)
T cd05051         287 FREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhc
Confidence            999999886


No 96 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=1.9e-28  Score=188.64  Aligned_cols=143  Identities=28%  Similarity=0.431  Sum_probs=107.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       103 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05595         103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccccccCCcCcCCcccccCCCCCchhc
Confidence            6889999999   89999999999999999999999999998865322211  112234789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||......  .....+.   .        ....++.   .....+.+++.+||..||.+|+   
T Consensus       178 iwSlGvil~ell~g~~Pf~~~~~~--~~~~~~~---~--------~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~  241 (323)
T cd05595         178 WWGLGVVMYEMMCGRLPFYNQDHE--RLFELIL---M--------EEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGG  241 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHh---c--------CCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCC
Confidence            999999999999999999643221  1111000   0        0111222   2234677899999999999998   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.++++
T Consensus       242 ~~~~~~~l~  250 (323)
T cd05595         242 PSDAKEVME  250 (323)
T ss_pred             CCCHHHHHc
Confidence              7888765


No 97 
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95  E-value=5e-28  Score=188.50  Aligned_cols=158  Identities=25%  Similarity=0.240  Sum_probs=110.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++.......   ......++..|+|||++.+..++.++|
T Consensus       127 qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~D  200 (355)
T cd07874         127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVD  200 (355)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987543321   111234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc------------------ccchhh-----hhcc-CCC---CCc
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN------------------SKQSVL-----TLVD-SSI---PET  133 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------------~~~~~~-----~~~~-~~~---~~~  133 (200)
                      +|||||++|++++|..||....... ...........                  ......     .... ...   ...
T Consensus       201 iwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (355)
T cd07874         201 IWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH  279 (355)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccc
Confidence            9999999999999999997543111 11100000000                  000000     0000 000   001


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .......+.+++.+||..||.+|||+.++++.
T Consensus       280 ~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         280 NKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             ccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            11223467889999999999999999999874


No 98 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95  E-value=4.6e-28  Score=181.57  Aligned_cols=150  Identities=23%  Similarity=0.333  Sum_probs=109.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++++|||........... ......++..|+|||...+..++.++|
T Consensus       115 ~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  190 (266)
T cd05064         115 GLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASD  190 (266)
T ss_pred             HHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhH
Confidence            5789999999   899999999999999999999999999976543221111 111122456799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .....+.             .......+......+.+++.+||+.+|.+|||+
T Consensus       191 i~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~  255 (266)
T cd05064         191 VWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVE-------------DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRF  255 (266)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHH-------------CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCH
Confidence            9999999999875 99998644221  1111110             000011122233467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       256 ~~i~~~l~~~  265 (266)
T cd05064         256 SQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHhh
Confidence            9999999865


No 99 
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95  E-value=8e-28  Score=180.32  Aligned_cols=150  Identities=28%  Similarity=0.421  Sum_probs=110.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-----CeeecccccceeeccCCCcceeeeecccccccccccccCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-----KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~   75 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++     .++++|||++................++..|++||.+.+..+
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (269)
T cd05044         114 DVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF  190 (269)
T ss_pred             HHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCc
Confidence            5788999999   88999999999999998877     899999999865543221111112234678999999988889


Q ss_pred             CCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      +.++|+||||+++|++++ |..||.....  ......+.             ..............+.+++.+||..+|.
T Consensus       191 ~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~  255 (269)
T cd05044         191 TTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVT-------------AGGRLQKPENCPDKIYQLMTNCWAQDPS  255 (269)
T ss_pred             ccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHh-------------cCCccCCcccchHHHHHHHHHHcCCCcc
Confidence            999999999999999998 9999864321  11111110             0000111122335678899999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 047677          155 LRPTMRSVVQMLEE  168 (200)
Q Consensus       155 ~Rpt~~~il~~L~~  168 (200)
                      +||++.++++.|++
T Consensus       256 ~Rp~~~~i~~~l~~  269 (269)
T cd05044         256 ERPTFDRIQEILQN  269 (269)
T ss_pred             cCCCHHHHHHHHhC
Confidence            99999999998863


No 100
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95  E-value=4.2e-28  Score=183.69  Aligned_cols=150  Identities=29%  Similarity=0.490  Sum_probs=109.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||.+.................+..|++||...+..++.++|
T Consensus       138 ~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (288)
T cd05050         138 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESD  214 (288)
T ss_pred             HHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhH
Confidence            5789999999   8999999999999999999999999999986543322111111122356799999988888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  .....+             ...............+.+++.+||+.||.+|||+
T Consensus       215 v~slG~il~el~~~~~~p~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  279 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYYGMAHE--EVIYYV-------------RDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSF  279 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-------------hcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            9999999999997 77888543211  111111             0111111111233578889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       280 ~el~~~l~~  288 (288)
T cd05050         280 ASINRILQR  288 (288)
T ss_pred             HHHHHHhhC
Confidence            999999874


No 101
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=4e-28  Score=185.46  Aligned_cols=155  Identities=28%  Similarity=0.401  Sum_probs=112.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||.+................++..|++||...+..++.++|
T Consensus       148 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         148 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             HHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            5789999999   8999999999999999999999999999986554221111111112346799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||....  .........    .         .............+.+++.+||..+|.+|||+
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~--~~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  289 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVP--VEELFKLLK----E---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF  289 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHH----c---------CCCCCCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence            9999999999998 778885322  111111110    0         00111112233477789999999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|+.+....
T Consensus       290 ~evl~~l~~~~~~~  303 (307)
T cd05098         290 KQLVEDLDRILALT  303 (307)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999876553


No 102
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95  E-value=8.4e-28  Score=179.53  Aligned_cols=149  Identities=31%  Similarity=0.478  Sum_probs=111.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+........ .......++..|++||...+..++.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  185 (260)
T cd05069         110 QIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHH
Confidence            5789999999   89999999999999999999999999999876543221 1111123456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........    .         ...+.........+.+++.+||+.||.+||++
T Consensus       186 i~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         186 VWSFGILLTELVTKGRVPYPGMVN--REVLEQVE----R---------GYRMPCPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH----c---------CCCCCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence            9999999999999 8889864321  11111111    0         00011112234568889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      +++++.|++
T Consensus       251 ~~i~~~l~~  259 (260)
T cd05069         251 EYIQSFLED  259 (260)
T ss_pred             HHHHHHHhc
Confidence            999999875


No 103
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95  E-value=4.6e-28  Score=180.50  Aligned_cols=148  Identities=27%  Similarity=0.420  Sum_probs=108.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++++|||.+......... ......++..|+|||.+.+..++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd05114         108 DVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhh
Confidence            5789999999   899999999999999999999999999988654322111 111122456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.             ....+..+......+.+++.+||+.+|.+|||+
T Consensus       184 i~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~-------------~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~  248 (256)
T cd05114         184 VWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMIS-------------RGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTF  248 (256)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-------------CCCCCCCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            9999999999999 8889864321  11111111             000111111223467889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|.
T Consensus       249 ~~l~~~l~  256 (256)
T cd05114         249 AELLRAIT  256 (256)
T ss_pred             HHHHHhhC
Confidence            99998873


No 104
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95  E-value=5.5e-28  Score=180.45  Aligned_cols=149  Identities=29%  Similarity=0.450  Sum_probs=110.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||+|+||+++.++.++|+|||.+..........  ....++..|++||......++.++|
T Consensus       112 ~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~D  186 (261)
T cd05148         112 QVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS--SDKKIPYKWTAPEAASHGTFSTKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc--cCCCCceEecCHHHHccCCCCchhh
Confidence            5789999999   8999999999999999999999999999986653321111  1223456799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.             ....+.........+.+++.+||..||.+|||+
T Consensus       187 iwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (261)
T cd05148         187 VWSFGILLYEMFTYGQVPYPGMNN--HEVYDQIT-------------AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSF  251 (261)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHH-------------hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            9999999999998 8899864321  11111111             000011112233467889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+.+
T Consensus       252 ~~l~~~L~~~  261 (261)
T cd05148         252 KALREELDNI  261 (261)
T ss_pred             HHHHHHHhcC
Confidence            9999999863


No 105
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95  E-value=5.5e-28  Score=181.58  Aligned_cols=151  Identities=25%  Similarity=0.396  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++++|||.+................++..|++||......++.++|
T Consensus       121 ~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sD  197 (273)
T cd05074         121 DIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhh
Confidence            5789999999   8999999999999999999999999999987654322111111122456799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||.....  ......+.   . ..      ....   .......+.+++.+||+.+|++|||+
T Consensus       198 i~slG~il~el~~~g~~p~~~~~~--~~~~~~~~---~-~~------~~~~---~~~~~~~~~~l~~~~l~~~p~~Rps~  262 (273)
T cd05074         198 VWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLI---K-GN------RLKQ---PPDCLEDVYELMCQCWSPEPKCRPSF  262 (273)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHH---c-CC------cCCC---CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999999 7888864321  11111111   0 00      0011   11223478889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      .++++.|+++
T Consensus       263 ~~~~~~l~~~  272 (273)
T cd05074         263 QHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHhh
Confidence            9999999875


No 106
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95  E-value=3.8e-28  Score=193.83  Aligned_cols=157  Identities=19%  Similarity=0.319  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-CeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~   78 (200)
                      |++.||+|||   ++||+||||||+||+++.++ .++|+|||++........   .....+++.|+|||++.+. .++.+
T Consensus       178 qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~  251 (440)
T PTZ00036        178 QLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTH  251 (440)
T ss_pred             HHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcH
Confidence            6889999999   89999999999999998654 699999999976543221   1123478899999987664 58899


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC-----CCCC----ch-----HHHHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS-----SIPE----TF-----KENAVEILRI  144 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~-----~~~~~~~~~l  144 (200)
                      +|+|||||++|+|++|..||....... .+...+...............+     .++.    ..     .....++.+|
T Consensus       252 ~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l  330 (440)
T PTZ00036        252 IDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINF  330 (440)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHH
Confidence            999999999999999999997543221 1111111000000000000000     0010    00     1123468889


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||..||.+|||+.++++
T Consensus       331 i~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        331 ISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHCCCChhHCcCHHHHhC
Confidence            99999999999999999884


No 107
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95  E-value=5.7e-28  Score=181.43  Aligned_cols=149  Identities=27%  Similarity=0.360  Sum_probs=108.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++++|||++......   ........+..|++||+.....++.++|
T Consensus       120 ~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~D  193 (270)
T cd05047         120 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSD  193 (270)
T ss_pred             HHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhh
Confidence            5788999999   899999999999999999999999999987432211   0011111245699999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .....+    ..         .............+.+++.+||..+|.+|||+
T Consensus       194 i~slG~il~el~~~g~~pf~~~~~~--~~~~~~----~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  258 (270)
T cd05047         194 VWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL----PQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSF  258 (270)
T ss_pred             HHHHHHHHHHHHcCCCCCccccCHH--HHHHHH----hC---------CCCCCCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence            9999999999997 99998643211  111100    00         00001111223467889999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      .+++..|+.+.
T Consensus       259 ~~il~~l~~~~  269 (270)
T cd05047         259 AQILVSLNRML  269 (270)
T ss_pred             HHHHHHHHHhh
Confidence            99999998764


No 108
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.95  E-value=4.8e-28  Score=183.29  Aligned_cols=157  Identities=24%  Similarity=0.251  Sum_probs=108.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||+||+++.++.++|+|||++........   .....++..|+|||++.+..++.++|
T Consensus       116 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (288)
T cd07863         116 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVD  189 (288)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCccc---CCCccccccccCchHhhCCCCCCcch
Confidence            6889999999   89999999999999999999999999999876543211   11234688899999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-ccchhhh-------hccCCCCC----chHHHHHHHHHHHHHh
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-SKQSVLT-------LVDSSIPE----TFKENAVEILRIAVLC  148 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~----~~~~~~~~~~~li~~c  148 (200)
                      +||+||++|++++|..||......+ ........... .......       ......+.    ........+.+++.+|
T Consensus       190 iwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  268 (288)
T cd07863         190 MWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM  268 (288)
T ss_pred             hhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence            9999999999999999986433221 11111100000 0000000       00000000    0112234577899999


Q ss_pred             cCCCCCCCCCHHHHHH
Q 047677          149 TTTQPALRPTMRSVVQ  164 (200)
Q Consensus       149 l~~dp~~Rpt~~~il~  164 (200)
                      |+.||.+|||+.+++.
T Consensus       269 L~~dP~~R~t~~~~l~  284 (288)
T cd07863         269 LTFNPHKRISAFRALQ  284 (288)
T ss_pred             hccCcccCCCHHHHhc
Confidence            9999999999999874


No 109
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.95  E-value=6.7e-28  Score=183.25  Aligned_cols=156  Identities=22%  Similarity=0.329  Sum_probs=110.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|+|||......++.++|
T Consensus       137 ~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  213 (295)
T cd05097         137 QIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASD  213 (295)
T ss_pred             HHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhh
Confidence            5789999999   8999999999999999999999999999986554322111111223466899999988888999999


Q ss_pred             hhhHhHHHHHHHh--CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT--GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +||||+++|++++  +..||.....  ................      .............+.+++.+||..||++|||
T Consensus       214 vwSlG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs  285 (295)
T cd05097         214 VWAFGVTLWEMFTLCKEQPYSLLSD--EQVIENTGEFFRNQGR------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT  285 (295)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccCh--HHHHHHHHHhhhhccc------cccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            9999999999998  5567764322  1111111111110000      0001111112347889999999999999999


Q ss_pred             HHHHHHHHH
Q 047677          159 MRSVVQMLE  167 (200)
Q Consensus       159 ~~~il~~L~  167 (200)
                      +.++++.|.
T Consensus       286 ~~~i~~~l~  294 (295)
T cd05097         286 FNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHh
Confidence            999999886


No 110
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=4.3e-28  Score=186.80  Aligned_cols=161  Identities=30%  Similarity=0.350  Sum_probs=115.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|+|   ++|++|||||.+||||+.+|++||+|||+++++....... .+..+-|..|.|||.+.+. .|+...
T Consensus       226 QLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aV  301 (560)
T KOG0600|consen  226 QLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAV  301 (560)
T ss_pred             HHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccce
Confidence            7899999999   8999999999999999999999999999999776544322 2223358899999998875 599999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhh-----cccchhh--hhccC--CC----CCchHHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHF-----NSKQSVL--TLVDS--SI----PETFKENAVEILRIAV  146 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~--~~----~~~~~~~~~~~~~li~  146 (200)
                      |+||.|||+.||+.|++.|.....-..-..-+-....     +....+.  ....+  .+    .+.+.......++|+.
T Consensus       302 DlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~  381 (560)
T KOG0600|consen  302 DLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLE  381 (560)
T ss_pred             eehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHH
Confidence            9999999999999999999865433222111111000     0000000  11111  11    1112333445788999


Q ss_pred             HhcCCCCCCCCCHHHHHHH
Q 047677          147 LCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       147 ~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+|..||.+|.|+.+++..
T Consensus       382 ~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  382 KLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             HHhccCccccccHHHHhcC
Confidence            9999999999999998865


No 111
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=7.8e-28  Score=185.95  Aligned_cols=155  Identities=30%  Similarity=0.414  Sum_probs=113.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||.+.+..++.++|
T Consensus       142 qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         142 QVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            5789999999   8999999999999999999999999999987654321111111112345799999998888999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ......+.             ..............+.+++.+||+.+|.+|||+
T Consensus       219 i~slG~il~el~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIPV--EELFKLLK-------------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTF  283 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence            9999999999998 7888864321  11111110             001111112223467889999999999999999


Q ss_pred             HHHHHHHHhhCCCC
Q 047677          160 RSVVQMLEEAEPCN  173 (200)
Q Consensus       160 ~~il~~L~~~~~~~  173 (200)
                      .++++.|++.....
T Consensus       284 ~ell~~l~~~~~~~  297 (334)
T cd05100         284 KQLVEDLDRVLTVT  297 (334)
T ss_pred             HHHHHHHHHHhhhc
Confidence            99999999887444


No 112
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95  E-value=1.1e-28  Score=190.14  Aligned_cols=144  Identities=26%  Similarity=0.417  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   + +|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++
T Consensus       103 qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (325)
T cd05594         103 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAV  177 (325)
T ss_pred             HHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCcc
Confidence            6889999999   5 7999999999999999999999999999865432211  11223588999999999888899999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC--
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP--  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  157 (200)
                      |+|||||++|++++|..||......  .....+.   .        ....++..   ....+.+++.+||+.||++|+  
T Consensus       178 DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~---~--------~~~~~p~~---~~~~~~~li~~~L~~dP~~R~~~  241 (325)
T cd05594         178 DWWGLGVVMYEMMCGRLPFYNQDHE--KLFELIL---M--------EEIRFPRT---LSPEAKSLLSGLLKKDPKQRLGG  241 (325)
T ss_pred             ccccccceeeeeccCCCCCCCCCHH--HHHHHHh---c--------CCCCCCCC---CCHHHHHHHHHHhhcCHHHhCCC
Confidence            9999999999999999999643211  1111110   0        01112222   234677889999999999997  


Q ss_pred             ---CHHHHHHH
Q 047677          158 ---TMRSVVQM  165 (200)
Q Consensus       158 ---t~~~il~~  165 (200)
                         ++.++++.
T Consensus       242 ~~~~~~~il~h  252 (325)
T cd05594         242 GPDDAKEIMQH  252 (325)
T ss_pred             CCCCHHHHhcC
Confidence               88888753


No 113
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95  E-value=8.8e-28  Score=186.33  Aligned_cols=155  Identities=30%  Similarity=0.429  Sum_probs=113.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++................++..|++||...+..++.++|
T Consensus       187 qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  263 (343)
T cd05103         187 QVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  263 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhh
Confidence            5789999999   8999999999999999999999999999987653322111111222456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||....... .......    ..      .....+.   .....+.+++..||+.||++|||+
T Consensus       264 i~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~----~~------~~~~~~~---~~~~~~~~~~~~cl~~~p~~Rps~  329 (343)
T cd05103         264 VWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLK----EG------TRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTF  329 (343)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHh----cc------CCCCCCC---CCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999997 888986532221 1111000    00      0011111   123468889999999999999999


Q ss_pred             HHHHHHHHhhCCC
Q 047677          160 RSVVQMLEEAEPC  172 (200)
Q Consensus       160 ~~il~~L~~~~~~  172 (200)
                      .++++.|+.+.+.
T Consensus       330 ~eil~~l~~~~~~  342 (343)
T cd05103         330 SELVEHLGNLLQA  342 (343)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999987653


No 114
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95  E-value=2.3e-28  Score=188.77  Aligned_cols=148  Identities=26%  Similarity=0.310  Sum_probs=106.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++......... ......|+..|+|||++.+. .++.++
T Consensus       113 qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  188 (332)
T cd05614         113 EIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAV  188 (332)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCcc
Confidence            6889999999   899999999999999999999999999998754332211 12224588999999998765 367889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC--
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP--  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  157 (200)
                      |+|||||++|++++|..||......... .......        ......++.   .....+.+++.+||+.||++||  
T Consensus       189 DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~~~--------~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~  256 (332)
T cd05614         189 DWWSLGILIFELLTGASPFTLEGERNTQ-SEVSRRI--------LKCDPPFPS---FIGPEAQDLLHKLLRKDPKKRLGA  256 (332)
T ss_pred             ccccchhhhhhhhcCCCCCCCCCCCCCH-HHHHHHH--------hcCCCCCCC---CCCHHHHHHHHHHcCCCHHHcCCC
Confidence            9999999999999999999643322111 0000000        001112222   2234677889999999999999  


Q ss_pred             ---CHHHHHH
Q 047677          158 ---TMRSVVQ  164 (200)
Q Consensus       158 ---t~~~il~  164 (200)
                         +++++++
T Consensus       257 ~~~~~~~~l~  266 (332)
T cd05614         257 GPQGASEIKE  266 (332)
T ss_pred             CCCCHHHHHc
Confidence               6767764


No 115
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95  E-value=2e-28  Score=188.27  Aligned_cols=144  Identities=30%  Similarity=0.404  Sum_probs=107.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.........  .....|+..|+|||++.+..++.++|
T Consensus       104 qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05591         104 EVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--TTTFCGTPDYIAPEILQELEYGPSVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc--ccccccCccccCHHHHcCCCCCCccc
Confidence            5889999999   899999999999999999999999999998654322211  12234789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||.....  ......+.   ..        ....+..   ....+.+++.+||+.||.+||   
T Consensus       179 vwslG~il~el~tg~~Pf~~~~~--~~~~~~i~---~~--------~~~~p~~---~~~~~~~ll~~~L~~dp~~R~~~~  242 (321)
T cd05591         179 WWALGVLMYEMMAGQPPFEADNE--DDLFESIL---HD--------DVLYPVW---LSKEAVSILKAFMTKNPNKRLGCV  242 (321)
T ss_pred             eechhHHHHHHhcCCCCCCCCCH--HHHHHHHH---cC--------CCCCCCC---CCHHHHHHHHHHhccCHHHcCCCC
Confidence            99999999999999999974421  11111111   00        0111111   234677899999999999999   


Q ss_pred             ----CHHHHHHH
Q 047677          158 ----TMRSVVQM  165 (200)
Q Consensus       158 ----t~~~il~~  165 (200)
                          ++.++++.
T Consensus       243 ~~~~~~~~~~~h  254 (321)
T cd05591         243 ASQGGEDAIKQH  254 (321)
T ss_pred             CCCCCHHHHhcC
Confidence                77777643


No 116
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95  E-value=7.9e-28  Score=179.62  Aligned_cols=149  Identities=31%  Similarity=0.487  Sum_probs=110.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+......... ......++..|+|||...+..++.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  185 (260)
T cd05070         110 QVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhh
Confidence            5789999999   889999999999999999999999999998765432211 111122456799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........             .....+........+.+++.+||..+|++|||+
T Consensus       186 i~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         186 VWSFGILLTELVTKGRVPYPGMNN--REVLEQVE-------------RGYRMPCPQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH-------------cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCH
Confidence            9999999999999 8888864321  11111110             000111122234568889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++.+.|++
T Consensus       251 ~~l~~~l~~  259 (260)
T cd05070         251 EYLQSFLED  259 (260)
T ss_pred             HHHHHHHhc
Confidence            999999875


No 117
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95  E-value=2.9e-28  Score=187.20  Aligned_cols=143  Identities=29%  Similarity=0.404  Sum_probs=107.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++.........  .....++..|+|||++.+..++.++|
T Consensus       104 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~D  178 (318)
T cd05570         104 EIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAPEILSYQPYGPAVD  178 (318)
T ss_pred             HHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc--ccceecCccccCHHHhcCCCCCcchh
Confidence            5889999999   899999999999999999999999999988653222111  12234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH-
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM-  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-  159 (200)
                      +|||||++|++++|..||.....  ......+.   .        .....+.   .....+.+++.+||+.||.+|||+ 
T Consensus       179 iwslGvil~~l~~G~~pf~~~~~--~~~~~~i~---~--------~~~~~~~---~~~~~~~~li~~~l~~dP~~R~s~~  242 (318)
T cd05570         179 WWALGVLLYEMLAGQSPFEGDDE--DELFQSIL---E--------DEVRYPR---WLSKEAKSILKSFLTKNPEKRLGCL  242 (318)
T ss_pred             hhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHH---c--------CCCCCCC---cCCHHHHHHHHHHccCCHHHcCCCC
Confidence            99999999999999999964321  11111110   0        0111111   223467889999999999999999 


Q ss_pred             ----HHHHH
Q 047677          160 ----RSVVQ  164 (200)
Q Consensus       160 ----~~il~  164 (200)
                          .++++
T Consensus       243 ~~~~~~ll~  251 (318)
T cd05570         243 PTGEQDIKG  251 (318)
T ss_pred             CCCHHHHhc
Confidence                77754


No 118
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.95  E-value=6.4e-28  Score=179.86  Aligned_cols=148  Identities=27%  Similarity=0.396  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   +.|++|+||||.||+++.++.++|+|||.+........ .......++..|++||...+..++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~D  183 (256)
T cd05113         108 DVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhH
Confidence            5889999999   89999999999999999999999999998875543211 1111122456799999998888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .....+.             ..............+.+++.+||+.+|.+|||+
T Consensus       184 i~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  248 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVS-------------QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTF  248 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            9999999999998 88998643321  1111110             000011111123578889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|+
T Consensus       249 ~~ll~~~~  256 (256)
T cd05113         249 QQLLSSIE  256 (256)
T ss_pred             HHHHHhhC
Confidence            99998764


No 119
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95  E-value=3.3e-28  Score=187.28  Aligned_cols=143  Identities=27%  Similarity=0.405  Sum_probs=107.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.........  .....|+..|+|||++.+..++.++|
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  182 (323)
T cd05584         108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV--THTFCGTIEYMAPEILMRSGHGKAVD  182 (323)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc--ccccCCCccccChhhccCCCCCCcce
Confidence            5889999999   899999999999999999999999999998654322211  12234789999999998888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||......  .....+   ...        ....+..   ....+.+++.+||+.||.+||   
T Consensus       183 iwslG~il~ell~G~~pf~~~~~~--~~~~~~---~~~--------~~~~~~~---~~~~~~~li~~~l~~~p~~R~~~~  246 (323)
T cd05584         183 WWSLGALMYDMLTGAPPFTAENRK--KTIDKI---LKG--------KLNLPPY---LTPEARDLLKKLLKRNPSSRLGAG  246 (323)
T ss_pred             ecccHHHHHHHhcCCCCCCCCCHH--HHHHHH---HcC--------CCCCCCC---CCHHHHHHHHHHcccCHhHcCCCC
Confidence            999999999999999999743211  111100   000        1112222   234677899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.++++
T Consensus       247 ~~~~~~l~~  255 (323)
T cd05584         247 PGDAAEVQS  255 (323)
T ss_pred             CCCHHHHhc
Confidence              7887765


No 120
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.95  E-value=3.8e-28  Score=186.41  Aligned_cols=142  Identities=29%  Similarity=0.437  Sum_probs=106.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05619         104 EIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVD  178 (316)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhh
Confidence            6889999999   89999999999999999999999999999865322211  122345789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||.....  ......+.           .....++..   ....+.+++.+||+.||.+||++.
T Consensus       179 vwslG~il~el~~G~~pf~~~~~--~~~~~~i~-----------~~~~~~~~~---~~~~~~~li~~~l~~~P~~R~~~~  242 (316)
T cd05619         179 WWSFGVLLYEMLIGQSPFHGHDE--EELFQSIR-----------MDNPCYPRW---LTREAKDILVKLFVREPERRLGVK  242 (316)
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH-----------hCCCCCCcc---CCHHHHHHHHHHhccCHhhcCCCh
Confidence            99999999999999999975321  11111110           011112221   234677889999999999999997


Q ss_pred             -HHH
Q 047677          161 -SVV  163 (200)
Q Consensus       161 -~il  163 (200)
                       ++.
T Consensus       243 ~~l~  246 (316)
T cd05619         243 GDIR  246 (316)
T ss_pred             HHHH
Confidence             553


No 121
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95  E-value=9.1e-28  Score=182.60  Aligned_cols=157  Identities=22%  Similarity=0.316  Sum_probs=109.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++.................+..|++||...+..++.++|
T Consensus       138 ~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  214 (296)
T cd05095         138 QIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASD  214 (296)
T ss_pred             HHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhh
Confidence            5789999999   8999999999999999999999999999987553322111111122356799999888888899999


Q ss_pred             hhhHhHHHHHHHh--CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT--GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|||||++|++++  |..||.....  ................      ....+........+.+++.+||+.||.+|||
T Consensus       215 iwSlG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  286 (296)
T cd05095         215 VWAFGVTLWEILTLCKEQPYSQLSD--EQVIENTGEFFRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPS  286 (296)
T ss_pred             hhHHHHHHHHHHHhCCCCCccccCh--HHHHHHHHHHHhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence            9999999999998  6678754322  1111111111100000      0000111112357888999999999999999


Q ss_pred             HHHHHHHHHh
Q 047677          159 MRSVVQMLEE  168 (200)
Q Consensus       159 ~~~il~~L~~  168 (200)
                      +.++++.|++
T Consensus       287 ~~~i~~~l~~  296 (296)
T cd05095         287 FQEIHATLLE  296 (296)
T ss_pred             HHHHHHHHhC
Confidence            9999998863


No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95  E-value=5.5e-28  Score=182.22  Aligned_cols=150  Identities=24%  Similarity=0.305  Sum_probs=109.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......   ......++..|+|||++.+..++.++|
T Consensus       103 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  176 (277)
T cd05607         103 QITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVD  176 (277)
T ss_pred             HHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchh
Confidence            5789999999   8999999999999999999999999999987654321   122234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||........ ......          .......+.........+.+++.+||+.||.+||++.
T Consensus       177 vwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~  245 (277)
T cd05607         177 WFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKR----------RTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSR  245 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHH----------HhhccccccccccCCHHHHHHHHHHhccCHhhCCCCc
Confidence            99999999999999999965332111 001100          0001111111112334678899999999999999998


Q ss_pred             HHHHHHH
Q 047677          161 SVVQMLE  167 (200)
Q Consensus       161 ~il~~L~  167 (200)
                      ++++.+.
T Consensus       246 ~~~~~~~  252 (277)
T cd05607         246 EKNDDPR  252 (277)
T ss_pred             cchhhhh
Confidence            7664433


No 123
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95  E-value=8.9e-28  Score=179.22  Aligned_cols=151  Identities=23%  Similarity=0.375  Sum_probs=110.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceee-eecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTH-VIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~-~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++............. ...++..|++||.+....++.++
T Consensus       103 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05115         103 QVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRS  179 (257)
T ss_pred             HHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchh
Confidence            5789999999   7999999999999999999999999999987554322111111 11124679999998877888999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|||||++|++++ |..||.....  ......+.             ....+..+......+.+++.+||..+|++||+
T Consensus       180 Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~  244 (257)
T cd05115         180 DVWSYGITMWEAFSYGQKPYKKMKG--PEVMSFIE-------------QGKRLDCPAECPPEMYALMKDCWIYKWEDRPN  244 (257)
T ss_pred             hHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHH-------------CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            99999999999996 9999875422  11111111             00111111223457788999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++.+.|+..
T Consensus       245 ~~~i~~~l~~~  255 (257)
T cd05115         245 FAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHHhhh
Confidence            99999998764


No 124
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.95  E-value=4.3e-28  Score=186.69  Aligned_cols=143  Identities=27%  Similarity=0.412  Sum_probs=106.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05589         109 CVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVD  183 (324)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC--cccccccCccccCHhHhcCCCCCcccc
Confidence            5789999999   89999999999999999999999999998864322211  112245789999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||......  .....+.   .        .....+..   ....+.+++.+||+.||.+||   
T Consensus       184 iwslG~il~el~~G~~pf~~~~~~--~~~~~i~---~--------~~~~~p~~---~~~~~~~li~~~L~~dP~~R~~~~  247 (324)
T cd05589         184 WWGLGVLIYEMLVGESPFPGDDEE--EVFDSIV---N--------DEVRYPRF---LSREAISIMRRLLRRNPERRLGSG  247 (324)
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---h--------CCCCCCCC---CCHHHHHHHHHHhhcCHhHcCCCC
Confidence            999999999999999999643211  1111100   0        01112222   234677899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.++++
T Consensus       248 ~~~~~~l~~  256 (324)
T cd05589         248 EKDAEDVKK  256 (324)
T ss_pred             CCCHHHHhh
Confidence              5666654


No 125
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95  E-value=6.1e-28  Score=188.59  Aligned_cols=158  Identities=22%  Similarity=0.218  Sum_probs=110.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.......   ......++..|+|||++.+..++.++|
T Consensus       134 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~D  207 (364)
T cd07875         134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVD  207 (364)
T ss_pred             HHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654321   111234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhh------------------cccchh-----hhhc----cCCCCCc
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHF------------------NSKQSV-----LTLV----DSSIPET  133 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------------~~~~~~-----~~~~----~~~~~~~  133 (200)
                      +|||||++|++++|..||....... ..........                  ......     ....    .+.....
T Consensus       208 iwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (364)
T cd07875         208 IWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH  286 (364)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccc
Confidence            9999999999999999996543211 1111000000                  000000     0000    0000001


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .......+.+++.+||+.||.+|||+.++++.
T Consensus       287 ~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         287 NKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             cccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            11123467889999999999999999999874


No 126
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95  E-value=1.5e-27  Score=179.86  Aligned_cols=156  Identities=24%  Similarity=0.358  Sum_probs=114.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+................++..|++||.+....++.++|
T Consensus       117 qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05057         117 QIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSD  193 (279)
T ss_pred             HHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhh
Confidence            6889999999   8999999999999999999999999999987654321111111111346799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  .+....+.             .......+......+.+++.+||..||.+|||+
T Consensus       194 i~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~  258 (279)
T cd05057         194 VWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLE-------------KGERLPQPPICTIDVYMVLVKCWMIDAESRPTF  258 (279)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHh-------------CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            9999999999998 9999865421  11111111             000001111122367788999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      .++++.|+++.....
T Consensus       259 ~~l~~~l~~~~~~~~  273 (279)
T cd05057         259 KELINEFSKMARDPQ  273 (279)
T ss_pred             HHHHHHHHHHHhCCc
Confidence            999999999866544


No 127
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.95  E-value=1.9e-28  Score=191.64  Aligned_cols=151  Identities=31%  Similarity=0.469  Sum_probs=118.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      +|+.|+.|||   .+.|||||||.-||||+.+..+|++|||.++.....   .+...+.||..|+|||+++....+.|+|
T Consensus       220 ~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVD  293 (904)
T KOG4721|consen  220 GIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVD  293 (904)
T ss_pred             HhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccc
Confidence            5899999999   899999999999999999999999999998765432   3444567999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      |||||+++|||+||..||......     ..++      +.....+.   .+.+....+.|.-|+.+||+-.|..||+++
T Consensus       294 IwSfGVVLWEmLT~EiPYkdVdss-----AIIw------GVGsNsL~---LpvPstcP~GfklL~Kqcw~sKpRNRPSFr  359 (904)
T KOG4721|consen  294 IWSFGVVLWEMLTGEIPYKDVDSS-----AIIW------GVGSNSLH---LPVPSTCPDGFKLLLKQCWNSKPRNRPSFR  359 (904)
T ss_pred             eehhHHHHHHHHhcCCCccccchh-----eeEE------eccCCccc---ccCcccCchHHHHHHHHHHhcCCCCCccHH
Confidence            999999999999999999754221     1111      11111111   122334445677788899999999999999


Q ss_pred             HHHHHHHhhCC
Q 047677          161 SVVQMLEEAEP  171 (200)
Q Consensus       161 ~il~~L~~~~~  171 (200)
                      +|+..|+-+.+
T Consensus       360 qil~HldIa~p  370 (904)
T KOG4721|consen  360 QILLHLDIASP  370 (904)
T ss_pred             HHHHHHhhcCH
Confidence            99999976654


No 128
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95  E-value=4.3e-28  Score=186.68  Aligned_cols=138  Identities=32%  Similarity=0.466  Sum_probs=104.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05587         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVD  183 (324)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccc
Confidence            6889999999   89999999999999999999999999999864322211  222345889999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+||++|++++|..||.....  ......+.   .        ....++..   ....+.+++.+||+.||.+|++.
T Consensus       184 iwslGvil~elltG~~pf~~~~~--~~~~~~i~---~--------~~~~~~~~---~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         184 WWAFGVLLYEMLAGQPPFDGEDE--DELFQSIM---E--------HNVSYPKS---LSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH---c--------CCCCCCCC---CCHHHHHHHHHHhhcCHHHcCCC
Confidence            99999999999999999974321  11111111   0        01112222   23467789999999999999976


No 129
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95  E-value=1.4e-27  Score=177.69  Aligned_cols=145  Identities=29%  Similarity=0.504  Sum_probs=110.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||+|+||+++.++.++|+|||++..........  ....++..|++||+..+..++.++|
T Consensus       109 ~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd08529         109 QILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA--NTIVGTPYYLSPELCEDKPYNEKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh--hccccCccccCHHHhcCCCCCCccc
Confidence            5789999999   8999999999999999999999999999987654432111  1234678899999998888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||++++++++|..||.....  ......             ......+.........+.+++.+||+.+|++||++.
T Consensus       184 i~slG~il~~l~~g~~p~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (256)
T cd08529         184 VWALGVVLYECCTGKHPFDANNQ--GALILK-------------IIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTF  248 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCH--HHHHHH-------------HHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHH
Confidence            99999999999999999964431  111111             111112222223345788899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       249 ~ll~~  253 (256)
T cd08529         249 QLLRN  253 (256)
T ss_pred             HHhhC
Confidence            98763


No 130
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.95  E-value=3.7e-28  Score=184.39  Aligned_cols=141  Identities=23%  Similarity=0.362  Sum_probs=106.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++......     .....|++.|+|||++.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (291)
T cd05612         109 EIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVD  180 (291)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhh
Confidence            5789999999   899999999999999999999999999998765321     11234788999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC--
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT--  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  158 (200)
                      +|||||++|++++|..||.....  ......+.   ..        ...++..   ....+.+++.+||+.||.+||+  
T Consensus       181 iwSlG~il~~l~~g~~pf~~~~~--~~~~~~i~---~~--------~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~~  244 (291)
T cd05612         181 WWALGILIYEMLVGYPPFFDDNP--FGIYEKIL---AG--------KLEFPRH---LDLYAKDLIKKLLVVDRTRRLGNM  244 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---hC--------CcCCCcc---CCHHHHHHHHHHcCCCHHHccCCc
Confidence            99999999999999999975321  11111110   00        0111221   2346778999999999999995  


Q ss_pred             ---HHHHHHH
Q 047677          159 ---MRSVVQM  165 (200)
Q Consensus       159 ---~~~il~~  165 (200)
                         +.++++.
T Consensus       245 ~~~~~~~l~h  254 (291)
T cd05612         245 KNGADDVKNH  254 (291)
T ss_pred             cCCHHHHhcC
Confidence               7777654


No 131
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.95  E-value=2.6e-28  Score=175.96  Aligned_cols=144  Identities=26%  Similarity=0.448  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC------CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT------SK   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~------~~   74 (200)
                      |+.+|++|||   .++||||||||+||+++++.+++++|||++..+......   ....||++|+|||.+..      .+
T Consensus       131 qlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekL---relCGTPgYLAPEtikC~m~e~~pG  204 (411)
T KOG0599|consen  131 QLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKL---RELCGTPGYLAPETIKCSMYENHPG  204 (411)
T ss_pred             HHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccCCchhH---HHhcCCCcccChhheeeecccCCCC
Confidence            5789999999   899999999999999999999999999999877654322   22458999999998754      35


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC---CCchHHHHHHHHHHHHHhcCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI---PETFKENAVEILRIAVLCTTT  151 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~  151 (200)
                      |+...|.||+|+++|.++.|.+||-....     +          .-+..++.+.+   .+.+.+......+++.+||+.
T Consensus       205 Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQ-----m----------lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqV  269 (411)
T KOG0599|consen  205 YSKEVDEWACGVIMYTLLAGCPPFWHRKQ-----M----------LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQV  269 (411)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCchhHHHH-----H----------HHHHHHHhcccccCCcchhhccccHHHHHHHHHee
Confidence            78889999999999999999999953210     0          00011112222   233556666788899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 047677          152 QPALRPTMRSVVQM  165 (200)
Q Consensus       152 dp~~Rpt~~~il~~  165 (200)
                      ||.+|.|++|+++.
T Consensus       270 dp~~Ritake~LaH  283 (411)
T KOG0599|consen  270 DPTKRITAKEALAH  283 (411)
T ss_pred             CchhcccHHHHhcC
Confidence            99999999998863


No 132
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.95  E-value=3e-28  Score=187.95  Aligned_cols=140  Identities=25%  Similarity=0.351  Sum_probs=105.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......     ....|++.|+|||++.+..++.++|
T Consensus       126 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  197 (329)
T PTZ00263        126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVD  197 (329)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcce
Confidence            5789999999   8999999999999999999999999999987653321     1234789999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC--
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT--  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  158 (200)
                      +|||||++|++++|..||.....  ......+.   ..        ....+..   ....+.+++.+||+.||.+||+  
T Consensus       198 iwslG~il~elltg~~pf~~~~~--~~~~~~i~---~~--------~~~~p~~---~~~~~~~li~~~L~~dP~~R~~~~  261 (329)
T PTZ00263        198 WWTMGVLLYEFIAGYPPFFDDTP--FRIYEKIL---AG--------RLKFPNW---FDGRARDLVKGLLQTDHTKRLGTL  261 (329)
T ss_pred             eechHHHHHHHHcCCCCCCCCCH--HHHHHHHh---cC--------CcCCCCC---CCHHHHHHHHHHhhcCHHHcCCCC
Confidence            99999999999999999964321  11111110   00        0111221   2235778999999999999997  


Q ss_pred             ---HHHHHH
Q 047677          159 ---MRSVVQ  164 (200)
Q Consensus       159 ---~~~il~  164 (200)
                         +++++.
T Consensus       262 ~~~~~~ll~  270 (329)
T PTZ00263        262 KGGVADVKN  270 (329)
T ss_pred             CCCHHHHhc
Confidence               577663


No 133
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95  E-value=6.6e-28  Score=184.03  Aligned_cols=153  Identities=26%  Similarity=0.340  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.......   .......+..|++||.+.+..++.++|
T Consensus       132 qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  205 (303)
T cd05088         132 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSD  205 (303)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCccccc
Confidence            5789999999   8999999999999999999999999999885322110   011111355799999988777889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++ |..||......  ......    .         ..............+.+++.+||+.+|.+||++
T Consensus       206 i~slG~il~ellt~g~~p~~~~~~~--~~~~~~----~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  270 (303)
T cd05088         206 VWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL----P---------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF  270 (303)
T ss_pred             chhhhhHHHHHHhcCCCCcccCChH--HHHHHH----h---------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999998 99998643221  111100    0         000001111223467889999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      .++++.|+.+.....
T Consensus       271 ~~il~~l~~~~~~~~  285 (303)
T cd05088         271 AQILVSLNRMLEERK  285 (303)
T ss_pred             HHHHHHHHHHHHhhh
Confidence            999999987655543


No 134
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95  E-value=4.3e-28  Score=187.07  Aligned_cols=144  Identities=25%  Similarity=0.393  Sum_probs=104.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05618         104 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            5789999999   89999999999999999999999999999865332221  112245789999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCc---hhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGEN---KDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +|||||++|++++|..||.......   .....+.......       ....+|.   .....+.+++.+||+.||.+||
T Consensus       179 iwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-------~~~~~p~---~~~~~~~~ll~~~L~~dP~~R~  248 (329)
T cd05618         179 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-------KQIRIPR---SLSVKAASVLKSFLNKDPKERL  248 (329)
T ss_pred             eecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-------CCCCCCC---CCCHHHHHHHHHHhcCCHHHcC
Confidence            9999999999999999996422111   1111111100000       0111222   2234677899999999999999


Q ss_pred             CH
Q 047677          158 TM  159 (200)
Q Consensus       158 t~  159 (200)
                      ++
T Consensus       249 ~~  250 (329)
T cd05618         249 GC  250 (329)
T ss_pred             CC
Confidence            84


No 135
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95  E-value=7.1e-29  Score=185.40  Aligned_cols=148  Identities=30%  Similarity=0.491  Sum_probs=105.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +++++|++|++.||+++.++.+||+|||++....................|+|||.+....++.++|
T Consensus       111 ~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksD  187 (259)
T PF07714_consen  111 QIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSD  187 (259)
T ss_dssp             HHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHH
T ss_pred             cccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999   7899999999999999999999999999987663222121122223567899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |||||+++||+++ |..||...  ....+...+.             ..............+.+++..||..||.+|||+
T Consensus       188 VysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~  252 (259)
T PF07714_consen  188 VYSFGMLLYEILTLGKFPFSDY--DNEEIIEKLK-------------QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSF  252 (259)
T ss_dssp             HHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHHH-------------TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--H
T ss_pred             cccccccccccccccccccccc--cccccccccc-------------ccccceeccchhHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999999 67887644  2222222111             011111111223467889999999999999999


Q ss_pred             HHHHHHH
Q 047677          160 RSVVQML  166 (200)
Q Consensus       160 ~~il~~L  166 (200)
                      .++++.|
T Consensus       253 ~~i~~~L  259 (259)
T PF07714_consen  253 QEILQEL  259 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhcC
Confidence            9999876


No 136
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.95  E-value=1.6e-27  Score=178.60  Aligned_cols=151  Identities=25%  Similarity=0.435  Sum_probs=111.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceee-eecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTH-VIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~-~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   +.|++|+||||+||+++.++.++++|||++............. ....+..|++||.+.+..++.++
T Consensus       115 ~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  191 (268)
T cd05063         115 GIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSAS  191 (268)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHh
Confidence            5789999999   8999999999999999999999999999987654322111111 11124569999998888889999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|||||++|++++ |..||.....  ......+.   .          ....+........+.+++.+||+.+|++||+
T Consensus       192 Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~---~----------~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~  256 (268)
T cd05063         192 DVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAIN---D----------GFRLPAPMDCPSAVYQLMLQCWQQDRARRPR  256 (268)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHh---c----------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            99999999999997 9999864321  11111111   0          0011111223456789999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++++.|+++
T Consensus       257 ~~~i~~~l~~~  267 (268)
T cd05063         257 FVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875


No 137
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95  E-value=7.2e-28  Score=181.85  Aligned_cols=147  Identities=27%  Similarity=0.356  Sum_probs=108.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||.+.........  .....++..|+|||.+.+..++.++|
T Consensus       105 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~D  179 (280)
T cd05608         105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMAPELLQGEEYDFSVD  179 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--ccccCCCcCccCHHHhcCCCCCcccc
Confidence            6889999999   899999999999999999999999999998765432211  12235788999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|++++|..||.......... ...          ....... ..........+.+++.+||+.||++||   
T Consensus       180 vwslG~il~el~~g~~pf~~~~~~~~~~-~~~----------~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (280)
T cd05608         180 YFALGVTLYEMIAARGPFRARGEKVENK-ELK----------QRILNDS-VTYPDKFSPASKSFCEALLAKDPEKRLGFR  247 (280)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcchhHH-HHH----------HhhcccC-CCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence            9999999999999999997533211100 000          0000000 011122344677899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        |++++++
T Consensus       248 ~~~~~~~l~  256 (280)
T cd05608         248 DGNCDGLRT  256 (280)
T ss_pred             CCCHHHHhc
Confidence              6676665


No 138
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=1.7e-27  Score=183.86  Aligned_cols=157  Identities=24%  Similarity=0.436  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||+  ..+++|+||||+||+++.++.++|+|||++.......    .....++..|+|||++.+..++.++|
T Consensus       111 ~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~D  184 (331)
T cd06649         111 AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSD  184 (331)
T ss_pred             HHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHh
Confidence            57899999994  2469999999999999999999999999986553221    12234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhh-cccc-------------------------------h-hhhhcc
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHF-NSKQ-------------------------------S-VLTLVD  127 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~-------------------------------~-~~~~~~  127 (200)
                      +|||||++|++++|..||......  .....+.... ....                               . ......
T Consensus       185 iwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (331)
T cd06649         185 IWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVN  262 (331)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHh
Confidence            999999999999999999643221  1111110000 0000                               0 000000


Q ss_pred             CCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          128 SSIPET-FKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       128 ~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ...+.. .......+.+++.+||..||++|||+.++++.
T Consensus       263 ~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         263 EPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             CCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            001110 11234578899999999999999999999865


No 139
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.94  E-value=1e-27  Score=194.88  Aligned_cols=160  Identities=22%  Similarity=0.259  Sum_probs=122.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-------eeeecccccccccccc---
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-------THVIAGTTGYIAPEYG---   70 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~---   70 (200)
                      |+|+|+++||.+ +--|||||||.+|||++.++..||||||.+.......+...       .-....|+.|++||++   
T Consensus       152 dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly  230 (738)
T KOG1989|consen  152 DVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY  230 (738)
T ss_pred             HHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh
Confidence            689999999943 33499999999999999999999999999854332221110       0112368899999975   


Q ss_pred             cCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhc
Q 047677           71 YTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCT  149 (200)
Q Consensus        71 ~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl  149 (200)
                      .+..++.|+|||||||++|.|+....||...                   ....+++..+... +......|.+||..||
T Consensus       231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~s-------------------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL  291 (738)
T KOG1989|consen  231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEES-------------------GKLAILNGNYSFPPFPNYSDRLKDLIRTML  291 (738)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHhCCCcCcC-------------------cceeEEeccccCCCCccHHHHHHHHHHHHh
Confidence            4556899999999999999999999999632                   1233444444333 2456678889999999


Q ss_pred             CCCCCCCCCHHHHHHHHHhhCCCCccceeec
Q 047677          150 TTQPALRPTMRSVVQMLEEAEPCNLVGIVIS  180 (200)
Q Consensus       150 ~~dp~~Rpt~~~il~~L~~~~~~~~~~~~~~  180 (200)
                      +.||.+||++-+++..+..+.....-...+.
T Consensus       292 ~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~  322 (738)
T KOG1989|consen  292 QPNPDERPNIYQVLEEIFELANKPCPIPDIY  322 (738)
T ss_pred             ccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence            9999999999999999988887766554443


No 140
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94  E-value=2.1e-27  Score=178.29  Aligned_cols=152  Identities=21%  Similarity=0.352  Sum_probs=112.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   +.|++|+||||+||+++.++.++++|||++.......... .....+...|++||.+....++.++|
T Consensus       115 ~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  190 (270)
T cd05056         115 QLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK-ASKGKLPIKWMAPESINFRRFTSASD  190 (270)
T ss_pred             HHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccccccee-cCCCCccccccChhhhccCCCCchhh
Confidence            5789999999   8999999999999999999999999999987654321111 11112345799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .....+.             ..............+.+++.+|+..+|.+|||+
T Consensus       191 i~slG~il~el~~~g~~pf~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  255 (270)
T cd05056         191 VWMFGVCMWEILMLGVKPFQGVKNN--DVIGRIE-------------NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRF  255 (270)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHH-------------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999986 99999654321  1111110             000111112223468889999999999999999


Q ss_pred             HHHHHHHHhhCC
Q 047677          160 RSVVQMLEEAEP  171 (200)
Q Consensus       160 ~~il~~L~~~~~  171 (200)
                      .++++.|+++..
T Consensus       256 ~~~~~~l~~~~~  267 (270)
T cd05056         256 TELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754


No 141
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.94  E-value=3.9e-28  Score=186.84  Aligned_cols=138  Identities=31%  Similarity=0.461  Sum_probs=104.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|
T Consensus       109 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05616         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999865432211  122245789999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++|..||.....  ......+.   .        ....++.   .....+.+++.+||+.||.+|++.
T Consensus       184 iwSlGvil~elltg~~Pf~~~~~--~~~~~~i~---~--------~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         184 WWAFGVLLYEMLAGQAPFEGEDE--DELFQSIM---E--------HNVAYPK---SMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             hhchhHHHHHHHhCCCCCCCCCH--HHHHHHHH---h--------CCCCCCC---cCCHHHHHHHHHHcccCHHhcCCC
Confidence            99999999999999999974321  11111111   0        0111222   233467789999999999999984


No 142
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=1.7e-27  Score=177.35  Aligned_cols=144  Identities=25%  Similarity=0.485  Sum_probs=109.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||...+..++.++|
T Consensus       110 ~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  184 (257)
T cd08223         110 QIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSD  184 (257)
T ss_pred             HHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhh
Confidence            5788999999   89999999999999999999999999999876643321  112234688899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|++++++++|..||......  ..   ..          .......+.........+.+++.+||+.+|.+|||+.
T Consensus       185 v~slG~il~~l~~g~~~~~~~~~~--~~---~~----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  249 (257)
T cd08223         185 VWALGCCVYEMATLKHAFNAKDMN--SL---VY----------RIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVK  249 (257)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCHH--HH---HH----------HHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHH
Confidence            999999999999999998643211  11   00          0011111122223445788899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       250 ~~l~  253 (257)
T cd08223         250 SILR  253 (257)
T ss_pred             HHhc
Confidence            9875


No 143
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.94  E-value=7.1e-28  Score=188.22  Aligned_cols=143  Identities=29%  Similarity=0.432  Sum_probs=115.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   +++|.|||+||.||++++.+.+|++|||+++.+..+  ......+.||+.|+|||...+..|+..+|
T Consensus       108 ~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sD  182 (808)
T KOG0597|consen  108 DLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSD  182 (808)
T ss_pred             HHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccC--ceeeeeccCcccccCHHHHcCCCccchhh
Confidence            5788999999   899999999999999999999999999999887653  33445567999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      .||+||++||+++|++||...     ++..           +.+.+...-...+......+..++...|..||..|.|-.
T Consensus       183 lWslGcilYE~~~G~PPF~a~-----si~~-----------Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~  246 (808)
T KOG0597|consen  183 LWSLGCILYELYVGQPPFYAR-----SITQ-----------LVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWT  246 (808)
T ss_pred             HHHHHHHHHHHhcCCCCchHH-----HHHH-----------HHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHH
Confidence            999999999999999999632     1111           112222222222336667888999999999999999988


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       247 ~Ll~  250 (808)
T KOG0597|consen  247 DLLG  250 (808)
T ss_pred             HHhc
Confidence            8764


No 144
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=2.9e-28  Score=187.96  Aligned_cols=145  Identities=26%  Similarity=0.403  Sum_probs=119.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|+.|||   ++.|+|||||+.||++.+++.++|+|||+++.+.....  ......||+.|++||++.+..|..++|
T Consensus       114 Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSD  188 (426)
T KOG0589|consen  114 QILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS--LASTVVGTPYYMCPEILSDIPYNEKSD  188 (426)
T ss_pred             HHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchh--hhheecCCCcccCHHHhCCCCCCccCc
Confidence            6889999999   78899999999999999999999999999988765432  333466999999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      ||||||++||+.+-+++|......               .-..++....+.+.+.....++..++..|+..+|..||++.
T Consensus       189 iWsLGC~~yEm~~lk~aF~a~~m~---------------~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~  253 (426)
T KOG0589|consen  189 IWSLGCCLYEMCTLKPAFKASNMS---------------ELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSAL  253 (426)
T ss_pred             chhhcchHHHHHhcccccCccchH---------------HHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHH
Confidence            999999999999999999744211               12222333334455566667888899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       254 ~LL~~  258 (426)
T KOG0589|consen  254 ELLRR  258 (426)
T ss_pred             HHhhC
Confidence            99876


No 145
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.94  E-value=2.1e-28  Score=188.54  Aligned_cols=142  Identities=25%  Similarity=0.333  Sum_probs=105.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|
T Consensus       104 qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05602         104 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999865432211  122245889999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|+|++|..||......  .....+.   ..        ....+.   .....+.+++.+||+.||.+|+++.
T Consensus       179 iwslG~il~el~~g~~pf~~~~~~--~~~~~i~---~~--------~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~  242 (325)
T cd05602         179 WWCLGAVLYEMLYGLPPFYSRNTA--EMYDNIL---NK--------PLQLKP---NITNSARHLLEGLLQKDRTKRLGAK  242 (325)
T ss_pred             cccccHHHHHHhcCCCCCCCCCHH--HHHHHHH---hC--------CcCCCC---CCCHHHHHHHHHHcccCHHHCCCCC
Confidence            999999999999999999743211  1111110   00        001111   2234677888899999999999987


Q ss_pred             HHH
Q 047677          161 SVV  163 (200)
Q Consensus       161 ~il  163 (200)
                      +.+
T Consensus       243 ~~~  245 (325)
T cd05602         243 DDF  245 (325)
T ss_pred             CCH
Confidence            543


No 146
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94  E-value=1.7e-27  Score=177.86  Aligned_cols=149  Identities=30%  Similarity=0.457  Sum_probs=110.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   +.|++|+||+|.||+++.++.++|+|||++........ .......++..|++||...+..++.++|
T Consensus       110 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~D  185 (260)
T cd05067         110 QIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSD  185 (260)
T ss_pred             HHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccc
Confidence            5789999999   89999999999999999999999999999876542211 1111223456899999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........          .......   .......+.+++.+||+.+|++|||+
T Consensus       186 i~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~----------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         186 VWSFGILLTEIVTYGRIPYPGMTN--PEVIQNLE----------RGYRMPR---PDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHH----------cCCCCCC---CCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9999999999998 9999964321  11111110          0000111   11223468889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      ++++..|+.
T Consensus       251 ~~l~~~l~~  259 (260)
T cd05067         251 EYLRSVLED  259 (260)
T ss_pred             HHHHHHhhc
Confidence            999999875


No 147
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.94  E-value=7.4e-28  Score=184.61  Aligned_cols=98  Identities=32%  Similarity=0.446  Sum_probs=79.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEe----CCCCCeeecccccceeeccCCCc-ceeeeecccccccccccccCC-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILL----DEFLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTS-K   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~----~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~-~   74 (200)
                      |+++||.|||   ++|++||||||+||++    ..++.++|+|||++......... .......++..|+|||.+.+. .
T Consensus       116 qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07867         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCc
Confidence            6889999999   8999999999999999    45678999999999765433211 112223478899999988764 4


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPE  101 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~  101 (200)
                      ++.++|+|||||++|++++|..||...
T Consensus       193 ~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         193 YTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            788999999999999999999999643


No 148
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.6e-27  Score=190.33  Aligned_cols=162  Identities=20%  Similarity=0.292  Sum_probs=109.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++||+||||||+||+++.++.++|+|||++................|+..|++||++.+..++.++|
T Consensus       268 qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sD  344 (461)
T PHA03211        268 QLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVD  344 (461)
T ss_pred             HHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHH
Confidence            6889999999   8999999999999999999999999999987654322222222345899999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCC------chhHHHHHHHhhcccch--------hhhhc-----cCCCCC----c---h
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGE------NKDIVRWVCSHFNSKQS--------VLTLV-----DSSIPE----T---F  134 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~----~---~  134 (200)
                      +|||||++|++++|..++......      ...+...+.........        .....     ....+.    .   .
T Consensus       345 vwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  424 (461)
T PHA03211        345 IWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY  424 (461)
T ss_pred             HHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence            999999999999987655432211      11122221110000000        00000     000000    0   1


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          135 KENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       135 ~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ......+.+|+.+||+.||.+|||+.|+++.
T Consensus       425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        425 YKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             ccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1222367789999999999999999999864


No 149
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94  E-value=9.4e-28  Score=178.67  Aligned_cols=145  Identities=28%  Similarity=0.441  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||+|.||+++.++.++++|||.+..........  ....++..|+|||++.+..++.++|
T Consensus       108 ~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~D  182 (255)
T cd08219         108 QMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA--CTYVGTPYYVPPEIWENMPYNNKSD  182 (255)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc--ccccCCccccCHHHHccCCcCchhh
Confidence            5789999999   8999999999999999999999999999987654332111  1234778899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||......  ....             ..........+......+.+++.+||+.||.+|||+.
T Consensus       183 v~slG~i~~~l~~g~~p~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~  247 (255)
T cd08219         183 IWSLGCILYELCTLKHPFQANSWK--NLIL-------------KVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSAT  247 (255)
T ss_pred             hhhhchhheehhhccCCCCCCCHH--HHHH-------------HHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHH
Confidence            999999999999999999643211  1100             0011111111122234677899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       248 ~il~~  252 (255)
T cd08219         248 TILSR  252 (255)
T ss_pred             HHhhc
Confidence            99864


No 150
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94  E-value=1.2e-27  Score=178.37  Aligned_cols=147  Identities=30%  Similarity=0.436  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++++|||.+......... ......++..|++||...+..++.++|
T Consensus       108 qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~D  183 (256)
T cd05059         108 DVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhh
Confidence            5789999999   899999999999999999999999999998765432111 111112345799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .....+.          .......+   ......+.+++.+||+.+|++|||+
T Consensus       184 i~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~----------~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rpt~  248 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMPYERFSNS--EVVESVS----------AGYRLYRP---KLAPTEVYTIMYSCWHEKPEDRPAF  248 (256)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHH----------cCCcCCCC---CCCCHHHHHHHHHHhcCChhhCcCH
Confidence            9999999999998 78888643221  1111110          00011111   1234478889999999999999999


Q ss_pred             HHHHHHH
Q 047677          160 RSVVQML  166 (200)
Q Consensus       160 ~~il~~L  166 (200)
                      .++++.|
T Consensus       249 ~~~l~~l  255 (256)
T cd05059         249 KKLLSQL  255 (256)
T ss_pred             HHHHHHh
Confidence            9999886


No 151
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.94  E-value=8e-28  Score=185.55  Aligned_cols=148  Identities=24%  Similarity=0.383  Sum_probs=106.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05588         104 EISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999864322211  122245789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCc---hhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGEN---KDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +|||||++|++++|..||.......   .....+.......       .....|..   ....+.+++.+||+.||.+|+
T Consensus       179 iwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~p~~---~~~~~~~li~~~L~~dP~~R~  248 (329)
T cd05588         179 WWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-------KQIRIPRS---LSVKASSVLKGFLNKDPKERL  248 (329)
T ss_pred             eechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-------CCCCCCCC---CCHHHHHHHHHHhccCHHHcC
Confidence            9999999999999999996432111   1011111100000       00112222   234677899999999999999


Q ss_pred             C------HHHHH
Q 047677          158 T------MRSVV  163 (200)
Q Consensus       158 t------~~~il  163 (200)
                      |      +++++
T Consensus       249 ~~~~~~~~~~i~  260 (329)
T cd05588         249 GCHPQTGFRDIK  260 (329)
T ss_pred             CCCCCCCHHHHh
Confidence            8      55665


No 152
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94  E-value=1.2e-27  Score=180.86  Aligned_cols=165  Identities=23%  Similarity=0.344  Sum_probs=111.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc-eeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD-TTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++.......... ......++..|+|||...+..++.++
T Consensus       117 ~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~  193 (284)
T cd05079         117 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIAS  193 (284)
T ss_pred             HHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccc
Confidence            5789999999   8999999999999999999999999999987654332211 11123356679999998888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhc-cCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLV-DSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|+++++..|+................... ........ ..............+.+++.+||+.||++|||
T Consensus       194 Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  272 (284)
T cd05079         194 DVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT-VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT  272 (284)
T ss_pred             cchhhhhhhhhhhcCCCCCccccchhhhhccccccccc-HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence            99999999999999776543221100000000000000 00000000 00111111223457888999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++++.|+.+
T Consensus       273 ~~~il~~l~~~  283 (284)
T cd05079         273 FQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875


No 153
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94  E-value=4.1e-28  Score=186.70  Aligned_cols=139  Identities=27%  Similarity=0.348  Sum_probs=104.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++||||||.||+++.++.++|+|||++........  ......|++.|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (323)
T cd05575         104 EIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVD  178 (323)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCcccc
Confidence            6889999999   89999999999999999999999999999865322211  122235789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||.....  ......+   ...        ....+.   .....+.+++.+||+.||.+||++.
T Consensus       179 vwslG~il~ell~g~~pf~~~~~--~~~~~~i---~~~--------~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         179 WWCLGAVLYEMLYGLPPFYSRDT--AEMYDNI---LNK--------PLRLKP---NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             ccccchhhhhhhcCCCCCCCCCH--HHHHHHH---HcC--------CCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            99999999999999999974321  1111100   000        011111   1234677899999999999999985


No 154
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.94  E-value=2.3e-27  Score=176.16  Aligned_cols=150  Identities=25%  Similarity=0.358  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+.................+..|++||.+.+..++.++|
T Consensus       101 ~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  177 (251)
T cd05041         101 DAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESD  177 (251)
T ss_pred             HHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchh
Confidence            4678999999   8999999999999999999999999999986543211111111111345699999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .......          .......   +......+.+++.+||..+|.+|||+
T Consensus       178 i~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~----------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~  242 (251)
T cd05041         178 VWSYGILLWETFSLGDTPYPGMSNQ--QTRERIE----------SGYRMPA---PQLCPEEIYRLMLQCWAYDPENRPSF  242 (251)
T ss_pred             HHHHHHHHHHHHhccCCCCccCCHH--HHHHHHh----------cCCCCCC---CccCCHHHHHHHHHHhccChhhCcCH
Confidence            9999999999999 78888654321  1111110          0000111   11223478889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       243 ~ell~~l~~  251 (251)
T cd05041         243 SEIYNELQI  251 (251)
T ss_pred             HHHHHHhhC
Confidence            999998863


No 155
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94  E-value=8.4e-28  Score=185.30  Aligned_cols=144  Identities=24%  Similarity=0.355  Sum_probs=104.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       104 qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (327)
T cd05617         104 EICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVD  178 (327)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--ceecccCCcccCCHHHHCCCCCCchhe
Confidence            6889999999   89999999999999999999999999999865332211  122345889999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCc-hhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGEN-KDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|||||++|++++|..||....... ............       ......+..   ....+.+++.+||+.||.+|+++
T Consensus       179 iwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~p~~---~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         179 WWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-------EKPIRIPRF---LSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             eehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-------hCCCCCCCC---CCHHHHHHHHHHhccCHHHcCCC
Confidence            9999999999999999996432211 111111110000       000112222   23456788999999999999985


No 156
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94  E-value=8.9e-28  Score=190.33  Aligned_cols=143  Identities=29%  Similarity=0.396  Sum_probs=111.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCC-CCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV-DEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~-~~~~   79 (200)
                      ||+.|+.|+|   ..+|+||||||+|++++..+++|++|||.|.........   ..-.|.+.|++||++.+..| ..++
T Consensus       120 QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL---eTSCGSPHYA~PEIV~G~pYdG~~s  193 (786)
T KOG0588|consen  120 QILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL---ETSCGSPHYAAPEIVSGRPYDGRPS  193 (786)
T ss_pred             HHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCccc---cccCCCcccCCchhhcCCCCCCCcc
Confidence            7899999999   788999999999999999999999999999765443221   12348999999999999998 4789


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      ||||.|+++|.+++|..||+..     .+.....          +...+.+ +.+.....+..+|+.+|+..||++|+|+
T Consensus       194 DVWSCGVILfALLtG~LPFdDd-----Nir~LLl----------KV~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~  257 (786)
T KOG0588|consen  194 DVWSCGVILFALLTGKLPFDDD-----NIRVLLL----------KVQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITT  257 (786)
T ss_pred             ccchhHHHHHHHHhCCCCCCCc-----cHHHHHH----------HHHcCcc-cCCCcCCHHHHHHHHHHhccCccccccH
Confidence            9999999999999999999721     2222111          1111111 1223444577788999999999999999


Q ss_pred             HHHHHH
Q 047677          160 RSVVQM  165 (200)
Q Consensus       160 ~~il~~  165 (200)
                      ++|++.
T Consensus       258 ~eI~kH  263 (786)
T KOG0588|consen  258 EEILKH  263 (786)
T ss_pred             HHHhhC
Confidence            999874


No 157
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.94  E-value=5.7e-28  Score=186.65  Aligned_cols=149  Identities=20%  Similarity=0.271  Sum_probs=109.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++.....     ......|++.|+|||++.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (333)
T cd05600         109 EMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVD  180 (333)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccc
Confidence            5789999999   89999999999999999999999999999865433     112234789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|+|++|..||......  .....+...   ...   ...+............+.+++.+||..+|.+||++.
T Consensus       181 vwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~---~~~---~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~  252 (333)
T cd05600         181 YWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKYW---KET---LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLE  252 (333)
T ss_pred             eecchHHHhhhhhCCCCCCCCCHH--HHHHHHHhc---ccc---ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHH
Confidence            999999999999999999753221  111111100   000   000111110122345778899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       253 ~ll~h  257 (333)
T cd05600         253 DIKNH  257 (333)
T ss_pred             HHHhC
Confidence            99864


No 158
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=5e-27  Score=182.99  Aligned_cols=92  Identities=36%  Similarity=0.519  Sum_probs=77.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++||+||||||+||+++..+.++|+|||++.......   ......|+..|++||++.+..++.++|
T Consensus       165 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~D  238 (357)
T PHA03209        165 QILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKAD  238 (357)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc---ccccccccccccCCeecCCCCCCchhh
Confidence            6889999999   8999999999999999999999999999986432211   112234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPI   98 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf   98 (200)
                      +|||||++|+++++..++
T Consensus       239 iwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        239 IWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             HHHHHHHHHHHHHcCCcc
Confidence            999999999999865554


No 159
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94  E-value=2.3e-27  Score=176.73  Aligned_cols=150  Identities=31%  Similarity=0.460  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-ceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||++......... .......++..|++||...+..++.++
T Consensus       105 qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~  181 (257)
T cd05040         105 QIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHAS  181 (257)
T ss_pred             HHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchh
Confidence            5789999999   899999999999999999999999999998766442211 111112356789999998888889999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|||||++|++++ |..||......  .....+..            ..............+.+++.+||+.+|++|||
T Consensus       182 Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  247 (257)
T cd05040         182 DVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDK------------EGERLERPEACPQDIYNVMLQCWAHNPADRPT  247 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHh------------cCCcCCCCccCCHHHHHHHHHHCCCCcccCCC
Confidence            99999999999998 99998643221  11111110            00000111122346888999999999999999


Q ss_pred             HHHHHHHHH
Q 047677          159 MRSVVQMLE  167 (200)
Q Consensus       159 ~~~il~~L~  167 (200)
                      +.++++.|.
T Consensus       248 ~~~~~~~l~  256 (257)
T cd05040         248 FAALREFLP  256 (257)
T ss_pred             HHHHHHHhc
Confidence            999999875


No 160
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94  E-value=3.6e-27  Score=177.93  Aligned_cols=149  Identities=26%  Similarity=0.435  Sum_probs=109.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||++.......    .....++..|++||.+.+..++.++|
T Consensus       103 qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D  175 (279)
T cd06619         103 AVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIHSD  175 (279)
T ss_pred             HHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCcch
Confidence            5889999999   8999999999999999999999999999987654321    11234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhH--HHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDI--VRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|||||++|++++|..||..........  .........       ......+.  ......+.+++.+||+.+|++||+
T Consensus       176 vwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~  246 (279)
T cd06619         176 VWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD-------EDPPVLPV--GQFSEKFVHFITQCMRKQPKERPA  246 (279)
T ss_pred             HHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc-------cCCCCCCC--CcCCHHHHHHHHHHhhCChhhCCC
Confidence            9999999999999999996533221111  000000000       00011111  112346788999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      ++++++.
T Consensus       247 ~~eil~~  253 (279)
T cd06619         247 PENLMDH  253 (279)
T ss_pred             HHHHhcC
Confidence            9998764


No 161
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.94  E-value=2.2e-27  Score=184.05  Aligned_cols=156  Identities=24%  Similarity=0.353  Sum_probs=107.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++.......     ....++..|+|||++.+ ..++.++
T Consensus       126 qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07878         126 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCCCc-----CCccccccccCchHhcCCccCCchh
Confidence            6899999999   8999999999999999999999999999987654321     12347889999999876 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhh---------hhcc--CCCCCc-----hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVL---------TLVD--SSIPET-----FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~-----~~~~~~~~~~  143 (200)
                      |+|||||++|++++|..||....... .................         ....  +..+..     .....+.+.+
T Consensus       198 DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (343)
T cd07878         198 DIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAID  276 (343)
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHH
Confidence            99999999999999999996432111 11111000000000000         0000  000100     0112235678


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ++.+||..||.+|||+.++++.
T Consensus       277 li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         277 LLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhcC
Confidence            9999999999999999999854


No 162
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.94  E-value=3.6e-27  Score=175.52  Aligned_cols=145  Identities=28%  Similarity=0.439  Sum_probs=108.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++||||||.||+++.++.++|+|||++........     ....+..|++||.+.+..++.++|
T Consensus       108 qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~y~~pe~~~~~~~~~~~D  179 (254)
T cd05083         108 DVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD-----NSKLPVKWTAPEALKHKKFSSKSD  179 (254)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCC-----CCCCCceecCHHHhccCCcCchhh
Confidence            5789999999   89999999999999999999999999999865432111     112356799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  ......    ..      ......   .......+.+++.+||+.+|++||++
T Consensus       180 v~slG~~l~el~~~g~~p~~~~~~~--~~~~~~----~~------~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         180 VWSYGVLLWEVFSYGRAPYPKMSLK--EVKECV----EK------GYRMEP---PEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH----hC------CCCCCC---CCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            9999999999998 88888643221  111111    00      000111   11223567889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|++
T Consensus       245 ~~l~~~l~~  253 (254)
T cd05083         245 HKLREKLEK  253 (254)
T ss_pred             HHHHHHHcc
Confidence            999998864


No 163
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94  E-value=8.9e-28  Score=200.84  Aligned_cols=156  Identities=28%  Similarity=0.407  Sum_probs=118.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |||+|+.||+   ++.+|||||-..|||++....+|++|||+++...............-...|+|||.+....++.++|
T Consensus       810 dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSD  886 (1025)
T KOG1095|consen  810 DVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSD  886 (1025)
T ss_pred             HHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccc
Confidence            6899999999   7889999999999999999999999999998544333222222223357899999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |||||+++||+++ |..||....+.  ++...+.             .+...+.+......++++|..||+.+|++||++
T Consensus       887 vWsFGVllWEifslG~~PY~~~~n~--~v~~~~~-------------~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F  951 (1025)
T KOG1095|consen  887 VWSFGVLLWEIFSLGATPYPSRSNF--EVLLDVL-------------EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSF  951 (1025)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCcchH--HHHHHHH-------------hCCccCCCCCCChHHHHHHHHHccCChhhCccH
Confidence            9999999999999 88998754332  2222111             111112223334478899999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      ..|++.+........
T Consensus       952 ~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  952 RTIVEQDPAISNAAL  966 (1025)
T ss_pred             HHHHhhhhhhhhhhc
Confidence            999998877655443


No 164
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94  E-value=4.2e-27  Score=175.73  Aligned_cols=149  Identities=31%  Similarity=0.479  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   +.|++|+||+|.||+++..+.++|+|||.+........ .......++..|++||++....++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~D  185 (260)
T cd05073         110 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-ccccCCcccccccCHhHhccCCcCcccc
Confidence            5789999999   78999999999999999999999999999876543221 1111123456799999998888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........             .....+........+.+++.+||+.+|++||++
T Consensus       186 i~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         186 VWSFGILLMEIVTYGRIPYPGMSN--PEVIRALE-------------RGYRMPRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             chHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHh-------------CCCCCCCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            9999999999998 8889864321  11111110             000001112233468889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|+.
T Consensus       251 ~~l~~~L~~  259 (260)
T cd05073         251 EYIQSVLDD  259 (260)
T ss_pred             HHHHHHHhc
Confidence            999999975


No 165
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=4.2e-28  Score=203.57  Aligned_cols=148  Identities=28%  Similarity=0.411  Sum_probs=112.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC-cce-eeeecccccccccccccCCC---C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG-KDT-THVIAGTTGYIAPEYGYTSK---V   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~-~~~~~~~~~~~~pE~~~~~~---~   75 (200)
                      |+++|++|||   ++|||||||||.||+++.+|.+|++|||.+.....+.. ... .....||+.|+|||++.+..   .
T Consensus      1342 qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~ 1418 (1509)
T KOG4645|consen 1342 QLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGH 1418 (1509)
T ss_pred             HHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCC
Confidence            6889999999   89999999999999999999999999999988765521 111 12346999999999987653   4


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      ..++||||+||++.||+||+.||....+.   +           .......-+..|+.+......-.+++..||..||++
T Consensus      1419 ~~A~DiWslGCVVlEM~tGkrPW~~~dne---~-----------aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~ 1484 (1509)
T KOG4645|consen 1419 GGAADIWSLGCVVLEMATGKRPWAELDNE---W-----------AIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKM 1484 (1509)
T ss_pred             CcchhhhcccceEEEeecCCCchhhccch---h-----------HHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchh
Confidence            57899999999999999999999754332   1           111112223333333335556667888999999999


Q ss_pred             CCCHHHHHHH
Q 047677          156 RPTMRSVVQM  165 (200)
Q Consensus       156 Rpt~~~il~~  165 (200)
                      |.++.|+++.
T Consensus      1485 Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1485 RWTASQLLEH 1494 (1509)
T ss_pred             hhHHHHHHHh
Confidence            9999888764


No 166
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.94  E-value=4.8e-27  Score=173.24  Aligned_cols=159  Identities=26%  Similarity=0.243  Sum_probs=112.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++|++|||   .+.|+|||||++|++++..|.+|++|||+|+.++++...-+.  .+-|..|.|||.+.+.. |+...
T Consensus       185 QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~--lVVTLWYRaPELLLG~~tyst~i  259 (419)
T KOG0663|consen  185 QLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTP--LVVTLWYRAPELLLGAKTYSTAV  259 (419)
T ss_pred             HHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcc--eEEEeeecCHHHhcCCcccCcch
Confidence            7899999999   899999999999999999999999999999988776322222  22488999999988764 89999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhh------h----hccCCCCCc-----hHH--HHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVL------T----LVDSSIPET-----FKE--NAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~-----~~~--~~~~~~  142 (200)
                      |+||+||++.|++++.+.|.....-+.-.. .+...........      .    .-....+.+     +..  ....-.
T Consensus       260 DMWSvGCI~aE~l~~kPlf~G~sE~dQl~~-If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~  338 (419)
T KOG0663|consen  260 DMWSVGCIFAELLTQKPLFPGKSEIDQLDK-IFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGF  338 (419)
T ss_pred             hhhhHHHHHHHHHhcCCCCCCCchHHHHHH-HHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHH
Confidence            999999999999999998876543332221 1111111000000      0    000111111     111  224567


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      +++..+|..||.+|.|+++.++.
T Consensus       339 ~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  339 DLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             HHHHHHhccCccccccHHHhhcc
Confidence            78899999999999999999875


No 167
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94  E-value=2.4e-27  Score=179.14  Aligned_cols=163  Identities=27%  Similarity=0.367  Sum_probs=110.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-eeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++........... .....++..|++||...+..++.++
T Consensus       116 ~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  192 (284)
T cd05081         116 QICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVAS  192 (284)
T ss_pred             HHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHH
Confidence            5789999999   89999999999999999999999999999876543221111 1111133458999998888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc---ccchhhhhccCC-CCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN---SKQSVLTLVDSS-IPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      |+||||+++|++++|..++......   +.........   ........+... ...........+.+++.+||..+|++
T Consensus       193 Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  269 (284)
T cd05081         193 DVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ  269 (284)
T ss_pred             HHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence            9999999999999987765432111   0000000000   000000011110 11111222346888999999999999


Q ss_pred             CCCHHHHHHHHHhh
Q 047677          156 RPTMRSVVQMLEEA  169 (200)
Q Consensus       156 Rpt~~~il~~L~~~  169 (200)
                      |||+.++++.|+++
T Consensus       270 Rpt~~ei~~~l~~~  283 (284)
T cd05081         270 RPSFSELALQVEAI  283 (284)
T ss_pred             CCCHHHHHHHHHhc
Confidence            99999999999875


No 168
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94  E-value=2.8e-27  Score=186.50  Aligned_cols=152  Identities=26%  Similarity=0.392  Sum_probs=112.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||.||+++..+.++|+|||++................++..|++||.+....++.++|
T Consensus       247 qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         247 QVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            5789999999   8999999999999999999999999999987653322111111233567899999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||........ ....+.    ..      .....+.   .....+.+++.+||+.+|.+||++
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~~~~~-~~~~~~----~~------~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~  389 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELPMNEQ-FYNAIK----RG------YRMAKPA---HASDEIYEIMQKCWEEKFEIRPDF  389 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCchHH-HHHHHH----cC------CCCCCCC---CCCHHHHHHHHHHcCCChhHCcCH
Confidence            9999999999998 8888864322111 111000    00      0011111   223578889999999999999999


Q ss_pred             HHHHHHHHhh
Q 047677          160 RSVVQMLEEA  169 (200)
Q Consensus       160 ~~il~~L~~~  169 (200)
                      +++++.|+++
T Consensus       390 ~ell~~L~~~  399 (401)
T cd05107         390 SQLVHLVGDL  399 (401)
T ss_pred             HHHHHHHHHH
Confidence            9999999876


No 169
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94  E-value=6.8e-28  Score=185.35  Aligned_cols=139  Identities=27%  Similarity=0.350  Sum_probs=103.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||++||.|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05603         104 EVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCc
Confidence            6889999999   89999999999999999999999999999865322211  122235789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||.....  ......+.   ..        ....+   ......+.+++.+||+.||.+||++.
T Consensus       179 iwslG~il~el~~g~~pf~~~~~--~~~~~~i~---~~--------~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         179 WWCLGAVLYEMLYGLPPFYSRDV--SQMYDNIL---HK--------PLQLP---GGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ccccchhhhhhhcCCCCCCCCCH--HHHHHHHh---cC--------CCCCC---CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            99999999999999999965321  11111100   00        01111   12234677899999999999999764


No 170
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.94  E-value=9.6e-28  Score=185.81  Aligned_cols=141  Identities=23%  Similarity=0.317  Sum_probs=106.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++......     .....|++.|+|||++.+..++.++|
T Consensus       139 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  210 (340)
T PTZ00426        139 QIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAAD  210 (340)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCcccc
Confidence            5789999999   899999999999999999999999999998765321     12245889999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +|||||++|+|++|..||......  .....+.   ..        ...++...   ...+.+++.+||+.||.+|+   
T Consensus       211 iwSlGvil~ell~G~~Pf~~~~~~--~~~~~i~---~~--------~~~~p~~~---~~~~~~li~~~l~~dp~~R~~~~  274 (340)
T PTZ00426        211 WWTLGIFIYEILVGCPPFYANEPL--LIYQKIL---EG--------IIYFPKFL---DNNCKHLMKKLLSHDLTKRYGNL  274 (340)
T ss_pred             ccchhhHHHHHhcCCCCCCCCCHH--HHHHHHh---cC--------CCCCCCCC---CHHHHHHHHHHcccCHHHcCCCC
Confidence            999999999999999999743211  1111000   00        01122222   23567788899999999995   


Q ss_pred             --CHHHHHHH
Q 047677          158 --TMRSVVQM  165 (200)
Q Consensus       158 --t~~~il~~  165 (200)
                        +++++++.
T Consensus       275 ~~~~~~~~~h  284 (340)
T PTZ00426        275 KKGAQNVKEH  284 (340)
T ss_pred             CCCHHHHHcC
Confidence              78887654


No 171
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94  E-value=3.7e-27  Score=174.95  Aligned_cols=148  Identities=25%  Similarity=0.366  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||+|+||+++.++.++|+|||++........ .......++..|++||+..+..++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D  176 (250)
T cd05085         101 DAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQIPIKWTAPEALNYGRYSSESD  176 (250)
T ss_pred             HHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCCcccccCHHHhccCCCCchhH
Confidence            5788999999   89999999999999999999999999999865432211 1111112356799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||......  .......    .      ......+   ......+.+++.+||+.+|++||++
T Consensus       177 i~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~----~------~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~  241 (250)
T cd05085         177 VWSYGILLWETFSLGVCPYPGMTNQ--QAREQVE----K------GYRMSCP---QKCPDDVYKVMQRCWDYKPENRPKF  241 (250)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHH----c------CCCCCCC---CCCCHHHHHHHHHHcccCcccCCCH
Confidence            9999999999998 88998643211  1111000    0      0011111   1223478889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|.
T Consensus       242 ~~l~~~l~  249 (250)
T cd05085         242 SELQKELA  249 (250)
T ss_pred             HHHHHHhc
Confidence            99999875


No 172
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94  E-value=3.1e-28  Score=187.88  Aligned_cols=144  Identities=26%  Similarity=0.353  Sum_probs=104.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+. .++.++
T Consensus       104 qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~  178 (330)
T cd05586         104 ELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHV  178 (330)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCcc
Confidence            6889999999   899999999999999999999999999998653322211  1223478999999988654 478899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC--
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP--  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  157 (200)
                      |+|||||++|+|++|..||......  .....+.   ..        ...++.  ......+.+++.+||..||.+||  
T Consensus       179 DvwslGvil~elltG~~Pf~~~~~~--~~~~~i~---~~--------~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         179 DFWSLGVLVFEMCCGWSPFYAEDTQ--QMYRNIA---FG--------KVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             ceeccccEEEEeccCCCCCCCCCHH--HHHHHHH---cC--------CCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence            9999999999999999999653211  1111000   00        011111  11234667889999999999998  


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.++++
T Consensus       244 ~~~~~~ll~  252 (330)
T cd05586         244 HRDAVELKE  252 (330)
T ss_pred             CCCHHHHhc
Confidence              5666654


No 173
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=2.5e-27  Score=188.33  Aligned_cols=137  Identities=28%  Similarity=0.428  Sum_probs=107.6

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+-||.|||   ++||||||||.+||+++..|.+||+|||+++.....+.  ......||+.|+|||++....|+..+|.
T Consensus       477 v~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDW  551 (694)
T KOG0694|consen  477 VVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDW  551 (694)
T ss_pred             HHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCCCCC--ccccccCChhhcChhhhccCcccchhhH
Confidence            567999999   89999999999999999999999999999987654333  3334569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      ||||+++|+|+.|+.||.....+  ++..-+           ...+..+|...   +.+...++.++|..+|++|.-.
T Consensus       552 W~lGVLlyeML~Gq~PF~gddEe--e~FdsI-----------~~d~~~yP~~l---s~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  552 WGLGVLLYEMLVGESPFPGDDEE--EVFDSI-----------VNDEVRYPRFL---SKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHH--HHHHHH-----------hcCCCCCCCcc---cHHHHHHHHHHhccCcccccCC
Confidence            99999999999999999744321  111100           11223444443   3356678889999999999866


No 174
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94  E-value=4e-27  Score=176.69  Aligned_cols=153  Identities=26%  Similarity=0.350  Sum_probs=105.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-------   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-------   73 (200)
                      |++.|++|||   ++|++|+||||.||+++.++.++|+|||.+................++..|++||++...       
T Consensus       108 qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05087         108 EIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVV  184 (269)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcccccccccc
Confidence            5789999999   899999999999999999999999999988654322211111223356789999987532       


Q ss_pred             CCCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCC
Q 047677           74 KVDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  152 (200)
                      .++.++|+||||+++|++++ |..||.......  ......     .........+..   .......+.+++..|| .+
T Consensus       185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~l~~~c~-~~  253 (269)
T cd05087         185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYTV-----REQQLKLPKPRL---KLPLSDRWYEVMQFCW-LQ  253 (269)
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHh-----hcccCCCCCCcc---CCCCChHHHHHHHHHh-cC
Confidence            34678999999999999996 999996543221  111110     001111111111   1112335677888998 58


Q ss_pred             CCCCCCHHHHHHHHH
Q 047677          153 PALRPTMRSVVQMLE  167 (200)
Q Consensus       153 p~~Rpt~~~il~~L~  167 (200)
                      |++|||+.+++..|+
T Consensus       254 P~~Rpt~~~l~~~l~  268 (269)
T cd05087         254 PEQRPSAEEVHLLLS  268 (269)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999998875


No 175
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.94  E-value=8.8e-28  Score=186.66  Aligned_cols=149  Identities=25%  Similarity=0.339  Sum_probs=109.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCC---------------------------Ccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNG---------------------------GKD   53 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~---------------------------~~~   53 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++.......                           ...
T Consensus       109 qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
T cd05573         109 ELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV  185 (350)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccc
Confidence            6889999999   8999999999999999999999999999987654332                           001


Q ss_pred             eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc
Q 047677           54 TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET  133 (200)
Q Consensus        54 ~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (200)
                      ......|+..|+|||++.+..++.++|+|||||++|+|++|..||......  .....+.   ....      ....+..
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--~~~~~i~---~~~~------~~~~p~~  254 (350)
T cd05573         186 RANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ--ETYNKII---NWKE------SLRFPPD  254 (350)
T ss_pred             cccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH--HHHHHHh---ccCC------cccCCCC
Confidence            112245889999999999888999999999999999999999999754311  1110000   0000      0011111


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPT-MRSVVQM  165 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt-~~~il~~  165 (200)
                      . .....+.+++.+|+. ||.+||+ +.++++.
T Consensus       255 ~-~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         255 P-PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             C-CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            1 134567788899997 9999999 9999874


No 176
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94  E-value=2.9e-27  Score=177.09  Aligned_cols=146  Identities=28%  Similarity=0.466  Sum_probs=108.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc----eeeeecccccccccccccCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD----TTHVIAGTTGYIAPEYGYTSKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~   76 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++|+|||.+..........    ......++..|++||...+..++
T Consensus       114 ~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  190 (267)
T cd06628         114 QILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYT  190 (267)
T ss_pred             HHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCC
Confidence            5789999999   8999999999999999999999999999987664321111    11123367889999999888888


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      .++|+||+||++|++++|..||....... ..              ........+.........+.+++.+||+.||.+|
T Consensus       191 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  255 (267)
T cd06628         191 RKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AI--------------FKIGENASPEIPSNISSEAIDFLEKTFEIDHNKR  255 (267)
T ss_pred             chhhhHHHHHHHHHHhhCCCCCCCccHHH-HH--------------HHHhccCCCcCCcccCHHHHHHHHHHccCCchhC
Confidence            99999999999999999999997532211 00              0000111112222334577889999999999999


Q ss_pred             CCHHHHHH
Q 047677          157 PTMRSVVQ  164 (200)
Q Consensus       157 pt~~~il~  164 (200)
                      |++.++++
T Consensus       256 p~~~~il~  263 (267)
T cd06628         256 PTAAELLK  263 (267)
T ss_pred             cCHHHHhh
Confidence            99999875


No 177
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94  E-value=3e-27  Score=176.46  Aligned_cols=149  Identities=32%  Similarity=0.478  Sum_probs=110.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|++|||   ++|++|+||+|+||+++.++.++|+|||.+........ ........+..|++||...+..++.++|
T Consensus       111 ~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~D  186 (261)
T cd05034         111 QIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh-hhhhccCCCccccCHHHhccCCcCchhH
Confidence            5789999999   88999999999999999999999999999876543211 1111122356799999998888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|+++|++++ |..||.....  ........   .       ......   .......+.+++.+||..+|++||++
T Consensus       187 i~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~---~-------~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         187 VWSFGILLTEIVTYGRVPYPGMTN--REVLEQVE---R-------GYRMPR---PPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---c-------CCCCCC---CCCCCHHHHHHHHHHcccCcccCCCH
Confidence            9999999999998 8999864321  11111110   0       000111   11123468889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      +++++.|+.
T Consensus       252 ~~l~~~l~~  260 (261)
T cd05034         252 EYLQSFLED  260 (261)
T ss_pred             HHHHHHHhc
Confidence            999999875


No 178
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.94  E-value=4.3e-27  Score=175.22  Aligned_cols=145  Identities=30%  Similarity=0.471  Sum_probs=109.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||.+........     ....+..|++||......++.++|
T Consensus       110 qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~D  181 (256)
T cd05039         110 DVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHH
Confidence            5789999999   89999999999999999999999999999876532211     122356799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........    ..      .....+   ......+.+++.+||..+|.+|||+
T Consensus       182 i~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~----~~------~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~  246 (256)
T cd05039         182 VWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVE----KG------YRMEAP---EGCPPEVYKVMKDCWELDPAKRPTF  246 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHh----cC------CCCCCc---cCCCHHHHHHHHHHhccChhhCcCH
Confidence            9999999999997 9999864421  11111110    00      001111   1223567889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|+.
T Consensus       247 ~~l~~~l~~  255 (256)
T cd05039         247 KQLREQLAL  255 (256)
T ss_pred             HHHHHHHhc
Confidence            999999975


No 179
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=1.6e-27  Score=182.59  Aligned_cols=147  Identities=24%  Similarity=0.384  Sum_probs=109.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc---eeeeecccccccccccccCCC---
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD---TTHVIAGTTGYIAPEYGYTSK---   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~---   74 (200)
                      |++.||+|||   .+||+||||||.|+|++.+|++|++|||.+..........   ......||+.|+|||...+..   
T Consensus       218 Dvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~  294 (576)
T KOG0585|consen  218 DVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFS  294 (576)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCcc
Confidence            4788999999   8999999999999999999999999999987663321111   122256999999999887633   


Q ss_pred             -CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCC-CchHHHHHHHHHHHHHhcCCC
Q 047677           75 -VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIP-ETFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        75 -~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~d  152 (200)
                       .+.+.||||+|+++|-++.|+.||.....    +           ....++++..+. +...+..+.+.+++.+||..|
T Consensus       295 ~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~-----------~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~Kd  359 (576)
T KOG0585|consen  295 YSGFALDIWALGVTLYCLLFGQLPFFDDFE----L-----------ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKD  359 (576)
T ss_pred             ccchhhhhhhhhhhHHHhhhccCCcccchH----H-----------HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcC
Confidence             35778999999999999999999964321    1           111122222221 112244567788999999999


Q ss_pred             CCCCCCHHHHHHH
Q 047677          153 PALRPTMRSVVQM  165 (200)
Q Consensus       153 p~~Rpt~~~il~~  165 (200)
                      |++|.++.+|...
T Consensus       360 P~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  360 PEQRITLPDIKLH  372 (576)
T ss_pred             hhheeehhhheec
Confidence            9999999988544


No 180
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94  E-value=5.9e-27  Score=175.71  Aligned_cols=151  Identities=25%  Similarity=0.444  Sum_probs=109.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeec---ccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIA---GTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~---~~~~~~~pE~~~~~~~~~   77 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++++|||++................   .+..|++||...+..++.
T Consensus       114 ~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (269)
T cd05065         114 GIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTS  190 (269)
T ss_pred             HHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccc
Confidence            5789999999   8999999999999999999999999999886554322111111111   134699999998888899


Q ss_pred             ccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ++|+|||||++|++++ |..||.....  ......+.   .       ..  ..+ ........+.+++.+||..+|.+|
T Consensus       191 ~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~---~-------~~--~~~-~~~~~~~~~~~li~~~l~~~p~~R  255 (269)
T cd05065         191 ASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIE---Q-------DY--RLP-PPMDCPTALHQLMLDCWQKDRNAR  255 (269)
T ss_pred             hhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHH---c-------CC--cCC-CcccCCHHHHHHHHHHcCCChhhC
Confidence            9999999999999886 9999864321  11111111   0       00  000 111223467789999999999999


Q ss_pred             CCHHHHHHHHHhh
Q 047677          157 PTMRSVVQMLEEA  169 (200)
Q Consensus       157 pt~~~il~~L~~~  169 (200)
                      |++.+++..|+++
T Consensus       256 p~~~~i~~~l~~~  268 (269)
T cd05065         256 PKFGQIVSTLDKM  268 (269)
T ss_pred             cCHHHHHHHHHhh
Confidence            9999999999875


No 181
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94  E-value=1.4e-27  Score=179.87  Aligned_cols=96  Identities=39%  Similarity=0.663  Sum_probs=83.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC------CCeeecccccceeeccCCCcceeeeecccccccccccccCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF------LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~   74 (200)
                      |++.||++||   +++||||||||+|||++..      -.+||+|||+++.+....   ......|++.|||||++....
T Consensus       117 QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~  190 (429)
T KOG0595|consen  117 QLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQ  190 (429)
T ss_pred             HHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhcc
Confidence            7899999999   8999999999999999764      457999999998876432   222345899999999999999


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEY  102 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~  102 (200)
                      |+.|+|+||+|+++|++++|..||+...
T Consensus       191 YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  191 YDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            9999999999999999999999998543


No 182
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94  E-value=5.4e-27  Score=175.19  Aligned_cols=148  Identities=23%  Similarity=0.339  Sum_probs=108.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-eeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   +.|++|+||+|.||+++.++.++|+|||.+........... .....++..|+|||...+..++.++
T Consensus       112 ~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (263)
T cd06625         112 QILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKA  188 (263)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchh
Confidence            5789999999   89999999999999999999999999999876533211111 0123467789999999888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||+|+++|++++|..||........ .   .. ...      .......   +......+.+++.+||..+|.+|||+
T Consensus       189 Di~slG~il~el~~g~~p~~~~~~~~~-~---~~-~~~------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~  254 (263)
T cd06625         189 DVWSVGCTVVEMLTEKPPWAEFEAMAA-I---FK-IAT------QPTNPQL---PSHVSPDARNFLRRTFVENAKKRPSA  254 (263)
T ss_pred             hhHHHHHHHHHHHhCCCCccccchHHH-H---HH-Hhc------cCCCCCC---CccCCHHHHHHHHHHhhcCcccCCCH
Confidence            999999999999999999864321110 0   00 000      0001111   22233467789999999999999999


Q ss_pred             HHHHHH
Q 047677          160 RSVVQM  165 (200)
Q Consensus       160 ~~il~~  165 (200)
                      .++++.
T Consensus       255 ~~ll~~  260 (263)
T cd06625         255 EELLRH  260 (263)
T ss_pred             HHHhhC
Confidence            999864


No 183
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94  E-value=5.2e-28  Score=186.30  Aligned_cols=141  Identities=25%  Similarity=0.320  Sum_probs=104.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       104 qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05604         104 EIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--CcccccCChhhCCHHHHcCCCCCCcCc
Confidence            6889999999   89999999999999999999999999999865322211  122345789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|+|++|..||......  .....+   ...        ....+.   .....+.+++.+|+..+|.+||++.
T Consensus       179 vwslG~il~el~~G~~pf~~~~~~--~~~~~~---~~~--------~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         179 WWCLGAVLYEMLYGLPPFYCRDVA--EMYDNI---LHK--------PLVLRP---GASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             cccccceehhhhcCCCCCCCCCHH--HHHHHH---HcC--------CccCCC---CCCHHHHHHHHHHhccCHHhcCCCC
Confidence            999999999999999999743211  111110   000        001111   1234567889999999999999886


Q ss_pred             HH
Q 047677          161 SV  162 (200)
Q Consensus       161 ~i  162 (200)
                      +.
T Consensus       243 ~~  244 (325)
T cd05604         243 ED  244 (325)
T ss_pred             CC
Confidence            43


No 184
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=5.2e-27  Score=178.55  Aligned_cols=147  Identities=24%  Similarity=0.381  Sum_probs=108.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   +.|++|+||||.||+++.++.++|+|||++.........  .....+++.|++||.+.+..++.++|
T Consensus       124 ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  198 (296)
T cd06654         124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  198 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc--cCcccCCccccCHHHHcCCCCCccch
Confidence            5789999999   899999999999999999999999999987654322111  11234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||........ ... .  ...         ..............+.+++.+||..||++|||+.
T Consensus       199 v~s~Gvil~~l~~g~~pf~~~~~~~~-~~~-~--~~~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  265 (296)
T cd06654         199 IWSLGIMAIEMIEGEPPYLNENPLRA-LYL-I--ATN---------GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK  265 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHh-HHH-H--hcC---------CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHH
Confidence            99999999999999999965432111 000 0  000         0000011222334677899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       266 eil~~  270 (296)
T cd06654         266 ELLQH  270 (296)
T ss_pred             HHhhC
Confidence            99873


No 185
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94  E-value=7.8e-27  Score=174.95  Aligned_cols=151  Identities=25%  Similarity=0.422  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCccee-eeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTT-HVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~-~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++++|||.+............ .....+..|++||.+.+..++.++
T Consensus       114 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~  190 (267)
T cd05066         114 GIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS  190 (267)
T ss_pred             HHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchh
Confidence            5789999999   899999999999999999999999999998765432211111 011124579999999888889999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|++++ |..||......  .....+.   .          ....+........+.+++.+||+.+|.+||+
T Consensus       191 Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~---~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  255 (267)
T cd05066         191 DVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIE---E----------GYRLPAPMDCPAALHQLMLDCWQKDRNERPK  255 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHh---C----------CCcCCCCCCCCHHHHHHHHHHcccCchhCCC
Confidence            99999999999886 99998643221  1111111   0          0001111122346788999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++++.|+++
T Consensus       256 ~~~i~~~l~~~  266 (267)
T cd05066         256 FEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875


No 186
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94  E-value=4.7e-27  Score=179.75  Aligned_cols=158  Identities=21%  Similarity=0.242  Sum_probs=107.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......++..|+|||.+.+ ..++.++
T Consensus       112 qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  186 (309)
T cd07872         112 QILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQI  186 (309)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHH
Confidence            5789999999   89999999999999999999999999999865432211  1112236788999998765 3578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc----------ccchhhhhccCCCCC-----chHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN----------SKQSVLTLVDSSIPE-----TFKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-----~~~~~~~~~~~l  144 (200)
                      |+|||||++|++++|..||......+. ..........          ..........+....     ........+.++
T Consensus       187 DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  265 (309)
T cd07872         187 DMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIEL  265 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHH
Confidence            999999999999999999975432211 1111000000          000000000000000     011223467789


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||+.||.+|||+.++++
T Consensus       266 i~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         266 LTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HHHhccCChhhCCCHHHHhc
Confidence            99999999999999999986


No 187
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=4.1e-27  Score=176.61  Aligned_cols=153  Identities=26%  Similarity=0.353  Sum_probs=103.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-------C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-------S   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-------~   73 (200)
                      |++.||+|||   ++|++||||||.||+++.++.++|+|||++................++..|+|||+...       .
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05042         108 EVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPK  184 (269)
T ss_pred             HHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccccccc
Confidence            5789999999   89999999999999999999999999998864332211111122234567999998643       3


Q ss_pred             CCCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCC
Q 047677           74 KVDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  152 (200)
                      .++.++|+|||||++|++++ |..||.......  ......   .  ........+..   .......+..++..|| .|
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~---~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~d  253 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQVV---R--EQDIKLPKPQL---DLKYSDRWYEVMQFCW-LD  253 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHh---h--ccCccCCCCcc---cccCCHHHHHHHHHHh-cC
Confidence            45778999999999999999 777876432211  111100   0  00001111111   1223345566777888 59


Q ss_pred             CCCCCCHHHHHHHHH
Q 047677          153 PALRPTMRSVVQMLE  167 (200)
Q Consensus       153 p~~Rpt~~~il~~L~  167 (200)
                      |++|||++++++.|.
T Consensus       254 p~~Rpt~~~v~~~l~  268 (269)
T cd05042         254 PETRPTAEEVHELLT  268 (269)
T ss_pred             cccccCHHHHHHHhc
Confidence            999999999999874


No 188
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94  E-value=6.5e-27  Score=176.74  Aligned_cols=159  Identities=22%  Similarity=0.273  Sum_probs=107.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      ||++||.|||   ++|++|+||||.||+++.++.++|+|||++........  ......++..|+|||.+.+.. ++.++
T Consensus       107 qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  181 (284)
T cd07839         107 QLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSI  181 (284)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHH
Confidence            6899999999   89999999999999999999999999999875432211  111223578899999876644 68899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccch----hhh----hccCCCCC------chHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQS----VLT----LVDSSIPE------TFKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~------~~~~~~~~~~~li  145 (200)
                      |+|||||++|+|++|..|+.......................    ...    ......+.      ........+.+++
T Consensus       182 DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  261 (284)
T cd07839         182 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLL  261 (284)
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHH
Confidence            999999999999999988754333222221111100000000    000    00000110      0112335677899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||+.||.+|||+++++.
T Consensus       262 ~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         262 QNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHhcCChhhcCCHHHHhc
Confidence            9999999999999999875


No 189
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94  E-value=1.2e-27  Score=184.70  Aligned_cols=147  Identities=23%  Similarity=0.307  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc------CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY------TSK   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~------~~~   74 (200)
                      |+++||.|||   ++|++||||||+||+++.++.++|+|||++......... ......+++.|+|||++.      ...
T Consensus       110 qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (330)
T cd05601         110 ELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGT  185 (330)
T ss_pred             HHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCC
Confidence            6789999999   899999999999999999999999999999765433221 222235789999999876      345


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      ++.++|+|||||++|+|++|..||.......  ....+.   .. ..     ....+. .......+.+++.+|+. +|.
T Consensus       186 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~~i~---~~-~~-----~~~~~~-~~~~~~~~~~li~~ll~-~p~  252 (330)
T cd05601         186 YGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--TYNNIM---NF-QR-----FLKFPE-DPKVSSDFLDLIQSLLC-GQK  252 (330)
T ss_pred             CCCcceeecccceeeeeccCCCCCCCCCHHH--HHHHHH---cC-CC-----ccCCCC-CCCCCHHHHHHHHHHcc-Chh
Confidence            6789999999999999999999996432211  100000   00 00     001111 11223467788889997 999


Q ss_pred             CCCCHHHHHH
Q 047677          155 LRPTMRSVVQ  164 (200)
Q Consensus       155 ~Rpt~~~il~  164 (200)
                      +|||+.+++.
T Consensus       253 ~R~t~~~l~~  262 (330)
T cd05601         253 ERLGYEGLCC  262 (330)
T ss_pred             hCCCHHHHhC
Confidence            9999999875


No 190
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=3.8e-27  Score=178.38  Aligned_cols=147  Identities=28%  Similarity=0.362  Sum_probs=108.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++........   .....++..|++||.+.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05605         110 EITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCcccc
Confidence            6889999999   89999999999999999999999999999876543221   11234788999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +||+||++|++++|..||........  ...+.          ..+..............+.+++.+||+.||++||   
T Consensus       184 iws~G~~l~el~~g~~pf~~~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05605         184 WWGLGCLIYEMIEGKSPFRQRKEKVK--REEVE----------RRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCR  251 (285)
T ss_pred             chhHHHHHHHHHHCCCCCCCCchhhH--HHHHH----------HHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCC
Confidence            99999999999999999975332110  00000          0000111111222344678899999999999999   


Q ss_pred             --CHHHHHHH
Q 047677          158 --TMRSVVQM  165 (200)
Q Consensus       158 --t~~~il~~  165 (200)
                        ++.+++..
T Consensus       252 ~~~~~~l~~~  261 (285)
T cd05605         252 GEGAEEVKAH  261 (285)
T ss_pred             CCCHHHHhcC
Confidence              77777553


No 191
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94  E-value=9.3e-27  Score=173.25  Aligned_cols=147  Identities=31%  Similarity=0.486  Sum_probs=108.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|+||+++.++.++|+|||++............ ...++..|++||...+..++.++|
T Consensus       111 ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~D  186 (258)
T smart00219      111 QIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSD  186 (258)
T ss_pred             HHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchh
Confidence            5789999999   899999999999999999999999999998766543221111 122567899999987788899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|++++++++ |..||....  .........             ..............+.+++.+||..||.+|||+
T Consensus       187 i~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (258)
T smart00219      187 VWSFGVLLWEIFTLGESPYPGMS--NEEVLEYLK-------------KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTF  251 (258)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh-------------cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCH
Confidence            9999999999998 778876421  111111111             011111112234578889999999999999999


Q ss_pred             HHHHHHH
Q 047677          160 RSVVQML  166 (200)
Q Consensus       160 ~~il~~L  166 (200)
                      .++++.|
T Consensus       252 ~~ll~~l  258 (258)
T smart00219      252 SELVEIL  258 (258)
T ss_pred             HHHHhhC
Confidence            9998764


No 192
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.94  E-value=9.1e-27  Score=174.27  Aligned_cols=141  Identities=24%  Similarity=0.396  Sum_probs=102.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCC-------eeecccccceeeccCCCcceeeeeccccccccccccc-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLK-------PRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-T   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~-------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-~   72 (200)
                      |+++||+|||   ++|++||||||.||+++.++.       ++++|||++.......      ...++..|+|||.+. +
T Consensus       113 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~  183 (262)
T cd05077         113 QLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ------ECVERIPWIAPECVEDS  183 (262)
T ss_pred             HHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc------cccccccccChhhhcCC
Confidence            6899999999   899999999999999976554       7899999886543221      123577899999876 4


Q ss_pred             CCCCCccchhhHhHHHHHHH-hCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCC
Q 047677           73 SKVDEKSDVYSFGVVLMELV-TGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTT  151 (200)
Q Consensus        73 ~~~~~~~Di~slG~~~~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  151 (200)
                      ..++.++|+|||||++|+++ .|..||........  ...    ..          .... ...+....+.+++.+||+.
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~----~~----------~~~~-~~~~~~~~~~~li~~cl~~  246 (262)
T cd05077         184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--ERF----YE----------GQCM-LVTPSCKELADLMTHCMNY  246 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--HHH----Hh----------cCcc-CCCCChHHHHHHHHHHcCC
Confidence            56788999999999999998 47777754321110  000    00          0000 0111234678899999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 047677          152 QPALRPTMRSVVQMLE  167 (200)
Q Consensus       152 dp~~Rpt~~~il~~L~  167 (200)
                      ||.+||++.++++.|+
T Consensus       247 dp~~Rp~~~~il~~~~  262 (262)
T cd05077         247 DPNQRPFFRAIMRDIN  262 (262)
T ss_pred             ChhhCcCHHHHHHhcC
Confidence            9999999999998763


No 193
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94  E-value=8.6e-27  Score=176.01  Aligned_cols=147  Identities=24%  Similarity=0.327  Sum_probs=105.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |+++||+|||   +.|++|+||||+||+++.++.++|+|||++........  ......++..|++||++.     +..+
T Consensus       111 qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (282)
T cd06643         111 QTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETSKDRPY  185 (282)
T ss_pred             HHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccc--ccccccccccccCHhhccccCCCCCCC
Confidence            5889999999   89999999999999999999999999999865433211  112234788999999874     3346


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||+||++|++++|..||...... .......    ..       ..... ..+......+.+++.+||+.||.+
T Consensus       186 ~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~----~~-------~~~~~-~~~~~~~~~~~~li~~~l~~~p~~  252 (282)
T cd06643         186 DYKADVWSLGITLIEMAQIEPPHHELNPM-RVLLKIA----KS-------EPPTL-AQPSRWSSEFKDFLKKCLEKNVDA  252 (282)
T ss_pred             CccchhhhHHHHHHHHccCCCCccccCHH-HHHHHHh----hc-------CCCCC-CCccccCHHHHHHHHHHccCChhh
Confidence            78899999999999999999998643211 1111100    00       00010 011122346788999999999999


Q ss_pred             CCCHHHHHHH
Q 047677          156 RPTMRSVVQM  165 (200)
Q Consensus       156 Rpt~~~il~~  165 (200)
                      |||+.++++.
T Consensus       253 Rp~~~~il~~  262 (282)
T cd06643         253 RWTTTQLLQH  262 (282)
T ss_pred             CcCHHHHhcC
Confidence            9999988643


No 194
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94  E-value=9.2e-27  Score=174.64  Aligned_cols=147  Identities=27%  Similarity=0.418  Sum_probs=110.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||.  ..|++|+||+|.||+++.++.++|+|||.+.......   ......++..|++||...+..++.++|
T Consensus       121 ~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D  195 (269)
T cd08528         121 QMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKAD  195 (269)
T ss_pred             HHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHH
Confidence            57889999993  3689999999999999999999999999987654332   222344788899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCC-chHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPE-TFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++|..||.....  ......+.             ...... ........+.+++.+||+.||++||++
T Consensus       196 v~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  260 (269)
T cd08528         196 VWAFGCILYQMCTLQPPFYSTNM--LSLATKIV-------------EAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDI  260 (269)
T ss_pred             HHHHHHHHHHHHhCCCcccccCH--HHHHHHHh-------------hccCCcCCcccCCHHHHHHHHHHCCCCCccCCCH
Confidence            99999999999999999864321  11111100             011111 111223467889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++.+++.
T Consensus       261 ~e~~~~~~  268 (269)
T cd08528         261 IQVSAMIS  268 (269)
T ss_pred             HHHHHHhc
Confidence            99999875


No 195
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.94  E-value=5.3e-27  Score=176.15  Aligned_cols=145  Identities=26%  Similarity=0.392  Sum_probs=105.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|++||++.     ...+
T Consensus       119 qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~  193 (272)
T cd06637         119 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATY  193 (272)
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCC
Confidence            6889999999   78999999999999999999999999999876533211  112234788899999875     2347


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||+||++|++++|..||..........    .  ...      ......  ........+.+++.+||..+|.+
T Consensus       194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~--~~~------~~~~~~--~~~~~~~~~~~li~~~l~~~p~~  259 (272)
T cd06637         194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----L--IPR------NPAPRL--KSKKWSKKFQSFIESCLVKNHSQ  259 (272)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----H--Hhc------CCCCCC--CCCCcCHHHHHHHHHHcCCChhh
Confidence            789999999999999999999996432111110    0  000      000000  01112346788999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.++++
T Consensus       260 Rpt~~~il~  268 (272)
T cd06637         260 RPTTEQLMK  268 (272)
T ss_pred             CCCHHHHhh
Confidence            999999875


No 196
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.94  E-value=1e-26  Score=184.15  Aligned_cols=92  Identities=29%  Similarity=0.385  Sum_probs=78.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC--CCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE--FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~   78 (200)
                      ||+.||.+||   +.||||+||||+|||+..  ...+||+|||++.+....-    . .-+.+..|.|||++.+..|+.+
T Consensus       297 Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----y-tYiQSRfYRAPEVILGlpY~~~  368 (586)
T KOG0667|consen  297 QILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----Y-TYIQSRFYRAPEVILGLPYDTA  368 (586)
T ss_pred             HHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc----e-eeeeccccccchhhccCCCCCc
Confidence            6899999999   899999999999999954  3468999999986654321    1 3346788999999999999999


Q ss_pred             cchhhHhHHHHHHHhCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEP  100 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~  100 (200)
                      .|+|||||++.||++|.+.|..
T Consensus       369 IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  369 IDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             cceeehhhhHHhHhcCccccCC
Confidence            9999999999999999777754


No 197
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=6.3e-27  Score=175.34  Aligned_cols=149  Identities=23%  Similarity=0.361  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |+++||.|||   ++|++|+||+|.||+++.++.++|+|||++.........  .....++..|++||.+.   ...++.
T Consensus       114 qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~  188 (267)
T cd06646         114 ETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK--RKSFIGTPYWMAPEVAAVEKNGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccccc--cCccccCccccCHhHcccccCCCCcc
Confidence            6789999999   899999999999999999999999999998765432211  11234678899999874   334678


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||+||++|++++|..||.........        .....   .................+.+++.+||..+|++||
T Consensus       189 ~~Dvws~G~il~el~~g~~p~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  257 (267)
T cd06646         189 LCDIWAVGITAIELAELQPPMFDLHPMRAL--------FLMSK---SNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRP  257 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccchhhhh--------eeeec---CCCCCCCCccccccCHHHHHHHHHHhhCChhhCc
Confidence            899999999999999999998643211100        00000   0000000111122335788899999999999999


Q ss_pred             CHHHHHHH
Q 047677          158 TMRSVVQM  165 (200)
Q Consensus       158 t~~~il~~  165 (200)
                      |++++++.
T Consensus       258 ~~~~il~~  265 (267)
T cd06646         258 TAERLLTH  265 (267)
T ss_pred             CHHHHhcC
Confidence            99999864


No 198
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94  E-value=4e-27  Score=177.67  Aligned_cols=165  Identities=27%  Similarity=0.365  Sum_probs=112.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-eeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||.+........... .....++..|++||...+..++.++
T Consensus       117 ~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  193 (284)
T cd05038         117 QICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSAS  193 (284)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCccc
Confidence            5789999999   89999999999999999999999999999876653221111 1111234569999998888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC-CCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI-PETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||++++++++|..|+.............. ............+.... ..........+.+++.+||+.+|++|||
T Consensus       194 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  272 (284)
T cd05038         194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA-QGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPS  272 (284)
T ss_pred             chHHHhhhhheeeccCCCcccccchhccccccc-cccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCC
Confidence            999999999999999998865322210000000 00000000000110000 0011122356888999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.+++++|+++
T Consensus       273 ~~ei~~~l~~i  283 (284)
T cd05038         273 FADLILIVDRL  283 (284)
T ss_pred             HHHHHHHHhhc
Confidence            99999999875


No 199
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.94  E-value=5.1e-27  Score=183.92  Aligned_cols=159  Identities=21%  Similarity=0.332  Sum_probs=108.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++......... ......++..|+|||.+.+. .++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~  186 (372)
T cd07853         111 QILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAV  186 (372)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHH
Confidence            6889999999   899999999999999999999999999998765432111 11122467889999998764 478899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc----------cchhhhhcc-CCCCC-------chHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS----------KQSVLTLVD-SSIPE-------TFKENAVEI  141 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~-------~~~~~~~~~  141 (200)
                      |+||+||++|+|++|..||.......  ....+......          ......... ...+.       ........+
T Consensus       187 DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (372)
T cd07853         187 DIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEA  264 (372)
T ss_pred             HHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHH
Confidence            99999999999999999997543211  11110000000          000000000 00000       011224567


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+++.+||+.||.+|||+.++++.
T Consensus       265 ~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         265 VHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHHhCCCChhhCcCHHHHhcC
Confidence            889999999999999999999863


No 200
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.94  E-value=8.1e-27  Score=169.92  Aligned_cols=147  Identities=25%  Similarity=0.353  Sum_probs=113.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeC---CCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLD---EFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~   77 (200)
                      ||+.|+.|||   +++|.||||||+|+|..   .+..+||+|||+++....+....++.   .|+.|.|||++-..+|..
T Consensus       169 qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc---~TPyYvaPevlg~eKydk  242 (400)
T KOG0604|consen  169 QIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPC---FTPYYVAPEVLGPEKYDK  242 (400)
T ss_pred             HHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCc---ccccccCHHHhCchhcCC
Confidence            5889999999   89999999999999995   46778999999998766544333332   489999999998888999


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhh-hhccCCC--C-CchHHHHHHHHHHHHHhcCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVL-TLVDSSI--P-ETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ..|+||+|+++|-+++|.+||++..+..-+            .... .+....+  | +.+...++...++++.+|..+|
T Consensus       243 scdmwSlgVimYIlLCGyPPFYS~hg~ais------------pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~P  310 (400)
T KOG0604|consen  243 SCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEP  310 (400)
T ss_pred             CCCccchhHHHHHhhcCCCcccccCCccCC------------hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999875443111            1111 1111111  2 2366667777889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047677          154 ALRPTMRSVVQM  165 (200)
Q Consensus       154 ~~Rpt~~~il~~  165 (200)
                      .+|.|++++++.
T Consensus       311 teRlTI~~~m~h  322 (400)
T KOG0604|consen  311 TERLTIEEVMDH  322 (400)
T ss_pred             hhheeHHHhhcC
Confidence            999999998753


No 201
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=2.5e-26  Score=186.03  Aligned_cols=161  Identities=22%  Similarity=0.254  Sum_probs=108.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++..+...... ......|+..|++||++.+..++.++|
T Consensus       275 ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~D  350 (501)
T PHA03210        275 QLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITD  350 (501)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHH
Confidence            6889999999   899999999999999999999999999999766432211 112245899999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCC-CCCCCCC-chhHHHHHHHhhc-------ccchhhhhcc----CCCCCchH------HHHHHH
Q 047677           81 VYSFGVVLMELVTGKKP-IEPEYGE-NKDIVRWVCSHFN-------SKQSVLTLVD----SSIPETFK------ENAVEI  141 (200)
Q Consensus        81 i~slG~~~~~l~~g~~p-f~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~------~~~~~~  141 (200)
                      +|||||++|+|++|..+ |...... ...+...+.....       ........+.    ...+....      .....+
T Consensus       351 iwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  430 (501)
T PHA03210        351 IWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADF  430 (501)
T ss_pred             HHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHH
Confidence            99999999999998754 4322211 1122211110000       0000000000    00000000      112346


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+++.+||+.||.+|||+.|+++.
T Consensus       431 ~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        431 EYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHHHHHhccCcccCcCHHHHhhC
Confidence            678889999999999999999863


No 202
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.94  E-value=9.2e-27  Score=176.87  Aligned_cols=147  Identities=24%  Similarity=0.386  Sum_probs=108.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|+|||...+..++.++|
T Consensus       126 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  200 (292)
T cd06658         126 SVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVD  200 (292)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhh
Confidence            5789999999   78999999999999999999999999998865432211  112234788999999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||.......  ....+.          .......+ ........+.+++.+||..||.+|||+.
T Consensus       201 v~slGvil~el~~g~~p~~~~~~~~--~~~~~~----------~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~  267 (292)
T cd06658         201 IWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRIR----------DNLPPRVK-DSHKVSSVLRGFLDLMLVREPSQRATAQ  267 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH----------hcCCCccc-cccccCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999999999986432111  100000          00111111 1112334677889999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       268 ~il~~  272 (292)
T cd06658         268 ELLQH  272 (292)
T ss_pred             HHhhC
Confidence            99874


No 203
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94  E-value=8.5e-28  Score=184.58  Aligned_cols=140  Identities=28%  Similarity=0.393  Sum_probs=105.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|++||.+.+..++.++|
T Consensus       106 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~D  180 (318)
T cd05582         106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSAD  180 (318)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999875433211  122345789999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||.....  ......+.   .        .....+..   ....+.+++.+||+.||.+||++.
T Consensus       181 iwslG~il~el~tg~~p~~~~~~--~~~~~~i~---~--------~~~~~p~~---~~~~~~~li~~~l~~~P~~R~~a~  244 (318)
T cd05582         181 WWSFGVLMFEMLTGSLPFQGKDR--KETMTMIL---K--------AKLGMPQF---LSPEAQSLLRALFKRNPANRLGAG  244 (318)
T ss_pred             eeccceEeeeeccCCCCCCCCCH--HHHHHHHH---c--------CCCCCCCC---CCHHHHHHHHHHhhcCHhHcCCCC
Confidence            99999999999999999974321  11111110   0        00112222   234677889999999999999954


Q ss_pred             H
Q 047677          161 S  161 (200)
Q Consensus       161 ~  161 (200)
                      +
T Consensus       245 ~  245 (318)
T cd05582         245 P  245 (318)
T ss_pred             C
Confidence            4


No 204
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93  E-value=1.5e-26  Score=172.45  Aligned_cols=150  Identities=29%  Similarity=0.498  Sum_probs=108.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-CCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-TSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-~~~~~~~~   79 (200)
                      |+++||++||   ++|++|+||||+||+++.++.++|+|||.+......  ........++..|.|||... +...+.++
T Consensus       106 qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  180 (260)
T PF00069_consen  106 QILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN--NENFNPFVGTPEYMAPEVLQQGKKYTRKS  180 (260)
T ss_dssp             HHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST--TSEBSSSSSSGGGSCHHHHTTTSSBSTHH
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence            5789999999   789999999999999999999999999998764211  12222344788999999988 77788999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||+|++++++++|..||.....  ..............  ... ...    ........+.+++.+||+.||++|||+
T Consensus       181 Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~--~~~-~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~  251 (260)
T PF00069_consen  181 DIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKILKRP--LPS-SSQ----QSREKSEELRDLIKKMLSKDPEQRPSA  251 (260)
T ss_dssp             HHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHHHTH--HHH-HTT----SHTTSHHHHHHHHHHHSSSSGGGSTTH
T ss_pred             cccccccccccccccccccccccc--hhhhhhhhhccccc--ccc-ccc----ccchhHHHHHHHHHHHccCChhHCcCH
Confidence            999999999999999999975511  11111111000000  000 000    011112578899999999999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .++++
T Consensus       252 ~~l~~  256 (260)
T PF00069_consen  252 EELLK  256 (260)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99875


No 205
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.93  E-value=1.6e-26  Score=171.98  Aligned_cols=146  Identities=27%  Similarity=0.433  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||.+.+..++.++|
T Consensus       107 ~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~D  181 (256)
T cd06612         107 QTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKAD  181 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhh
Confidence            5789999999   88999999999999999999999999999876543321  122234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||..........  .+          ........ .........+.+++.+||+.||.+|||+.
T Consensus       182 i~s~G~il~~l~~g~~p~~~~~~~~~~~--~~----------~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~  248 (256)
T cd06612         182 IWSLGITAIEMAEGKPPYSDIHPMRAIF--MI----------PNKPPPTL-SDPEKWSPEFNDFVKKCLVKDPEERPSAI  248 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcchhhhhh--hh----------ccCCCCCC-CchhhcCHHHHHHHHHHHhcChhhCcCHH
Confidence            9999999999999999987432211100  00          00000010 11122334678899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       249 ~il~  252 (256)
T cd06612         249 QLLQ  252 (256)
T ss_pred             HHhc
Confidence            9875


No 206
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.93  E-value=1.9e-26  Score=178.21  Aligned_cols=95  Identities=34%  Similarity=0.609  Sum_probs=79.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||+  ..+++|+||||+||+++.++.++|+|||++.......    .....++..|+|||.+.+..++.++|
T Consensus       111 ~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D  184 (333)
T cd06650         111 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSD  184 (333)
T ss_pred             HHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHH
Confidence            57899999994  3579999999999999999999999999986543211    11234788999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPE  101 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~  101 (200)
                      +|||||++|++++|..||...
T Consensus       185 vwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         185 IWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             HHHHHHHHHHHHHCCCCCCCc
Confidence            999999999999999999754


No 207
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.93  E-value=6.3e-27  Score=183.20  Aligned_cols=149  Identities=25%  Similarity=0.347  Sum_probs=107.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC----CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS----KVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~----~~~   76 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++......... ......|++.|+|||++.+.    .++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  225 (370)
T cd05596         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCC
Confidence            6889999999   899999999999999999999999999998765432211 11224589999999987643    367


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC-
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL-  155 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~-  155 (200)
                      .++|+|||||++|++++|..||......  .....+   .....      ....+. .......+.+++.+||..+|.+ 
T Consensus       226 ~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i---~~~~~------~~~~~~-~~~~s~~~~~li~~~L~~~p~r~  293 (370)
T cd05596         226 RECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKI---MDHKN------SLTFPD-DIEISKQAKDLICAFLTDREVRL  293 (370)
T ss_pred             CceeeeehhHHHHHHHhCCCCcCCCCHH--HHHHHH---HcCCC------cCCCCC-cCCCCHHHHHHHHHHccChhhcc
Confidence            8999999999999999999999753211  110000   00000      011111 1123456778899999999988 


Q ss_pred             -CCCHHHHHHH
Q 047677          156 -RPTMRSVVQM  165 (200)
Q Consensus       156 -Rpt~~~il~~  165 (200)
                       |+|+.++++.
T Consensus       294 ~R~s~~ell~h  304 (370)
T cd05596         294 GRNGVDEIKSH  304 (370)
T ss_pred             CCCCHHHHhcC
Confidence             9999999654


No 208
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.93  E-value=5.6e-27  Score=180.45  Aligned_cols=138  Identities=30%  Similarity=0.465  Sum_probs=103.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05615         109 EISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccc
Confidence            5889999999   89999999999999999999999999999865332211  112234789999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+||++|++++|..||.....  ......+.   .        ....++..   ....+.+++.+||+.+|.+|++.
T Consensus       184 iwslGvil~elltG~~pf~~~~~--~~~~~~i~---~--------~~~~~p~~---~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         184 WWAYGVLLYEMLAGQPPFDGEDE--DELFQSIM---E--------HNVSYPKS---LSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH---h--------CCCCCCcc---CCHHHHHHHHHHcccCHhhCCCC
Confidence            99999999999999999975321  11111111   0        01112222   23467788999999999999985


No 209
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.93  E-value=7.5e-27  Score=176.43  Aligned_cols=158  Identities=23%  Similarity=0.238  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+. .++.++
T Consensus       109 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (285)
T cd07861         109 QILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPV  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHH
Confidence            6889999999   89999999999999999999999999999865432211  11112357889999987654 467889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc----------cchhhhhcc----CCCCCchHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS----------KQSVLTLVD----SSIPETFKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~~~~~~~~~~~li  145 (200)
                      |+|||||++|++++|..||............ .......          .........    ............++.+++
T Consensus       184 Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  262 (285)
T cd07861         184 DIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLL  262 (285)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHH
Confidence            9999999999999999999754322111110 0000000          000000000    000000111234677899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||..||.+|||+.++++
T Consensus       263 ~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         263 EKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHhcCChhhCCCHHHHhc
Confidence            9999999999999999875


No 210
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93  E-value=6.3e-26  Score=170.20  Aligned_cols=153  Identities=20%  Similarity=0.317  Sum_probs=103.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-------C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-------S   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-------~   73 (200)
                      |+++||+|||   +++++|+||||+||+++.++.++|+|||++................++..|++||+...       .
T Consensus       107 ~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (268)
T cd05086         107 EIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITA  183 (268)
T ss_pred             HHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccC
Confidence            5789999999   78999999999999999999999999998754322111111122346778999998643       2


Q ss_pred             CCCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCC
Q 047677           74 KVDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  152 (200)
                      .++.++|+||||+++|++++ +..||.....  ......+.   .  ........+..+..   ....+.+++..|| .+
T Consensus       184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~---~--~~~~~~~~~~~~~~---~~~~~~~l~~~c~-~~  252 (268)
T cd05086         184 EQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVI---K--DQQVKLFKPQLELP---YSERWYEVLQFCW-LS  252 (268)
T ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---h--hcccccCCCccCCC---CcHHHHHHHHHHh-hC
Confidence            34678999999999999997 4667754321  11111110   0  11111112222222   2345677888999 67


Q ss_pred             CCCCCCHHHHHHHHH
Q 047677          153 PALRPTMRSVVQMLE  167 (200)
Q Consensus       153 p~~Rpt~~~il~~L~  167 (200)
                      |++||+++++++.|.
T Consensus       253 P~~Rp~~~~i~~~l~  267 (268)
T cd05086         253 PEKRATAEEVHRLLT  267 (268)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999999875


No 211
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93  E-value=2.6e-26  Score=171.32  Aligned_cols=148  Identities=26%  Similarity=0.366  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC---CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS---KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~---~~~~   77 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++|+|||.+........  ......++..|++||...+.   .++.
T Consensus       109 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~  183 (262)
T cd06613         109 ETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--KRKSFIGTPYWMAPEVAAVERKGGYDG  183 (262)
T ss_pred             HHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--ccccccCCccccCchhhcccccCCcCc
Confidence            5789999999   89999999999999999999999999999866543211  11123467789999998766   7888


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||||+++|++++|..||.......... . .   ..      .................+.+++.+||..+|.+||
T Consensus       184 ~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~-~---~~------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (262)
T cd06613         184 KCDIWALGITAIELAELQPPMFDLHPMRALF-L-I---SK------SNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP  252 (262)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-H-H---Hh------ccCCCccccchhhhhHHHHHHHHHHcCCChhhCC
Confidence            9999999999999999999997533211100 0 0   00      0000111111223345788999999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      |+.+++.
T Consensus       253 t~~~il~  259 (262)
T cd06613         253 TATKLLQ  259 (262)
T ss_pred             CHHHHhc
Confidence            9999875


No 212
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93  E-value=1.4e-26  Score=174.14  Aligned_cols=145  Identities=30%  Similarity=0.465  Sum_probs=108.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|+.|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|++||...+..++.++|
T Consensus       106 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sD  180 (274)
T cd06609         106 EVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKAD  180 (274)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc--ccccccCCccccChhhhccCCCCchhh
Confidence            5789999999   89999999999999999999999999999877654321  112234677899999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||......  .....+.          ....+..+..  .....+.+++.+||..+|++|||++
T Consensus       181 v~slG~il~~l~tg~~p~~~~~~~--~~~~~~~----------~~~~~~~~~~--~~~~~~~~~l~~~l~~~p~~Rpt~~  246 (274)
T cd06609         181 IWSLGITAIELAKGEPPLSDLHPM--RVLFLIP----------KNNPPSLEGN--KFSKPFKDFVSLCLNKDPKERPSAK  246 (274)
T ss_pred             HHHHHHHHHHHHhCCCCcccCchH--HHHHHhh----------hcCCCCCccc--ccCHHHHHHHHHHhhCChhhCcCHH
Confidence            999999999999999999643211  1100000          0011111111  1334678899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       247 ~il~  250 (274)
T cd06609         247 ELLK  250 (274)
T ss_pred             HHhh
Confidence            9976


No 213
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=3.8e-27  Score=188.18  Aligned_cols=146  Identities=27%  Similarity=0.458  Sum_probs=114.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCC--CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS--KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~--~~~~   77 (200)
                      ||++||+|||   .+.|||||||-.||++.. +|.+|+.|||.++++-.  ..++...+.||.-|+|||++..+  +|..
T Consensus       683 QILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~  757 (1226)
T KOG4279|consen  683 QILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGK  757 (1226)
T ss_pred             HHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc--CCccccccccchhhhChHhhccCCcCCCc
Confidence            7899999999   788999999999999964 79999999999877642  22334445699999999998765  5899


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|||||||++.||.||++||........   .    +..      -.+-...|+.+.+...+...++.+|+..||.+||
T Consensus       758 aADIWS~GCT~vEMATGrPPF~ElgspqA---A----MFk------VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~  824 (1226)
T KOG4279|consen  758 AADIWSFGCTMVEMATGRPPFVELGSPQA---A----MFK------VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRP  824 (1226)
T ss_pred             hhhhhhccceeEeeccCCCCeeecCChhH---h----hhh------hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCc
Confidence            99999999999999999999975433210   0    000      1122344566666777888899999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      ++.++++
T Consensus       825 sA~~LL~  831 (1226)
T KOG4279|consen  825 SAKDLLQ  831 (1226)
T ss_pred             cHHHhcc
Confidence            9999875


No 214
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.93  E-value=2.1e-26  Score=173.49  Aligned_cols=145  Identities=29%  Similarity=0.447  Sum_probs=108.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++|+.|||   ++|++|+||+|+||+++.++.++++|||++........  ......++..|++||.+.+..++.++|
T Consensus       109 ~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (277)
T cd06642         109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKAD  183 (277)
T ss_pred             HHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcch--hhhcccCcccccCHHHhCcCCCchhhh
Confidence            5789999999   89999999999999999999999999999865543211  111234678899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||........  ...             ......+.........+.+++.+||+.+|++|||+.
T Consensus       184 v~slG~il~el~tg~~p~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06642         184 IWSLGITAIELAKGEPPNSDLHPMRV--LFL-------------IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAK  248 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCcccchhhH--Hhh-------------hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHH
Confidence            99999999999999999864322110  000             000011111122334678899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       249 ~il~~  253 (277)
T cd06642         249 ELLKH  253 (277)
T ss_pred             HHHHh
Confidence            99973


No 215
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93  E-value=1.1e-26  Score=176.76  Aligned_cols=147  Identities=23%  Similarity=0.370  Sum_probs=108.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|+|||++.+..++.++|
T Consensus       125 qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (297)
T cd06659         125 SVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVD  199 (297)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccceecCccccCHHHHccCCCCchhh
Confidence            5789999999   89999999999999999999999999998865433211  112234788999999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||......  .....+.   ..        ..............+.+++.+||+.+|.+||++.
T Consensus       200 v~slG~il~el~~g~~p~~~~~~~--~~~~~~~---~~--------~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~  266 (297)
T cd06659         200 IWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLR---DS--------PPPKLKNAHKISPVLRDFLERMLTREPQERATAQ  266 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh---cc--------CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence            999999999999999999743211  1111110   00        0000011112234677899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       267 ~ll~~  271 (297)
T cd06659         267 ELLDH  271 (297)
T ss_pred             HHhhC
Confidence            99884


No 216
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93  E-value=1.3e-26  Score=172.58  Aligned_cols=148  Identities=28%  Similarity=0.446  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|++|||   +.|++|+||+|.||+++.++.++|+|||.+........ .......++..|++||...+..++.++|
T Consensus       108 ~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~D  183 (256)
T cd05112         108 DVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHH
Confidence            5788999999   88999999999999999999999999998875543211 1111122456799999988888899999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  .......    .      .......+.   .....+.+++.+||+.+|++|||+
T Consensus       184 v~slG~~l~el~~~g~~p~~~~~~--~~~~~~~----~------~~~~~~~~~---~~~~~~~~l~~~~l~~~p~~Rp~~  248 (256)
T cd05112         184 VWSFGVLMWEVFSEGKTPYENRSN--SEVVETI----N------AGFRLYKPR---LASQSVYELMQHCWKERPEDRPSF  248 (256)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHH----h------CCCCCCCCC---CCCHHHHHHHHHHcccChhhCCCH
Confidence            9999999999998 8999864321  1111110    0      000000111   123468889999999999999999


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++++.|.
T Consensus       249 ~~~l~~l~  256 (256)
T cd05112         249 SLLLHQLA  256 (256)
T ss_pred             HHHHHhhC
Confidence            99998873


No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93  E-value=3.8e-26  Score=173.34  Aligned_cols=146  Identities=23%  Similarity=0.363  Sum_probs=104.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+.........  .....++..|++||.+.     ...+
T Consensus       118 ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  192 (292)
T cd06644         118 QMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR--RDSFIGTPYWMAPEVVMCETMKDTPY  192 (292)
T ss_pred             HHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc--cceecCCccccCceeeccccccCCCC
Confidence            5789999999   899999999999999999999999999987654322111  12234678899999874     3346


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||..... ......    ....       ..+.. .........+.+++.+||..+|++
T Consensus       193 ~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~----~~~~-------~~~~~-~~~~~~~~~~~~li~~~l~~~p~~  259 (292)
T cd06644         193 DYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLK----IAKS-------EPPTL-SQPSKWSMEFRDFLKTALDKHPET  259 (292)
T ss_pred             CchhhhHhHHHHHHHHhcCCCCCccccH-HHHHHH----HhcC-------CCccC-CCCcccCHHHHHHHHHHhcCCccc
Confidence            7789999999999999999999864321 110000    0000       00000 011222346778999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      ||++.++++
T Consensus       260 Rp~~~~il~  268 (292)
T cd06644         260 RPSAAQLLE  268 (292)
T ss_pred             CcCHHHHhc
Confidence            999999875


No 218
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93  E-value=2e-26  Score=171.52  Aligned_cols=145  Identities=26%  Similarity=0.447  Sum_probs=109.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||...+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~D  183 (256)
T cd08221         109 QIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcch
Confidence            5789999999   89999999999999999999999999999876543321  112234788999999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||......  ....             .......+.........+.+++.+||..+|.+||++.
T Consensus       184 v~slG~i~~~l~~g~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~  248 (256)
T cd08221         184 IWALGCVLYELLTLKRTFDATNPL--NLVV-------------KIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTAD  248 (256)
T ss_pred             hHHHHHHHHHHHHCCCCCCCCCHH--HHHH-------------HHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHH
Confidence            999999999999999998643211  1111             0111111222223345678899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       249 ~ll~~  253 (256)
T cd08221         249 EVLDQ  253 (256)
T ss_pred             HHhhC
Confidence            99864


No 219
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=1.5e-26  Score=176.04  Aligned_cols=146  Identities=25%  Similarity=0.388  Sum_probs=107.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++|+|||++.........  .....++..|++||.+.+..++.++|
T Consensus       123 ~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (296)
T cd06655         123 ECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  197 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc--CCCcCCCccccCcchhcCCCCCchhh
Confidence            5788999999   899999999999999999999999999987654332111  11234678899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|||||++|++++|..||........ . ..+.   ..        ..............+.+++.+||..||.+|||+.
T Consensus       198 v~slGvil~~lltg~~pf~~~~~~~~-~-~~~~---~~--------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~  264 (296)
T cd06655         198 IWSLGIMAIEMVEGEPPYLNENPLRA-L-YLIA---TN--------GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAK  264 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHH---hc--------CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHH
Confidence            99999999999999999965432111 0 0000   00        0000111122334677899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       265 ~il~  268 (296)
T cd06655         265 ELLQ  268 (296)
T ss_pred             HHhh
Confidence            9875


No 220
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93  E-value=2.9e-26  Score=170.85  Aligned_cols=141  Identities=25%  Similarity=0.428  Sum_probs=105.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-------CeeecccccceeeccCCCcceeeeecccccccccccccCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-------KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~   73 (200)
                      |+++||+|||   ++|++|+||||.||+++.++       .++|+|||++......      ....+...|++||.+...
T Consensus       109 ~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         109 QLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR------EERVERIPWIAPECIRNG  179 (259)
T ss_pred             HHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc------cccccCCCccChhhhcCC
Confidence            6889999999   89999999999999998877       7999999998765431      112356679999998776


Q ss_pred             --CCCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcC
Q 047677           74 --KVDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTT  150 (200)
Q Consensus        74 --~~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  150 (200)
                        .++.++|+||||+++|++++ |..||.......  ......            .....+..   ....+.+++.+||.
T Consensus       180 ~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~~~~~------------~~~~~~~~---~~~~~~~li~~~l~  242 (259)
T cd05037         180 QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KERFYQ------------DQHRLPMP---DCAELANLINQCWT  242 (259)
T ss_pred             CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HHHHHh------------cCCCCCCC---CchHHHHHHHHHhc
Confidence              67889999999999999999 567775543111  111000            00011111   11578889999999


Q ss_pred             CCCCCCCCHHHHHHHHH
Q 047677          151 TQPALRPTMRSVVQMLE  167 (200)
Q Consensus       151 ~dp~~Rpt~~~il~~L~  167 (200)
                      .+|.+|||+.++++.|+
T Consensus       243 ~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         243 YDPTKRPSFRAILRDLN  259 (259)
T ss_pred             cChhhCCCHHHHHHhcC
Confidence            99999999999998874


No 221
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93  E-value=2.8e-26  Score=171.24  Aligned_cols=148  Identities=25%  Similarity=0.388  Sum_probs=111.8

Q ss_pred             ChhhhhhhhhcCC--CCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGC--ARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~--~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~   78 (200)
                      |+++||+|||..+  +.+++|+||+|.||+++.++.++|+|||.+..........  ....++..|++||.+.+..++.+
T Consensus       113 ~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~~pE~~~~~~~~~~  190 (265)
T cd08217         113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA--KTYVGTPYYMSPEQLNHMSYDEK  190 (265)
T ss_pred             HHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccc--cccccCCCccChhhhcCCCCCch
Confidence            5789999999554  6789999999999999999999999999987765432211  12347889999999988888899


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+||||++++++++|..||....  .......+             .....+.........+.+++.+||+.+|.+|||
T Consensus       191 ~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~  255 (265)
T cd08217         191 SDIWSLGCLIYELCALSPPFTARN--QLQLASKI-------------KEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPS  255 (265)
T ss_pred             hHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHH-------------hcCCCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence            999999999999999999997543  11111111             111111222233457888999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      +.++++.
T Consensus       256 ~~~il~~  262 (265)
T cd08217         256 TEELLQL  262 (265)
T ss_pred             HHHHhhC
Confidence            9999864


No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93  E-value=1.4e-26  Score=174.79  Aligned_cols=145  Identities=25%  Similarity=0.381  Sum_probs=105.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+........  ......++..|+|||.+.     ...+
T Consensus       129 qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~  203 (282)
T cd06636         129 EILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATY  203 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCC
Confidence            6889999999   89999999999999999999999999998865432211  112234788899999875     2356


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||.......... .           ........  .........+.+++.+||..||.+
T Consensus       204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-~-----------~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~  269 (282)
T cd06636         204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-L-----------IPRNPPPK--LKSKKWSKKFIDFIEGCLVKNYLS  269 (282)
T ss_pred             CcccchhHHHHHHHHHHhCCCCccccCHHhhhh-h-----------HhhCCCCC--CcccccCHHHHHHHHHHhCCChhh
Confidence            788999999999999999999996432111000 0           00000000  011123347888999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.++++
T Consensus       270 Rp~~~ell~  278 (282)
T cd06636         270 RPSTEQLLK  278 (282)
T ss_pred             CcCHHHHhc
Confidence            999999874


No 223
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93  E-value=1.4e-26  Score=172.36  Aligned_cols=144  Identities=28%  Similarity=0.461  Sum_probs=109.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++++|||.+.........  .....++..|++||...+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~D  183 (256)
T cd08218         109 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh--hhhccCCccccCHHHhCCCCCCCccc
Confidence            5789999999   899999999999999999999999999998765432211  11233677899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||++++++++|..||.....  ..   ..          ........+.........+.+++.+||+.+|.+||++.
T Consensus       184 v~slG~i~~~l~~g~~~~~~~~~--~~---~~----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (256)
T cd08218         184 IWALGCVLYEMCTLKHAFEAGNM--KN---LV----------LKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVN  248 (256)
T ss_pred             hhHHHHHHHHHHcCCCCccCCCH--HH---HH----------HHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHH
Confidence            99999999999999999864321  11   11          11111222222223345688899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       249 ~vl~  252 (256)
T cd08218         249 SILE  252 (256)
T ss_pred             HHhh
Confidence            9986


No 224
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.93  E-value=2.2e-26  Score=172.40  Aligned_cols=148  Identities=22%  Similarity=0.368  Sum_probs=105.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||++........  ......++..|+|||.+.   ...++.
T Consensus       114 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (267)
T cd06645         114 ETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc--ccccccCcccccChhhhccccCCCCCc
Confidence            5789999999   88999999999999999999999999999866543211  112234788999999864   345788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||+||++|++++|..||........ .....    .  ...   ..... .........+.+++.+||+.+|++||
T Consensus       189 ~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~----~--~~~---~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~  257 (267)
T cd06645         189 LCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMT----K--SNF---QPPKL-KDKMKWSNSFHHFVKMALTKNPKKRP  257 (267)
T ss_pred             hhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhh----c--cCC---CCCcc-cccCCCCHHHHHHHHHHccCCchhCc
Confidence            99999999999999999999864322111 00000    0  000   00000 00111234577899999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      |+.++++
T Consensus       258 ~~~~ll~  264 (267)
T cd06645         258 TAEKLLQ  264 (267)
T ss_pred             CHHHHhc
Confidence            9999875


No 225
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.93  E-value=1e-26  Score=176.08  Aligned_cols=146  Identities=28%  Similarity=0.394  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||++........   .....++..|+|||.+.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05630         110 EICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccc
Confidence            5789999999   89999999999999999999999999999865433221   11234788999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchh-HHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC-
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKD-IVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT-  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-  158 (200)
                      +||+|+++|++++|..||......... ......          ......++.   .....+.+++.+||+.||.+||| 
T Consensus       184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~s~  250 (285)
T cd05630         184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV----------KEVQEEYSE---KFSPDARSLCKMLLCKDPKERLGC  250 (285)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh----------hhhhhhcCc---cCCHHHHHHHHHHhhcCHHHccCC
Confidence            999999999999999999754322110 000000          000011111   12345778999999999999999 


Q ss_pred             ----HHHHHHH
Q 047677          159 ----MRSVVQM  165 (200)
Q Consensus       159 ----~~~il~~  165 (200)
                          +.++++.
T Consensus       251 ~~~~~~~~~~h  261 (285)
T cd05630         251 QGGGAREVKEH  261 (285)
T ss_pred             CCCchHHHHcC
Confidence                7788763


No 226
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=2.1e-26  Score=178.62  Aligned_cols=143  Identities=24%  Similarity=0.410  Sum_probs=115.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeE-eCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCC-Cc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNIL-LDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVD-EK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil-~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~-~~   78 (200)
                      ||+.|+.|+|.+|   +|||||||+||. +.+-|-+||.|||++..+...... .  ...|...|-|||++.+..|. ++
T Consensus       126 QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL-~--TsCGSLAYSAPEILLGDsYDAPA  199 (864)
T KOG4717|consen  126 QIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL-T--TSCGSLAYSAPEILLGDSYDAPA  199 (864)
T ss_pred             HHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcchh-h--cccchhhccCchhhhcCccCCcc
Confidence            6889999999655   999999999965 477899999999999877654322 2  23478999999999999986 56


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +||||||+++|.+++|+.||+               .+....++..+++..+.- +.....++.+||..||.+||.+|.+
T Consensus       200 VDiWSLGVILyMLVCGq~PFq---------------eANDSETLTmImDCKYtv-PshvS~eCrdLI~sMLvRdPkkRAs  263 (864)
T KOG4717|consen  200 VDIWSLGVILYMLVCGQPPFQ---------------EANDSETLTMIMDCKYTV-PSHVSKECRDLIQSMLVRDPKKRAS  263 (864)
T ss_pred             hhhhHHHHHHHHHHhCCCccc---------------cccchhhhhhhhcccccC-chhhhHHHHHHHHHHHhcCchhhcc
Confidence            899999999999999999997               344455666666665532 4455668889999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      .++|...
T Consensus       264 lEeI~s~  270 (864)
T KOG4717|consen  264 LEEIVST  270 (864)
T ss_pred             HHHHhcc
Confidence            9998753


No 227
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93  E-value=4.9e-26  Score=171.52  Aligned_cols=145  Identities=29%  Similarity=0.482  Sum_probs=109.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++++|||++........  ......++..|++||...+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~D  183 (277)
T cd06640         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHH
Confidence            5789999999   89999999999999999999999999999866543221  111234677899999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||.......  ..             ........+.........+.+++.+||..+|++||++.
T Consensus       184 v~slG~il~el~tg~~p~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06640         184 IWSLGITAIELAKGEPPNSDMHPMR--VL-------------FLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAK  248 (277)
T ss_pred             HHHHHHHHHHHHHCCCCCCCcChHh--Hh-------------hhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHH
Confidence            9999999999999999986432110  00             00001111222334456788899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       249 ~il~~  253 (277)
T cd06640         249 ELLKH  253 (277)
T ss_pred             HHHhC
Confidence            99765


No 228
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93  E-value=4.6e-26  Score=172.34  Aligned_cols=146  Identities=28%  Similarity=0.472  Sum_probs=105.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK------   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~------   74 (200)
                      |+++||.|||+  +.|++|+||+|+||+++.++.++|+|||.+.........    ...++..|++||.+.+..      
T Consensus       110 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  183 (286)
T cd06622         110 AVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK----TNIGCQSYMAPERIKSGGPNQNPT  183 (286)
T ss_pred             HHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc----cCCCccCccCcchhcCCCCCccCC
Confidence            57899999994  369999999999999999999999999998655332111    123677899999875443      


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      ++.++|+|||||++|++++|..||.......  ....          .........+.........+.+++.+||+.+|+
T Consensus       184 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  251 (286)
T cd06622         184 YTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQ----------LSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPN  251 (286)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHH----------HHHHhhcCCCCCCcccCHHHHHHHHHHcccCcc
Confidence            4778999999999999999999996432111  1100          011111111222223445778899999999999


Q ss_pred             CCCCHHHHHH
Q 047677          155 LRPTMRSVVQ  164 (200)
Q Consensus       155 ~Rpt~~~il~  164 (200)
                      +||++.+++.
T Consensus       252 ~Rp~~~~l~~  261 (286)
T cd06622         252 RRPTYAQLLE  261 (286)
T ss_pred             cCCCHHHHhc
Confidence            9999999986


No 229
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93  E-value=3.7e-26  Score=170.88  Aligned_cols=147  Identities=32%  Similarity=0.536  Sum_probs=109.7

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   + .|++|+||+|.||+++.++.++|+|||.+..........    ..++..|++||...+..++.++
T Consensus       108 ~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~  180 (265)
T cd06605         108 AVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT----FVGTSSYMAPERIQGNDYSVKS  180 (265)
T ss_pred             HHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc----ccCChhccCHHHHcCCCCCchh
Confidence            5789999999   7 899999999999999999999999999886553321111    4467889999999888899999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHH-HHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKE-NAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|++++|..||................          ......+..... ....+.+++.+||..||.+|||
T Consensus       181 Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  250 (265)
T cd06605         181 DIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY----------IVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS  250 (265)
T ss_pred             hHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH----------HhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC
Confidence            99999999999999999997543222222111111          111111111111 4456888999999999999999


Q ss_pred             HHHHHH
Q 047677          159 MRSVVQ  164 (200)
Q Consensus       159 ~~~il~  164 (200)
                      +.+++.
T Consensus       251 ~~~ll~  256 (265)
T cd06605         251 YKELLE  256 (265)
T ss_pred             HHHHhh
Confidence            999875


No 230
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93  E-value=1.1e-26  Score=177.11  Aligned_cols=157  Identities=21%  Similarity=0.279  Sum_probs=106.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++........  ......++..|++||.+.+. .++.++
T Consensus       112 qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~  186 (301)
T cd07873         112 QLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQI  186 (301)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHH
Confidence            5889999999   89999999999999999999999999999865432211  11112357889999987654 467889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-c-cchhh------hhccCCCCCc--------hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-S-KQSVL------TLVDSSIPET--------FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~-~~~~~------~~~~~~~~~~--------~~~~~~~~~~  143 (200)
                      |+||||+++|+|++|..||.......  ....+..... . .....      ......++..        .......+.+
T Consensus       187 Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (301)
T cd07873         187 DMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAE  264 (301)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHH
Confidence            99999999999999999997543211  1111100000 0 00000      0000011110        0112345778


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||+.||.+|||+.++++
T Consensus       265 li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         265 LLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHHhcCCcccCcCHHHHhc
Confidence            999999999999999999876


No 231
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.93  E-value=2e-26  Score=171.95  Aligned_cols=141  Identities=22%  Similarity=0.435  Sum_probs=102.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCC--------eeecccccceeeccCCCcceeeeecccccccccccccC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLK--------PRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~--------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~   72 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.        ++++|||.+......      ....++..|++||.+.+
T Consensus       108 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         108 QLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------EILLERIPWVPPECIEN  178 (258)
T ss_pred             HHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc------hhccccCCccCchhccC
Confidence            6889999999   899999999999999977654        588999987544321      11235778999999876


Q ss_pred             C-CCCCccchhhHhHHHHHHHhCC-CCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcC
Q 047677           73 S-KVDEKSDVYSFGVVLMELVTGK-KPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTT  150 (200)
Q Consensus        73 ~-~~~~~~Di~slG~~~~~l~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  150 (200)
                      . .++.++|+||||+++|++++|. .||........  ...    ..        ....++..   ....+.+++.+||+
T Consensus       179 ~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~~~----~~--------~~~~~~~~---~~~~~~~li~~~l~  241 (258)
T cd05078         179 PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--LQF----YE--------DRHQLPAP---KWTELANLINQCMD  241 (258)
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--HHH----HH--------ccccCCCC---CcHHHHHHHHHHhc
Confidence            4 4788999999999999999985 55543221110  000    00        01112221   22467889999999


Q ss_pred             CCCCCCCCHHHHHHHHH
Q 047677          151 TQPALRPTMRSVVQMLE  167 (200)
Q Consensus       151 ~dp~~Rpt~~~il~~L~  167 (200)
                      .||++|||++++++.|+
T Consensus       242 ~~p~~Rps~~~il~~l~  258 (258)
T cd05078         242 YEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             cChhhCCCHHHHHHhcC
Confidence            99999999999998874


No 232
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93  E-value=2e-25  Score=157.41  Aligned_cols=143  Identities=19%  Similarity=0.186  Sum_probs=104.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +++      ||+||+++.++.+++  ||.+.......       ..+++.|+|||++.+..++.++|
T Consensus        25 qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~D   86 (176)
T smart00750       25 QCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKAD   86 (176)
T ss_pred             HHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhh
Confidence            6889999999   566      999999999999998  99887654321       14689999999999989999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHH--HHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAV--EILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~cl~~dp~~Rpt  158 (200)
                      ||||||++|++++|..||...................        ..............  .+.+++.+||..+|.+|||
T Consensus        87 iwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~  158 (176)
T smart00750       87 IYSLGITLYEALDYELPYNEERELSAILEILLNGMPA--------DDPRDRSNLESVSAARSFADFMRVCASRLPQRREA  158 (176)
T ss_pred             HHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc--------CCccccccHHHHHhhhhHHHHHHHHHhcccccccC
Confidence            9999999999999999996543222222222111100        00000111222222  5889999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++++.+...
T Consensus       159 ~~~ll~~~~~~  169 (176)
T smart00750      159 ANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHHHH
Confidence            99999987655


No 233
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93  E-value=3.1e-26  Score=171.58  Aligned_cols=146  Identities=23%  Similarity=0.376  Sum_probs=104.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC-cceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG-KDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   +.|++|+||+|+||+++.++.++|+|||++........ ........++..|+|||.+.+..++.++
T Consensus       114 qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (266)
T cd06651         114 QILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKA  190 (266)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchh
Confidence            5889999999   89999999999999999999999999999865432111 1111223467889999999888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||+||++|++++|..||....... ....             .......+.........+..++ +||..+|++||++
T Consensus       191 Dv~slG~i~~el~~g~~pf~~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~  255 (266)
T cd06651         191 DVWSLGCTVVEMLTEKPPWAEYEAMA-AIFK-------------IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSA  255 (266)
T ss_pred             hhHHHHHHHHHHHHCCCCccccchHH-HHHH-------------HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCH
Confidence            99999999999999999997432111 0000             0000111111122223445555 6888999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .+++.
T Consensus       256 ~eil~  260 (266)
T cd06651         256 EELLR  260 (266)
T ss_pred             HHHhc
Confidence            99975


No 234
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.93  E-value=1.3e-26  Score=173.37  Aligned_cols=156  Identities=22%  Similarity=0.308  Sum_probs=111.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeC--------------------CCCCeeecccccceeeccCCCcceeeeecc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLD--------------------EFLKPRIADFGLARIVQSNGGKDTTHVIAG   60 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~--------------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~   60 (200)
                      |++++++|||   +.+++|.||||+||++.                    .+..++|+|||.+++.....     .....
T Consensus       200 QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVs  271 (415)
T KOG0671|consen  200 QLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVS  271 (415)
T ss_pred             HHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeee
Confidence            7899999999   89999999999999983                    13457899999997765432     23456


Q ss_pred             cccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchh-HHHHHHHhhcc-------------cchh----
Q 047677           61 TTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKD-IVRWVCSHFNS-------------KQSV----  122 (200)
Q Consensus        61 ~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~-------------~~~~----  122 (200)
                      |..|.|||++.+.+++.+.|+||+||++.|+.+|...|+...+...- .++.++.....             .+.+    
T Consensus       272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e  351 (415)
T KOG0671|consen  272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPE  351 (415)
T ss_pred             ccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcc
Confidence            88999999999999999999999999999999999999876633211 11111110000             0000    


Q ss_pred             -------hhhccCCCC-----CchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          123 -------LTLVDSSIP-----ETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       123 -------~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                             ........|     .....+...+.+|+.+||..||.+|+|+.|++.
T Consensus       352 ~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  352 VSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             ccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                   000000111     113455567999999999999999999999975


No 235
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93  E-value=2.6e-26  Score=181.35  Aligned_cols=140  Identities=26%  Similarity=0.329  Sum_probs=107.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEe-CCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILL-DEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      +++.|+.|||   ++|+|||||||+|||+ +..++++|+|||.+..........     .-|..|.|||+.....++.++
T Consensus       423 ~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp-----~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  423 ELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTP-----ALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhccc-----chhhcccChhhhccCCCCcch
Confidence            4678999999   8999999999999999 688999999999987655431111     136789999999988999999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||||+++|+|++|+.||.....+ .++...             +..+...   ...+....+|+.+||+.||.+||++
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~-------------i~~~~~s---~~vS~~AKdLl~~LL~~dP~~Rl~~  557 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTR-------------IQMPKFS---ECVSDEAKDLLQQLLQVDPALRLGA  557 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCCch-HHHHHh-------------hcCCccc---cccCHHHHHHHHHhccCChhhCcCh
Confidence            9999999999999999999865443 111111             1111111   2333456678889999999999999


Q ss_pred             HHHHHH
Q 047677          160 RSVVQM  165 (200)
Q Consensus       160 ~~il~~  165 (200)
                      .++...
T Consensus       558 ~~i~~h  563 (612)
T KOG0603|consen  558 DEIGAH  563 (612)
T ss_pred             hhhccC
Confidence            998653


No 236
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93  E-value=4.1e-26  Score=171.06  Aligned_cols=146  Identities=25%  Similarity=0.413  Sum_probs=105.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCCC--CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK--VDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~--~~~   77 (200)
                      |+++||+|||   ++|++|+||||.||+++. .+.++|+|||.+.........  .....++..|++||.+....  ++.
T Consensus       116 qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~  190 (268)
T cd06624         116 QILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC--TETFTGTLQYMAPEVIDKGPRGYGA  190 (268)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc--cccCCCCccccChhhhccccccCCc
Confidence            5889999999   899999999999999976 678999999998765432211  11224678999999876543  678


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||+|+++|++++|..||............             .......+..+......+.+++.+||+.+|.+||
T Consensus       191 ~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  257 (268)
T cd06624         191 PADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-------------VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRA  257 (268)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-------------hhhhccCCCCCcccCHHHHHHHHHHcCCCchhCC
Confidence            999999999999999999998643221110000             0000111111222345678899999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      |+.++++
T Consensus       258 t~~~ll~  264 (268)
T cd06624         258 SAHDLLQ  264 (268)
T ss_pred             CHHHHHh
Confidence            9999875


No 237
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93  E-value=2.8e-26  Score=173.57  Aligned_cols=146  Identities=27%  Similarity=0.363  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||||.||+++.++.++|+|||++.......   ......++..|++||.+.+..++.++|
T Consensus       110 ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~D  183 (285)
T cd05632         110 EILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccc
Confidence            6789999999   8999999999999999999999999999886543221   112235789999999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC--
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT--  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  158 (200)
                      +||+|+++|++++|..||........  .........       .....++.   .....+.+++..||+.||++||+  
T Consensus       184 i~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~-------~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         184 YWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVL-------ETEEVYSA---KFSEEAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhh-------ccccccCc---cCCHHHHHHHHHHccCCHhHcCCCc
Confidence            99999999999999999975322111  000000000       00011111   12335678889999999999999  


Q ss_pred             ---HHHHHH
Q 047677          159 ---MRSVVQ  164 (200)
Q Consensus       159 ---~~~il~  164 (200)
                         +.+++.
T Consensus       252 ~~~~~~l~~  260 (285)
T cd05632         252 EEGAGEVKR  260 (285)
T ss_pred             ccChHHHHc
Confidence               556654


No 238
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=2.7e-26  Score=174.69  Aligned_cols=146  Identities=24%  Similarity=0.370  Sum_probs=107.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +.|++|+||||+||+++.++.++|+|||++.........  .....++..|++||...+..++.++|
T Consensus       123 ~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (297)
T cd06656         123 ECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  197 (297)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC--cCcccCCccccCHHHHcCCCCCcHHH
Confidence            5789999999   899999999999999999999999999998654332211  11234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||..........             ............+......+.+++.+||..+|++|||+.
T Consensus       198 i~slGvil~~l~tg~~pf~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  264 (297)
T cd06656         198 IWSLGIMAIEMVEGEPPYLNENPLRALY-------------LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAK  264 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcchhee-------------eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHH
Confidence            9999999999999999996432211000             000000000111222334577899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       265 ~il~  268 (297)
T cd06656         265 ELLQ  268 (297)
T ss_pred             HHhc
Confidence            9987


No 239
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93  E-value=1.9e-26  Score=174.59  Aligned_cols=149  Identities=30%  Similarity=0.433  Sum_probs=106.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC---CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS---KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~---~~~~   77 (200)
                      |+++||+|||+  +.|++||||||+||+++.++.++|+|||++.........   ....++..|++||.+.+.   .++.
T Consensus       115 ~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  189 (288)
T cd06616         115 ATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSARDGYDV  189 (288)
T ss_pred             HHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc---ccccCccCccCHHHhccccccCCcc
Confidence            57889999993  359999999999999999999999999998655432211   112367889999998766   5788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCC-chHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPE-TFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ++|+||+||++|++++|..||.....    ............       .+..+. ........+.+++.+||+.||++|
T Consensus       190 ~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (288)
T cd06616         190 RSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVKGD-------PPILSNSEEREFSPSFVNFINLCLIKDESKR  258 (288)
T ss_pred             hhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcCCC-------CCcCCCcCCCccCHHHHHHHHHHccCChhhC
Confidence            99999999999999999999964321    111110000000       001111 112234578889999999999999


Q ss_pred             CCHHHHHHH
Q 047677          157 PTMRSVVQM  165 (200)
Q Consensus       157 pt~~~il~~  165 (200)
                      ||+.+++..
T Consensus       259 pt~~~i~~~  267 (288)
T cd06616         259 PKYKELLEH  267 (288)
T ss_pred             cCHHHHhcC
Confidence            999998764


No 240
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93  E-value=3.8e-26  Score=173.23  Aligned_cols=146  Identities=25%  Similarity=0.373  Sum_probs=104.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-----CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-----KV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-----~~   75 (200)
                      |++.||.|||   ++|++|+||||+||+++.++.++|+|||++..........  ....++..|++||.+...     .+
T Consensus       136 qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  210 (291)
T cd06639         136 GALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQYDYSY  210 (291)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccc--cCccCCccccChhhhcCCCCccccc
Confidence            5788999999   8999999999999999999999999999987654322111  112367889999987543     25


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||........ ...    ...  ..     .... .........+.+++.+||+.+|++
T Consensus       211 ~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~~~----~~~--~~-----~~~~-~~~~~~~~~l~~li~~~l~~~p~~  277 (291)
T cd06639         211 DARCDVWSLGITAIELGDGDPPLFDMHPVKT-LFK----IPR--NP-----PPTL-LHPEKWCRSFNHFISQCLIKDFEA  277 (291)
T ss_pred             CCccchHHHHHHHHHHhhCCCCCCCCcHHHH-HHH----Hhc--CC-----CCCC-CcccccCHHHHHHHHHHhhcChhh
Confidence            7899999999999999999999864321110 000    000  00     0000 011122346888999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      ||++.++++
T Consensus       278 Rps~~~il~  286 (291)
T cd06639         278 RPSVTHLLE  286 (291)
T ss_pred             CcCHHHHhc
Confidence            999999976


No 241
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.93  E-value=3.6e-26  Score=173.03  Aligned_cols=146  Identities=25%  Similarity=0.380  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++||||+|.||+++.++.++|+|||.+.......  .......++..|++||...+..++.++|
T Consensus       123 ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (285)
T cd06648         123 AVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVD  197 (285)
T ss_pred             HHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCccc
Confidence            5789999999   8999999999999999999999999999875443221  1112234788999999988878889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|+++|++++|..||.....  ......+.   ..        ..............+.+++.+||+.+|++|||+.
T Consensus       198 v~slGv~l~ell~g~~p~~~~~~--~~~~~~~~---~~--------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  264 (285)
T cd06648         198 IWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIR---DN--------LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAA  264 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHH---hc--------CCCCCcccccCCHHHHHHHHHHcccChhhCcCHH
Confidence            99999999999999999864221  11111000   00        0000011111335788899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       265 ~il~  268 (285)
T cd06648         265 ELLN  268 (285)
T ss_pred             HHcc
Confidence            9985


No 242
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93  E-value=4.1e-26  Score=171.28  Aligned_cols=146  Identities=27%  Similarity=0.444  Sum_probs=105.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-----CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-----SKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-----~~~   75 (200)
                      |+++||+|||   +.|++|+||+|+||+++.++.++|+|||.+........  ......++..|+|||.+..     ..+
T Consensus       121 ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  195 (275)
T cd06608         121 ETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASY  195 (275)
T ss_pred             HHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchh--hhcCccccccccCHhHhcccccccCCc
Confidence            5889999999   89999999999999999999999999999866543221  1122347888999998643     235


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||||+++|++++|..||...... ......    ..       ...... .........+.+++.+||..||.+
T Consensus       196 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~-------~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~  262 (275)
T cd06608         196 DARSDVWSLGITAIELADGKPPLCDMHPM-RALFKI----PR-------NPPPTL-KSPENWSKKFNDFISECLIKNYEQ  262 (275)
T ss_pred             cccccHHHhHHHHHHHHhCCCCccccchH-HHHHHh----hc-------cCCCCC-CchhhcCHHHHHHHHHHhhcChhh
Confidence            67899999999999999999999643211 111100    00       000011 111223457888999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.++++
T Consensus       263 Rpt~~~ll~  271 (275)
T cd06608         263 RPFMEELLE  271 (275)
T ss_pred             CcCHHHHhc
Confidence            999999975


No 243
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.93  E-value=4.3e-26  Score=190.63  Aligned_cols=144  Identities=31%  Similarity=0.492  Sum_probs=108.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec---c-------------CCCcceeeeecccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ---S-------------NGGKDTTHVIAGTTGY   64 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~---~-------------~~~~~~~~~~~~~~~~   64 (200)
                      +|++||+|+|   ++|+|||||||.||+++.++.+||+|||++....   .             .......+...||.-|
T Consensus       705 eIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  705 EILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             HHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeee
Confidence            5899999999   8999999999999999999999999999997621   0             0011123445799999


Q ss_pred             cccccccCC---CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc---hHHHH
Q 047677           65 IAPEYGYTS---KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET---FKENA  138 (200)
Q Consensus        65 ~~pE~~~~~---~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  138 (200)
                      +|||.+.+.   .|+.|+|+||||++++||+.-   |.....              ....+..+.++.+|..   +.+..
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsME--------------Ra~iL~~LR~g~iP~~~~f~~~~~  844 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSME--------------RASILTNLRKGSIPEPADFFDPEH  844 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHH--------------HHHHHHhcccCCCCCCcccccccc
Confidence            999987655   489999999999999999743   542211              1122233334455554   55666


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          139 VEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       139 ~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.-..+|++|++.||.+|||+.|+|.
T Consensus       845 ~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  845 PEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             hHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            66678999999999999999999875


No 244
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.93  E-value=6.2e-26  Score=176.63  Aligned_cols=158  Identities=23%  Similarity=0.270  Sum_probs=109.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++........   .....++..|++||.+.+..++.++|
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (353)
T cd07850         126 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  199 (353)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchh
Confidence            5789999999   89999999999999999999999999999876543211   11223678899999998888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHh------------------hcccc-----hhhhhccCC-CC----C
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSH------------------FNSKQ-----SVLTLVDSS-IP----E  132 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~------------------~~~~~-----~~~~~~~~~-~~----~  132 (200)
                      +|||||++|++++|..||........ ........                  .....     ......... .+    .
T Consensus       200 vwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (353)
T cd07850         200 IWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSES  278 (353)
T ss_pred             hHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccc
Confidence            99999999999999999965432110 00000000                  00000     000000000 00    0


Q ss_pred             chHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          133 TFKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       133 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ........+.+++.+||+.||.+|||+.++++.
T Consensus       279 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         279 HNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             ccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            011234567889999999999999999999864


No 245
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.93  E-value=4.3e-26  Score=175.75  Aligned_cols=160  Identities=22%  Similarity=0.302  Sum_probs=104.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-----ceeeeecccccccccccccC--C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-----DTTHVIAGTTGYIAPEYGYT--S   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~pE~~~~--~   73 (200)
                      |+++||+|||   ++|++||||||+||+++.++.+++.||+...........     .......++..|++||++.+  .
T Consensus       109 qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (327)
T cd08227         109 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQ  185 (327)
T ss_pred             HHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccC
Confidence            5889999999   899999999999999999999999999865433211110     01111235667999999876  3


Q ss_pred             CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-----------------ccchhhh------------
Q 047677           74 KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-----------------SKQSVLT------------  124 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~------------  124 (200)
                      .++.++|+|||||++|++++|..||.......... ........                 .......            
T Consensus       186 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         186 GYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            57899999999999999999999997532211100 00000000                 0000000            


Q ss_pred             --hccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          125 --LVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       125 --~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                        ................+.+++.+||+.||.+|||++++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence              0000000111223457889999999999999999999986


No 246
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.93  E-value=6.5e-26  Score=176.12  Aligned_cols=144  Identities=27%  Similarity=0.408  Sum_probs=114.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC----CCeeecccccceeeccCCCcceeeeecccccccccccccCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF----LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~----~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~   76 (200)
                      |+++|++|||   +.|++||||||+|+++...    +.++++|||++.....   ........|++.|+|||++....++
T Consensus       143 ~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~  216 (382)
T KOG0032|consen  143 QILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYG  216 (382)
T ss_pred             HHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCC
Confidence            6889999999   8999999999999999543    4799999999988765   2233446799999999999999999


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC---CCchHHHHHHHHHHHHHhcCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI---PETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ..+|+||+|+++|.|++|.+||..........               .+....+   .+.+......+.+++..|+..||
T Consensus       217 ~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------------~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  217 DEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------------AILRGDFDFTSEPWDDISESAKDFIRKLLEFDP  281 (382)
T ss_pred             cccchhHHHHHHHHHhhCCCCCcCCChhHHHH---------------HHHcCCCCCCCCCccccCHHHHHHHHHhcccCc
Confidence            99999999999999999999997654322111               1111111   12244445677788889999999


Q ss_pred             CCCCCHHHHHHH
Q 047677          154 ALRPTMRSVVQM  165 (200)
Q Consensus       154 ~~Rpt~~~il~~  165 (200)
                      .+|+|+.++++.
T Consensus       282 ~~R~ta~~~L~H  293 (382)
T KOG0032|consen  282 RKRLTAAQALQH  293 (382)
T ss_pred             ccCCCHHHHhcC
Confidence            999999999983


No 247
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.93  E-value=4.9e-26  Score=170.26  Aligned_cols=149  Identities=32%  Similarity=0.502  Sum_probs=109.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc--eeeeecccccccccccccCC-CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD--TTHVIAGTTGYIAPEYGYTS-KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~-~~~~   77 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||++..........  ......++..|++||.+... .++.
T Consensus       110 ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~  186 (267)
T cd06610         110 EVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDF  186 (267)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCc
Confidence            5789999999   8999999999999999999999999999986655432221  12223478889999988766 6788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc--hHHHHHHHHHHHHHhcCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET--FKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      ++|+||||++++++++|..||....... ......    .       .....++..  .......+.+++.+||..||++
T Consensus       187 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  254 (267)
T cd06610         187 KADIWSFGITAIELATGAAPYSKYPPMK-VLMLTL----Q-------NDPPSLETGADYKKYSKSFRKMISLCLQKDPSK  254 (267)
T ss_pred             ccchHhHhHHHHHHHhCCCCccccChhh-hHHHHh----c-------CCCCCcCCccccccccHHHHHHHHHHcCCChhh
Confidence            9999999999999999999996432211 010000    0       001111111  1233457788999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.++++
T Consensus       255 Rp~~~~ll~  263 (267)
T cd06610         255 RPTAEELLK  263 (267)
T ss_pred             CcCHHHHhh
Confidence            999999875


No 248
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.93  E-value=1.8e-26  Score=180.28  Aligned_cols=148  Identities=23%  Similarity=0.359  Sum_probs=105.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc---------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD---------------------------   53 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~---------------------------   53 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++..........                           
T Consensus       109 qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (364)
T cd05599         109 ETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKA  185 (364)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccc
Confidence            6889999999   8999999999999999999999999999986543211000                           


Q ss_pred             ---------eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhh
Q 047677           54 ---------TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLT  124 (200)
Q Consensus        54 ---------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (200)
                               ......||+.|+|||++.+..++.++|+|||||++|+|++|..||......  .....+.   .....   
T Consensus       186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~--~~~~~i~---~~~~~---  257 (364)
T cd05599         186 ETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ--ETYRKII---NWKET---  257 (364)
T ss_pred             cchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH--HHHHHHH---cCCCc---
Confidence                     001134889999999998888999999999999999999999999743211  1111110   00000   


Q ss_pred             hccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 047677          125 LVDSSIPETFKENAVEILRIAVLCTTTQPALRPT---MRSVVQ  164 (200)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt---~~~il~  164 (200)
                         ...+.. ......+.+++.+|+. +|.+|++   +.++++
T Consensus       258 ---~~~~~~-~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         258 ---LQFPDE-VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             ---cCCCCC-CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence               011111 1123466778888986 9999998   888766


No 249
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.93  E-value=2.2e-26  Score=181.81  Aligned_cols=152  Identities=22%  Similarity=0.366  Sum_probs=123.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||+.||+|||   +..+|||||-..||++.....+||+|||+++.+......... ...-...|++||.+....++.++|
T Consensus       499 Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASD  574 (974)
T KOG4257|consen  499 QICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASD  574 (974)
T ss_pred             HHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhh
Confidence            7899999999   899999999999999999999999999999887654433222 111345799999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|.||+.+||+++ |..||....+.+               ....+.++..++.+....+.++.++.+||+.+|.+||++
T Consensus       575 VWMFgVCmWEIl~lGvkPfqgvkNsD---------------VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrf  639 (974)
T KOG4257|consen  575 VWMFGVCMWEILSLGVKPFQGVKNSD---------------VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRF  639 (974)
T ss_pred             HHHHHHHHHHHHHhcCCccccccccc---------------eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcH
Confidence            9999999999997 889998654432               233334444455555666788999999999999999999


Q ss_pred             HHHHHHHHhhCC
Q 047677          160 RSVVQMLEEAEP  171 (200)
Q Consensus       160 ~~il~~L~~~~~  171 (200)
                      .++...|.+..+
T Consensus       640 tei~~~lsdv~q  651 (974)
T KOG4257|consen  640 TEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHHHHHHHH
Confidence            999999976655


No 250
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93  E-value=3.9e-26  Score=170.89  Aligned_cols=148  Identities=26%  Similarity=0.389  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc----ceeeeecccccccccccccCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK----DTTHVIAGTTGYIAPEYGYTSKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~pE~~~~~~~~   76 (200)
                      |++.||+|||   +.|++|+||+|.||+++.++.++|+|||.+.........    .......++..|+|||...+..++
T Consensus       110 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  186 (265)
T cd06631         110 QILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYG  186 (265)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCc
Confidence            5789999999   889999999999999999999999999988654321111    111123478889999999888889


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      .++|+||||+++|++++|..||........ ... ..   .        .....+.........+.+++.+||..+|.+|
T Consensus       187 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~-~~---~--------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  253 (265)
T cd06631         187 RKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFY-IG---A--------HRGLMPRLPDSFSAAAIDFVTSCLTRDQHER  253 (265)
T ss_pred             chhhHHHHHHHHHHHHhCCCccccCChHHH-HHH-hh---h--------ccCCCCCCCCCCCHHHHHHHHHHhcCCcccC
Confidence            999999999999999999999964321110 000 00   0        0001111122233467889999999999999


Q ss_pred             CCHHHHHH
Q 047677          157 PTMRSVVQ  164 (200)
Q Consensus       157 pt~~~il~  164 (200)
                      ||+.++++
T Consensus       254 p~~~~~l~  261 (265)
T cd06631         254 PSALQLLR  261 (265)
T ss_pred             CCHHHHhc
Confidence            99999875


No 251
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.93  E-value=6.4e-26  Score=173.73  Aligned_cols=161  Identities=20%  Similarity=0.256  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC----CCCeeecccccceeeccCCCc-ceeeeecccccccccccccCC-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE----FLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTS-K   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~----~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~-~   74 (200)
                      |++.||.|||   ++|++|+||||+||+++.    ++.++|+|||++......... .......++..|+|||...+. .
T Consensus       116 qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (316)
T cd07842         116 QILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH  192 (316)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCC
Confidence            6889999999   899999999999999998    899999999998765433221 111123467789999987664 4


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCc--------hhHHHHHHHhhcccc----------hhh----hhccCCCC-
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGEN--------KDIVRWVCSHFNSKQ----------SVL----TLVDSSIP-  131 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~----------~~~----~~~~~~~~-  131 (200)
                      ++.++|+||||++++++++|..||.......        ......+........          ...    .......+ 
T Consensus       193 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (316)
T cd07842         193 YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS  272 (316)
T ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC
Confidence            7889999999999999999999997544332        011111100000000          000    00001111 


Q ss_pred             CchH-------HHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          132 ETFK-------ENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       132 ~~~~-------~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ....       .....+.+++.+||+.||++|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         273 NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0111       23346889999999999999999999875


No 252
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.93  E-value=3.6e-26  Score=172.51  Aligned_cols=145  Identities=30%  Similarity=0.421  Sum_probs=106.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||||+||+++.++.++|+|||++........    ....++..|++||.... ..++.++
T Consensus       105 qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  177 (279)
T cd05633         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGTAYDSSA  177 (279)
T ss_pred             HHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc----cCcCCCcCccCHHHhcCCCCCCchh
Confidence            6789999999   89999999999999999999999999999865432211    12347889999998764 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC--
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP--  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  157 (200)
                      |+||+||++|++++|..||...............          .......+.   .....+.+++.+||..||.+||  
T Consensus       178 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~  244 (279)
T cd05633         178 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT----------LTVNVELPD---SFSPELKSLLEGLLQRDVSKRLGC  244 (279)
T ss_pred             hhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh----------hcCCcCCcc---ccCHHHHHHHHHHhcCCHHHhcCC
Confidence            9999999999999999999754332221111000          001111222   2334677889999999999999  


Q ss_pred             ---CHHHHHHH
Q 047677          158 ---TMRSVVQM  165 (200)
Q Consensus       158 ---t~~~il~~  165 (200)
                         |++++++.
T Consensus       245 ~~~~~~~~~~h  255 (279)
T cd05633         245 LGRGAQEVKEH  255 (279)
T ss_pred             CCCCHHHHHhC
Confidence               58888764


No 253
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.93  E-value=6.3e-26  Score=190.32  Aligned_cols=155  Identities=27%  Similarity=0.387  Sum_probs=111.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC----------------cceeeeecccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG----------------KDTTHVIAGTTGY   64 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~----------------~~~~~~~~~~~~~   64 (200)
                      |+++||+|||   ++|++||||||+||+++.++.++|+|||++........                ........|++.|
T Consensus       121 QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~Y  197 (932)
T PRK13184        121 KICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDY  197 (932)
T ss_pred             HHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCC
Confidence            5789999999   89999999999999999999999999999876521100                0011123589999


Q ss_pred             cccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHH
Q 047677           65 IAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRI  144 (200)
Q Consensus        65 ~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  144 (200)
                      +|||...+..++.++|+|||||++|+|++|..||...........          ..   ...+............+.++
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~----------~~---i~~P~~~~p~~~iP~~L~~L  264 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR----------DV---ILSPIEVAPYREIPPFLSQI  264 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh----------hh---ccChhhccccccCCHHHHHH
Confidence            999999888899999999999999999999999965322110000          00   00000000012233467789


Q ss_pred             HHHhcCCCCCCCC-CHHHHHHHHHhhCC
Q 047677          145 AVLCTTTQPALRP-TMRSVVQMLEEAEP  171 (200)
Q Consensus       145 i~~cl~~dp~~Rp-t~~~il~~L~~~~~  171 (200)
                      +.+||..||++|+ +++++++.|+....
T Consensus       265 I~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        265 AMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999999996 56777777776644


No 254
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93  E-value=7.4e-26  Score=171.14  Aligned_cols=147  Identities=28%  Similarity=0.347  Sum_probs=105.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-----CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-----SKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-----~~~   75 (200)
                      |+++||.|||   +++++|+||||.||+++.++.++|+|||.+........  ......++..|+|||++..     ..+
T Consensus       132 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  206 (286)
T cd06638         132 EALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTY  206 (286)
T ss_pred             HHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccc
Confidence            5789999999   89999999999999999999999999999876543221  1112347889999998753     346


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||+||++|++++|..||.......    .... . . ..     ...... ........+.+++.+||+.||++
T Consensus       207 ~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----~~~~-~-~-~~-----~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  273 (286)
T cd06638         207 DARCDVWSLGITAIELGDGDPPLADLHPMR----ALFK-I-P-RN-----PPPTLH-QPELWSNEFNDFIRKCLTKDYEK  273 (286)
T ss_pred             cchhhhhhHHHHHHHHhcCCCCCCCCchhH----HHhh-c-c-cc-----CCCccc-CCCCcCHHHHHHHHHHccCCccc
Confidence            789999999999999999999986432111    0000 0 0 00     000000 01111236788999999999999


Q ss_pred             CCCHHHHHHH
Q 047677          156 RPTMRSVVQM  165 (200)
Q Consensus       156 Rpt~~~il~~  165 (200)
                      |||+.++++.
T Consensus       274 Rps~~ell~~  283 (286)
T cd06638         274 RPTVSDLLQH  283 (286)
T ss_pred             CCCHHHHhhc
Confidence            9999999864


No 255
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.93  E-value=3e-26  Score=179.32  Aligned_cols=149  Identities=26%  Similarity=0.361  Sum_probs=104.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC----CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK----VD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~----~~   76 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++......... ......|+..|+|||++.+..    ++
T Consensus       150 qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~  225 (370)
T cd05621         150 EVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce-ecccCCCCcccCCHHHHhccCCCCCCC
Confidence            5889999999   899999999999999999999999999998765432211 112345899999999876532    67


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC-
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL-  155 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~-  155 (200)
                      .++|+||+||++|+|++|..||......  .....+   .....      ....+. .......+.+++..|+..++.+ 
T Consensus       226 ~~~DiwSlG~ilyell~G~~Pf~~~~~~--~~~~~i---~~~~~------~~~~p~-~~~~s~~~~~li~~~L~~~~~r~  293 (370)
T cd05621         226 RECDWWSVGVFLFEMLVGDTPFYADSLV--GTYSKI---MDHKN------SLNFPE-DVEISKHAKNLICAFLTDREVRL  293 (370)
T ss_pred             cccCEEeehHHHHHHHhCCCCCCCCCHH--HHHHHH---HhCCc------ccCCCC-cccCCHHHHHHHHHHccCchhcc
Confidence            8999999999999999999999743211  111000   00000      011111 1122345667888898755543 


Q ss_pred             -CCCHHHHHHH
Q 047677          156 -RPTMRSVVQM  165 (200)
Q Consensus       156 -Rpt~~~il~~  165 (200)
                       |+|+.++++.
T Consensus       294 ~R~~~~e~l~h  304 (370)
T cd05621         294 GRNGVEEIKQH  304 (370)
T ss_pred             CCCCHHHHhcC
Confidence             8899998875


No 256
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93  E-value=6e-26  Score=171.53  Aligned_cols=158  Identities=23%  Similarity=0.323  Sum_probs=107.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   +.|++|+||||.||+++.++.++|+|||++.........  .....++..|++||.+.+ ..++.++
T Consensus       108 ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  182 (286)
T cd07847         108 QTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD--YTDYVATRWYRAPELLVGDTQYGPPV  182 (286)
T ss_pred             HHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCccc--ccCcccccccCCHHHHhCCCCcCchh
Confidence            6889999999   899999999999999999999999999998765443211  112235778999998766 4477899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc---------cchhhhhccCCCCC-------chHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS---------KQSVLTLVDSSIPE-------TFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-------~~~~~~~~~~~  143 (200)
                      |+||||+++|++++|..||......+... .........         ............+.       ........+.+
T Consensus       183 Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (286)
T cd07847         183 DVWAIGCVFAELLTGQPLWPGKSDVDQLY-LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALS  261 (286)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHH
Confidence            99999999999999999997543322111 110000000         00000000000000       01122456889


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||+.+|++|||+.+++.
T Consensus       262 li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         262 FLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHhcCCccccCCHHHHhc
Confidence            999999999999999999875


No 257
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.93  E-value=3.8e-26  Score=179.49  Aligned_cols=150  Identities=25%  Similarity=0.378  Sum_probs=103.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC-----------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG-----------------------------   51 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~-----------------------------   51 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++........                             
T Consensus       109 qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (381)
T cd05626         109 ELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC  185 (381)
T ss_pred             HHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccccccc
Confidence            5789999999   89999999999999999999999999998753211000                             


Q ss_pred             ----------------cceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 047677           52 ----------------KDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSH  115 (200)
Q Consensus        52 ----------------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  115 (200)
                                      ........|+..|+|||++.+..++.++|+|||||++|+|++|..||.......... . +   
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~-i---  260 (381)
T cd05626         186 GDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQL-K-V---  260 (381)
T ss_pred             ccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHH-H-H---
Confidence                            000112358899999999988889999999999999999999999997543211100 0 0   


Q ss_pred             hcccchhhhhccCCCCCchHHHHHHHHHHHHH--hcCCCCCCCCCHHHHHHH
Q 047677          116 FNSKQSVLTLVDSSIPETFKENAVEILRIAVL--CTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~--cl~~dp~~Rpt~~~il~~  165 (200)
                      .....      ....+. .......+.+++.+  |+..++..|+++.+++..
T Consensus       261 ~~~~~------~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         261 INWEN------TLHIPP-QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             Hcccc------ccCCCC-CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            00000      001111 11123456667766  445666679999999764


No 258
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.93  E-value=2.5e-26  Score=180.61  Aligned_cols=148  Identities=26%  Similarity=0.352  Sum_probs=101.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC-----------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG-----------------------------   51 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~-----------------------------   51 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++........                             
T Consensus       109 qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (382)
T cd05625         109 ELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRC  185 (382)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccc
Confidence            5789999999   89999999999999999999999999998743210000                             


Q ss_pred             ----------------cceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 047677           52 ----------------KDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSH  115 (200)
Q Consensus        52 ----------------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  115 (200)
                                      ........|++.|+|||++.+..++.++|+||+||++|+|++|..||........ ... +.  
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~-i~--  261 (382)
T cd05625         186 GDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLET-QMK-VI--  261 (382)
T ss_pred             cccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHH-HHH-HH--
Confidence                            0001123588999999999888899999999999999999999999975322110 000 00  


Q ss_pred             hcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 047677          116 FNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT---MRSVVQ  164 (200)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt---~~~il~  164 (200)
                       ....      ....+. .....+.+.+++.+|+ .+|.+|++   +.+++.
T Consensus       262 -~~~~------~~~~p~-~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         262 -NWQT------SLHIPP-QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             -ccCC------CcCCCC-cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence             0000      001111 1122345666776765 59999997   777654


No 259
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93  E-value=4.2e-25  Score=191.48  Aligned_cols=165  Identities=32%  Similarity=0.598  Sum_probs=120.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++|++|||..++.+++||||||+||+++..+..++. ++........      ....++..|+|||+..+..++.++|
T Consensus       788 ~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sD  860 (968)
T PLN00113        788 GIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSD  860 (968)
T ss_pred             HHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccc
Confidence            58899999997667899999999999999988877764 4443222111      1124678999999999888999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCC---CchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIP---ETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ||||||++||+++|+.||............|....... .......++...   ........++.+++.+||+.||++||
T Consensus       861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP  939 (968)
T PLN00113        861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP  939 (968)
T ss_pred             hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence            99999999999999999976554444555554432211 112222222221   12334556788999999999999999


Q ss_pred             CHHHHHHHHHhhCCCC
Q 047677          158 TMRSVVQMLEEAEPCN  173 (200)
Q Consensus       158 t~~~il~~L~~~~~~~  173 (200)
                      |++++++.|++.....
T Consensus       940 t~~evl~~L~~~~~~~  955 (968)
T PLN00113        940 CANDVLKTLESASRSS  955 (968)
T ss_pred             CHHHHHHHHHHhhccc
Confidence            9999999999886643


No 260
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93  E-value=9e-26  Score=167.83  Aligned_cols=142  Identities=27%  Similarity=0.418  Sum_probs=110.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||++........    ....++..|++||.+.+..++.++|
T Consensus       111 ~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~----~~~~~~~~~~~Pe~~~~~~~~~~~D  183 (256)
T cd08530         111 QLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA----KTQIGTPHYMAPEVWKGRPYSYKSD  183 (256)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc----ccccCCccccCHHHHCCCCCCchhh
Confidence            5789999999   89999999999999999999999999999876654311    1133678899999998888888999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|++++++++|..||......  ....             .......+........++.+++.+||+.+|++|||+.
T Consensus       184 ~~slG~~~~~l~~g~~p~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (256)
T cd08530         184 IWSLGCLLYEMATFAPPFEARSMQ--DLRY-------------KVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCD  248 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH--HHHH-------------HHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHH
Confidence            999999999999999999654311  1111             0111222222234456788999999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       249 ~~l~  252 (256)
T cd08530         249 KILA  252 (256)
T ss_pred             HHhc
Confidence            9875


No 261
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93  E-value=7.9e-26  Score=170.07  Aligned_cols=150  Identities=22%  Similarity=0.360  Sum_probs=108.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||||.||+++.++.++++|||.+....... ........++..|++||...+..++.++|
T Consensus       125 ~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  200 (275)
T cd05046         125 QIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSD  200 (275)
T ss_pred             HHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhh
Confidence            5889999999   8999999999999999999999999999876443211 11111223466799999988888889999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++|++++ |..||.....  ........   .  ...    ....+   ......+.+++.+||..+|.+|||+
T Consensus       201 i~slG~~l~~l~~~~~~p~~~~~~--~~~~~~~~---~--~~~----~~~~~---~~~~~~l~~~i~~~l~~~p~~Rp~~  266 (275)
T cd05046         201 VWSFGVLMWEVFTQGELPFYGLSD--EEVLNRLQ---A--GKL----ELPVP---EGCPSRLYKLMTRCWAVNPKDRPSF  266 (275)
T ss_pred             HHHHHHHHHHHHhCCCCCccccch--HHHHHHHH---c--CCc----CCCCC---CCCCHHHHHHHHHHcCCCcccCCCH
Confidence            9999999999998 7788854321  11111110   0  000    00011   1123467889999999999999999


Q ss_pred             HHHHHHHHh
Q 047677          160 RSVVQMLEE  168 (200)
Q Consensus       160 ~~il~~L~~  168 (200)
                      .++++.|.+
T Consensus       267 ~~~l~~l~~  275 (275)
T cd05046         267 SELVSALGE  275 (275)
T ss_pred             HHHHHHhcC
Confidence            999998863


No 262
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.93  E-value=4.6e-26  Score=178.39  Aligned_cols=149  Identities=25%  Similarity=0.358  Sum_probs=103.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC----CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK----VD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~----~~   76 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++......... ......|++.|+|||++.+..    ++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~  225 (371)
T cd05622         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  225 (371)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCC
Confidence            5789999999   899999999999999999999999999998765432211 112345899999999876532    67


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC-
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL-  155 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~-  155 (200)
                      .++|+|||||++|+|++|..||......  .....+   .....      ....+. .......+.+++.+|+..++.+ 
T Consensus       226 ~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i---~~~~~------~~~~~~-~~~~s~~~~~li~~~L~~~~~r~  293 (371)
T cd05622         226 RECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKI---MNHKN------SLTFPD-DNDISKEAKNLICAFLTDREVRL  293 (371)
T ss_pred             CccceeehhHHHHHHHhCCCCCCCCCHH--HHHHHH---HcCCC------cccCCC-cCCCCHHHHHHHHHHcCChhhhc
Confidence            8999999999999999999999743211  000000   00000      001111 1123446677888999844433 


Q ss_pred             -CCCHHHHHHH
Q 047677          156 -RPTMRSVVQM  165 (200)
Q Consensus       156 -Rpt~~~il~~  165 (200)
                       |+++.++++.
T Consensus       294 ~r~~~~ei~~h  304 (371)
T cd05622         294 GRNGVEEIKRH  304 (371)
T ss_pred             CCCCHHHHhcC
Confidence             7788888775


No 263
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93  E-value=1e-25  Score=169.93  Aligned_cols=158  Identities=22%  Similarity=0.303  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.......  .......++..|.+||...+. .++.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~  180 (283)
T cd05118         106 QLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchh
Confidence            5789999999   8999999999999999999999999999987665432  111123467789999988766 678899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhh------------hhc---cCCCCCchHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVL------------TLV---DSSIPETFKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~~~~l  144 (200)
                      |+||+|+++|++++|+.||......+ .................            ...   ..............+.++
T Consensus       181 Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (283)
T cd05118         181 DIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDL  259 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHH
Confidence            99999999999999999986543211 11111100000000000            000   000011122345678899


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||+.||.+||++.+++.
T Consensus       260 i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         260 LSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHhccCcccCcCHHHHhh
Confidence            99999999999999999875


No 264
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93  E-value=2.2e-25  Score=168.48  Aligned_cols=157  Identities=24%  Similarity=0.250  Sum_probs=109.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.........   ....++..|++||...+..++.++|
T Consensus       115 ~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~D  188 (287)
T cd07838         115 QLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVD  188 (287)
T ss_pred             HHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc---ccccccccccChHHhccCCCCCcch
Confidence            5889999999   789999999999999999999999999998765432211   1123577899999998888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc-hh-------hhhccCCC----CCchHHHHHHHHHHHHHh
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ-SV-------LTLVDSSI----PETFKENAVEILRIAVLC  148 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~----~~~~~~~~~~~~~li~~c  148 (200)
                      +|||||++|++++|..||...... ............... ..       ........    ..........+.+++.+|
T Consensus       189 i~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  267 (287)
T cd07838         189 MWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKM  267 (287)
T ss_pred             hhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHH
Confidence            999999999999999888753322 111111110000000 00       00000000    111223346678899999


Q ss_pred             cCCCCCCCCCHHHHHH
Q 047677          149 TTTQPALRPTMRSVVQ  164 (200)
Q Consensus       149 l~~dp~~Rpt~~~il~  164 (200)
                      |+.||.+||++.+++.
T Consensus       268 l~~dp~~Rp~~~~il~  283 (287)
T cd07838         268 LTFNPHKRISAFEALQ  283 (287)
T ss_pred             hccCCccCCCHHHHhc
Confidence            9999999999999874


No 265
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.93  E-value=1.2e-25  Score=170.58  Aligned_cols=159  Identities=18%  Similarity=0.241  Sum_probs=106.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++..........  ....++..|++||.+.+. .++.++
T Consensus       111 qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  185 (291)
T cd07870         111 QLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY--SSEVVTLWYRPPDVLLGATDYSSAL  185 (291)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC--CCccccccccCCceeecCCCCCcHH
Confidence            5789999999   8899999999999999999999999999886543321111  112357889999988653 477889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc----------hhh-hhccCCCCCch------HHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ----------SVL-TLVDSSIPETF------KENAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~------~~~~~~~~  142 (200)
                      |+||||+++|++++|..||.........+............          ... .......+...      ......+.
T Consensus       186 Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (291)
T cd07870         186 DIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAE  265 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHH
Confidence            99999999999999999997543322211111100000000          000 00000000000      01134677


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+|+..||.+|||+.+++.
T Consensus       266 ~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         266 DLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHHhCcCcccCcCHHHHhc
Confidence            8999999999999999999864


No 266
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93  E-value=2.3e-25  Score=170.68  Aligned_cols=161  Identities=23%  Similarity=0.319  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-----ceeeeecccccccccccccCC--
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-----DTTHVIAGTTGYIAPEYGYTS--   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~pE~~~~~--   73 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++++||+.+.........     .......++..|++||++...  
T Consensus       109 ~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (314)
T cd08216         109 DVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQ  185 (314)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCC
Confidence            6889999999   899999999999999999999999999988655332111     011122356789999987653  


Q ss_pred             CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc---ccch-------hhh----hc-----cCCCCCch
Q 047677           74 KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN---SKQS-------VLT----LV-----DSSIPETF  134 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~-------~~~----~~-----~~~~~~~~  134 (200)
                      .++.++|+||+||++|++++|..||........... .......   ....       ...    ..     ........
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLE-KVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYT  264 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchh
Confidence            478899999999999999999999975432211111 0000000   0000       000    00     00001112


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          135 KENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       135 ~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ......+.+++.+||+.||++|||+.++++.
T Consensus       265 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         265 RTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             hHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            2334568889999999999999999999864


No 267
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.92  E-value=9.1e-26  Score=167.06  Aligned_cols=145  Identities=29%  Similarity=0.424  Sum_probs=107.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+........   .....++..|++||...+...+.++|
T Consensus       106 ~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~D  179 (253)
T cd05122         106 ELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKAD  179 (253)
T ss_pred             HHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCcccc
Confidence            5789999999   79999999999999999999999999999876554321   12234678899999988877889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||++++++++|..||.........  ....          .......+. .......+.+++.+||+.||.+|||+.
T Consensus       180 v~slG~il~~l~~g~~p~~~~~~~~~~--~~~~----------~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~t~~  246 (253)
T cd05122         180 IWSLGITAIELAEGKPPYSELPPMKAL--FKIA----------TNGPPGLRN-PEKWSDEFKDFLKKCLQKNPEKRPTAE  246 (253)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCchHHHH--HHHH----------hcCCCCcCc-ccccCHHHHHHHHHHccCChhhCCCHH
Confidence            999999999999999998754211110  0000          000011111 111134688899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       247 ~~l~  250 (253)
T cd05122         247 QLLK  250 (253)
T ss_pred             HHhc
Confidence            9875


No 268
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92  E-value=5.5e-26  Score=175.77  Aligned_cols=165  Identities=24%  Similarity=0.331  Sum_probs=110.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc-eeeeecccccccccccccC-CCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD-TTHVIAGTTGYIAPEYGYT-SKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~-~~~~~~   78 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+ ..++.+
T Consensus       114 ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (336)
T cd07849         114 QILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKA  190 (336)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcH
Confidence            5789999999   8999999999999999999999999999987654322111 1112346888999998654 457889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc--cchhh-----------hhccCCCCCc----hHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS--KQSVL-----------TLVDSSIPET----FKENAVEI  141 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~~----~~~~~~~~  141 (200)
                      +|+||+|+++|++++|+.||......  ............  .....           ..........    .......+
T Consensus       191 ~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
T cd07849         191 IDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKA  268 (336)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHH
Confidence            99999999999999999999643211  111100000000  00000           0000000000    11224568


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH--HHhhC
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQM--LEEAE  170 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~~--L~~~~  170 (200)
                      .+++.+||+.||.+|||+.++++.  |+...
T Consensus       269 ~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         269 LDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            899999999999999999999886  54443


No 269
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.92  E-value=7.4e-26  Score=170.98  Aligned_cols=158  Identities=22%  Similarity=0.245  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|++||...+.. ++.++
T Consensus       108 ~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (284)
T cd07860         108 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAV  182 (284)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHH
Confidence            5789999999   89999999999999999999999999999865433211  111123567899999876654 57889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchh----------hhhccCCCCCc----hHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSV----------LTLVDSSIPET----FKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~~~li  145 (200)
                      |+||||+++|++++|..||....... ................          ...........    .......+.+++
T Consensus       183 Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  261 (284)
T cd07860         183 DIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLL  261 (284)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHH
Confidence            99999999999999999996543211 1111111110000000          00000000000    111234577899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||+.||.+|||+++++.
T Consensus       262 ~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         262 SQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHhcCCCcccCCCHHHHhc
Confidence            9999999999999999875


No 270
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.92  E-value=1.2e-25  Score=169.63  Aligned_cols=155  Identities=23%  Similarity=0.295  Sum_probs=106.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++. +.++|+|||.+..........   ...++..|++||.... ..++.++
T Consensus       108 qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  180 (282)
T cd07831         108 QLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT---EYISTRWYRAPECLLTDGYYGPKM  180 (282)
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC---CCCCCcccCChhHhhcCCCCCcch
Confidence            5889999999   899999999999999999 999999999987654322111   1346788999997654 4467899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc-cchhhhh------ccCCCCC--------chHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS-KQSVLTL------VDSSIPE--------TFKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~--------~~~~~~~~~~~l  144 (200)
                      |+||+||++|++++|..||......+  ........... .......      .....+.        ........+.++
T Consensus       181 Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  258 (282)
T cd07831         181 DIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDL  258 (282)
T ss_pred             hHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHH
Confidence            99999999999999999996543211  11111100000 0000000      0000110        011234678899


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||+.+|++|||+.++++
T Consensus       259 i~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         259 LKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHhccCcccccCHHHHhh
Confidence            99999999999999999875


No 271
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92  E-value=8.8e-26  Score=191.78  Aligned_cols=144  Identities=19%  Similarity=0.256  Sum_probs=97.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-------------------CeeecccccceeeccCCC----------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-------------------KPRIADFGLARIVQSNGG----------   51 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-------------------~~~l~df~~~~~~~~~~~----------   51 (200)
                      ||++||+|||   ++||+||||||+||+++..+                   .++++|||++........          
T Consensus        88 qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~  164 (793)
T PLN00181         88 QIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVK  164 (793)
T ss_pred             HHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccc
Confidence            6899999999   89999999999999996544                   455566665543211000          


Q ss_pred             -c---ceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhcc
Q 047677           52 -K---DTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVD  127 (200)
Q Consensus        52 -~---~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (200)
                       .   .......+++.|+|||++.+..++.++|||||||++|||++|..|+.....   ..... .         .    
T Consensus       165 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~-~---------~----  227 (793)
T PLN00181        165 KQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSL-R---------H----  227 (793)
T ss_pred             cCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHH-H---------H----
Confidence             0   000112467889999999988899999999999999999998877642110   00000 0         0    


Q ss_pred             CCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          128 SSIPETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       128 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ...+............++.+||+.+|.+|||+.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        228 RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            0011111122334567888999999999999999976


No 272
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92  E-value=6.3e-26  Score=171.28  Aligned_cols=158  Identities=23%  Similarity=0.289  Sum_probs=106.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|++||++.+. .++.++
T Consensus       107 ~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~  181 (283)
T cd07835         107 QLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPV  181 (283)
T ss_pred             HHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHH
Confidence            5789999999   78999999999999999999999999999865432211  11112357789999987664 468899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc----------hhhhhcc----CCCCCchHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ----------SVLTLVD----SSIPETFKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~li  145 (200)
                      |+||||+++|++++|..||....... ..............          .......    .............+.+++
T Consensus       182 Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  260 (283)
T cd07835         182 DIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLL  260 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHH
Confidence            99999999999999999996543211 11111110000000          0000000    000011112234678899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||+.||.+|||++++++
T Consensus       261 ~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         261 SKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHhcCChhhCcCHHHHhc
Confidence            9999999999999999875


No 273
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.92  E-value=1.3e-25  Score=170.46  Aligned_cols=158  Identities=24%  Similarity=0.252  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||++.........  .....++..|++||.+.+.. ++.++
T Consensus       114 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  188 (293)
T cd07843         114 QLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP--YTQLVVTLWYRAPELLLGAKEYSTAI  188 (293)
T ss_pred             HHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc--cccccccccccCchhhcCCccccchh
Confidence            6889999999   899999999999999999999999999998766543211  11233678899999887644 57889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc--------------cc-chhhhhccCCCCCchHH--HHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN--------------SK-QSVLTLVDSSIPETFKE--NAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~--~~~~~~  142 (200)
                      |+||+|+++|++++|..||........ ..........              .. .................  ....+.
T Consensus       189 Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (293)
T cd07843         189 DMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGF  267 (293)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHH
Confidence            999999999999999999975432211 1100000000              00 00000000000011111  245677


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+||+.||++|||+.+++.
T Consensus       268 ~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         268 DLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHHHhccCccccCCHHHHhc
Confidence            8999999999999999999875


No 274
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.92  E-value=6.9e-26  Score=177.01  Aligned_cols=98  Identities=30%  Similarity=0.491  Sum_probs=81.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc----------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK----------------------------   52 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~----------------------------   52 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++.........                            
T Consensus       109 qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (363)
T cd05628         109 ETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETW  185 (363)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchh
Confidence            5789999999   899999999999999999999999999998654321000                            


Q ss_pred             -----ceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCC
Q 047677           53 -----DTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPE  101 (200)
Q Consensus        53 -----~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~  101 (200)
                           .......|++.|+|||++.+..++.++|+|||||++|+|++|..||...
T Consensus       186 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         186 KRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             hhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence                 0011235899999999998888999999999999999999999999753


No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.92  E-value=1.6e-25  Score=168.23  Aligned_cols=150  Identities=29%  Similarity=0.447  Sum_probs=106.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC--CCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK--VDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~--~~~~   78 (200)
                      |+++||.|||   ++|++|+||+|+||+++.++.++++|||.+................++..|++||......  ++.+
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  192 (272)
T cd06629         116 QVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAK  192 (272)
T ss_pred             HHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCcc
Confidence            5789999999   7999999999999999999999999999986544321111112234678899999876654  7889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +|+||||+++|++++|..||........    ... ... ..     .....+.. .......+.+++.+||+.+|.+||
T Consensus       193 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~-~~~-~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  261 (272)
T cd06629         193 VDIWSLGCVVLEMFAGRRPWSDEEAIAA----MFK-LGN-KR-----SAPPIPPDVSMNLSPVALDFLNACFTINPDNRP  261 (272)
T ss_pred             chhHHHHHHHHHHHhCCCCCcCcchHHH----HHH-hhc-cc-----cCCcCCccccccCCHHHHHHHHHHhcCChhhCC
Confidence            9999999999999999999863321110    000 000 00     00111111 122345778899999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      |+.++++
T Consensus       262 s~~~il~  268 (272)
T cd06629         262 TARELLQ  268 (272)
T ss_pred             CHHHHhh
Confidence            9999876


No 276
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92  E-value=1.8e-25  Score=166.98  Aligned_cols=148  Identities=29%  Similarity=0.499  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++|++|||   + .|++|+||+|+||+++.++.++|+|||.+..........  ....++..|++||.+....++.++
T Consensus       107 ~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~  181 (264)
T cd06623         107 QILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAA  181 (264)
T ss_pred             HHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchh
Confidence            5789999999   7 999999999999999999999999999987664332221  123367889999998888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHH-HHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKE-NAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++|++++|..||......  .......          .......+..... ....+.+++.+||..+|.+|||
T Consensus       182 Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~  249 (264)
T cd06623         182 DIWSLGLTLLECALGKFPFLPPGQP--SFFELMQ----------AICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPS  249 (264)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccccc--CHHHHHH----------HHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCC
Confidence            9999999999999999999765421  1111111          0011111111222 3457888999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      +.++++.
T Consensus       250 ~~~ll~~  256 (264)
T cd06623         250 AAELLQH  256 (264)
T ss_pred             HHHHHhC
Confidence            9999874


No 277
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.92  E-value=2.4e-25  Score=167.08  Aligned_cols=143  Identities=24%  Similarity=0.336  Sum_probs=107.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-CeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||.|||   +.|++|+||+|.||++..++ .++++|||++.......      ...++..|+|||++.+..++.++
T Consensus       117 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  187 (267)
T PHA03390        117 QLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSF  187 (267)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchh
Confidence            6889999999   89999999999999999888 99999999987654321      12367889999999888889999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC-
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT-  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-  158 (200)
                      |+||+|+++|++++|..||............+..           .. .............+.+++.+||+.+|.+||+ 
T Consensus       188 DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  255 (267)
T PHA03390        188 DWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK-----------RQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTN  255 (267)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH-----------hh-cccCCcccccCHHHHHHHHHHhccChhhCCch
Confidence            9999999999999999999744332211111111           00 0111112234457888999999999999996 


Q ss_pred             HHHHHH
Q 047677          159 MRSVVQ  164 (200)
Q Consensus       159 ~~~il~  164 (200)
                      ++++++
T Consensus       256 ~~~~l~  261 (267)
T PHA03390        256 YNEIIK  261 (267)
T ss_pred             HHHHhc
Confidence            588864


No 278
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.92  E-value=1.6e-26  Score=181.37  Aligned_cols=149  Identities=25%  Similarity=0.316  Sum_probs=103.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCC------------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNG------------------------------   50 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~------------------------------   50 (200)
                      |++.||+|||   ++||+||||||+||+++.++.++|+|||++..+....                              
T Consensus       109 qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (376)
T cd05598         109 ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRL  185 (376)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccc
Confidence            5889999999   8999999999999999999999999999874321000                              


Q ss_pred             -----------CcceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhccc
Q 047677           51 -----------GKDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSK  119 (200)
Q Consensus        51 -----------~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  119 (200)
                                 .........|++.|+|||++.+..++.++|+|||||++|+|++|..||........  ...+.   ...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i~---~~~  260 (376)
T cd05598         186 KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAET--QLKVI---NWE  260 (376)
T ss_pred             cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHH--HHHHh---ccC
Confidence                       00001123588999999999888899999999999999999999999975432111  00000   000


Q ss_pred             chhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---CHHHHHHH
Q 047677          120 QSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---TMRSVVQM  165 (200)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---t~~~il~~  165 (200)
                      ..      ...+. .......+.+++.+|+ .+|.+|+   |+.++++.
T Consensus       261 ~~------~~~~~-~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         261 TT------LHIPS-QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             cc------ccCCC-CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            00      00111 1112335566777766 5999999   88888754


No 279
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.92  E-value=1.4e-25  Score=168.90  Aligned_cols=145  Identities=23%  Similarity=0.406  Sum_probs=106.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||.+... .++.++
T Consensus       109 ~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (277)
T cd06917         109 EVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKA  183 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccch
Confidence            5789999999   89999999999999999999999999999877654321  11223478889999987654 468899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||||+++|++++|..||.......     ...       .......+..+..  .....+.+++.+||+.||++||++
T Consensus       184 Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~-------~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~~p~~R~~~  249 (277)
T cd06917         184 DIWSLGITIYEMATGNPPYSDVDAFR-----AMM-------LIPKSKPPRLEDN--GYSKLLREFVAACLDEEPKERLSA  249 (277)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChhh-----hhh-------ccccCCCCCCCcc--cCCHHHHHHHHHHcCCCcccCcCH
Confidence            99999999999999999996432110     000       0000000111111  133468889999999999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .+++.
T Consensus       250 ~~il~  254 (277)
T cd06917         250 EELLK  254 (277)
T ss_pred             HHHhh
Confidence            99976


No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.92  E-value=1.4e-25  Score=166.81  Aligned_cols=143  Identities=26%  Similarity=0.472  Sum_probs=105.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.+ +.++|+|||.+.........   ....++..|++||...+..++.++
T Consensus       109 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  182 (256)
T cd08220         109 QILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKA---YTVVGTPCYISPELCEGKPYNQKS  182 (256)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccc---cccccCCcccCchhccCCCCCccc
Confidence            5789999999   8999999999999999765 45799999998766433211   123467889999999888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||||+++|++++|..||......  ......             ...............+.+++.+||..+|.+|||+
T Consensus       183 Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  247 (256)
T cd08220         183 DIWALGCVLYELASLKRAFEAANLP--ALVLKI-------------MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQL  247 (256)
T ss_pred             chHHHHHHHHHHHhCCCCcccCchH--HHHHHH-------------HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCH
Confidence            9999999999999999998643221  111110             0111111111234467889999999999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .++++
T Consensus       248 ~~ll~  252 (256)
T cd08220         248 SQIMA  252 (256)
T ss_pred             HHHhh
Confidence            99975


No 281
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.92  E-value=9.6e-26  Score=172.96  Aligned_cols=147  Identities=22%  Similarity=0.321  Sum_probs=106.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc---------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD---------------------------   53 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~---------------------------   53 (200)
                      |+++||+|||   +.|++|+||||+||+++.++.++|+|||++..........                           
T Consensus       111 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (316)
T cd05574         111 EVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSF  187 (316)
T ss_pred             HHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccC
Confidence            5889999999   8999999999999999999999999999876543221100                           


Q ss_pred             eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc
Q 047677           54 TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET  133 (200)
Q Consensus        54 ~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (200)
                      ......|+..|++||+..+..++.++|+||||+++|++++|..||........ +..    ....        ....+. 
T Consensus       188 ~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~----~~~~--------~~~~~~-  253 (316)
T cd05574         188 RSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET-FSN----ILKK--------EVTFPG-  253 (316)
T ss_pred             CCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH-HHH----HhcC--------CccCCC-
Confidence            01122467889999999888889999999999999999999999964432211 000    0000        001111 


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCC----HHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPT----MRSVVQ  164 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt----~~~il~  164 (200)
                      .......+.+++.+||+.||++|||    +.+++.
T Consensus       254 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         254 SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            1113457889999999999999999    666665


No 282
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92  E-value=1.7e-25  Score=173.13  Aligned_cols=161  Identities=26%  Similarity=0.324  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc---ceeeeecccccccccccccC-CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK---DTTHVIAGTTGYIAPEYGYT-SKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~~pE~~~~-~~~~   76 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||++.........   .......++..|++||.+.+ ..++
T Consensus       115 qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (337)
T cd07852         115 QLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYT  191 (337)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecccccc
Confidence            5789999999   899999999999999999999999999998765433211   11122347888999998765 4477


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc------------ccchhhhhccC----CCCCchHHHHHH
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN------------SKQSVLTLVDS----SIPETFKENAVE  140 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~----~~~~~~~~~~~~  140 (200)
                      .++|+||||+++|++++|+.||........ ..........            ...........    ............
T Consensus       192 ~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (337)
T cd07852         192 KGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDD  270 (337)
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHH
Confidence            899999999999999999999964322211 1100000000            00000000000    000111123457


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          141 ILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       141 ~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      +.+++.+||+.||.+|||+.++++.
T Consensus       271 l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         271 ALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHHhccCCcccccCHHHHhhC
Confidence            8899999999999999999999875


No 283
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.92  E-value=2.7e-25  Score=167.73  Aligned_cols=145  Identities=30%  Similarity=0.478  Sum_probs=105.3

Q ss_pred             ChhhhhhhhhcCCCC-CeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC----CCC
Q 047677            1 GAAKGLEYLHHGCAR-PVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT----SKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~-gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~----~~~   75 (200)
                      |++.||+|||   ++ +++|+||||+||+++.++.++|+|||.+.......   ......++..|++||.+.+    ..+
T Consensus       111 qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~  184 (283)
T cd06617         111 SIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGY  184 (283)
T ss_pred             HHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc---ccccccCCccccChhhcCCccccccc
Confidence            6889999999   66 99999999999999999999999999987653221   1111336788999998764    345


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||..............           .......+.  ......+.+++.+||..+|.+
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~  251 (283)
T cd06617         185 DVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-----------EEPSPQLPA--EKFSPEFQDFVNKCLKKNYKE  251 (283)
T ss_pred             CccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-----------hcCCCCCCc--cccCHHHHHHHHHHccCChhh
Confidence            7889999999999999999999964332211111100           000111111  112346888999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.++++
T Consensus       252 Rp~~~~il~  260 (283)
T cd06617         252 RPNYPELLQ  260 (283)
T ss_pred             CcCHHHHhc
Confidence            999999976


No 284
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.92  E-value=8.8e-26  Score=172.42  Aligned_cols=155  Identities=23%  Similarity=0.315  Sum_probs=110.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-------------ceeeeeccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-------------DTTHVIAGTTGYIAP   67 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-------------~~~~~~~~~~~~~~p   67 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||.+.........             .......++..|++|
T Consensus       109 ~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  185 (305)
T cd05609         109 ETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP  185 (305)
T ss_pred             HHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCc
Confidence            5789999999   899999999999999999999999999987532111000             000112467789999


Q ss_pred             ccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHH
Q 047677           68 EYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVL  147 (200)
Q Consensus        68 E~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  147 (200)
                      |.+.+..++.++|+|||||++|++++|..||.....  ........   .        .....+.........+.+++.+
T Consensus       186 E~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~li~~  252 (305)
T cd05609         186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELFGQVI---S--------DDIEWPEGDEALPADAQDLISR  252 (305)
T ss_pred             hhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---h--------cccCCCCccccCCHHHHHHHHH
Confidence            998888889999999999999999999999964321  11111000   0        0001111111233467889999


Q ss_pred             hcCCCCCCCCCHHHHHHHHHhhCC
Q 047677          148 CTTTQPALRPTMRSVVQMLEEAEP  171 (200)
Q Consensus       148 cl~~dp~~Rpt~~~il~~L~~~~~  171 (200)
                      ||+.||++||+..++.+.|+...-
T Consensus       253 ~l~~~P~~R~~~~~~~~ll~~~~~  276 (305)
T cd05609         253 LLRQNPLERLGTGGAFEVKQHRFF  276 (305)
T ss_pred             HhccChhhccCccCHHHHHhCccc
Confidence            999999999998888888877543


No 285
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.92  E-value=3.7e-26  Score=177.25  Aligned_cols=138  Identities=26%  Similarity=0.412  Sum_probs=98.7

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccC---------------------CCcc--------
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSN---------------------GGKD--------   53 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~---------------------~~~~--------   53 (200)
                      +-||..||   +.|++||||||+|+||+..|.+||+|||++..+...                     ....        
T Consensus       251 vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (550)
T KOG0605|consen  251 VLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRST  327 (550)
T ss_pred             HHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccch
Confidence            34666777   999999999999999999999999999998433210                     0000        


Q ss_pred             ----------------eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCc--hhHHHHHHHh
Q 047677           54 ----------------TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGEN--KDIVRWVCSH  115 (200)
Q Consensus        54 ----------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~--~~~~~~~~~~  115 (200)
                                      .....+||+.|+|||++.+.+|....|.|||||++||++.|.+||.......  ..+..|-.  
T Consensus       328 ~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~--  405 (550)
T KOG0605|consen  328 MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE--  405 (550)
T ss_pred             hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh--
Confidence                            0123469999999999999999999999999999999999999998654321  11111111  


Q ss_pred             hcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677          116 FNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                           .+      ..|.. .....+..+||.+|+. ||++|.-
T Consensus       406 -----~l------~fP~~-~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  406 -----TL------KFPEE-VDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             -----hc------cCCCc-CcccHHHHHHHHHHhc-CHHHhcC
Confidence                 00      01111 1111466778889988 9999986


No 286
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.92  E-value=2.1e-25  Score=169.07  Aligned_cols=159  Identities=20%  Similarity=0.267  Sum_probs=105.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||.|||   ++|++|+||+|+||+++.++.++|+|||++.........  .....++..|+|||...+ ..++.++
T Consensus       111 ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  185 (291)
T cd07844         111 QLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT--YSNEVVTLWYRPPDVLLGSTEYSTSL  185 (291)
T ss_pred             HHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc--ccccccccccCCcHHhhcCcccCcHH
Confidence            5889999999   899999999999999999999999999988654321111  111225678999998765 3478899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhh-------hhcc---CCCC-Cc----hHH--HHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVL-------TLVD---SSIP-ET----FKE--NAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~-~~----~~~--~~~~~~  142 (200)
                      |+||+|+++|++++|..||.........................       ....   .... ..    ...  ....+.
T Consensus       186 Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (291)
T cd07844         186 DMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGE  265 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHH
Confidence            99999999999999999996543222211111110000000000       0000   0000 00    000  114667


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+||+.+|.+|||+.++++
T Consensus       266 ~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         266 ELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHHHhccCcccccCHHHHhc
Confidence            8999999999999999999875


No 287
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.92  E-value=5.8e-26  Score=173.40  Aligned_cols=141  Identities=30%  Similarity=0.404  Sum_probs=105.8

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+-||+.||   +.+||+||+||+||+++..|.+.|+|+|++..+.....   .....||.+|+|||++....|+.+.|.
T Consensus       296 i~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dw  369 (591)
T KOG0986|consen  296 IICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDW  369 (591)
T ss_pred             HHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccH
Confidence            566888888   89999999999999999999999999999988765432   223368999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      ||+||++|+|+.|+.||.........  .       .-..........++..+.+++..   ++...|+.||.+|.-.+
T Consensus       370 f~lGCllYemi~G~sPFr~~KeKvk~--e-------Evdrr~~~~~~ey~~kFS~eaks---lc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  370 FSLGCLLYEMIAGHSPFRQRKEKVKR--E-------EVDRRTLEDPEEYSDKFSEEAKS---LCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHHhHHHHHHcccCchhhhhhhhhH--H-------HHHHHHhcchhhcccccCHHHHH---HHHHHHccCHHHhccCC
Confidence            99999999999999999754332110  0       00111111123444445555444   55588899999997543


No 288
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.92  E-value=4.9e-26  Score=178.64  Aligned_cols=149  Identities=24%  Similarity=0.333  Sum_probs=103.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC------------cc---------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG------------KD---------------   53 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~------------~~---------------   53 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++........            ..               
T Consensus       109 ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (377)
T cd05629         109 ECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSIN  185 (377)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence            6889999999   89999999999999999999999999998853221000            00               


Q ss_pred             ------------------eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 047677           54 ------------------TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSH  115 (200)
Q Consensus        54 ------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  115 (200)
                                        ......|++.|+|||++.+..++.++|+|||||++|++++|..||......  .....+.  
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~--  261 (377)
T cd05629         186 LTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH--ETYRKII--  261 (377)
T ss_pred             ccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH--HHHHHHH--
Confidence                              000134888999999998888999999999999999999999999653321  1111010  


Q ss_pred             hcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC---CCHHHHHHH
Q 047677          116 FNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR---PTMRSVVQM  165 (200)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R---pt~~~il~~  165 (200)
                       ....      ...++.. ......+.+++.+|+. +|.+|   +|+.+++..
T Consensus       262 -~~~~------~~~~p~~-~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         262 -NWRE------TLYFPDD-IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             -ccCC------ccCCCCC-CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence             0000      0011111 1123456778889997 66665   588888764


No 289
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.92  E-value=1.3e-25  Score=171.46  Aligned_cols=159  Identities=20%  Similarity=0.256  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc--ceeeeecccccccccccccCCC-CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK--DTTHVIAGTTGYIAPEYGYTSK-VDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~~pE~~~~~~-~~~   77 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+.........  .......++..|+|||.+.+.. ++.
T Consensus       127 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  203 (310)
T cd07865         127 MLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGP  203 (310)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCc
Confidence            6899999999   789999999999999999999999999998765432211  1111234577899999876643 678


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc-cch-------hhhhccCCCCCc----------hHHHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS-KQS-------VLTLVDSSIPET----------FKENAV  139 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~----------~~~~~~  139 (200)
                      ++|+||||+++|++++|..||......  .....+...... ...       .........+..          ......
T Consensus       204 ~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (310)
T cd07865         204 PIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDP  281 (310)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCH
Confidence            899999999999999999998653321  111111100000 000       000000000000          001123


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          140 EILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       140 ~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+.+++.+||..||.+|||++++++
T Consensus       282 ~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         282 HALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHHHHHHHHhcCChhhccCHHHHhc
Confidence            5678999999999999999999875


No 290
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.92  E-value=1.3e-25  Score=167.08  Aligned_cols=144  Identities=29%  Similarity=0.466  Sum_probs=107.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+.......   ......++..|++||...... ++.++
T Consensus       110 ~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~  183 (258)
T cd06632         110 QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAA  183 (258)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchh
Confidence            5789999999   8999999999999999999999999999987654332   112234678899999887666 88899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||||+++|++++|..||....... .....    ..         ....+.........+.+++.+||+.+|.+||++
T Consensus       184 D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~----~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  249 (258)
T cd06632         184 DIWSLGCTVLEMATGKPPWSQLEGVA-AVFKI----GR---------SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTA  249 (258)
T ss_pred             hhHHHHHHHHHHHhCCCCcccCcHHH-HHHHH----Hh---------cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCH
Confidence            99999999999999999996543111 00000    00         001111112223467788999999999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .+++.
T Consensus       250 ~~~l~  254 (258)
T cd06632         250 AELLE  254 (258)
T ss_pred             HHHhc
Confidence            99875


No 291
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.92  E-value=1.8e-25  Score=168.28  Aligned_cols=141  Identities=26%  Similarity=0.426  Sum_probs=102.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-------CeeecccccceeeccCCCcceeeeecccccccccccccC-
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-------KPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-   72 (200)
                      |+++||+|||   ++|++||||||.||+++..+       .++++|||.+.......      ...++..|++||.+.+ 
T Consensus       125 qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------~~~~~~~~~aPe~~~~~  195 (274)
T cd05076         125 QLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE------ERVERIPWIAPECVPGG  195 (274)
T ss_pred             HHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc------ccccCCcccCchhhcCC
Confidence            6899999999   89999999999999997543       37899999875432211      1235678999998765 


Q ss_pred             CCCCCccchhhHhHHHHHHH-hCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCC
Q 047677           73 SKVDEKSDVYSFGVVLMELV-TGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTT  151 (200)
Q Consensus        73 ~~~~~~~Di~slG~~~~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  151 (200)
                      ..++.++|+||||+++|+++ +|..||.......  ......            .....+..   ....+.+++.+||+.
T Consensus       196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~------------~~~~~~~~---~~~~~~~li~~cl~~  258 (274)
T cd05076         196 NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERFYE------------KKHRLPEP---SCKELATLISQCLTY  258 (274)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHHHH------------hccCCCCC---CChHHHHHHHHHccc
Confidence            45789999999999999985 6888886442211  111100            00111111   123678899999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 047677          152 QPALRPTMRSVVQMLE  167 (200)
Q Consensus       152 dp~~Rpt~~~il~~L~  167 (200)
                      +|++|||+.++++.|.
T Consensus       259 ~p~~Rps~~~il~~L~  274 (274)
T cd05076         259 EPTQRPSFRTILRDLT  274 (274)
T ss_pred             ChhhCcCHHHHHHhhC
Confidence            9999999999998763


No 292
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92  E-value=1.4e-25  Score=170.42  Aligned_cols=158  Identities=20%  Similarity=0.196  Sum_probs=105.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~   78 (200)
                      |+++||+|||   ++|++|+||+|+||+++. ++.++|+|||.+..........  ....+++.|+|||++.+ ..++.+
T Consensus       118 qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~  192 (295)
T cd07837         118 QLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY--THEIVTLWYRAPEVLLGSTHYSTP  192 (295)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCcccc--CCcccccCCCChHHhhCCCCCCch
Confidence            6889999999   899999999999999998 8899999999987543221111  11235778999998765 346889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhh-h------c-cCCCCC-c----hHHHHHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLT-L------V-DSSIPE-T----FKENAVEILRIA  145 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~-~~~~~~-~----~~~~~~~~~~li  145 (200)
                      +|+||||+++|++++|..||....... .................. .      . .....+ .    .......+.+++
T Consensus       193 ~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  271 (295)
T cd07837         193 VDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLL  271 (295)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHH
Confidence            999999999999999999997532211 111111100000000000 0      0 000000 0    112345678899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||..||.+|||+.+++.
T Consensus       272 ~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         272 QKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHccCChhhcCCHHHHhc
Confidence            9999999999999999875


No 293
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.92  E-value=2.1e-25  Score=165.76  Aligned_cols=144  Identities=29%  Similarity=0.491  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||.+.......  .......++..|++||...+..++.++|
T Consensus       111 ~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~D  185 (258)
T cd08215         111 QLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSD  185 (258)
T ss_pred             HHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCcccc
Confidence            5789999999   7899999999999999999999999999987665432  1222234788899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|++++++++|..||.....  ......             ......+.........+.+++.+||..+|++|||+.
T Consensus       186 v~slG~~~~~l~~g~~p~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  250 (258)
T cd08215         186 IWSLGCVLYELCTLKHPFEGENL--LELALK-------------ILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIA  250 (258)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCcH--HHHHHH-------------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            99999999999999999864431  111110             011111111112334678899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       251 ~ll~  254 (258)
T cd08215         251 QILQ  254 (258)
T ss_pred             HHhc
Confidence            9875


No 294
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.92  E-value=3.2e-25  Score=168.68  Aligned_cols=158  Identities=26%  Similarity=0.357  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||++.........  .....++..|++||.+.+. .++.++
T Consensus       110 qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (298)
T cd07841         110 MTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK--MTHQVVTRWYRAPELLFGARHYGVGV  184 (298)
T ss_pred             HHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc--ccccccceeeeCHHHHhCCCCCCcHH
Confidence            6899999999   899999999999999999999999999998766443211  1112356789999987553 467899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhccc--c------hhhhhcc-CCCC-----CchHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSK--Q------SVLTLVD-SSIP-----ETFKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~-~~~~-----~~~~~~~~~~~~li  145 (200)
                      |+|||||++|++++|..+|....... ....... .....  .      ....... ...+     .........+.+++
T Consensus       185 Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  262 (298)
T cd07841         185 DMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFE-ALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLL  262 (298)
T ss_pred             HHHHHHHHHHHHHcCCccccCCccHH-HHHHHHH-HcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHH
Confidence            99999999999999977776433211 1111110 00000  0      0000000 0000     01122345788999


Q ss_pred             HHhcCCCCCCCCCHHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+||..||.+|||+.++++.
T Consensus       263 ~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         263 QRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHhcCCcccCcCHHHHhhC
Confidence            99999999999999999874


No 295
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92  E-value=4.5e-25  Score=168.64  Aligned_cols=142  Identities=30%  Similarity=0.441  Sum_probs=104.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |++.||.|||   +.|++|+||+|.||+++.++.++|+|||++.......      ...++..|++||.+.   ...++.
T Consensus       123 ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (307)
T cd06607         123 GALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN------SFVGTPYWMAPEVILAMDEGQYDG  193 (307)
T ss_pred             HHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC------CccCCccccCceeeeccCCCCCCc
Confidence            5889999999   8999999999999999999999999999886543221      123677899999874   345788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||||+++|++++|..||.......  .....   ..       .......  .......+.+++.+||..+|++||
T Consensus       194 ~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~~---~~-------~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp  259 (307)
T cd06607         194 KVDVWSLGITCIELAERKPPLFNMNAMS--ALYHI---AQ-------NDSPTLS--SNDWSDYFRNFVDSCLQKIPQDRP  259 (307)
T ss_pred             ccchHHHHHHHHHHHcCCCCCCCccHHH--HHHHH---hc-------CCCCCCC--chhhCHHHHHHHHHHhcCChhhCc
Confidence            9999999999999999999986432111  00000   00       0001111  122344688899999999999999


Q ss_pred             CHHHHHHH
Q 047677          158 TMRSVVQM  165 (200)
Q Consensus       158 t~~~il~~  165 (200)
                      ++.+++..
T Consensus       260 ~~~~il~~  267 (307)
T cd06607         260 SSEELLKH  267 (307)
T ss_pred             CHHHHhcC
Confidence            99999864


No 296
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.92  E-value=1.7e-25  Score=168.78  Aligned_cols=144  Identities=29%  Similarity=0.413  Sum_probs=106.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+.......    .....++..|++||...+. .++.++
T Consensus       105 ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  177 (278)
T cd05606         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSA  177 (278)
T ss_pred             HHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCccc
Confidence            5789999999   8999999999999999999999999999986543221    1123478899999998654 578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC--
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP--  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  157 (200)
                      |+||+|+++|++++|..||..............          ........+.   .....+.+++.+|+..+|.+||  
T Consensus       178 Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~----------~~~~~~~~~~---~~s~~~~~li~~~l~~~p~~R~~~  244 (278)
T cd05606         178 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM----------TLTMAVELPD---SFSPELRSLLEGLLQRDVNRRLGC  244 (278)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCCccchHHHHHH----------hhccCCCCCC---cCCHHHHHHHHHHhhcCHHhccCC
Confidence            999999999999999999975432221111000          0001112222   1245778888999999999999  


Q ss_pred             ---CHHHHHH
Q 047677          158 ---TMRSVVQ  164 (200)
Q Consensus       158 ---t~~~il~  164 (200)
                         ++.++++
T Consensus       245 ~~~~~~~ll~  254 (278)
T cd05606         245 LGRGAQEVKE  254 (278)
T ss_pred             CCCCHHHHHh
Confidence               9988875


No 297
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.92  E-value=2.4e-25  Score=170.32  Aligned_cols=158  Identities=27%  Similarity=0.324  Sum_probs=107.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   +.|++|+||+|+||+++..+.++|+|||.+..........  ....++..|+|||.+.+ ..++.++
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  190 (309)
T cd07845         116 QLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM--TPKVVTLWYRAPELLLGCTTYTTAI  190 (309)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC--CcccccccccChhhhcCCCCcCchH
Confidence            6889999999   8999999999999999999999999999987665332111  11224677999998765 4478899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhccc-chh------------hhhccCCCCC---chHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSK-QSV------------LTLVDSSIPE---TFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~---~~~~~~~~~~~  143 (200)
                      |+||+||++|++++|..||......  .....+....... ...            ..........   ........+.+
T Consensus       191 DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (309)
T cd07845         191 DMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLR  268 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHH
Confidence            9999999999999999999754321  1111111000000 000            0000000000   01112456778


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ++.+||+.||.+|||+.+++..
T Consensus       269 li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         269 LLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             HHHHHhcCChhhCcCHHHHhcC
Confidence            9999999999999999998853


No 298
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92  E-value=8.4e-26  Score=190.49  Aligned_cols=152  Identities=25%  Similarity=0.406  Sum_probs=105.8

Q ss_pred             ChhhhhhhhhcCC----CCCeEeccCCCCCeEeCC-----------------CCCeeecccccceeeccCCCcceeeeec
Q 047677            1 GAAKGLEYLHHGC----ARPVIHRDVKSSNILLDE-----------------FLKPRIADFGLARIVQSNGGKDTTHVIA   59 (200)
Q Consensus         1 qi~~~l~~Lh~~~----~~gi~h~dlk~~nil~~~-----------------~~~~~l~df~~~~~~~~~~~~~~~~~~~   59 (200)
                      ||+.||+|||...    ..+|+|+||||.|||+..                 .+.++|+|||++.......   ......
T Consensus       126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~v  202 (1021)
T PTZ00266        126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCV  202 (1021)
T ss_pred             HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc---cccccC
Confidence            6889999999421    146999999999999954                 2348999999987653221   112235


Q ss_pred             ccccccccccccC--CCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHH
Q 047677           60 GTTGYIAPEYGYT--SKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKEN  137 (200)
Q Consensus        60 ~~~~~~~pE~~~~--~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (200)
                      +++.|+|||++.+  ..++.++|||||||++|+|++|..||......    ...+.....         .+..+  ....
T Consensus       203 GTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~----~qli~~lk~---------~p~lp--i~~~  267 (1021)
T PTZ00266        203 GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF----SQLISELKR---------GPDLP--IKGK  267 (1021)
T ss_pred             CCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH----HHHHHHHhc---------CCCCC--cCCC
Confidence            7999999998754  34788999999999999999999999643211    111110000         01111  1112


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHHH--HHHHhhC
Q 047677          138 AVEILRIAVLCTTTQPALRPTMRSVV--QMLEEAE  170 (200)
Q Consensus       138 ~~~~~~li~~cl~~dp~~Rpt~~~il--~~L~~~~  170 (200)
                      ...+.+||..||..+|.+||++.+++  ..+....
T Consensus       268 S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        268 SKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             CHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence            34678899999999999999999998  4444443


No 299
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92  E-value=1.4e-25  Score=166.94  Aligned_cols=144  Identities=27%  Similarity=0.417  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCC-eeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLK-PRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~-~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++. ++++|||.+.........  .....++..|++||...+..++.++
T Consensus       109 ~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~  183 (257)
T cd08225         109 QISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL--AYTCVGTPYYLSPEICQNRPYNNKT  183 (257)
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc--ccccCCCccccCHHHHcCCCCCchh
Confidence            5789999999   899999999999999988754 699999988765432211  1123478889999998888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+||||++++++++|..||......     ......          .....+.........+.+++.+||..+|++|||+
T Consensus       184 Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  248 (257)
T cd08225         184 DIWSLGCVLYELCTLKHPFEGNNLH-----QLVLKI----------CQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSI  248 (257)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHH----------hcccCCCCCCCCCHHHHHHHHHHhccChhhCcCH
Confidence            9999999999999999998643211     111100          0111111111223468889999999999999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      .+++.
T Consensus       249 ~~ll~  253 (257)
T cd08225         249 TSILK  253 (257)
T ss_pred             HHHhh
Confidence            99975


No 300
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.92  E-value=3.7e-25  Score=167.18  Aligned_cols=144  Identities=25%  Similarity=0.373  Sum_probs=109.4

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccC--------------------------------
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSN--------------------------------   49 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~--------------------------------   49 (200)
                      |+-||+|||   -.|||+|||||+|||+..+|.+.|.||.++......                                
T Consensus       188 vl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~  264 (459)
T KOG0610|consen  188 VLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLS  264 (459)
T ss_pred             HHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhc
Confidence            466999999   899999999999999999999999999986432110                                


Q ss_pred             CCcc----------------------eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchh
Q 047677           50 GGKD----------------------TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKD  107 (200)
Q Consensus        50 ~~~~----------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~  107 (200)
                      ....                      .....+||-+|+|||++.+.+...++|+|+||+++|||+.|.-||.....    
T Consensus       265 ~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~----  340 (459)
T KOG0610|consen  265 SSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN----  340 (459)
T ss_pred             cccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc----
Confidence            0000                      01124689999999999999999999999999999999999999985433    


Q ss_pred             HHHHHHHhhcccchhhhhccCCC--CCchHHHHHHHHHHHHHhcCCCCCCCCC----HHHHHH
Q 047677          108 IVRWVCSHFNSKQSVLTLVDSSI--PETFKENAVEILRIAVLCTTTQPALRPT----MRSVVQ  164 (200)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rpt----~~~il~  164 (200)
                                 ..++..++.+..  |... .....+.+||.++|..||.+|.-    ++||-+
T Consensus       341 -----------~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  341 -----------KETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             -----------hhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence                       233333333322  2222 44557888999999999999998    777654


No 301
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.92  E-value=3.3e-25  Score=165.89  Aligned_cols=146  Identities=22%  Similarity=0.318  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-ceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+......... .......++..|++||...+..++.++
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (265)
T cd06652         114 QILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKA  190 (265)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcch
Confidence            5789999999   899999999999999999999999999988654321111 111123467889999998888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+|||||++|++++|..||......    ..... .         ......+..+......+.+++.+|+. +|++||++
T Consensus       191 Dv~slG~il~el~~g~~p~~~~~~~----~~~~~-~---------~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~  255 (265)
T cd06652         191 DIWSVGCTVVEMLTEKPPWAEFEAM----AAIFK-I---------ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSA  255 (265)
T ss_pred             hHHHHHHHHHHHhhCCCCCCccchH----HHHHH-H---------hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCH
Confidence            9999999999999999999643111    00000 0         00111122233344567788889984 99999999


Q ss_pred             HHHHH
Q 047677          160 RSVVQ  164 (200)
Q Consensus       160 ~~il~  164 (200)
                      +++++
T Consensus       256 ~~il~  260 (265)
T cd06652         256 DELLR  260 (265)
T ss_pred             HHHhc
Confidence            99875


No 302
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.92  E-value=6.3e-25  Score=169.39  Aligned_cols=167  Identities=25%  Similarity=0.331  Sum_probs=114.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc-ceeeeecccccccccccccCC-CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK-DTTHVIAGTTGYIAPEYGYTS-KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~pE~~~~~-~~~~~   78 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||.+......... .......++..|++||.+.+. .++.+
T Consensus       111 ~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  187 (330)
T cd07834         111 QILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKA  187 (330)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcc
Confidence            5789999999   899999999999999999999999999999876543210 111223467889999998877 78899


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc----------ccchhhhhc---cCCCC----CchHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN----------SKQSVLTLV---DSSIP----ETFKENAVEI  141 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~----~~~~~~~~~~  141 (200)
                      +|+||+|+++|++++|..||........  ...+.....          .........   ....+    .........+
T Consensus       188 sDi~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (330)
T cd07834         188 IDIWSVGCIFAELLTRKPLFPGRDYIDQ--LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEA  265 (330)
T ss_pred             hhHHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHH
Confidence            9999999999999999999975432111  111000000          000000000   00000    0011234567


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH--HHhhCCC
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQM--LEEAEPC  172 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~~--L~~~~~~  172 (200)
                      .+++.+||+.+|.+|||+.+++..  ++.....
T Consensus       266 ~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         266 IDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             HHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            889999999999999999999874  5554443


No 303
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.92  E-value=4.4e-25  Score=170.83  Aligned_cols=166  Identities=25%  Similarity=0.325  Sum_probs=112.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||.|||   ++|++|+||||+||+++.++.++|+|||++.........  .....++..|++||.+.. ..++.++
T Consensus       116 qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  190 (337)
T cd07858         116 QLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF--MTEYVVTRWYRAPELLLNCSEYTTAI  190 (337)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc--ccccccccCccChHHHhcCCCCCCcc
Confidence            5789999999   899999999999999999999999999998765432211  112346778999998765 4578999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc----------cchhh---hhcc----CCCCCchHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS----------KQSVL---TLVD----SSIPETFKENAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~----~~~~~~~~~~~~~~~  142 (200)
                      |+|||||++|++++|..||.......  ....+......          .....   ....    .............+.
T Consensus       191 DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (337)
T cd07858         191 DVWSVGCIFAELLGRKPLFPGKDYVH--QLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAI  268 (337)
T ss_pred             cHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHH
Confidence            99999999999999999996532111  11100000000          00000   0000    000001122345678


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHHH--HHhhCCCC
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQM--LEEAEPCN  173 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~~--L~~~~~~~  173 (200)
                      +++.+||+.+|++|||++++++.  +..+....
T Consensus       269 ~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~  301 (337)
T cd07858         269 DLLEKMLVFDPSKRITVEEALAHPYLASLHDPS  301 (337)
T ss_pred             HHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence            99999999999999999999877  66554443


No 304
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.92  E-value=5e-25  Score=170.33  Aligned_cols=161  Identities=25%  Similarity=0.336  Sum_probs=109.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce--eeeecccccccccccccC-CCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT--THVIAGTTGYIAPEYGYT-SKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~-~~~~~   77 (200)
                      |+++||+|||   ++|++|+||||+||+++.++.++|+|||++...........  .....++..|++||.+.+ ..++.
T Consensus       115 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  191 (334)
T cd07855         115 QLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTT  191 (334)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCccccc
Confidence            6889999999   89999999999999999999999999999876544322111  112357788999998765 45788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcc---------cchhh---hhccCCCCCc----hHHHHHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNS---------KQSVL---TLVDSSIPET----FKENAVEI  141 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~----~~~~~~~~  141 (200)
                      ++|+|||||++|++++|..||....... ............         .....   .......+..    .......+
T Consensus       192 ~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (334)
T cd07855         192 AIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEA  270 (334)
T ss_pred             ccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHH
Confidence            9999999999999999999996532211 010000000000         00000   0000000000    12234678


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+++.+||+.+|.+|||+.+++..
T Consensus       271 ~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         271 LDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             HHHHHHHccCChhhCcCHHHHHhC
Confidence            899999999999999999998763


No 305
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.92  E-value=1.3e-25  Score=173.52  Aligned_cols=150  Identities=23%  Similarity=0.319  Sum_probs=104.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++......... ......|+..|+|||++.     ...+
T Consensus       110 qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (332)
T cd05623         110 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKY  185 (332)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc-eecccccCccccCHHHHhccccCCCCC
Confidence            5789999999   899999999999999999999999999998654332211 112235899999999875     2357


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+|||||++|++++|..||......  .....+   ...      ......+.........+.+++.+|+..++.+
T Consensus       186 ~~~~DvwSlGvil~ell~g~~Pf~~~~~~--~~~~~i---~~~------~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r  254 (332)
T cd05623         186 GPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKI---MNH------KERFQFPAQVTDVSEDAKDLIRRLICSREHR  254 (332)
T ss_pred             CCcCCEEeeHHHHHHHhcCCCCCCCCCHH--HHHHHH---hCC------CccccCCCccccCCHHHHHHHHHHccChhhh
Confidence            88999999999999999999999743211  111100   000      0011122222233456777888888654444


Q ss_pred             --CCCHHHHHHH
Q 047677          156 --RPTMRSVVQM  165 (200)
Q Consensus       156 --Rpt~~~il~~  165 (200)
                        |+++.++++.
T Consensus       255 ~~r~~~~~~~~h  266 (332)
T cd05623         255 LGQNGIEDFKQH  266 (332)
T ss_pred             cCCCCHHHHhCC
Confidence              6888888765


No 306
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.92  E-value=2.7e-25  Score=167.67  Aligned_cols=147  Identities=27%  Similarity=0.386  Sum_probs=104.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |+++||.|||   ++|++|+||+|+||+++.++.++|+|||.+.........  .....++..|++||...     ...+
T Consensus       111 ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~  185 (280)
T cd06611         111 QMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK--RDTFIGTPYWMAPEVVACETFKDNPY  185 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc--cceeecchhhcCHHHHhhcccCCCCC
Confidence            5789999999   899999999999999999999999999987654332211  11234788899999864     3346


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||||+++|++++|..||....... ....    ....       ..+.. .........+.+++.+||+.+|.+
T Consensus       186 ~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~----~~~~-------~~~~~-~~~~~~~~~~~~li~~~l~~~p~~  252 (280)
T cd06611         186 DYKADIWSLGITLIELAQMEPPHHELNPMR-VLLK----ILKS-------EPPTL-DQPSKWSSSFNDFLKSCLVKDPDD  252 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHH----HhcC-------CCCCc-CCcccCCHHHHHHHHHHhccChhh
Confidence            778999999999999999999996432111 0000    0000       00000 011122346778999999999999


Q ss_pred             CCCHHHHHHH
Q 047677          156 RPTMRSVVQM  165 (200)
Q Consensus       156 Rpt~~~il~~  165 (200)
                      ||++.++++.
T Consensus       253 Rps~~~il~~  262 (280)
T cd06611         253 RPTAAELLKH  262 (280)
T ss_pred             CcCHHHHhcC
Confidence            9999998763


No 307
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.92  E-value=4.2e-25  Score=165.02  Aligned_cols=146  Identities=27%  Similarity=0.400  Sum_probs=108.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.......   ......++..|++||.+....++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~D  174 (262)
T cd05572         101 CVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVD  174 (262)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhh
Confidence            5789999999   8999999999999999999999999999987654321   112234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC--
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT--  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  158 (200)
                      +||+|+++|++++|..||.....+.......+.   ..      ......+..   ....+.+++.+||..+|.+||+  
T Consensus       175 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~------~~~~~~~~~---~~~~~~~~i~~~l~~~p~~R~~~~  242 (262)
T cd05572         175 YWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL---KG------NGKLEFPNY---IDKAAKDLIKQLLRRNPEERLGNL  242 (262)
T ss_pred             hhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh---cc------CCCCCCCcc---cCHHHHHHHHHHccCChhhCcCCc
Confidence            999999999999999999755432111111100   00      001111211   2457889999999999999999  


Q ss_pred             ---HHHHHH
Q 047677          159 ---MRSVVQ  164 (200)
Q Consensus       159 ---~~~il~  164 (200)
                         +.++++
T Consensus       243 ~~~~~~l~~  251 (262)
T cd05572         243 KGGIKDIKK  251 (262)
T ss_pred             ccCHHHHhc
Confidence               777765


No 308
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.92  E-value=8.2e-25  Score=165.70  Aligned_cols=153  Identities=29%  Similarity=0.419  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||++........    ....++..|++||...+..++.++|
T Consensus       113 ~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~D  185 (287)
T cd06621         113 SVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSD  185 (287)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhh
Confidence            5789999999   89999999999999999999999999999765432211    1223577899999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||.......................   .. ...+.........+.+++.+||..+|.+|||+.
T Consensus       186 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  261 (287)
T cd06621         186 VWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP---EL-KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPW  261 (287)
T ss_pred             HHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch---hh-ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHH
Confidence            99999999999999999975532111111111100110000   00 001111112345688999999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       262 eil~  265 (287)
T cd06621         262 DMLE  265 (287)
T ss_pred             HHHh
Confidence            9876


No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.92  E-value=3.9e-25  Score=168.00  Aligned_cols=147  Identities=24%  Similarity=0.362  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||++........  ......++..|++||......++.++|
T Consensus       123 ~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~D  197 (293)
T cd06647         123 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVD  197 (293)
T ss_pred             HHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhh
Confidence            5789999999   89999999999999999999999999998765443221  111234678899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||.......... .           ......... .........+.+++.+||..+|++||++.
T Consensus       198 v~slG~ll~~ll~g~~pf~~~~~~~~~~-~-----------~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~  264 (293)
T cd06647         198 IWSLGIMAIEMVEGEPPYLNENPLRALY-L-----------IATNGTPEL-QNPEKLSAIFRDFLNRCLEMDVEKRGSAK  264 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChhhhee-e-----------hhcCCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHH
Confidence            9999999999999999996542211000 0           000000011 11122334677899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       265 ~il~h  269 (293)
T cd06647         265 ELLQH  269 (293)
T ss_pred             HHhcC
Confidence            99865


No 310
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92  E-value=3.7e-25  Score=168.29  Aligned_cols=148  Identities=32%  Similarity=0.490  Sum_probs=105.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC----CC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK----VD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~----~~   76 (200)
                      |+++||+|||.  ..|++|+||+|.||+++.++.++|+|||.+.........   ....++..|++||.+.+..    ++
T Consensus       122 ~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  196 (296)
T cd06618         122 AIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYD  196 (296)
T ss_pred             HHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccc
Confidence            57899999993  259999999999999999999999999998655332211   1123577899999876543    67


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      .++|+||||+++|++++|..||........ .....   ....       ....+. .......+.+++.+||+.||.+|
T Consensus       197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~---~~~~-------~~~~~~-~~~~~~~l~~li~~~l~~~p~~R  264 (296)
T cd06618         197 IRADVWSLGISLVELATGQFPYKNCKTEFE-VLTKI---LQEE-------PPSLPP-NEGFSPDFCSFVDLCLTKDHRKR  264 (296)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCcchhHHH-HHHHH---hcCC-------CCCCCC-CCCCCHHHHHHHHHHccCChhhC
Confidence            899999999999999999999964321111 11100   0000       011111 11123467889999999999999


Q ss_pred             CCHHHHHHH
Q 047677          157 PTMRSVVQM  165 (200)
Q Consensus       157 pt~~~il~~  165 (200)
                      |++.+++..
T Consensus       265 p~~~~il~~  273 (296)
T cd06618         265 PKYRELLQH  273 (296)
T ss_pred             CCHHHHhcC
Confidence            999999754


No 311
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.92  E-value=2.3e-25  Score=172.78  Aligned_cols=164  Identities=21%  Similarity=0.294  Sum_probs=110.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++||||+|+||+++.++.++|+|||++.......     ....++..|+|||.+.+ ..++.++
T Consensus       125 qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  196 (342)
T cd07879         125 QMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILNWMHYNQTV  196 (342)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCC-----CCceeeecccChhhhcCccccCchH
Confidence            5789999999   8999999999999999999999999999986543211     11235778999998766 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhh---------hc--cCCCCCc-----hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLT---------LV--DSSIPET-----FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~-----~~~~~~~~~~  143 (200)
                      |+|||||++|++++|+.||...... ...................         ..  .+..+..     .......+.+
T Consensus       197 Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (342)
T cd07879         197 DIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVD  275 (342)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHH
Confidence            9999999999999999999753211 1111111000000000000         00  0000000     1122346788


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH--HHhhCCCC
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM--LEEAEPCN  173 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~--L~~~~~~~  173 (200)
                      ++.+||+.||.+||++.+++..  ++...+..
T Consensus       276 li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~  307 (342)
T cd07879         276 LLEKMLELDVDKRLTATEALEHPYFDSFRDAD  307 (342)
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence            9999999999999999999854  66655443


No 312
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92  E-value=2.9e-25  Score=167.86  Aligned_cols=149  Identities=28%  Similarity=0.463  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||+  .+|++|+||+|.||+++.++.++|+|||++........    ....++..|++||.+.+..++.++|
T Consensus       111 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~D  184 (284)
T cd06620         111 AVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA----DTFVGTSTYMSPERIQGGKYTVKSD  184 (284)
T ss_pred             HHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc----CccccCcccCCHHHHccCCCCccch
Confidence            47889999994  36899999999999999999999999998765432211    1234788999999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCch------hHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENK------DIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp  153 (200)
                      +|||||++|++++|..||........      .......          .......+.. .......+.+++.+||..||
T Consensus       185 i~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  254 (284)
T cd06620         185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ----------QIVQEPPPRLPSSDFPEDLRDFVDACLLKDP  254 (284)
T ss_pred             HHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHH----------HHhhccCCCCCchhcCHHHHHHHHHHhcCCc
Confidence            99999999999999999975432210      0111111          0111111111 11233568889999999999


Q ss_pred             CCCCCHHHHHHH
Q 047677          154 ALRPTMRSVVQM  165 (200)
Q Consensus       154 ~~Rpt~~~il~~  165 (200)
                      ++|||+.++++.
T Consensus       255 ~~Rpt~~e~~~~  266 (284)
T cd06620         255 TERPTPQQLCAM  266 (284)
T ss_pred             ccCcCHHHHhcC
Confidence            999999999876


No 313
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.92  E-value=3.8e-25  Score=169.21  Aligned_cols=157  Identities=24%  Similarity=0.419  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||+  ..|++|+||+|.||+++.++.++|+|||++.......    .....++..|++||...+..++.++|
T Consensus       107 ~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~D  180 (308)
T cd06615         107 AVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSD  180 (308)
T ss_pred             HHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccch
Confidence            57899999994  2589999999999999999999999999886543221    11234688999999988777889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc-----------------------hhhhhccCCCCCch-HH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ-----------------------SVLTLVDSSIPETF-KE  136 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~-~~  136 (200)
                      +||||+++|++++|..||......  ..............                       ..........+..+ ..
T Consensus       181 iwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (308)
T cd06615         181 IWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGA  258 (308)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcc
Confidence            999999999999999998643211  11111100000000                       00000000000000 01


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          137 NAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       137 ~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ....+.+++.+||..+|++|||+.+++..
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            23468899999999999999999998876


No 314
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92  E-value=2.9e-25  Score=168.69  Aligned_cols=146  Identities=25%  Similarity=0.374  Sum_probs=107.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+.......  .......++..|++||...+..++.++|
T Consensus       124 ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~D  198 (292)
T cd06657         124 AVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVD  198 (292)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccccCccccCHHHhcCCCCCchhh
Confidence            5789999999   7899999999999999999999999999876554321  1112234678899999988778889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|+++|++++|..||......  .......          ........ ........+.+++.+||..+|.+||++.
T Consensus       199 v~slGvil~el~tg~~p~~~~~~~--~~~~~~~----------~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~R~~~~  265 (292)
T cd06657         199 IWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIR----------DNLPPKLK-NLHKVSPSLKGFLDRLLVRDPAQRATAA  265 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH----------hhCCcccC-CcccCCHHHHHHHHHHHhCCcccCcCHH
Confidence            999999999999999998643211  1111110          00001110 1112234577889999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       266 ~ll~  269 (292)
T cd06657         266 ELLK  269 (292)
T ss_pred             HHhc
Confidence            9987


No 315
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.92  E-value=3.9e-25  Score=167.23  Aligned_cols=159  Identities=23%  Similarity=0.317  Sum_probs=108.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+......... ......++..|+|||+.... .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~  183 (288)
T cd07833         108 QLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPV  183 (288)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchh
Confidence            5889999999   899999999999999999999999999998765443221 11123467889999998887 788999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhc------cC-CCCCc----------hHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLV------DS-SIPET----------FKENAVEIL  142 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~----------~~~~~~~~~  142 (200)
                      |+||||+++|++++|..||......+ ....................      .. ..++.          .......+.
T Consensus       184 Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (288)
T cd07833         184 DVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPAL  262 (288)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHH
Confidence            99999999999999999986432211 11110000000000000000      00 00000          011245788


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+||..+|++|||+++++.
T Consensus       263 ~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         263 DFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHhccCchhcccHHHHhc
Confidence            9999999999999999999875


No 316
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.92  E-value=2.2e-25  Score=170.31  Aligned_cols=160  Identities=24%  Similarity=0.301  Sum_probs=106.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce---------eeeeccccccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT---------THVIAGTTGYIAPEYGY   71 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~---------~~~~~~~~~~~~pE~~~   71 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++...........         .....++..|+|||...
T Consensus       123 ~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (311)
T cd07866         123 QLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL  199 (311)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhh
Confidence            5889999999   89999999999999999999999999999865533211111         11224577899999876


Q ss_pred             CC-CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc-------hhhh----hccCCCCCc----hH
Q 047677           72 TS-KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ-------SVLT----LVDSSIPET----FK  135 (200)
Q Consensus        72 ~~-~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~----~~  135 (200)
                      +. .++.++|+||||+++|++++|..||........ .............       ....    ......+..    ..
T Consensus       200 ~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (311)
T cd07866         200 GERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFG  278 (311)
T ss_pred             CCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcc
Confidence            54 478899999999999999999999864332211 1111100000000       0000    000111111    11


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          136 ENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       136 ~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      .....+.+++.+||+.||.+|||+.+++.
T Consensus       279 ~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         279 KLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             cCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            22256788999999999999999998874


No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92  E-value=3.7e-25  Score=167.41  Aligned_cols=146  Identities=28%  Similarity=0.452  Sum_probs=106.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||...+..++.++|
T Consensus       124 ~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~D  198 (286)
T cd06614         124 EVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVD  198 (286)
T ss_pred             HHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccc
Confidence            5789999999   89999999999999999999999999998765433211  111233677899999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||......  .......   .  ..     .... .........+.+++.+||+.+|.+|||+.
T Consensus       199 v~slGvil~~l~~g~~p~~~~~~~--~~~~~~~---~--~~-----~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  265 (286)
T cd06614         199 IWSLGIMCIEMAEGEPPYLREPPL--RALFLIT---T--KG-----IPPL-KNPEKWSPEFKDFLNKCLVKDPEKRPSAE  265 (286)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---h--cC-----CCCC-cchhhCCHHHHHHHHHHhccChhhCcCHH
Confidence            999999999999999998643211  0000000   0  00     0000 01111234678899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       266 ~il~  269 (286)
T cd06614         266 ELLQ  269 (286)
T ss_pred             HHhh
Confidence            9985


No 318
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.92  E-value=2.4e-25  Score=171.95  Aligned_cols=160  Identities=24%  Similarity=0.325  Sum_probs=107.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc--eeeeecccccccccccccC-CCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD--TTHVIAGTTGYIAPEYGYT-SKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~-~~~~~   77 (200)
                      |++.||+|||   ++|++|+||||.||+++.++.++|+|||.+..........  ......++..|++||...+ ..++.
T Consensus       113 qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  189 (332)
T cd07857         113 QILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTK  189 (332)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCc
Confidence            6889999999   8999999999999999999999999999987654322111  1112357889999998765 45788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc----------cc--chhhhhccC----CCCCchHHHHHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN----------SK--QSVLTLVDS----SIPETFKENAVEI  141 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~----~~~~~~~~~~~~~  141 (200)
                      ++|+||+|+++|++++|..||....... .+...+.....          ..  .........    .+..........+
T Consensus       190 ~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (332)
T cd07857         190 AIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLA  268 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHH
Confidence            9999999999999999999986532110 00000000000          00  000000000    0000011123467


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHH
Q 047677          142 LRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       142 ~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+++.+||+.||.+|||+.+++.
T Consensus       269 ~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         269 LDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHHHHccCCcccCCCHHHHhc
Confidence            88999999999999999999874


No 319
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.92  E-value=1.7e-25  Score=166.90  Aligned_cols=150  Identities=29%  Similarity=0.444  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc------ceeeeecccccccccccccCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK------DTTHVIAGTTGYIAPEYGYTSK   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~~~~~~pE~~~~~~   74 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||++.........      .......++..|++||......
T Consensus       101 qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  177 (265)
T cd05579         101 EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG  177 (265)
T ss_pred             HHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCC
Confidence            6889999999   899999999999999999999999999988654432111      1122234677899999988888


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      .+.++|+||||+++|++++|..||......  ......   ...        ....+.. ......+.+++.+||+.+|.
T Consensus       178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~---~~~--------~~~~~~~-~~~~~~~~~~i~~~l~~~p~  243 (265)
T cd05579         178 HSKTVDWWSLGCILYEFLVGIPPFHGETPE--EIFQNI---LNG--------KIEWPED-VEVSDEAIDLISKLLVPDPE  243 (265)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH---hcC--------CcCCCcc-ccCCHHHHHHHHHHhcCCHh
Confidence            889999999999999999999999644311  111110   000        0011111 11245778899999999999


Q ss_pred             CCCCHHHHHHHHH
Q 047677          155 LRPTMRSVVQMLE  167 (200)
Q Consensus       155 ~Rpt~~~il~~L~  167 (200)
                      +|||+..+.+.|+
T Consensus       244 ~Rpt~~~~~~~l~  256 (265)
T cd05579         244 KRLGAKSIEEIKN  256 (265)
T ss_pred             hcCCCccHHHHhc
Confidence            9999966666554


No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.92  E-value=4.6e-25  Score=163.90  Aligned_cols=148  Identities=28%  Similarity=0.412  Sum_probs=110.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+................++..|++||.......+.++|
T Consensus       109 ~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  185 (260)
T cd06606         109 QILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAAD  185 (260)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhh
Confidence            5789999999   7999999999999999999999999999987765543211122234788999999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||++++++++|..||........    ... ...        .....+..+......+.+++.+|+..||.+||++.
T Consensus       186 v~slG~il~~l~~g~~p~~~~~~~~~----~~~-~~~--------~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~  252 (260)
T cd06606         186 IWSLGCTVIEMATGKPPWSELGNPMA----ALY-KIG--------SSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTAD  252 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCchHH----HHH-hcc--------ccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHH
Confidence            99999999999999999975441111    000 000        00111111222245788899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       253 ~ll~  256 (260)
T cd06606         253 ELLQ  256 (260)
T ss_pred             HHhh
Confidence            9875


No 321
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.92  E-value=2.4e-25  Score=167.75  Aligned_cols=146  Identities=27%  Similarity=0.341  Sum_probs=105.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||+|.||+++.++.++|+|||.+.......   ......++..|++||...+..++.++|
T Consensus       103 ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~D  176 (277)
T cd05577         103 QIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVD  176 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhh
Confidence            5789999999   8999999999999999999999999999886543211   111234677899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +||+|+++|++++|..||......... ....           .................+.+++.+||+.||.+||   
T Consensus       177 i~slG~il~~l~~g~~p~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  244 (277)
T cd05577         177 WFALGCTLYEMIAGRSPFRQRKEKVEK-EELK-----------RRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCR  244 (277)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCcccccH-HHHH-----------hccccccccCCccCCHHHHHHHHHHccCChhHccCCC
Confidence            999999999999999999654321100 0000           0000000011122244678899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        ++.+++.
T Consensus       245 ~~~~~~ll~  253 (277)
T cd05577         245 GGSADEVRE  253 (277)
T ss_pred             cccHHHHHh
Confidence              6666654


No 322
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.92  E-value=2e-25  Score=166.63  Aligned_cols=145  Identities=28%  Similarity=0.402  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||++......      ....++..|++||...+..++.++|
T Consensus       105 qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~D  175 (260)
T cd05611         105 EVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSD  175 (260)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc------ccCCCCcCccChhhhcCCCCcchhh
Confidence            6889999999   899999999999999999999999999988654321      1223678899999988877889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|+++|++++|..||......  .....   .....        ...+.. .......+.+++.+||+.+|++||++
T Consensus       176 v~slG~il~~l~~g~~p~~~~~~~--~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         176 WWSLGCVIFEFLFGYPPFHAETPD--AVFDN---ILSRR--------INWPEEVKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             hHHHHHHHHHHHHCCCCCCCCCHH--HHHHH---HHhcc--------cCCCCcccccCCHHHHHHHHHHccCCHHHccCC
Confidence            999999999999999999643221  11100   00000        001111 11233568889999999999999987


Q ss_pred             HHHHHHHH
Q 047677          160 RSVVQMLE  167 (200)
Q Consensus       160 ~~il~~L~  167 (200)
                      .++.+.|.
T Consensus       243 ~~~~~~l~  250 (260)
T cd05611         243 NGYQEIKS  250 (260)
T ss_pred             CcHHHHHc
Confidence            66655443


No 323
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92  E-value=2.9e-25  Score=157.00  Aligned_cols=142  Identities=29%  Similarity=0.406  Sum_probs=111.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|+.|+|   .++++||||||+|++++..+.+|++|||-+....++.    .....||..|++||.+.+...+..+|
T Consensus       132 q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k----R~tlcgt~dyl~pEmv~~~~hd~~Vd  204 (281)
T KOG0580|consen  132 QLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK----RKTLCGTLDYLPPEMVEGRGHDKFVD  204 (281)
T ss_pred             HHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCC----ceeeecccccCCHhhcCCCCccchhh
Confidence            6889999999   8999999999999999999999999999987765332    22244899999999999999999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|++|++.|+++.|.+||......  ..           .......+-.+|..   ......++|.+|+..+|.+|.+..
T Consensus       205 ~w~lgvl~yeflvg~ppFes~~~~--et-----------YkrI~k~~~~~p~~---is~~a~dlI~~ll~~~p~~r~~l~  268 (281)
T KOG0580|consen  205 LWSLGVLCYEFLVGLPPFESQSHS--ET-----------YKRIRKVDLKFPST---ISGGAADLISRLLVKNPIERLALT  268 (281)
T ss_pred             HHHHHHHHHHHHhcCCchhhhhhH--HH-----------HHHHHHccccCCcc---cChhHHHHHHHHhccCccccccHH
Confidence            999999999999999999754311  11           11111222233332   233566788899999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++++.
T Consensus       269 ~v~~h  273 (281)
T KOG0580|consen  269 EVMDH  273 (281)
T ss_pred             HHhhh
Confidence            98753


No 324
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92  E-value=2.2e-25  Score=166.25  Aligned_cols=144  Identities=30%  Similarity=0.407  Sum_probs=107.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||+|.||+++.++.++|+|||.+.......   ......++..|++||...+..++.++|
T Consensus       108 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~D  181 (258)
T cd05578         108 EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVD  181 (258)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCccc
Confidence            5889999999   8999999999999999999999999999987654322   112234678899999988888899999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH-
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM-  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-  159 (200)
                      +||+|+++|++++|..||.........  .... ....       .....+   ......+.+++.+||..||.+||++ 
T Consensus       182 i~slG~~l~~l~~g~~p~~~~~~~~~~--~~~~-~~~~-------~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~  248 (258)
T cd05578         182 WWSLGVTAYECLRGKRPYRGHSRTIRD--QIRA-KQET-------ADVLYP---ATWSTEAIDAINKLLERDPQKRLGDN  248 (258)
T ss_pred             chhhHHHHHHHHhCCCCCCCCCccHHH--HHHH-Hhcc-------ccccCc---ccCcHHHHHHHHHHccCChhHcCCcc
Confidence            999999999999999999765432111  1000 0000       111112   2233578889999999999999999 


Q ss_pred             -HHHH
Q 047677          160 -RSVV  163 (200)
Q Consensus       160 -~~il  163 (200)
                       ++++
T Consensus       249 ~~~l~  253 (258)
T cd05578         249 LKDLK  253 (258)
T ss_pred             HHHHh
Confidence             5544


No 325
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.92  E-value=3.8e-25  Score=164.21  Aligned_cols=144  Identities=29%  Similarity=0.442  Sum_probs=108.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||.|||   ++|++|+||+|.||+++.++.++|+|||.+.........  .....++..|++||...+...+.++|
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~D  181 (254)
T cd06627         107 QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASD  181 (254)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchh
Confidence            5789999999   899999999999999999999999999998766543221  11234678899999987777889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +|++|++++++++|..||......    ..... ..          ....+.........+.+++.+||..+|++|||+.
T Consensus       182 v~~lG~~l~~l~~g~~p~~~~~~~----~~~~~-~~----------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  246 (254)
T cd06627         182 IWSLGCTVIELLTGNPPYYDLNPM----AALFR-IV----------QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAK  246 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccHH----HHHHH-Hh----------ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHH
Confidence            999999999999999998643311    10000 00          0111111122244677899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      +++.
T Consensus       247 ~~l~  250 (254)
T cd06627         247 QLLK  250 (254)
T ss_pred             HHhc
Confidence            9874


No 326
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.92  E-value=4e-25  Score=167.01  Aligned_cols=158  Identities=25%  Similarity=0.356  Sum_probs=107.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||.+........ .......++..|++||.+.+.. ++.++
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07832         107 MLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGV  182 (286)
T ss_pred             HHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchh
Confidence            5789999999   89999999999999999999999999999876544321 1111234788899999876544 57899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc-----------hhhhhccCCC-----CCchHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ-----------SVLTLVDSSI-----PETFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-----~~~~~~~~~~~~~  143 (200)
                      |+||+||+++++++|..+|..... ...+ ...........           ..........     ..........+.+
T Consensus       183 Di~slG~~l~~l~tg~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (286)
T cd07832         183 DLWAVGCIFAELLNGSPLFPGEND-IEQL-AIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALD  260 (286)
T ss_pred             HHHHHHHHHHHHHcCCcCcCCCCH-HHHH-HHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHH
Confidence            999999999999999777754321 1111 11111000000           0000000000     0001122367889


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||..+|.+|||+++++.
T Consensus       261 li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         261 LLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHHhccChhhCCCHHHHhh
Confidence            999999999999999999875


No 327
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.92  E-value=3.8e-25  Score=176.66  Aligned_cols=147  Identities=28%  Similarity=0.376  Sum_probs=115.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceee-eecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTH-VIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~-~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      ||++|+.||.   ++++|||||-..|+++.....+||+|||+.+.++.+...-.-. ...-.+.|+|||.+....++.++
T Consensus       220 QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaS  296 (1039)
T KOG0199|consen  220 QIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHAS  296 (1039)
T ss_pred             HHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccc
Confidence            7999999999   8999999999999999999999999999998877654322211 11124579999999999999999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|+||+++|||++ |.-||.....-               ..+..+-.+.....+....+++++++..||..+|++|||
T Consensus       297 DvWmyGVTiWEMFtyGEePW~G~~g~---------------qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRpt  361 (1039)
T KOG0199|consen  297 DVWMYGVTIWEMFTYGEEPWVGCRGI---------------QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPT  361 (1039)
T ss_pred             hhhhhhhhHHhhhccCCCCCCCCCHH---------------HHHHhccccccCCCCCCChHHHHHHHHHhccCCcccccc
Confidence            99999999999998 78899754321               111122223333445566678999999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      +..|.+.
T Consensus       362 Fsair~~  368 (1039)
T KOG0199|consen  362 FSAIRED  368 (1039)
T ss_pred             HHHHHHh
Confidence            9999743


No 328
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.92  E-value=7.6e-26  Score=176.58  Aligned_cols=148  Identities=24%  Similarity=0.345  Sum_probs=101.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc----------------------------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK----------------------------   52 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~----------------------------   52 (200)
                      |++.||.|||   ++|++||||||+||+++.++.++|+|||++.........                            
T Consensus       109 qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (360)
T cd05627         109 ETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETW  185 (360)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccc
Confidence            5789999999   899999999999999999999999999998644221100                            


Q ss_pred             -----ceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhcc
Q 047677           53 -----DTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVD  127 (200)
Q Consensus        53 -----~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (200)
                           .......|+..|+|||++.+..++.++|+|||||++|+|++|..||.......  ....+.   .....      
T Consensus       186 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~--~~~~i~---~~~~~------  254 (360)
T cd05627         186 KKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE--TYRKVM---NWKET------  254 (360)
T ss_pred             cccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHH--HHHHHH---cCCCc------
Confidence                 00112358899999999998889999999999999999999999997543211  110000   00000      


Q ss_pred             CCCCCchHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 047677          128 SSIPETFKENAVEILRIAVLCTTTQPALRPT---MRSVVQ  164 (200)
Q Consensus       128 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt---~~~il~  164 (200)
                      ...+.. ......+.+++.+|+ .||.+|++   +.++++
T Consensus       255 ~~~p~~-~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         255 LVFPPE-VPISEKAKDLILRFC-TDSENRIGSNGVEEIKS  292 (360)
T ss_pred             eecCCC-CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence            011111 112335666777776 49999996   455543


No 329
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.91  E-value=6.8e-25  Score=163.86  Aligned_cols=149  Identities=32%  Similarity=0.477  Sum_probs=107.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCccee--eeecccccccccccccCCC---C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTT--HVIAGTTGYIAPEYGYTSK---V   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~--~~~~~~~~~~~pE~~~~~~---~   75 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||.+............  ....++..|++||.+....   .
T Consensus       107 ~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  183 (264)
T cd06626         107 QLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGH  183 (264)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCC
Confidence            5789999999   899999999999999999999999999998766543221111  1234678899999987765   7


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      ..++|+||||++++++++|..||........ ......          .......+.. ......+.+++.+||+.+|.+
T Consensus       184 ~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~----------~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  251 (264)
T cd06626         184 GRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVG----------AGHKPPIPDS-LQLSPEGKDFLDRCLESDPKK  251 (264)
T ss_pred             CcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHh----------cCCCCCCCcc-cccCHHHHHHHHHHccCCccc
Confidence            8899999999999999999999964432111 110000          0001111111 112446678999999999999


Q ss_pred             CCCHHHHHH
Q 047677          156 RPTMRSVVQ  164 (200)
Q Consensus       156 Rpt~~~il~  164 (200)
                      |||+.+++.
T Consensus       252 R~~~~~i~~  260 (264)
T cd06626         252 RPTASELLQ  260 (264)
T ss_pred             CCCHHHHhc
Confidence            999999864


No 330
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.91  E-value=7.8e-25  Score=163.96  Aligned_cols=150  Identities=30%  Similarity=0.479  Sum_probs=108.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-CeeecccccceeeccCCCcc--eeeeecccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-KPRIADFGLARIVQSNGGKD--TTHVIAGTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~   77 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++ .++|+|||.+..........  ......++..|++||.+.+..++.
T Consensus       111 ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  187 (268)
T cd06630         111 QLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGR  187 (268)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCc
Confidence            6889999999   89999999999999998765 58999999987665431111  111234678899999988888889


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+||+|++++++++|..||...........  .....         .....+.........+.+++.+||..+|.+||
T Consensus       188 ~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  256 (268)
T cd06630         188 SCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL--IFKIA---------SATTAPSIPEHLSPGLRDVTLRCLELQPEDRP  256 (268)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCCcchHHH--HHHHh---------ccCCCCCCchhhCHHHHHHHHHHcCCCcccCc
Confidence            99999999999999999999964332211110  00000         00111122223445788899999999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      |+.+++.
T Consensus       257 ~~~~ll~  263 (268)
T cd06630         257 PSRELLK  263 (268)
T ss_pred             CHHHHhc
Confidence            9999874


No 331
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.91  E-value=6.4e-25  Score=165.44  Aligned_cols=145  Identities=28%  Similarity=0.483  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|+.|||   ++|++|+||+|.||+++.++.++++|||++........  ......++..|++||...+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~D  183 (277)
T cd06641         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--hhccccCCccccChhhhccCCCCchhh
Confidence            5788999999   89999999999999999999999999998865533211  111234677899999988888889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+||++|++++|..||......  .....+             .....+.........+.+++.+||..+|.+||++.
T Consensus       184 v~slG~~l~~l~~g~~p~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (277)
T cd06641         184 IWSLGITAIELAKGEPPHSELHPM--KVLFLI-------------PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK  248 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCccchH--HHHHHH-------------hcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence            999999999999999998643211  000000             00111111122234677899999999999999999


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      +++..
T Consensus       249 ~~l~~  253 (277)
T cd06641         249 ELLKH  253 (277)
T ss_pred             HHHhC
Confidence            99984


No 332
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.91  E-value=5.8e-25  Score=168.16  Aligned_cols=142  Identities=31%  Similarity=0.448  Sum_probs=104.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |++.||.|||   ++|++|+||+|.||+++.++.++|+|||++.......      ...++..|+|||.+.   ...++.
T Consensus       123 ~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (308)
T cd06634         123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDG  193 (308)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc------cccCCccccCHHHHhhcccCCCCc
Confidence            5789999999   8899999999999999999999999999886543221      223678899999864   345778


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ++|+|||||++|++++|..||.......  ...             .......+.. .......+.+++.+||..+|.+|
T Consensus       194 ~~Di~slG~il~el~~g~~p~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~R  258 (308)
T cd06634         194 KVDVWSLGITCIELAERKPPLFNMNAMS--ALY-------------HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR  258 (308)
T ss_pred             ccchHHHHHHHHHHHcCCCCCccccHHH--HHH-------------HHhhcCCCCcCcccccHHHHHHHHHHhhCCcccC
Confidence            9999999999999999999986432111  000             0000111111 11233457789999999999999


Q ss_pred             CCHHHHHHHH
Q 047677          157 PTMRSVVQML  166 (200)
Q Consensus       157 pt~~~il~~L  166 (200)
                      |++.+++..-
T Consensus       259 p~~~~ll~~~  268 (308)
T cd06634         259 PTSEVLLKHR  268 (308)
T ss_pred             CCHHHHhhCc
Confidence            9999998763


No 333
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.91  E-value=1.2e-24  Score=166.96  Aligned_cols=149  Identities=30%  Similarity=0.412  Sum_probs=107.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |++.||.|||   ++|++|+||+|.||+++.++.++|+|||++......      ....++..|++||.+.   ...++.
T Consensus       133 ~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~  203 (317)
T cd06635         133 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDG  203 (317)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCc
Confidence            5789999999   899999999999999999999999999987644321      1234678899999874   345788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++|+|||||++|++++|..||....... .......             ....+.........+.+++.+||+.+|.+||
T Consensus       204 ~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  269 (317)
T cd06635         204 KVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ-------------NESPTLQSNEWSDYFRNFVDSCLQKIPQDRP  269 (317)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHh-------------ccCCCCCCccccHHHHHHHHHHccCCcccCc
Confidence            9999999999999999999986432110 0000000             0000111112234678899999999999999


Q ss_pred             CHHHHHHHHHhhCCC
Q 047677          158 TMRSVVQMLEEAEPC  172 (200)
Q Consensus       158 t~~~il~~L~~~~~~  172 (200)
                      ++.++++.+-.....
T Consensus       270 t~~~il~~~~~~~~~  284 (317)
T cd06635         270 TSEELLKHMFVLRER  284 (317)
T ss_pred             CHHHHHhChhhhccC
Confidence            999999865544433


No 334
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91  E-value=4.2e-25  Score=170.56  Aligned_cols=150  Identities=23%  Similarity=0.347  Sum_probs=102.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-----CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-----SKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-----~~~   75 (200)
                      |+++||+|||   ++|++||||||.||+++.++.++|+|||++......... ......|++.|+|||++..     ..+
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05597         110 EMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRY  185 (331)
T ss_pred             HHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCC
Confidence            6889999999   899999999999999999999999999998665432221 1112347899999998763     346


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCC--
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQP--  153 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp--  153 (200)
                      +.++|+||+||++|++++|..||......  .....+   .....      ....+.........+.+++.+|+..++  
T Consensus       186 ~~~~DiwslG~~l~el~~g~~Pf~~~~~~--~~~~~i---~~~~~------~~~~~~~~~~~~~~~~~li~~ll~~~~~r  254 (331)
T cd05597         186 GPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKI---MNHKE------HFQFPPDVTDVSEEAKDLIRRLICSPETR  254 (331)
T ss_pred             CCcceeehhhhHHHHHhhCCCCCCCCCHH--HHHHHH---HcCCC------cccCCCccCCCCHHHHHHHHHHccCcccc
Confidence            78899999999999999999999643211  110000   00000      011122112233466777778775533  


Q ss_pred             CCCCCHHHHHHH
Q 047677          154 ALRPTMRSVVQM  165 (200)
Q Consensus       154 ~~Rpt~~~il~~  165 (200)
                      ..|+++.++++.
T Consensus       255 ~~r~~~~~~l~h  266 (331)
T cd05597         255 LGRNGLQDFKDH  266 (331)
T ss_pred             cCCCCHHHHhcC
Confidence            347888888765


No 335
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.91  E-value=3.8e-25  Score=167.77  Aligned_cols=140  Identities=24%  Similarity=0.355  Sum_probs=105.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||++......     .....++..|++||.+.+...+.++|
T Consensus       109 qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~D  180 (290)
T cd05580         109 QVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVD  180 (290)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCcccc
Confidence            5889999999   899999999999999999999999999998765432     11234678899999988878888999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC---
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP---  157 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---  157 (200)
                      +||||+++|++++|..||.....  ......+.   .        ....++..   ....+.+++.+||..||.+|+   
T Consensus       181 i~slG~il~~l~~g~~p~~~~~~--~~~~~~~~---~--------~~~~~~~~---~~~~l~~li~~~l~~~p~~R~~~~  244 (290)
T cd05580         181 WWALGILIYEMLAGYPPFFDDNP--IQIYEKIL---E--------GKVRFPSF---FSPDAKDLIRNLLQVDLTKRLGNL  244 (290)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh---c--------CCccCCcc---CCHHHHHHHHHHccCCHHHccCcc
Confidence            99999999999999999965431  11111000   0        01112222   234677899999999999999   


Q ss_pred             --CHHHHHH
Q 047677          158 --TMRSVVQ  164 (200)
Q Consensus       158 --t~~~il~  164 (200)
                        +++++++
T Consensus       245 ~~~~~~l~~  253 (290)
T cd05580         245 KNGVNDIKN  253 (290)
T ss_pred             cCCHHHHHc
Confidence              7777653


No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.91  E-value=9.4e-25  Score=168.39  Aligned_cols=160  Identities=26%  Similarity=0.371  Sum_probs=104.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-----eeeecccccccccccccCC--
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-----THVIAGTTGYIAPEYGYTS--   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-----~~~~~~~~~~~~pE~~~~~--   73 (200)
                      |+++||+|||   ++|++||||||+||++..++.++++||+.+...........     .....++..|++||++.+.  
T Consensus       109 qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (328)
T cd08226         109 GALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLY  185 (328)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCC
Confidence            6789999999   89999999999999999999999999976533322111100     1111245569999998763  


Q ss_pred             CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHH-----------------hhcccchhh-------------
Q 047677           74 KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCS-----------------HFNSKQSVL-------------  123 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-------------  123 (200)
                      .++.++|+||+||++|++++|..||......... ......                 .........             
T Consensus       186 ~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (328)
T cd08226         186 GYNVKSDIYSVGITACELATGRVPFQDMLRTQML-LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMT  264 (328)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH-HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccc
Confidence            4678999999999999999999999754321110 000000                 000000000             


Q ss_pred             -hhc-cCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          124 -TLV-DSSIPETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       124 -~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                       ... ..............+.+++.+||..||++|||+.++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         265 QTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence             000 00001112334567889999999999999999999964


No 337
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.91  E-value=3.9e-26  Score=183.89  Aligned_cols=156  Identities=22%  Similarity=0.396  Sum_probs=120.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeee--cccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVI--AGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~--~~~~~~~~pE~~~~~~~~~~   78 (200)
                      +|+.|++||-   .+|+|||||-+.|||++.+..+||.|||+++.+...... .....  ....+|.|||.+...+++.+
T Consensus       739 GIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~-~ytt~GGKIPiRWTAPEAIa~RKFTsA  814 (996)
T KOG0196|consen  739 GIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-AYTTLGGKIPIRWTAPEAIAYRKFTSA  814 (996)
T ss_pred             HHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCc-cccccCCccceeecChhHhhhcccCch
Confidence            4789999999   899999999999999999999999999999877544311 11111  12468999999999999999


Q ss_pred             cchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        79 ~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      +|+||+|+++||.++ |..||=...+++  .             ...+...-..+.+.+....+.+||+.||+.|..+||
T Consensus       815 SDVWSyGIVmWEVmSyGERPYWdmSNQd--V-------------IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP  879 (996)
T KOG0196|consen  815 SDVWSYGIVMWEVMSYGERPYWDMSNQD--V-------------IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRP  879 (996)
T ss_pred             hhccccceEEEEecccCCCcccccchHH--H-------------HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCC
Confidence            999999999999997 888874333221  1             112222212223445556899999999999999999


Q ss_pred             CHHHHHHHHHhhCCCCcc
Q 047677          158 TMRSVVQMLEEAEPCNLV  175 (200)
Q Consensus       158 t~~~il~~L~~~~~~~~~  175 (200)
                      ++.+|+..|+++...+.+
T Consensus       880 ~F~qiV~~lDklIrnP~S  897 (996)
T KOG0196|consen  880 KFAQIVSTLDKLIRNPNS  897 (996)
T ss_pred             CHHHHHHHHHHHhcCchh
Confidence            999999999999876653


No 338
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.91  E-value=5.5e-25  Score=166.31  Aligned_cols=158  Identities=23%  Similarity=0.371  Sum_probs=106.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   +.|++|+||+|.||+++.++.++|+|||++........  ......++..|++||+..+. .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07846         108 QILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAV  182 (286)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchH
Confidence            5889999999   78999999999999999999999999999876543321  11123467889999987654 467889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhh----------hccCCCCC------chHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLT----------LVDSSIPE------TFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~------~~~~~~~~~~~  143 (200)
                      |+||||+++|++++|..||....... ..................          ...+....      ........+.+
T Consensus       183 Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (286)
T cd07846         183 DIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLD  261 (286)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHH
Confidence            99999999999999999886433211 111111000000000000          00000000      01122456888


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||..+|.+||++.++++
T Consensus       262 li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         262 LAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHhcCCcccchhHHHHhc
Confidence            999999999999999999875


No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.91  E-value=5.4e-25  Score=166.24  Aligned_cols=159  Identities=25%  Similarity=0.302  Sum_probs=107.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++++|||.+......... ......++..|++||.+.+ ..++.++
T Consensus       108 ~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~  183 (287)
T cd07840         108 QLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEV  183 (287)
T ss_pred             HHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHH
Confidence            5789999999   789999999999999999999999999998766543211 1112235778999997665 3578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhccc-ch--------hhhhccCCC--C----CchHH-HHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSK-QS--------VLTLVDSSI--P----ETFKE-NAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~--~----~~~~~-~~~~~~~  143 (200)
                      |+||||+++|++++|..||...... .............. ..        .........  +    ..... ....+.+
T Consensus       184 Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (287)
T cd07840         184 DMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALD  262 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHH
Confidence            9999999999999999999754321 11111110000000 00        000000000  0    00111 1457889


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||..+|.+||++.++++
T Consensus       263 ~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         263 LLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHcCCChhhCcCHHHHhh
Confidence            999999999999999999875


No 340
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.91  E-value=1e-24  Score=178.22  Aligned_cols=158  Identities=18%  Similarity=0.182  Sum_probs=98.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCC------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS------   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~------   73 (200)
                      |++.||+|||   ++||+||||||+||+++. .+.++|+|||++......... ......+++.|+|||.+...      
T Consensus       263 qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~  338 (566)
T PLN03225        263 QILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSA  338 (566)
T ss_pred             HHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCC
Confidence            5789999999   899999999999999985 578999999999755332211 11234578899999954321      


Q ss_pred             ----------------CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc----
Q 047677           74 ----------------KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET----  133 (200)
Q Consensus        74 ----------------~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  133 (200)
                                      .+..++|+||+||++|+|+++..++...   ...+...+.....................    
T Consensus       339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  415 (566)
T PLN03225        339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRG  415 (566)
T ss_pred             ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhh
Confidence                            1334569999999999999876554321   01111111100000000111111111100    


Q ss_pred             ---hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          134 ---FKENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       134 ---~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                         .........+|+.+||+.||.+|||+.++++.
T Consensus       416 ~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        416 FEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             hhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence               00111234579999999999999999999874


No 341
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91  E-value=1.5e-25  Score=175.90  Aligned_cols=156  Identities=29%  Similarity=0.401  Sum_probs=116.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.||+|||   +++++||||-..|||++..+.+|++|||++.....-  ........-...|+|||.+....++.++|
T Consensus       270 ~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~--~~~~~~~klPirWLAPEtl~~~~~s~kTD  344 (474)
T KOG0194|consen  270 DAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY--VMKKFLKKLPIRWLAPETLNTGIFSFKTD  344 (474)
T ss_pred             HHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcce--eeccccccCcceecChhhhccCccccccc
Confidence            5789999999   899999999999999999999999999998654310  11110111356899999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |||||+++||+++ |..||......  ....++.         ........   +......+..++.+||..+|++|||+
T Consensus       345 V~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~---------~~~~r~~~---~~~~p~~~~~~~~~c~~~~p~~R~tm  410 (474)
T KOG0194|consen  345 VWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIV---------KNGYRMPI---PSKTPKELAKVMKQCWKKDPEDRPTM  410 (474)
T ss_pred             hhheeeeEEeeeccCCCCCCCCCHH--HHHHHHH---------hcCccCCC---CCCCHHHHHHHHHHhccCChhhccCH
Confidence            9999999999998 78898754322  1222111         00111111   22334466678889999999999999


Q ss_pred             HHHHHHHHhhCCCCcc
Q 047677          160 RSVVQMLEEAEPCNLV  175 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~  175 (200)
                      .++.+.|+.+......
T Consensus       411 ~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  411 STIKKKLEALEKKKEA  426 (474)
T ss_pred             HHHHHHHHHHHhcccc
Confidence            9999999998887664


No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91  E-value=4.9e-25  Score=166.90  Aligned_cols=154  Identities=25%  Similarity=0.305  Sum_probs=110.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC--CCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK--VDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~--~~~~   78 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||++......... ......++..|++||...+..  .+.+
T Consensus       113 ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (288)
T cd05583         113 EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKA  188 (288)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcch
Confidence            5789999999   899999999999999999999999999988665433211 111234688899999876654  6788


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+||||+++|++++|..||........ ..........        .....+   ......+.+++.+||+.||++|||
T Consensus       189 ~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~--------~~~~~~---~~~~~~l~~li~~~l~~~p~~R~t  256 (288)
T cd05583         189 VDWWSLGVLTFELLTGASPFTVDGEQNS-QSEISRRILK--------SKPPFP---KTMSAEARDFIQKLLEKDPKKRLG  256 (288)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccCcccch-HHHHHHHHHc--------cCCCCC---cccCHHHHHHHHHHhcCCHhhccC
Confidence            9999999999999999999964321110 0111000000        011111   222346778999999999999999


Q ss_pred             HHHHHHHHHhhC
Q 047677          159 MRSVVQMLEEAE  170 (200)
Q Consensus       159 ~~~il~~L~~~~  170 (200)
                      +.++.+.|+...
T Consensus       257 ~~~~~~~l~~~~  268 (288)
T cd05583         257 ANGADEIKNHPF  268 (288)
T ss_pred             cchHHHHhcCcc
Confidence            998888776643


No 343
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91  E-value=1.1e-24  Score=162.53  Aligned_cols=143  Identities=27%  Similarity=0.459  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||+|+||+++. +.++|+|||.+.........  .....++..|++||...+..++.++|
T Consensus       114 ~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~D  187 (260)
T cd08222         114 QLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDL--ATTFTGTPYYMSPEALKHQGYDSKSD  187 (260)
T ss_pred             HHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCCCccc--ccCCCCCcCccCHHHHccCCCCchhh
Confidence            5789999999   899999999999999975 67999999988665432221  11234678899999988777888999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||+|+++|++++|..||.....  .....             .......+.........+.+++.+||..+|++||++.
T Consensus       188 v~slG~~~~~l~~~~~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  252 (260)
T cd08222         188 IWSLGCILYEMCCLAHAFEGQNF--LSVVL-------------RIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAA  252 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccH--HHHHH-------------HHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHH
Confidence            99999999999999999863211  10000             0111111222233345788899999999999999999


Q ss_pred             HHHH
Q 047677          161 SVVQ  164 (200)
Q Consensus       161 ~il~  164 (200)
                      ++++
T Consensus       253 ~il~  256 (260)
T cd08222         253 EILR  256 (260)
T ss_pred             HHhh
Confidence            9875


No 344
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.91  E-value=3.7e-25  Score=170.86  Aligned_cols=149  Identities=23%  Similarity=0.336  Sum_probs=103.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-----CCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-----SKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-----~~~   75 (200)
                      |++.||+|||   ++|++||||||+||+++.++.++|+|||++......... ......|+..|+|||++.+     ..+
T Consensus       110 qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05624         110 EMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKY  185 (331)
T ss_pred             HHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCC
Confidence            5789999999   899999999999999999999999999998765433221 1122458899999998765     356


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      +.++|+||+||++|++++|..||......  .....+   ....      .....+.........+.+++.+|+..++.+
T Consensus       186 ~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~i---~~~~------~~~~~p~~~~~~~~~~~~li~~ll~~~~~~  254 (331)
T cd05624         186 GPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKI---MNHE------ERFQFPSHITDVSEEAKDLIQRLICSRERR  254 (331)
T ss_pred             CCcccEEeeehhhhhhhhCCCCccCCCHH--HHHHHH---HcCC------CcccCCCccccCCHHHHHHHHHHccCchhh
Confidence            78999999999999999999999643211  111000   0000      001122222233456778888988865544


Q ss_pred             --CCCHHHHHH
Q 047677          156 --RPTMRSVVQ  164 (200)
Q Consensus       156 --Rpt~~~il~  164 (200)
                        |++++++++
T Consensus       255 ~~~~~~~~~~~  265 (331)
T cd05624         255 LGQNGIEDFKK  265 (331)
T ss_pred             cCCCCHHHHhc
Confidence              467777764


No 345
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.91  E-value=1.7e-24  Score=163.27  Aligned_cols=158  Identities=23%  Similarity=0.288  Sum_probs=107.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.........  .....++..|+|||...+. .++.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  180 (282)
T cd07829         106 QLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT--YTHEVVTLWYRAPEILLGSKHYSTAV  180 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc--cCccccCcCcCChHHhcCCcCCCccc
Confidence            5789999999   789999999999999999999999999998765432211  1112346779999988766 678899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccch-------h--hhhccCCCCCc-----hHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQS-------V--LTLVDSSIPET-----FKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~-----~~~~~~~~~~li  145 (200)
                      |+||||++++++++|..||....... ...............       .  .....+.....     .......+.+++
T Consensus       181 Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  259 (282)
T cd07829         181 DIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLL  259 (282)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHH
Confidence            99999999999999999986533211 111111000000000       0  00000011010     112245688999


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+||..||.+||++.+++.
T Consensus       260 ~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         260 SKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHhhccCcccCCCHHHHhh
Confidence            9999999999999999875


No 346
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91  E-value=4.1e-25  Score=174.95  Aligned_cols=155  Identities=25%  Similarity=0.320  Sum_probs=116.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||..|++||+   .+++|||||-..|||+..+..+||.|||+++.+.......-. ...-...|.+||.+..+.++.++|
T Consensus       373 QIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA-GAKFPIKWTAPEsLAyNtFSiKSD  448 (1157)
T KOG4278|consen  373 QISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNTFSIKSD  448 (1157)
T ss_pred             HHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc-CccCcccccCcccccccccccchh
Confidence            7889999999   788999999999999999999999999999887533211111 112345799999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|+||+++|||.| |-.||....-...            .+.+.+..+...|+   ...+..++||+.||++.|.+||++
T Consensus       449 VWAFGVLLWEIATYGMsPYPGidlSqV------------Y~LLEkgyRM~~Pe---GCPpkVYeLMraCW~WsPsDRPsF  513 (1157)
T KOG4278|consen  449 VWAFGVLLWEIATYGMSPYPGIDLSQV------------YGLLEKGYRMDGPE---GCPPKVYELMRACWNWSPSDRPSF  513 (1157)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCccHHHH------------HHHHhccccccCCC---CCCHHHHHHHHHHhcCCcccCccH
Confidence            9999999999998 6678764421110            01111111112222   223478899999999999999999


Q ss_pred             HHHHHHHHhhCCCCc
Q 047677          160 RSVVQMLEEAEPCNL  174 (200)
Q Consensus       160 ~~il~~L~~~~~~~~  174 (200)
                      +++.+.|+.+...+.
T Consensus       514 aeiHqafEtmf~~sS  528 (1157)
T KOG4278|consen  514 AEIHQAFETMFSSSS  528 (1157)
T ss_pred             HHHHHHHHHHhcccc
Confidence            999999998876654


No 347
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91  E-value=6.7e-25  Score=170.14  Aligned_cols=160  Identities=24%  Similarity=0.316  Sum_probs=103.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcce-eeeecccccccccccccC-CCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDT-THVIAGTTGYIAPEYGYT-SKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~-~~~~~   77 (200)
                      |+++||.|||   ++|++|+||||+||+++. ++.++++|||.+........... .....++..|+|||.+.. ..++.
T Consensus       122 qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  198 (342)
T cd07854         122 QLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTK  198 (342)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCc
Confidence            6889999999   899999999999999974 45789999999866532211111 111235778999997654 45778


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccc--------hhhhhcc--CCCCCc-----hHHHHHHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQ--------SVLTLVD--SSIPET-----FKENAVEIL  142 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~~-----~~~~~~~~~  142 (200)
                      ++|+|||||++|++++|..||........ .............        .......  ...+..     .......+.
T Consensus       199 ~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (342)
T cd07854         199 AIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEAL  277 (342)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHH
Confidence            99999999999999999999964432111 1111000000000        0000000  000000     112334677


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHH
Q 047677          143 RIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      +++.+||..||.+|||+.+++.
T Consensus       278 ~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         278 DFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHHHHhCCCchhccCHHHHhC
Confidence            8999999999999999999974


No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91  E-value=2.6e-24  Score=162.45  Aligned_cols=157  Identities=22%  Similarity=0.274  Sum_probs=106.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |++.+|.|||   ++|++|+||+|.||+++.++.++|+|||.+.........   ....++..|++||.+.. ..++.++
T Consensus       107 ~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~  180 (283)
T cd07830         107 QILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY---TDYVSTRWYRAPEILLRSTSYSSPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc---CCCCCcccccCceeeecCcCcCCcc
Confidence            5789999999   899999999999999999999999999998765432211   12346778999998754 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc-------ccchhhhhccCCCC----Cc----hHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN-------SKQSVLTLVDSSIP----ET----FKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~~----~~~~~~~~~~l  144 (200)
                      |+||||++++++++|..||......+.. .........       .............+    ..    .......+.++
T Consensus       181 Di~s~G~~l~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  259 (283)
T cd07830         181 DIWALGCIMAELYTLRPLFPGSSEIDQL-YKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDL  259 (283)
T ss_pred             chhhHHHHHHHHHhCCCccCCCChHHHH-HHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHH
Confidence            9999999999999999998654322111 100000000       00000000000000    00    11123568899


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+||+.+|.+|||+.+++.
T Consensus       260 i~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         260 IKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHhcccCcccCCCHHHHhh
Confidence            99999999999999999875


No 349
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.91  E-value=8.5e-25  Score=165.12  Aligned_cols=158  Identities=24%  Similarity=0.333  Sum_probs=106.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||.+.+. .++.++
T Consensus       108 qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~  182 (284)
T cd07836         108 QLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSI  182 (284)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHH
Confidence            5789999999   89999999999999999999999999999865433211  11112357789999987654 467899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchh------hhhccCCCCCc--------hHHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSV------LTLVDSSIPET--------FKENAVEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--------~~~~~~~~~~li  145 (200)
                      |+||||+++|++++|..||........ ...............      ........+..        .......+.+++
T Consensus       183 Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  261 (284)
T cd07836         183 DIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLL  261 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHH
Confidence            999999999999999999975432211 111111000000000      00001111111        112234677899


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      .+|++.||.+||++.++++
T Consensus       262 ~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         262 HRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHhcCCcccCCCHHHHhc
Confidence            9999999999999999874


No 350
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=5.3e-25  Score=173.22  Aligned_cols=142  Identities=31%  Similarity=0.447  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |.++||+|||   +++.||||||..||+++..|.+||+|||.+.....      ...++||+.|+|||++.   .+.|+-
T Consensus       134 gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdg  204 (948)
T KOG0577|consen  134 GALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDG  204 (948)
T ss_pred             HHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc------hhcccCCccccchhHheeccccccCC
Confidence            4678999999   89999999999999999999999999999865542      33467999999999875   356899


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ++||||||++..++...++|+.....  .+....+          .....+.+.  ..+....|+.|+..||+.-|.+||
T Consensus       205 kvDvWSLGITCIELAERkPPlFnMNA--MSALYHI----------AQNesPtLq--s~eWS~~F~~Fvd~CLqKipqeRp  270 (948)
T KOG0577|consen  205 KVDVWSLGITCIELAERKPPLFNMNA--MSALYHI----------AQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQERP  270 (948)
T ss_pred             ccceeeccchhhhhhhcCCCccCchH--HHHHHHH----------HhcCCCCCC--CchhHHHHHHHHHHHHhhCcccCC
Confidence            99999999999999999999764321  1111111          011112221  344556788899999999999999


Q ss_pred             CHHHHHHH
Q 047677          158 TMRSVVQM  165 (200)
Q Consensus       158 t~~~il~~  165 (200)
                      |.++++..
T Consensus       271 tse~ll~H  278 (948)
T KOG0577|consen  271 TSEELLKH  278 (948)
T ss_pred             cHHHHhhc
Confidence            99988753


No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.91  E-value=2.5e-24  Score=167.10  Aligned_cols=156  Identities=23%  Similarity=0.315  Sum_probs=106.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||||.||+++.++.++|+|||++......     .....++..|++||...+ ..++.++
T Consensus       128 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (345)
T cd07877         128 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTV  199 (345)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchh
Confidence            6789999999   899999999999999999999999999998654321     112346788999998765 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhc-----------cCCCCCc-----hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLV-----------DSSIPET-----FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~  143 (200)
                      |+|||||++|++++|..||...... .....................           ....+..     .......+.+
T Consensus       200 DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (345)
T cd07877         200 DIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD  278 (345)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHH
Confidence            9999999999999999999643221 111111100000000000000           0011110     0112346788


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ++.+|++.||.+|||+.+++..
T Consensus       279 li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         279 LLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHcCCChhhcCCHHHHhcC
Confidence            9999999999999999998764


No 352
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91  E-value=1.9e-24  Score=165.73  Aligned_cols=141  Identities=30%  Similarity=0.465  Sum_probs=103.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc---CCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY---TSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~   77 (200)
                      |++.||+|||   ++|++|+||+|.||++..++.++|+|||.+......      ....++..|++||.+.   ...++.
T Consensus       129 qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~  199 (313)
T cd06633         129 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA------NSFVGTPYWMAPEVILAMDEGQYDG  199 (313)
T ss_pred             HHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC------CCccccccccChhhccccCCCCCCc
Confidence            5789999999   889999999999999999999999999987543211      1234678899999874   345778


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ++|+||||+++|++++|..||........  .....             ....+.. .......+.+++.+||+.+|.+|
T Consensus       200 ~sDv~slGvil~el~~g~~p~~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R  264 (313)
T cd06633         200 KVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIA-------------QNDSPTLQSNEWTDSFRGFVDYCLQKIPQER  264 (313)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH-------------hcCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence            99999999999999999999865422111  00000             0001111 11122357789999999999999


Q ss_pred             CCHHHHHHH
Q 047677          157 PTMRSVVQM  165 (200)
Q Consensus       157 pt~~~il~~  165 (200)
                      |++.+++..
T Consensus       265 p~~~~~l~~  273 (313)
T cd06633         265 PASAELLRH  273 (313)
T ss_pred             cCHHHHhcC
Confidence            999999853


No 353
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.91  E-value=1.1e-24  Score=165.54  Aligned_cols=158  Identities=23%  Similarity=0.271  Sum_probs=104.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~   78 (200)
                      |++.||+|||   ++|++|+||+|+||+++. ++.++|+|||++........  ......++..|++||.+.+. .++.+
T Consensus       110 qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~  184 (294)
T PLN00009        110 QILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTP  184 (294)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcH
Confidence            5789999999   889999999999999985 45689999999865533211  11112357789999987654 46789


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchh-------hh--hccCCCCCc-----hHHHHHHHHHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSV-------LT--LVDSSIPET-----FKENAVEILRI  144 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~-----~~~~~~~~~~l  144 (200)
                      +|+||+|+++|++++|..||......+ ................       ..  ......+..     .......+.++
T Consensus       185 ~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (294)
T PLN00009        185 VDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDL  263 (294)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHH
Confidence            999999999999999999997543221 1111111000000000       00  000000000     11223457889


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +.+|++.+|++||++.++++
T Consensus       264 i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        264 LSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999999886


No 354
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=5.9e-25  Score=162.23  Aligned_cols=135  Identities=30%  Similarity=0.449  Sum_probs=104.4

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+.||.|||   +++||+||||.+|.+++++|.+|+.|||++......+.  ......||+.|+|||++....|..++|.
T Consensus       277 IvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~--t~kTFCGTPEYLAPEVleDnDYgraVDW  351 (516)
T KOG0690|consen  277 IVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD--TTKTFCGTPEYLAPEVLEDNDYGRAVDW  351 (516)
T ss_pred             HHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcccccc--eeccccCChhhcCchhhccccccceeeh
Confidence            678999999   89999999999999999999999999999976554332  2334569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      |.+|+++|||++|+.||+...+.  .+.+.+.           ..+-.+|....+   +...++..+|..||.+|.
T Consensus       352 WG~GVVMYEMmCGRLPFyn~dh~--kLFeLIl-----------~ed~kFPr~ls~---eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  352 WGVGVVMYEMMCGRLPFYNKDHE--KLFELIL-----------MEDLKFPRTLSP---EAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             hhhhHHHHHHHhccCcccccchh--HHHHHHH-----------hhhccCCccCCH---HHHHHHHHHhhcChHhhc
Confidence            99999999999999999754332  1111111           011233333333   444566689999999996


No 355
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.91  E-value=1.5e-24  Score=165.22  Aligned_cols=159  Identities=26%  Similarity=0.287  Sum_probs=106.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~   79 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+......... ......++..|++||...+. .++.++
T Consensus       124 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~  199 (302)
T cd07864         124 QLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAI  199 (302)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchh
Confidence            5789999999   899999999999999999999999999998765433211 11112346789999987543 467889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccch-hhhhc--------------cCCCCCchHHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQS-VLTLV--------------DSSIPETFKENAVEILRI  144 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~l  144 (200)
                      |+|||||+++++++|+.||...... ................ .....              ..............+.++
T Consensus       200 Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  278 (302)
T cd07864         200 DVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDL  278 (302)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHH
Confidence            9999999999999999999743211 1111111100000000 00000              000000011123568889


Q ss_pred             HHHhcCCCCCCCCCHHHHHH
Q 047677          145 AVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       145 i~~cl~~dp~~Rpt~~~il~  164 (200)
                      +..||+.||.+|||+.++++
T Consensus       279 i~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         279 LDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHccCChhhCCCHHHHhc
Confidence            99999999999999999875


No 356
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91  E-value=1.6e-24  Score=178.56  Aligned_cols=152  Identities=30%  Similarity=0.458  Sum_probs=114.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeee-cccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVI-AGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~-~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      ||+.|++||.   +..++||||-..||++..+..+|++|||+++.............. .-...|+|||.+....++.++
T Consensus       426 QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kS  502 (609)
T KOG0200|consen  426 QIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKS  502 (609)
T ss_pred             HHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccc
Confidence            7999999999   788999999999999999999999999999765443222211110 013469999999999999999


Q ss_pred             chhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+||||+++||+++ |..||..... ..++..++.             .+.....+.....+++.+|..||+.+|++||+
T Consensus       503 DVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~~l~-------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~  568 (609)
T KOG0200|consen  503 DVWSFGILLWEIFTLGGTPYPGIPP-TEELLEFLK-------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPT  568 (609)
T ss_pred             hhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCC
Confidence            99999999999998 8888865211 111111111             11111222223558889999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      +.++.+.|+..
T Consensus       569 F~~~~~~~~~~  579 (609)
T KOG0200|consen  569 FSECVEFFEKH  579 (609)
T ss_pred             HHHHHHHHHHH
Confidence            99999999995


No 357
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=7.4e-25  Score=169.59  Aligned_cols=137  Identities=25%  Similarity=0.380  Sum_probs=104.9

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      +++|++|||   ++|||+|||||+|++++.+|-+||.|||+++......   ..+.+.||+.|.|||++...+...++|.
T Consensus       529 v~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIILnKGHD~avDy  602 (732)
T KOG0614|consen  529 VLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIILNKGHDRAVDY  602 (732)
T ss_pred             HHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccccchhhhccCcchhhHH
Confidence            578999999   8999999999999999999999999999998877543   3445679999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      ||||+++||+++|.+||.....  ....+.++...+    .     -.+   ++.......+++.++...+|.+|.-
T Consensus       603 WaLGIli~ELL~G~pPFs~~dp--mktYn~ILkGid----~-----i~~---Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  603 WALGILIYELLTGSPPFSGVDP--MKTYNLILKGID----K-----IEF---PRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHHHHHcCCCCCCCCch--HHHHHHHHhhhh----h-----hhc---ccccchhHHHHHHHHHhcCcHhhhc
Confidence            9999999999999999985432  111111110000    0     011   1222234556777788899999986


No 358
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.91  E-value=2e-24  Score=167.56  Aligned_cols=155  Identities=25%  Similarity=0.339  Sum_probs=106.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.......     ....++..|++||...+ ..++.++
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07851         126 QILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccccccccc-----cCCcccccccCHHHHhCCCCCCchH
Confidence            5789999999   8999999999999999999999999999987654321     11235778999998765 3577899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccch------------hhhhccCC----CCCchHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQS------------VLTLVDSS----IPETFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~  143 (200)
                      |+||||+++|++++|..||....... .+.............            ........    +..........+.+
T Consensus       198 DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~d  276 (343)
T cd07851         198 DIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAID  276 (343)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHH
Confidence            99999999999999999996443211 111110000000000            00000000    00001122457889


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+||+.||.+|||+.+++.
T Consensus       277 li~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         277 LLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHhCCCChhhCCCHHHHhc
Confidence            999999999999999999876


No 359
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91  E-value=1.3e-24  Score=160.42  Aligned_cols=131  Identities=28%  Similarity=0.302  Sum_probs=98.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   ++|++|+||||+||+++.++.++++|||.+........     ...++..|++||...+..++.++|
T Consensus        93 ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  164 (237)
T cd05576          93 EMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-----GEAVENMYCAPEVGGISEETEACD  164 (237)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc-----cCCcCccccCCcccCCCCCCchhh
Confidence            5789999999   89999999999999999999999999998755433211     122456799999988777889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||+|+++|++++|..|+......                 .........+..   ....+.+++.+||+.||++||++
T Consensus       165 vwslG~il~el~~g~~~~~~~~~~-----------------~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         165 WWSLGAILFELLTGKTLVECHPSG-----------------INTHTTLNIPEW---VSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHHHHHHHHHCcchhhcCchh-----------------cccccccCCccc---CCHHHHHHHHHHccCCHHHhcCC
Confidence            999999999999999886532100                 000000111211   23467789999999999999996


No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.91  E-value=1.6e-24  Score=167.46  Aligned_cols=159  Identities=23%  Similarity=0.279  Sum_probs=107.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC------------cceeeeecccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG------------KDTTHVIAGTTGYIAPE   68 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~------------~~~~~~~~~~~~~~~pE   68 (200)
                      |++.||+|||   ++|++|+||+|.||+++.++.++|+|||.+........            ........++..|++||
T Consensus       127 ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  203 (335)
T PTZ00024        127 QILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPE  203 (335)
T ss_pred             HHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCCh
Confidence            5789999999   89999999999999999999999999999876541110            01111123567899999


Q ss_pred             cccCCC-CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchh----------hhhccCCCCCc----
Q 047677           69 YGYTSK-VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSV----------LTLVDSSIPET----  133 (200)
Q Consensus        69 ~~~~~~-~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----  133 (200)
                      .+.+.. ++.++|+|||||++|++++|..||.......  ....+..........          ........+..    
T Consensus       204 ~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (335)
T PTZ00024        204 LLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID--QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTI  281 (335)
T ss_pred             hcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHh
Confidence            887643 6889999999999999999999997543221  111111000000000          00000000111    


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          134 FKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       134 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      .......+.+++.+||..+|++|||+++++.
T Consensus       282 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        282 FPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            1122356788999999999999999999986


No 361
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91  E-value=2.4e-24  Score=161.24  Aligned_cols=145  Identities=22%  Similarity=0.312  Sum_probs=105.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC-cceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG-KDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||++........ ........++..|++||.+.+..++.++
T Consensus       114 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (264)
T cd06653         114 QILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKA  190 (264)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccc
Confidence            5789999999   89999999999999999999999999999875432111 1111123478889999999888888999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhcc-CCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVD-SSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      |+|||||++|++++|..||.......    ..           ..... +..+..+......+.+++.+||. +|..|||
T Consensus       191 Di~slG~il~~l~~g~~p~~~~~~~~----~~-----------~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~  254 (264)
T cd06653         191 DVWSVACTVVEMLTEKPPWAEYEAMA----AI-----------FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT  254 (264)
T ss_pred             cHHHHHHHHHHHHhCCCCCCccCHHH----HH-----------HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc
Confidence            99999999999999999996432110    00           00010 11111222334567788889999 5799999


Q ss_pred             HHHHHH
Q 047677          159 MRSVVQ  164 (200)
Q Consensus       159 ~~~il~  164 (200)
                      +.+++.
T Consensus       255 ~~~~~~  260 (264)
T cd06653         255 AEFLLR  260 (264)
T ss_pred             HHHHhc
Confidence            998765


No 362
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.8e-24  Score=171.69  Aligned_cols=144  Identities=26%  Similarity=0.402  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~   75 (200)
                      |++.||.|||   +++|||||||..||++..+|.++|+|||.+.....  +......++||+.|+|||+..     ...|
T Consensus       138 q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PY  212 (1187)
T KOG0579|consen  138 QVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPY  212 (1187)
T ss_pred             HHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchh--HHhhhccccCCcccccchheeeccccCCCc
Confidence            5789999999   89999999999999999999999999999855432  222334567999999999754     4568


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCC---chHHHHHHHHHHHHHhcCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPE---TFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~d  152 (200)
                      ..++||||||+++.+|..+.+|-.....     +..+.          . +...-|+   .+......|.+++..||..|
T Consensus       213 DykaDiWSlGITLIEMAqiEPPHhelnp-----MRVll----------K-iaKSePPTLlqPS~Ws~~F~DfLk~cL~Kn  276 (1187)
T KOG0579|consen  213 DYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLL----------K-IAKSEPPTLLQPSHWSRSFSDFLKRCLVKN  276 (1187)
T ss_pred             hhhhhHHhhhhHHHHHhccCCCccccch-----HHHHH----------H-HhhcCCCcccCcchhhhHHHHHHHHHHhcC
Confidence            9999999999999999999888643211     11111          1 1111111   24445557788888999999


Q ss_pred             CCCCCCHHHHHHH
Q 047677          153 PALRPTMRSVVQM  165 (200)
Q Consensus       153 p~~Rpt~~~il~~  165 (200)
                      |..||+++++++.
T Consensus       277 p~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  277 PRNRPPAAQLLKH  289 (1187)
T ss_pred             CccCCCHHHHhhC
Confidence            9999999998753


No 363
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.90  E-value=1.2e-24  Score=164.68  Aligned_cols=142  Identities=27%  Similarity=0.412  Sum_probs=109.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCC-CCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV-DEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~-~~~~   79 (200)
                      ||+.|+-|+|   +++++|||||.+||+++.++++|+.|||++..+....   ....+.|++-|++||++.+..| .+.+
T Consensus       161 QIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEV  234 (668)
T KOG0611|consen  161 QIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEV  234 (668)
T ss_pred             HHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCcc
Confidence            7889999999   8999999999999999999999999999997665322   2223558999999999999887 4779


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |.||||+++|-++.|..||+.....     ..+.          .+-.+.+.+.  +...+...||.+||..+|++|-|+
T Consensus       235 DsWsLGvLLYtLVyGtMPFDG~Dhk-----~lvr----------QIs~GaYrEP--~~PSdA~gLIRwmLmVNP~RRATi  297 (668)
T KOG0611|consen  235 DSWSLGVLLYTLVYGTMPFDGRDHK-----RLVR----------QISRGAYREP--ETPSDASGLIRWMLMVNPERRATI  297 (668)
T ss_pred             chhhHHHHHHHHhhcccccCCchHH-----HHHH----------HhhcccccCC--CCCchHHHHHHHHHhcCcccchhH
Confidence            9999999999999999999854321     1111          1112222221  111245568889999999999999


Q ss_pred             HHHHHH
Q 047677          160 RSVVQM  165 (200)
Q Consensus       160 ~~il~~  165 (200)
                      .+|...
T Consensus       298 eDiAsH  303 (668)
T KOG0611|consen  298 EDIASH  303 (668)
T ss_pred             HHHhhh
Confidence            988654


No 364
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.90  E-value=2.1e-24  Score=162.52  Aligned_cols=145  Identities=26%  Similarity=0.439  Sum_probs=107.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc------------------ceeeeecccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK------------------DTTHVIAGTT   62 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~------------------~~~~~~~~~~   62 (200)
                      |++.||+|||   ++|++|+||+|+||+++.++.++|+|||.+.........                  .......++.
T Consensus       110 ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (280)
T cd05581         110 EILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA  186 (280)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCc
Confidence            5789999999   899999999999999999999999999998765432210                  1112234678


Q ss_pred             cccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHH
Q 047677           63 GYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEIL  142 (200)
Q Consensus        63 ~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (200)
                      .|++||......++.++|+||||++++++++|..||...... ..+ ...   .        ......+..   ....+.
T Consensus       187 ~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~-~~~---~--------~~~~~~~~~---~~~~~~  250 (280)
T cd05581         187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTF-QKI---L--------KLEYSFPPN---FPPDAK  250 (280)
T ss_pred             cccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHH-HHH---H--------hcCCCCCCc---cCHHHH
Confidence            899999988877888999999999999999999999754311 000 000   0        011112221   244678


Q ss_pred             HHHHHhcCCCCCCCCCH----HHHHH
Q 047677          143 RIAVLCTTTQPALRPTM----RSVVQ  164 (200)
Q Consensus       143 ~li~~cl~~dp~~Rpt~----~~il~  164 (200)
                      +++.+||+.+|.+|||+    ++++.
T Consensus       251 ~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         251 DLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            89999999999999999    77654


No 365
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.90  E-value=1.9e-24  Score=169.62  Aligned_cols=158  Identities=23%  Similarity=0.336  Sum_probs=122.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||+.|++||.   +.++||||+-+.||+++..+++|++|||.++-+.............-..+|+|+|.+.-++++.++|
T Consensus       645 qiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSD  721 (807)
T KOG1094|consen  645 QIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASD  721 (807)
T ss_pred             HHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhh
Confidence            7899999999   8999999999999999999999999999998777666666555555678999999999999999999


Q ss_pred             hhhHhHHHHHHHh--CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVT--GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+||+++||+++  ...||....++  ...+-..++.......      .++..+......++++|..||.+|-.+|||
T Consensus       722 vWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~------~~l~~P~~cp~~lyelml~Cw~~es~~RPs  793 (807)
T KOG1094|consen  722 VWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQ------VVLSRPPACPQGLYELMLRCWRRESEQRPS  793 (807)
T ss_pred             hhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcc------eeccCCCcCcHHHHHHHHHHhchhhhcCCC
Confidence            9999999999886  66788754332  2222112222222221      122223334457889999999999999999


Q ss_pred             HHHHHHHHHhh
Q 047677          159 MRSVVQMLEEA  169 (200)
Q Consensus       159 ~~~il~~L~~~  169 (200)
                      ++++...|.+.
T Consensus       794 Fe~lh~~lq~~  804 (807)
T KOG1094|consen  794 FEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHHHHh
Confidence            99999998764


No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.90  E-value=4.1e-24  Score=158.43  Aligned_cols=140  Identities=33%  Similarity=0.434  Sum_probs=104.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||.+........  ......++..|++||...+...+.++|
T Consensus       101 qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D  175 (250)
T cd05123         101 EIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVD  175 (250)
T ss_pred             HHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhh
Confidence            5789999999   79999999999999999999999999999876543211  112234677899999988888888999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++|++++|..||.....  ......+.   .        .....+..   ....+.+++.+||..||++||++.
T Consensus       176 ~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~---~--------~~~~~~~~---~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         176 WWSLGVLLYEMLTGKPPFYAEDR--KEIYEKIL---K--------DPLRFPEF---LSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHh---c--------CCCCCCCC---CCHHHHHHHHHHhcCCHhhCCCcc
Confidence            99999999999999999964322  11111110   0        01111222   134678899999999999999994


Q ss_pred             H
Q 047677          161 S  161 (200)
Q Consensus       161 ~  161 (200)
                      +
T Consensus       240 ~  240 (250)
T cd05123         240 G  240 (250)
T ss_pred             c
Confidence            4


No 367
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.90  E-value=1.2e-23  Score=162.29  Aligned_cols=156  Identities=27%  Similarity=0.344  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|.||+++.++.++|+|||.+.......     ....++..|++||.+.+ ..++.++
T Consensus       116 ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  187 (328)
T cd07856         116 QILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEV  187 (328)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHH
Confidence            5789999999   8999999999999999999999999999986543211     11235778999998765 4578899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc------------ccchhhhhccCCCCCc----hHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN------------SKQSVLTLVDSSIPET----FKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~~  143 (200)
                      |+||||+++|++++|..||....... ...........            .............+..    .......+.+
T Consensus       188 Dv~slG~il~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (328)
T cd07856         188 DIWSAGCIFAEMLEGKPLFPGKDHVN-QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAID  266 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHH
Confidence            99999999999999999996543211 01000000000            0000000010000100    1112357888


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ++.+||+.+|++|||+.+++..
T Consensus       267 li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         267 LLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHcCCChhhCCCHHHHhcC
Confidence            9999999999999999988654


No 368
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.90  E-value=2.5e-24  Score=162.09  Aligned_cols=152  Identities=26%  Similarity=0.316  Sum_probs=115.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++.|++|||   ++|+||.||-..|++|++..++||+|-.+++.+-...........-....|+++|.+....|+..+|
T Consensus       404 Qla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasD  480 (563)
T KOG1024|consen  404 QLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASD  480 (563)
T ss_pred             HHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhh
Confidence            6788999999   8999999999999999999999999988886654333222222222466899999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++||+++ |+.||........  ..+             +.++-....+.+..++++.+|.-||+.+|++||++
T Consensus       481 vWsfGVllWELmtlg~~PyaeIDPfEm--~~y-------------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf  545 (563)
T KOG1024|consen  481 VWSFGVLLWELMTLGKLPYAEIDPFEM--EHY-------------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSF  545 (563)
T ss_pred             hHHHHHHHHHHHhcCCCCccccCHHHH--HHH-------------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCH
Confidence            9999999999998 8899864432211  111             11111122244445689999999999999999999


Q ss_pred             HHHHHHHHhhC
Q 047677          160 RSVVQMLEEAE  170 (200)
Q Consensus       160 ~~il~~L~~~~  170 (200)
                      ++++.-|.++.
T Consensus       546 ~Qlv~cLseF~  556 (563)
T KOG1024|consen  546 SQLVICLSEFH  556 (563)
T ss_pred             HHHHHHHHHHH
Confidence            99998887653


No 369
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90  E-value=6.1e-24  Score=161.08  Aligned_cols=148  Identities=25%  Similarity=0.316  Sum_probs=103.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC--CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS--KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~--~~~~~   78 (200)
                      |+++||.|||   +.|++|+||+|.||+++.++.++|+|||++........ .......++..|++||.....  .++.+
T Consensus       113 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (290)
T cd05613         113 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKA  188 (290)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCCCCcc
Confidence            5889999999   89999999999999999999999999999866433211 111223478889999987653  35678


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC-
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP-  157 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  157 (200)
                      +|+||||+++|++++|..||....... ...........        ....+   +......+.+++.+||+.||++|| 
T Consensus       189 ~Dv~slG~~l~~ll~g~~p~~~~~~~~-~~~~~~~~~~~--------~~~~~---~~~~~~~~~~ll~~~l~~~p~~R~~  256 (290)
T cd05613         189 VDWWSMGVLMYELLTGASPFTVDGEKN-SQAEISRRILK--------SEPPY---PQEMSALAKDIIQRLLMKDPKKRLG  256 (290)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCcCCccc-cHHHHHHHhhc--------cCCCC---CccCCHHHHHHHHHHhcCCHHHhcC
Confidence            999999999999999999986422111 11111110000        01111   122334677899999999999997 


Q ss_pred             ----CHHHHHH
Q 047677          158 ----TMRSVVQ  164 (200)
Q Consensus       158 ----t~~~il~  164 (200)
                          ++.+++.
T Consensus       257 ~~~~~~~~l~~  267 (290)
T cd05613         257 CGPSDADEIKK  267 (290)
T ss_pred             CCCCCHHHHHc
Confidence                5565544


No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.90  E-value=8.4e-24  Score=164.06  Aligned_cols=160  Identities=23%  Similarity=0.287  Sum_probs=108.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-CCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-SKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~   79 (200)
                      |+++||+|||   ++|++|+||+|+||+++.++.++|+|||++.......     ....++..|++||.+.+ ..++.++
T Consensus       126 qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07880         126 QMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTV  197 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc-----cccccCCcccCHHHHhCCCCCCcHH
Confidence            6889999999   8999999999999999999999999999987543221     12235778999998765 3478899


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccch------------hhhhccCCCCC----chHHHHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQS------------VLTLVDSSIPE----TFKENAVEILR  143 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~----~~~~~~~~~~~  143 (200)
                      |+||||+++|++++|..||........ ..............            ....+....+.    ........+.+
T Consensus       198 Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (343)
T cd07880         198 DIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVN  276 (343)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHH
Confidence            999999999999999999975432111 11110000000000            00000000000    01122345788


Q ss_pred             HHHHhcCCCCCCCCCHHHHH--HHHHhh
Q 047677          144 IAVLCTTTQPALRPTMRSVV--QMLEEA  169 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il--~~L~~~  169 (200)
                      ++.+|++.||.+|||+.+++  ..++..
T Consensus       277 li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         277 VLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence            99999999999999999998  344444


No 371
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.90  E-value=5.5e-25  Score=158.11  Aligned_cols=149  Identities=29%  Similarity=0.418  Sum_probs=107.5

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC--CCCCccc
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS--KVDEKSD   80 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~--~~~~~~D   80 (200)
                      +.||.||.+  ...|+|||+||+||+++..|.+||+|||++..+..+--..   .-.|...|+|||.+...  +|..++|
T Consensus       177 V~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT---~daGCrpYmAPERi~p~~~gyDiRSD  251 (361)
T KOG1006|consen  177 VDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT---VDAGCRPYMAPERIDPSDKGYDIRSD  251 (361)
T ss_pred             hhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh---hccCCccccChhccCCccCCcchhhh
Confidence            578999997  5679999999999999999999999999987665321111   12367889999987643  5889999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      +||||+++||+.||..||..+...-..++..+.    ...   ..+..  +.........+.+++.-|+..|..+||...
T Consensus       252 vWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~----gdp---p~l~~--~~~~~~~s~~~~~fintCl~Kd~~~Rpky~  322 (361)
T KOG1006|consen  252 VWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI----GDP---PILLF--DKECVHYSFSMVRFINTCLIKDRSDRPKYD  322 (361)
T ss_pred             hhhhcceEeeeecCCCCcchHHHHHHHHHHHHc----CCC---CeecC--cccccccCHHHHHHHHHHhhcccccCcchh
Confidence            999999999999999999765432222222111    000   00000  111233456789999999999999999998


Q ss_pred             HHHHH
Q 047677          161 SVVQM  165 (200)
Q Consensus       161 ~il~~  165 (200)
                      ++..+
T Consensus       323 ~Lk~~  327 (361)
T KOG1006|consen  323 DLKKF  327 (361)
T ss_pred             hhhcC
Confidence            87653


No 372
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90  E-value=2.6e-24  Score=169.81  Aligned_cols=143  Identities=27%  Similarity=0.478  Sum_probs=111.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      ||++||.|||. |.--|+|||||..||+|+. .|.+|++|+|+|......    .....+||+.|||||... ..|...+
T Consensus       151 QILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~V  224 (632)
T KOG0584|consen  151 QILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELV  224 (632)
T ss_pred             HHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhh
Confidence            78999999995 2457999999999999965 599999999999877643    233367999999999865 6789999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchH-HHHHHHHHHHHHhcCCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFK-ENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      ||||||+.++||+|+..||....+...-              +.+...+..|..+. -..++..+||.+|+.. ..+|||
T Consensus       225 DVYaFGMCmLEMvT~eYPYsEC~n~AQI--------------YKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s  289 (632)
T KOG0584|consen  225 DVYAFGMCMLEMVTSEYPYSECTNPAQI--------------YKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS  289 (632)
T ss_pred             hhhhhhHHHHHHHhccCChhhhCCHHHH--------------HHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC
Confidence            9999999999999999999866554322              22222333333321 1234677899999999 999999


Q ss_pred             HHHHHH
Q 047677          159 MRSVVQ  164 (200)
Q Consensus       159 ~~~il~  164 (200)
                      +.++|.
T Consensus       290 a~eLL~  295 (632)
T KOG0584|consen  290 AKELLK  295 (632)
T ss_pred             HHHHhh
Confidence            999975


No 373
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.89  E-value=1.4e-23  Score=154.27  Aligned_cols=144  Identities=33%  Similarity=0.463  Sum_probs=107.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+++++.|||   +.|++|+||+|.||+++.++.++++|||.+.......   ......++..|++||......++.++|
T Consensus        95 ~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~D  168 (244)
T smart00220       95 QILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVD  168 (244)
T ss_pred             HHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhh
Confidence            4788999999   7899999999999999999999999999987765432   111234677899999988778888999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchH--HHHHHHHHHHHHhcCCCCCCCCC
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFK--ENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|++|++++++++|..||...... ........             .........  .....+.+++.+||..+|++||+
T Consensus       169 i~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  234 (244)
T smart00220      169 VWSLGVILYELLTGKPPFPGDDQL-LELFKKIG-------------KPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLT  234 (244)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHh-------------ccCCCCccccccCCHHHHHHHHHHccCCchhccC
Confidence            999999999999999998653111 11111100             011111000  03357888999999999999999


Q ss_pred             HHHHHH
Q 047677          159 MRSVVQ  164 (200)
Q Consensus       159 ~~~il~  164 (200)
                      +.++++
T Consensus       235 ~~~~~~  240 (244)
T smart00220      235 AEEALQ  240 (244)
T ss_pred             HHHHhh
Confidence            999986


No 374
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.89  E-value=1.4e-24  Score=175.88  Aligned_cols=145  Identities=27%  Similarity=0.466  Sum_probs=105.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC---C--CCeeecccccceeeccCCC-cceeeeecccccccccccccCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE---F--LKPRIADFGLARIVQSNGG-KDTTHVIAGTTGYIAPEYGYTSK   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~---~--~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~pE~~~~~~   74 (200)
                      |+++||++||   +.+||||||||.||+|..   +  ..++|.|||+++.+..... ........|+.+|.|||.+....
T Consensus       614 q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~  690 (903)
T KOG1027|consen  614 QIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR  690 (903)
T ss_pred             HHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc
Confidence            6789999999   789999999999999976   3  4568999999988765432 11222345899999999998888


Q ss_pred             CCCccchhhHhHHHHHHHhC-CCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTG-KKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      -..++||||+||++|++++| .+||......+..+..       ....+...     .. ..+.  ...+||.+|++.+|
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~-------~~~~L~~L-----~~-~~d~--eA~dLI~~ml~~dP  755 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT-------GNYTLVHL-----EP-LPDC--EAKDLISRMLNPDP  755 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc-------Cccceeee-----cc-CchH--HHHHHHHHhcCCCc
Confidence            78899999999999999995 8999754322211110       11111100     00 0111  56678889999999


Q ss_pred             CCCCCHHHHH
Q 047677          154 ALRPTMRSVV  163 (200)
Q Consensus       154 ~~Rpt~~~il  163 (200)
                      ..||++.+++
T Consensus       756 ~~RPsa~~VL  765 (903)
T KOG1027|consen  756 QLRPSATDVL  765 (903)
T ss_pred             ccCCCHHHHh
Confidence            9999999986


No 375
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.89  E-value=2e-23  Score=153.18  Aligned_cols=162  Identities=25%  Similarity=0.287  Sum_probs=107.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC----CCeeecccccceeeccCCC-cceeeeecccccccccccccCCC-
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF----LKPRIADFGLARIVQSNGG-KDTTHVIAGTTGYIAPEYGYTSK-   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~----~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~pE~~~~~~-   74 (200)
                      ||+.|+.|||   ++=++||||||.||++..+    |.+|++|+|+++.+.++-. ......++-|..|.|||.+.+.. 
T Consensus       140 Qil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h  216 (438)
T KOG0666|consen  140 QILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH  216 (438)
T ss_pred             HHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccccc
Confidence            6889999999   7889999999999999776    9999999999987765421 11112233488999999988865 


Q ss_pred             CCCccchhhHhHHHHHHHhCCCCCCCCCCCch--------hHHHHHHH-------------hhcccchhhhhcc-CCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVTGKKPIEPEYGENK--------DIVRWVCS-------------HFNSKQSVLTLVD-SSIPE  132 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~--------~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~  132 (200)
                      |+.+.|+||+||++.|+++-.+.|...+.+..        .....+.-             ............. ..+..
T Consensus       217 YT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n  296 (438)
T KOG0666|consen  217 YTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDN  296 (438)
T ss_pred             ccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCc
Confidence            78889999999999999998888865432211        01111100             0000001111111 00000


Q ss_pred             c-h-------HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          133 T-F-------KENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       133 ~-~-------~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      . .       ....+..++++.+||+.||-+|+|++++++-
T Consensus       297 ~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh  337 (438)
T KOG0666|consen  297 VSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH  337 (438)
T ss_pred             chHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence            0 0       0111236789999999999999999999875


No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=6.3e-23  Score=155.83  Aligned_cols=136  Identities=32%  Similarity=0.483  Sum_probs=103.9

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+-||-|||   ++||++||||..||+++..|.+|+.|||++..-.....  +.....||+.|+|||++....|+.++|.
T Consensus       459 iaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~--TTkTFCGTPdYiAPEIi~YqPYgksvDW  533 (683)
T KOG0696|consen  459 IAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDW  533 (683)
T ss_pred             HHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccCCc--ceeeecCCCcccccceEEecccccchhH
Confidence            567899999   89999999999999999999999999999976443322  2334569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      ||+|+++|||+.|++||+....+  .+.+-+.           .-+-.+|...+.   +...++...+...|.+|.-
T Consensus       534 Wa~GVLLyEmlaGQpPFdGeDE~--elF~aI~-----------ehnvsyPKslSk---EAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  534 WAFGVLLYEMLAGQPPFDGEDED--ELFQAIM-----------EHNVSYPKSLSK---EAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHH--HHHHHHH-----------HccCcCcccccH---HHHHHHHHHhhcCCccccC
Confidence            99999999999999999854322  1111111           112244444444   4445666888999999963


No 377
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.88  E-value=2.3e-24  Score=157.77  Aligned_cols=142  Identities=30%  Similarity=0.425  Sum_probs=110.6

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      -++||+|||   ...-+|||||..||++...|..||.|||.+..+....-.  ....+||+.|+|||++..-+|..++||
T Consensus       138 TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVI~EIGY~~~ADI  212 (502)
T KOG0574|consen  138 TLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIEEIGYDTKADI  212 (502)
T ss_pred             HHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh--hCccccCcccccHHHHHHhccchhhhH
Confidence            368999999   455699999999999999999999999998665432212  223569999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCC-CCc---hHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSI-PET---FKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ||||++..||..|++||.....-                + ..++.+.. |+.   +.....++-+++.+||..+|++|.
T Consensus       213 WSLGITaIEMAEG~PPYsDIHPM----------------R-AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~  275 (502)
T KOG0574|consen  213 WSLGITAIEMAEGRPPYSDIHPM----------------R-AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK  275 (502)
T ss_pred             hhhcchhhhhhcCCCCccccccc----------------c-eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH
Confidence            99999999999999999754211                1 11111222 222   345556788899999999999999


Q ss_pred             CHHHHHHH
Q 047677          158 TMRSVVQM  165 (200)
Q Consensus       158 t~~~il~~  165 (200)
                      |+.++++.
T Consensus       276 TA~~L~~H  283 (502)
T KOG0574|consen  276 TALRLCEH  283 (502)
T ss_pred             HHHHHhhh
Confidence            99988764


No 378
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.88  E-value=7.5e-23  Score=150.28  Aligned_cols=159  Identities=25%  Similarity=0.275  Sum_probs=109.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |++-|++|||   +.||+||||||+||++..+...|+.|||++......- ...+  ...+..|.|||++-+.++...+|
T Consensus       126 q~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~-~mtp--yVvtRyyrapevil~~~~ke~vd  199 (369)
T KOG0665|consen  126 QMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF-MMTP--YVVTRYYRAPEVILGMGYKENVD  199 (369)
T ss_pred             HHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCccc-ccCc--hhheeeccCchheeccCCcccch
Confidence            6778999999   8999999999999999999999999999997654321 1111  23467899999999988999999


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCC-------------CCchhHHHHHHH-------hhccc--chhhhhcc-CCCC---Cch
Q 047677           81 VYSFGVVLMELVTGKKPIEPEY-------------GENKDIVRWVCS-------HFNSK--QSVLTLVD-SSIP---ETF  134 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~-------------~~~~~~~~~~~~-------~~~~~--~~~~~~~~-~~~~---~~~  134 (200)
                      |||+||++.||++|...|....             ..+..+......       .....  ....+.+. ...+   +..
T Consensus       200 iwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~  279 (369)
T KOG0665|consen  200 IWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGS  279 (369)
T ss_pred             hhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCC
Confidence            9999999999999998886432             112222211110       00000  00001110 1111   112


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          135 KENAVEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       135 ~~~~~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .-.+....+++.+||..||++|.+++++|..
T Consensus       280 ~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  280 KLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             ccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence            2344557789999999999999999999864


No 379
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=3e-23  Score=150.10  Aligned_cols=157  Identities=22%  Similarity=0.351  Sum_probs=108.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      ||+.||+|||   +.||.||||||.|.++..+-.+|++|||+++........... ...-|..|.+||++++.. |+...
T Consensus       164 QILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~Av  239 (449)
T KOG0664|consen  164 QILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMT-HEVVTQYYRAPELLMGARRYTGAV  239 (449)
T ss_pred             HHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhhhhhhH-HHHHHHHhccHHHhhcchhhcCcc
Confidence            6899999999   899999999999999999999999999999876544333322 223477899999999864 89999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCC-------------chhHHHHHHHhhcccchhhhhccCCC-CCc---------hHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGE-------------NKDIVRWVCSHFNSKQSVLTLVDSSI-PET---------FKE  136 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~  136 (200)
                      ||||.||++.|++..+..|.....-             ..+.+...++     +.....++... ++.         ...
T Consensus       240 DiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE-----GAk~H~LR~~~k~Ps~~vLYtlsS~~~  314 (449)
T KOG0664|consen  240 DIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE-----GAKNHVLRAGLRAPDTQRLYKIASPDD  314 (449)
T ss_pred             ceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh-----hhHHHhhccCCCCCCccceeeecCCcc
Confidence            9999999999999877777542211             1111111111     11111111111 110         111


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 047677          137 NAVEILRIAVLCTTTQPALRPTMRSVVQML  166 (200)
Q Consensus       137 ~~~~~~~li~~cl~~dp~~Rpt~~~il~~L  166 (200)
                      .-.+...+..+++..||++|.+.++++..+
T Consensus       315 ~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  315 KNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             cchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            112345677789999999999999887764


No 380
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=2.9e-22  Score=152.84  Aligned_cols=165  Identities=25%  Similarity=0.309  Sum_probs=124.8

Q ss_pred             hhhhhhhhhcC-----CCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc--eeeeecccccccccccccCCC
Q 047677            2 AAKGLEYLHHG-----CARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD--TTHVIAGTTGYIAPEYGYTSK   74 (200)
Q Consensus         2 i~~~l~~Lh~~-----~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~   74 (200)
                      ++.||++||..     -+-.|.|||||+.||++.+++.+.++|+|++..........  ......||.+|+|||++...-
T Consensus       317 ~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdeti  396 (513)
T KOG2052|consen  317 IASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETI  396 (513)
T ss_pred             HhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhc
Confidence            57899999921     13469999999999999999999999999998766542211  122356999999999875432


Q ss_pred             ------CCCccchhhHhHHHHHHHhC----------CCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc--hHH
Q 047677           75 ------VDEKSDVYSFGVVLMELVTG----------KKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET--FKE  136 (200)
Q Consensus        75 ------~~~~~Di~slG~~~~~l~~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  136 (200)
                            .-..+||||||+++||+...          +.||....+.+.++.....      ......+++..|..  ..+
T Consensus       397 n~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrk------VVCv~~~RP~ipnrW~s~~  470 (513)
T KOG2052|consen  397 NMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRK------VVCVQKLRPNIPNRWKSDP  470 (513)
T ss_pred             ChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhc------ceeecccCCCCCcccccCH
Confidence                  12469999999999998752          5688877666666544322      33344555666665  456


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhCCC
Q 047677          137 NAVEILRIAVLCTTTQPALRPTMRSVVQMLEEAEPC  172 (200)
Q Consensus       137 ~~~~~~~li~~cl~~dp~~Rpt~~~il~~L~~~~~~  172 (200)
                      ....+.++|..||..+|.-|.|+--+-..|.++.+.
T Consensus       471 ~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  471 ALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             HHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            677889999999999999999999999999998864


No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87  E-value=1e-22  Score=151.21  Aligned_cols=95  Identities=29%  Similarity=0.532  Sum_probs=84.8

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccch
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDV   81 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di   81 (200)
                      |+-||.|||   ++||++||||..|++++..|.+||.|+|.++....++....  ...||+.|.|||++.+..|.+++|.
T Consensus       360 i~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ts--tfcgtpnyiapeilrgeeygfsvdw  434 (593)
T KOG0695|consen  360 ICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTS--TFCGTPNYIAPEILRGEEYGFSVDW  434 (593)
T ss_pred             HHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccc--cccCCCcccchhhhcccccCceehH
Confidence            566899999   89999999999999999999999999999987665544433  3559999999999999999999999


Q ss_pred             hhHhHHHHHHHhCCCCCCCC
Q 047677           82 YSFGVVLMELVTGKKPIEPE  101 (200)
Q Consensus        82 ~slG~~~~~l~~g~~pf~~~  101 (200)
                      |+||++++||+.|+.||+..
T Consensus       435 walgvlmfemmagrspfdiv  454 (593)
T KOG0695|consen  435 WALGVLMFEMMAGRSPFDIV  454 (593)
T ss_pred             HHHHHHHHHHHcCCCCccee
Confidence            99999999999999999753


No 382
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.87  E-value=5e-23  Score=143.16  Aligned_cols=104  Identities=34%  Similarity=0.466  Sum_probs=83.9

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc----CCCCCC
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY----TSKVDE   77 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~----~~~~~~   77 (200)
                      ++.||.|||+  +..++|||+||+|||++..|++|++|||++..+..+--..   .-.|...|+|||.+.    +.+|+.
T Consensus       157 vv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt---~daGCkpYmaPEri~~e~n~~gY~v  231 (282)
T KOG0984|consen  157 VVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT---MDAGCKPYMAPERINPELNQKGYSV  231 (282)
T ss_pred             HHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH---HhcCCCccCChhhcCcccCccccee
Confidence            5789999997  6789999999999999999999999999998776432111   123678899999864    336899


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVR  110 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~  110 (200)
                      ++|+||||+++.|+.+++.||..+...-..+.+
T Consensus       232 ksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq  264 (282)
T KOG0984|consen  232 KSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ  264 (282)
T ss_pred             ehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence            999999999999999999999876554443333


No 383
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.87  E-value=3.3e-22  Score=153.51  Aligned_cols=173  Identities=27%  Similarity=0.309  Sum_probs=119.1

Q ss_pred             hhhhhhhhhcCC------CCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-
Q 047677            2 AAKGLEYLHHGC------ARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-   74 (200)
Q Consensus         2 i~~~l~~Lh~~~------~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-   74 (200)
                      +++||+|||+.+      +..|+|||||+.|||+..++++.|+|||++..+.............||.+|+|||++.+.- 
T Consensus       316 marGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgain  395 (534)
T KOG3653|consen  316 MARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAIN  395 (534)
T ss_pred             HHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcc
Confidence            578999999543      5579999999999999999999999999998877554444444467999999999976643 


Q ss_pred             C-----CCccchhhHhHHHHHHHhCCCCCCCCCCCchh---HHHHHHHhhcc----cchhhhhccCCCCCch--HHHHHH
Q 047677           75 V-----DEKSDVYSFGVVLMELVTGKKPIEPEYGENKD---IVRWVCSHFNS----KQSVLTLVDSSIPETF--KENAVE  140 (200)
Q Consensus        75 ~-----~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~  140 (200)
                      +     -.+.|+||+|.++||+++....++. ......   +..-+..+...    .....+..++.++...  ......
T Consensus       396 l~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~  474 (534)
T KOG3653|consen  396 LQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAV  474 (534)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHH
Confidence            2     1358999999999999986543321 000000   00000000000    0111122334444432  234456


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHhhCCCCcc
Q 047677          141 ILRIAVLCTTTQPALRPTMRSVVQMLEEAEPCNLV  175 (200)
Q Consensus       141 ~~~li~~cl~~dp~~Rpt~~~il~~L~~~~~~~~~  175 (200)
                      +.+.+..||..|++.|.|+..+-+++..+......
T Consensus       475 l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  475 LCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             HHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            78899999999999999999999999988877653


No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87  E-value=1.6e-22  Score=144.68  Aligned_cols=162  Identities=20%  Similarity=0.299  Sum_probs=108.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC--cceeeeecccccccccccccCC-CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG--KDTTHVIAGTTGYIAPEYGYTS-KVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~~pE~~~~~-~~~~   77 (200)
                      ++..||.|+|   ++.|+|||+|+.|++|+.+|.++|+|||+++.+.....  .+...-..-|..|++||.+.+. .+..
T Consensus       132 ~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~  208 (376)
T KOG0669|consen  132 GLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGP  208 (376)
T ss_pred             HHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCC
Confidence            3678999999   88999999999999999999999999999966543321  1111122347899999988775 5889


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhH-HHHHHHhhc-------ccchhhhhc-cCCCCCch----------HHHH
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDI-VRWVCSHFN-------SKQSVLTLV-DSSIPETF----------KENA  138 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~-~~~~~~~~----------~~~~  138 (200)
                      +.|+|+.||++.+|+++.+.++...+...-. ....+....       ....+...+ ...+++..          .-..
T Consensus       209 ~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd  288 (376)
T KOG0669|consen  209 PIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKD  288 (376)
T ss_pred             cchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCC
Confidence            9999999999999999999887544332111 111110000       000111111 01111110          1112


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          139 VEILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       139 ~~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+.++++.+++..||.+|+++.+++..
T Consensus       289 ~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  289 DEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             hhHHHHHHHHhccCcccCcchHhhhch
Confidence            256778889999999999999998764


No 385
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.87  E-value=1.5e-22  Score=164.37  Aligned_cols=162  Identities=26%  Similarity=0.383  Sum_probs=124.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||++|+.|||   .+++|||||-..|||+.....+|+.|||+++........-......-.+.|++-|.+....+..++|
T Consensus       806 QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSD  882 (1177)
T KOG1025|consen  806 QIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSD  882 (1177)
T ss_pred             HHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhh
Confidence            7999999999   8999999999999999999999999999998776543222221111245799999999999999999


Q ss_pred             hhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +||||+++||++| |..|++....++  +           ..+.+  .+.....+.--..+++-++.+||..|+..||++
T Consensus       883 VWsfGVtiWElmTFGa~Py~gi~~~e--I-----------~dlle--~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~f  947 (1177)
T KOG1025|consen  883 VWSFGVTIWELMTFGAKPYDGIPAEE--I-----------PDLLE--KGERLSQPPICTIDVYMVMVKCWMIDADSRPTF  947 (1177)
T ss_pred             hhhhhhhHHHHHhcCCCccCCCCHHH--h-----------hHHHh--ccccCCCCCCccHHHHHHHHHHhccCcccCccH
Confidence            9999999999998 899987543221  0           00111  111112233334477889999999999999999


Q ss_pred             HHHHHHHHhhCCCCccceeec
Q 047677          160 RSVVQMLEEAEPCNLVGIVIS  180 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~~~~~~  180 (200)
                      +++...+..+..-...-+++.
T Consensus       948 kel~~~fs~~ardpqryl~i~  968 (1177)
T KOG1025|consen  948 KELAEEFSRMARDPQRYLVIQ  968 (1177)
T ss_pred             HHHHHHHHHHhcCcceEeeeh
Confidence            999999999988888777766


No 386
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.86  E-value=2.5e-22  Score=158.35  Aligned_cols=140  Identities=27%  Similarity=0.433  Sum_probs=108.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCC-CCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV-DEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~-~~~~   79 (200)
                      |++.|++|||   +++|+|||||++|++++.+.++|++|||++.++....   ......|++.|+|||++.+..+ .+.+
T Consensus       163 q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~  236 (596)
T KOG0586|consen  163 QIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEV  236 (596)
T ss_pred             HHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecccc---cccccCCCCCccChHhhcCcccCCcce
Confidence            6789999999   8999999999999999999999999999998876432   2233558999999999998886 4789


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC--CCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS--SIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      |+|++|+++|-++.|..||+...-.               ......+..  +++.....   ++.+++.+++..+|.+|+
T Consensus       237 D~Wslgvvly~LV~GsLPFDG~~lk---------------~Lr~rvl~gk~rIp~~ms~---dce~lLrk~lvl~Pskr~  298 (596)
T KOG0586|consen  237 DIWSLGVVLYALVEGSLPFDGQNLK---------------ELRPRVLRGKYRIPFYMSC---DCEDLLRKFLVLNPSKRG  298 (596)
T ss_pred             ehhhhhhhheeeeecccccCCcccc---------------cccchheeeeecccceeec---hhHHHHHHhhccCccccC
Confidence            9999999999999999999743211               111111111  22222222   556677799999999999


Q ss_pred             CHHHHHH
Q 047677          158 TMRSVVQ  164 (200)
Q Consensus       158 t~~~il~  164 (200)
                      +.+++.+
T Consensus       299 ~~dqim~  305 (596)
T KOG0586|consen  299 PCDQIMK  305 (596)
T ss_pred             CHHHhhh
Confidence            9999865


No 387
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.86  E-value=1.1e-21  Score=134.17  Aligned_cols=159  Identities=22%  Similarity=0.295  Sum_probs=109.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~   79 (200)
                      |+++||.|+|   ++++.|||+||+|.+|..+|.+|+.|||+++.++-+-  .+.....-|..|.+|.++.+.+ |+.+.
T Consensus       109 qllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsi  183 (292)
T KOG0662|consen  109 QLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_pred             HHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccch
Confidence            6789999999   8999999999999999999999999999998776432  2222233578899999998876 78889


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhc--------cCCCCCc--hHHHH----HHHHHHH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLV--------DSSIPET--FKENA----VEILRIA  145 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~----~~~~~li  145 (200)
                      |+||.||++.|+.....|......-+..+...++............+        -+.+|..  .....    ..-.+++
T Consensus       184 dmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdll  263 (292)
T KOG0662|consen  184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLL  263 (292)
T ss_pred             HhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHH
Confidence            99999999999998444444333334444444332211111111111        1122221  22222    2346788


Q ss_pred             HHhcCCCCCCCCCHHHHHH
Q 047677          146 VLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       146 ~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++.+.-+|..|++++.+++
T Consensus       264 qkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  264 QKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHhccCcccccCHHHHhc
Confidence            8999999999999998765


No 388
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.85  E-value=1.4e-21  Score=156.37  Aligned_cols=177  Identities=23%  Similarity=0.329  Sum_probs=123.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC--CCC--eeecccccceeeccCCCcceeeeeccccccccccccc-CCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE--FLK--PRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-TSKV   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~--~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-~~~~   75 (200)
                      +++.||.|||   ++||+||||||.||++-.  +|+  -||+|||.++....+.   .-....||..|++||... +..|
T Consensus       128 d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y  201 (732)
T KOG4250|consen  128 DLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKY  201 (732)
T ss_pred             HHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCc
Confidence            4678999999   899999999999999843  233  5899999998876543   333467999999999988 5788


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCch-hHHHHHHHhhcccchhh---hhcc------CCCCCc---hHHHHHHHH
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENK-DIVRWVCSHFNSKQSVL---TLVD------SSIPET---FKENAVEIL  142 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~------~~~~~~---~~~~~~~~~  142 (200)
                      +..+|.|||||++|+++||..||.+...... .-..|............   ...+      ..+|..   .......+-
T Consensus       202 ~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~  281 (732)
T KOG4250|consen  202 TATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLT  281 (732)
T ss_pred             CceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhh
Confidence            9999999999999999999999987655421 11222111111111100   1111      122221   344455667


Q ss_pred             HHHHHhcCCCCCCCC--CHHHHHHHHHhhCCCCccceeeccCc
Q 047677          143 RIAVLCTTTQPALRP--TMRSVVQMLEEAEPCNLVGIVISKDG  183 (200)
Q Consensus       143 ~li~~cl~~dp~~Rp--t~~~il~~L~~~~~~~~~~~~~~~~~  183 (200)
                      +.+..+|..+|.+|-  ...+....++++-......+-...++
T Consensus       282 kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhiFs~~~~  324 (732)
T KOG4250|consen  282 KWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHIFSMVQA  324 (732)
T ss_pred             HHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEEEeeccc
Confidence            788899999999998  78888888888777766665444333


No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.85  E-value=1.8e-21  Score=137.53  Aligned_cols=158  Identities=20%  Similarity=0.285  Sum_probs=109.5

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-CCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-VDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~   78 (200)
                      ++++||.|+|   ++||.|||+||.|++|+. ...++|+|+|++.+.-.....+..   ..+..|--||.+...+ +..+
T Consensus       140 elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVR---VASRyfKGPELLVdy~~YDYS  213 (338)
T KOG0668|consen  140 ELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKGPELLVDYQMYDYS  213 (338)
T ss_pred             HHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeee---eehhhcCCchheeechhcccc
Confidence            4789999999   999999999999999986 466899999999887655444433   3466778899876654 7889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHh-------------hcccchhhhhccCCC---------CCchHH
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSH-------------FNSKQSVLTLVDSSI---------PETFKE  136 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~---------~~~~~~  136 (200)
                      .|+|||||++..|+..+-||........++.....-.             .........++....         ++...-
T Consensus       214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl  293 (338)
T KOG0668|consen  214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL  293 (338)
T ss_pred             HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence            9999999999999999988876554444433322100             001111111111100         111222


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          137 NAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       137 ~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ..++.++++.+.|..|..+|+|+.|+.+
T Consensus       294 ~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CChHHHHHHHHHHhhccccccchHHHhc
Confidence            2356778888999999999999999864


No 390
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.85  E-value=3.5e-22  Score=155.27  Aligned_cols=157  Identities=22%  Similarity=0.229  Sum_probs=113.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~   79 (200)
                      |+.-||..|.   ..|++|.||||.|||+... ..+||||||.+.+...+...+    .+-+..|.|||++.+..|....
T Consensus       544 QLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP----YLVSRFYRaPEIiLG~~yd~~i  616 (752)
T KOG0670|consen  544 QLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITP----YLVSRFYRAPEIILGLPYDYPI  616 (752)
T ss_pred             HHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccccccccccccH----HHHHHhccCcceeecCcccCCc
Confidence            5667888888   7899999999999999764 567999999997766543221    1125579999999999999999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHH----------------HHhhc--------------------------
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWV----------------CSHFN--------------------------  117 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~----------------~~~~~--------------------------  117 (200)
                      |+||.||++||++||+..|....+.........                ..+++                          
T Consensus       617 D~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vk  696 (752)
T KOG0670|consen  617 DTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVK  696 (752)
T ss_pred             cceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccC
Confidence            999999999999999999976554432211110                00000                          


Q ss_pred             ccchhh--hhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          118 SKQSVL--TLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       118 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ....+.  -+..+.++.........|.+|+.+||..||++|.|+.++|.
T Consensus       697 Ptkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  697 PTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             cchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            000000  11123455556666778899999999999999999999875


No 391
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.85  E-value=4.7e-23  Score=160.61  Aligned_cols=142  Identities=24%  Similarity=0.385  Sum_probs=112.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC---CCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF---LKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDE   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~   77 (200)
                      ||+.||.|||   -+||+|.||||+||++...   -++||+|||+++..+.   ........||+.|+|||++...+|..
T Consensus       672 QIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE---ksFRrsVVGTPAYLaPEVLrnkGyNr  745 (888)
T KOG4236|consen  672 QILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE---KSFRRSVVGTPAYLAPEVLRNKGYNR  745 (888)
T ss_pred             HHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch---hhhhhhhcCCccccCHHHHhhccccc
Confidence            6889999999   7999999999999999754   4579999999988764   33444567999999999999999999


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      +.|+||.|+++|.-++|..||...++-+.    .           .....--+|.. +.+.....+++|...|+..=.+|
T Consensus       746 SLDMWSVGVIiYVsLSGTFPFNEdEdInd----Q-----------IQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kR  810 (888)
T KOG4236|consen  746 SLDMWSVGVIIYVSLSGTFPFNEDEDIND----Q-----------IQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKR  810 (888)
T ss_pred             cccceeeeEEEEEEecccccCCCccchhH----H-----------hhccccccCCCchhhcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999974332111    1           11111233333 67777788999999999999999


Q ss_pred             CCHHHHH
Q 047677          157 PTMRSVV  163 (200)
Q Consensus       157 pt~~~il  163 (200)
                      .|+...+
T Consensus       811 ysvdk~l  817 (888)
T KOG4236|consen  811 YSVDKSL  817 (888)
T ss_pred             cchHhhc
Confidence            9887654


No 392
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.85  E-value=1e-21  Score=144.72  Aligned_cols=160  Identities=21%  Similarity=0.351  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC---CeeecccccceeeccCC-----Ccceeeeeccccccccccccc-
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL---KPRIADFGLARIVQSNG-----GKDTTHVIAGTTGYIAPEYGY-   71 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~---~~~l~df~~~~~~~~~~-----~~~~~~~~~~~~~~~~pE~~~-   71 (200)
                      +|+.||.|||   .+||.|||+||+||+.....   -+|++||.+..-...+.     ..+......|+-.|+|||++. 
T Consensus       184 dia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~  260 (463)
T KOG0607|consen  184 DIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV  260 (463)
T ss_pred             HHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh
Confidence            4789999999   89999999999999996543   36999998764322211     112222345788999999742 


Q ss_pred             ----CCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhc-cCCC--CC-chHHHHHHHHH
Q 047677           72 ----TSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLV-DSSI--PE-TFKENAVEILR  143 (200)
Q Consensus        72 ----~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~~~  143 (200)
                          ..-|..+.|.||||+++|-|++|.+||...-+.+-.+.+-.... .-+..+.+.+ .+.+  |. .+...+.+..+
T Consensus       261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr-~CQ~~LFesIQEGkYeFPdkdWahIS~eakd  339 (463)
T KOG0607|consen  261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR-VCQNKLFESIQEGKYEFPDKDWAHISSEAKD  339 (463)
T ss_pred             hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH-HHHHHHHHHHhccCCcCChhhhHHhhHHHHH
Confidence                22478899999999999999999999987544332211100000 0001111111 1222  22 25555666778


Q ss_pred             HHHHhcCCCCCCCCCHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ++..++..|+..|.++.+++.
T Consensus       340 lisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  340 LISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHhccHHhhhhhhhccC
Confidence            888999999999999988776


No 393
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.84  E-value=1.9e-21  Score=162.19  Aligned_cols=141  Identities=24%  Similarity=0.402  Sum_probs=99.6

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC-----CCCCC
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT-----SKVDE   77 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-----~~~~~   77 (200)
                      +-||.-||   +.|+|||||||.|||++..|.++|+|||.|-.+...+.-.. ...+|||-|++||++..     +.|+.
T Consensus       185 VlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s-~~aVGTPDYISPEvLqs~~~~~g~yG~  260 (1317)
T KOG0612|consen  185 VLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS-SVAVGTPDYISPEVLQSQGDGKGEYGR  260 (1317)
T ss_pred             HHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe-ccccCCCCccCHHHHHhhcCCccccCC
Confidence            34555566   99999999999999999999999999999987765443222 23569999999998642     45788


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC----CCCCchHHHHHHHHHHHHHhcCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS----SIPETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ..|.||+|+++|||+.|.-||+...               ...++.++++.    .+|. ..+.+....+||.+.+ .+|
T Consensus       261 ecDwWSlGV~~YEMlyG~TPFYads---------------lveTY~KIm~hk~~l~FP~-~~~VSeeakdLI~~ll-~~~  323 (1317)
T KOG0612|consen  261 ECDWWSLGVFMYEMLYGETPFYADS---------------LVETYGKIMNHKESLSFPD-ETDVSEEAKDLIEALL-CDR  323 (1317)
T ss_pred             ccchhhhHHHHHHHHcCCCcchHHH---------------HHHHHHHHhchhhhcCCCc-ccccCHHHHHHHHHHh-cCh
Confidence            9999999999999999999997421               11122222222    2331 1224445566665554 578


Q ss_pred             CCCCC---HHHHHH
Q 047677          154 ALRPT---MRSVVQ  164 (200)
Q Consensus       154 ~~Rpt---~~~il~  164 (200)
                      +.|..   ++++-.
T Consensus       324 e~RLgrngiedik~  337 (1317)
T KOG0612|consen  324 EVRLGRNGIEDIKN  337 (1317)
T ss_pred             hhhcccccHHHHHh
Confidence            88887   766643


No 394
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83  E-value=3.1e-21  Score=157.87  Aligned_cols=155  Identities=23%  Similarity=0.301  Sum_probs=118.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCc--ceeeeecccccccccccccCCCCCC-
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGK--DTTHVIAGTTGYIAPEYGYTSKVDE-   77 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~-   77 (200)
                      |++.|++|||   ++|+.|||+|++|+++..+|.+|++|||.+..+......  .......|...|+|||.+.+..|.. 
T Consensus       428 qL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  428 QLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPR  504 (601)
T ss_pred             HHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcc
Confidence            6889999999   899999999999999999999999999998777655443  3344466899999999999999865 


Q ss_pred             ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 047677           78 KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRP  157 (200)
Q Consensus        78 ~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  157 (200)
                      ..|+||.|++++.|++|+.||......+..+.       ...........................++.+||+.||.+|.
T Consensus       505 ~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~  577 (601)
T KOG0590|consen  505 AVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-------TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRI  577 (601)
T ss_pred             hhhhhhccceEEEEecCCCccccccccccchh-------hhccccccccccChHHHHHhchhhHHHHHHHHccCChhhee
Confidence            57999999999999999999986554443320       01111111111222222455555677899999999999999


Q ss_pred             CHHHHHHH
Q 047677          158 TMRSVVQM  165 (200)
Q Consensus       158 t~~~il~~  165 (200)
                      |+++|++.
T Consensus       578 ti~~i~~d  585 (601)
T KOG0590|consen  578 TIEQILND  585 (601)
T ss_pred             cHHHHhhC
Confidence            99999763


No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.83  E-value=2e-20  Score=150.23  Aligned_cols=156  Identities=20%  Similarity=0.178  Sum_probs=98.7

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK------   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~------   74 (200)
                      |+++||.|||   +++++||||||.||+++.++.++|+|||++......... .......++.|++||.+....      
T Consensus       317 ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~l~~~~~~~~~~  392 (507)
T PLN03224        317 QVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEELVMPQSCPRAP  392 (507)
T ss_pred             HHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChhhhcCCCCCCccc
Confidence            5788999999   789999999999999999999999999998654332111 111122468899999865322      


Q ss_pred             ----------------CCCccchhhHhHHHHHHHhCCC-CCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCC-chHH
Q 047677           75 ----------------VDEKSDVYSFGVVLMELVTGKK-PIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPE-TFKE  136 (200)
Q Consensus        75 ----------------~~~~~Di~slG~~~~~l~~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  136 (200)
                                      ...+.|+||+||++++|+++.. ||.....-......+.    .............+.. ....
T Consensus       393 ~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~----~~~~~~r~~~~~~~~~~~~d~  468 (507)
T PLN03224        393 APAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD----NDLNRWRMYKGQKYDFSLLDR  468 (507)
T ss_pred             hhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc----chHHHHHhhcccCCCcccccc
Confidence                            1134699999999999999864 6643221111111100    0000000000011110 1222


Q ss_pred             HHHHHHHHHHHhcCCCC---CCCCCHHHHHH
Q 047677          137 NAVEILRIAVLCTTTQP---ALRPTMRSVVQ  164 (200)
Q Consensus       137 ~~~~~~~li~~cl~~dp---~~Rpt~~~il~  164 (200)
                      ......+++.+||..+|   .+|+|++++++
T Consensus       469 ~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        469 NKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             cChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            34567778889998766   68999999975


No 396
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.82  E-value=1.2e-20  Score=157.65  Aligned_cols=93  Identities=25%  Similarity=0.383  Sum_probs=66.0

Q ss_pred             ccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHH
Q 047677           60 GTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAV  139 (200)
Q Consensus        60 ~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (200)
                      ||..|++||++.+..++.++|||||||++|++++|..||......  .....+   ....        ...+........
T Consensus       542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~--~~~~~i---l~~~--------~~~p~~~~~~~~  608 (669)
T cd05610         542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ--QVFQNI---LNRD--------IPWPEGEEKLSV  608 (669)
T ss_pred             eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH---HhcC--------CCCCcccccCCH
Confidence            578899999998888999999999999999999999999643211  111111   0000        011111112334


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHH
Q 047677          140 EILRIAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       140 ~~~~li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      .+.+++..||..||.+|||+.++++.
T Consensus       609 ~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         609 NAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHHHHcccChhHCcCHHHHHhC
Confidence            57778889999999999999999875


No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81  E-value=2.2e-20  Score=148.50  Aligned_cols=97  Identities=32%  Similarity=0.489  Sum_probs=80.4

Q ss_pred             hhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCC--------C------------------------
Q 047677            4 KGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNG--------G------------------------   51 (200)
Q Consensus         4 ~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~--------~------------------------   51 (200)
                      -|+++.|   .+|+|||||||.||||+.+|.+||.|||+|+-+....        .                        
T Consensus       740 cAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~  816 (1034)
T KOG0608|consen  740 CAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLE  816 (1034)
T ss_pred             HHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHH
Confidence            3778888   8999999999999999999999999999985442110        0                        


Q ss_pred             --------cceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCC
Q 047677           52 --------KDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYG  103 (200)
Q Consensus        52 --------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~  103 (200)
                              +......+||..|++||++...++....|.|+.|+++|+|+.|+.||.....
T Consensus       817 ~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  817 RRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             HHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence                    0112345699999999999999999999999999999999999999975443


No 398
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.81  E-value=2e-20  Score=143.57  Aligned_cols=152  Identities=28%  Similarity=0.445  Sum_probs=106.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC---CCCeeecccccceeeccCCCcc-----eeeeecccccccccccccC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE---FLKPRIADFGLARIVQSNGGKD-----TTHVIAGTTGYIAPEYGYT   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~---~~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~   72 (200)
                      ||+.||.||.+. +-.|+|.||||.||++..   .|.+|+.|||++..+.......     ......||+.|+|||.+.-
T Consensus       576 QiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvV  654 (775)
T KOG1151|consen  576 QIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVV  654 (775)
T ss_pred             HHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeec
Confidence            688999999976 568999999999999943   5889999999998876543322     2234469999999998764


Q ss_pred             C----CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHh
Q 047677           73 S----KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLC  148 (200)
Q Consensus        73 ~----~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  148 (200)
                      +    +.+.++|+||+|+++|.++.|+.||....... ++..        ..+...-..-.+|.. .....+...+|.+|
T Consensus       655 gkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILq--------eNTIlkAtEVqFP~K-PvVsseAkaFIRRC  724 (775)
T KOG1151|consen  655 GKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQ--------ENTILKATEVQFPPK-PVVSSEAKAFIRRC  724 (775)
T ss_pred             CCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHh--------hhchhcceeccCCCC-CccCHHHHHHHHHH
Confidence            4    46889999999999999999999996432221 1111        111111111122221 11223456678899


Q ss_pred             cCCCCCCCCCHHHHH
Q 047677          149 TTTQPALRPTMRSVV  163 (200)
Q Consensus       149 l~~dp~~Rpt~~~il  163 (200)
                      |++.-++|..+.++.
T Consensus       725 LaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  725 LAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHhhhhhhhhHHHHc
Confidence            999999999887763


No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81  E-value=1.2e-20  Score=136.30  Aligned_cols=147  Identities=25%  Similarity=0.424  Sum_probs=106.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEe--CCCCCeeecccccceeeccCCCcceeeeecccccccccccccCC-----
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILL--DEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-----   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~--~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-----   73 (200)
                      |+++||.|+|   ++++||||||.+||+|  .+...+||+|||..+..+..-     ...--+-.|.+||.....     
T Consensus       129 ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~  200 (378)
T KOG1345|consen  129 QLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKL  200 (378)
T ss_pred             HHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCcee-----hhhhhhcccCCcHHHhhccccce
Confidence            6889999999   8999999999999999  334579999999986544221     111124457788754322     


Q ss_pred             CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCC
Q 047677           74 KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ...+.+|+|.||++++.+++|..||+.-...+..+.+|..+..        ...+..|..+....+.++++..+-+..++
T Consensus       201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~--------rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~  272 (378)
T KOG1345|consen  201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK--------RKNPALPKKFNPFSEKALRLFKKSLTPRF  272 (378)
T ss_pred             EecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc--------ccCccCchhhcccCHHHHHHHHHhcCCcc
Confidence            2357799999999999999999999866556666666654322        22345566666666778888889999999


Q ss_pred             CCCCCHHHHH
Q 047677          154 ALRPTMRSVV  163 (200)
Q Consensus       154 ~~Rpt~~~il  163 (200)
                      ++|=-+.++-
T Consensus       273 ~drcki~~~k  282 (378)
T KOG1345|consen  273 KDRCKIWTAK  282 (378)
T ss_pred             cccchhHHHH
Confidence            9994444433


No 400
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.81  E-value=4.3e-20  Score=150.80  Aligned_cols=143  Identities=27%  Similarity=0.445  Sum_probs=109.4

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC-----CC
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK-----VD   76 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-----~~   76 (200)
                      ++.|+.+||   .+-++|||||-.||++..++.+||+|||.+..+...-...+  ..+||+.|+|||++....     |.
T Consensus       132 ~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRn--T~iGtP~WMAPEViac~e~~d~tyd  206 (953)
T KOG0587|consen  132 ILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRN--TFIGTPYWMAPEVIACDESPDATYD  206 (953)
T ss_pred             HHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeeccccccc--CcCCCcccccceeeecccCCCCCcc
Confidence            467888888   77799999999999999999999999999877654332222  345999999999986543     67


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCC---chHHHHHHHHHHHHHhcCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPE---TFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ..+|+||||++..|+..|.+|+.....                ....-.+...-|+   .+...+.++.++|..||..|.
T Consensus       207 ~R~D~WsLGITaIEladG~PPl~DmHP----------------mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~  270 (953)
T KOG0587|consen  207 YRSDLWSLGITAIEMAEGAPPLCDMHP----------------MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDY  270 (953)
T ss_pred             cccchhhccceeehhcCCCCCccCcch----------------hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhcc
Confidence            789999999999999999999864321                1111111122222   256667789999999999999


Q ss_pred             CCCCCHHHHHHH
Q 047677          154 ALRPTMRSVVQM  165 (200)
Q Consensus       154 ~~Rpt~~~il~~  165 (200)
                      .+||++.++++.
T Consensus       271 e~RP~~~~ll~h  282 (953)
T KOG0587|consen  271 EQRPSTEELLKH  282 (953)
T ss_pred             ccCcchhhhccC
Confidence            999999988753


No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81  E-value=1.2e-19  Score=140.06  Aligned_cols=105  Identities=25%  Similarity=0.307  Sum_probs=74.3

Q ss_pred             ccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCC----chhHHHHHHH------------------hhc
Q 047677           60 GTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGE----NKDIVRWVCS------------------HFN  117 (200)
Q Consensus        60 ~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~----~~~~~~~~~~------------------~~~  117 (200)
                      .|..|.+||++.+.+|+..+||||++|+++|++||...|.+....    +.+....+-+                  +..
T Consensus       413 QTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFn  492 (590)
T KOG1290|consen  413 QTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFN  492 (590)
T ss_pred             hhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhc
Confidence            456799999999999999999999999999999999999765433    4443333321                  112


Q ss_pred             ccchhhhhccCCCC----------CchHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 047677          118 SKQSVLTLVDSSIP----------ETFKENAVEILRIAVLCTTTQPALRPTMRSVVQ  164 (200)
Q Consensus       118 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~il~  164 (200)
                      ..+.+..+..-...          ....+.+.++.+|+.-||+.+|++|||+.++++
T Consensus       493 r~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  493 RRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             cccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            22222211111111          114567778999999999999999999999875


No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.79  E-value=2e-19  Score=129.21  Aligned_cols=113  Identities=39%  Similarity=0.640  Sum_probs=94.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCC-CCCeeecccccceeeccCCCcceeeeecccccccccccccCC-CCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDE-FLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS-KVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~   78 (200)
                      |+++++++||   +.|++|+||+|.||+++. .+.++++||+.+........  ......+...|.+||..... ..+.+
T Consensus       100 ~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~  174 (215)
T cd00180         100 QILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEK  174 (215)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCch
Confidence            4788999999   789999999999999999 89999999999876644321  11123367789999988776 77889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      .|+|++|++++++                                               ..+.+++.+|+..+|.+||+
T Consensus       175 ~D~~~lg~~~~~l-----------------------------------------------~~~~~~l~~~l~~~p~~R~~  207 (215)
T cd00180         175 SDIWSLGVILYEL-----------------------------------------------PELKDLIRKMLQKDPEKRPS  207 (215)
T ss_pred             hhhHHHHHHHHHH-----------------------------------------------HHHHHHHHHHhhCCcccCcC
Confidence            9999999999998                                               47788999999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      +.++++.
T Consensus       208 ~~~l~~~  214 (215)
T cd00180         208 AKEILEH  214 (215)
T ss_pred             HHHHhhC
Confidence            9998864


No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.77  E-value=4e-19  Score=134.83  Aligned_cols=161  Identities=23%  Similarity=0.313  Sum_probs=105.5

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccC-------C------Cc---------------
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSN-------G------GK---------------   52 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~-------~------~~---------------   52 (200)
                      +..||+++|   ++|||||||||.|++.+.. +.-.|+|||++......       .      ..               
T Consensus       141 ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~  217 (418)
T KOG1167|consen  141 LLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATAS  217 (418)
T ss_pred             HHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccccc
Confidence            467999999   8999999999999999764 55678999998621100       0      00               


Q ss_pred             -----ce---------eeeecccccccccccccCC-CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhc
Q 047677           53 -----DT---------THVIAGTTGYIAPEYGYTS-KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFN  117 (200)
Q Consensus        53 -----~~---------~~~~~~~~~~~~pE~~~~~-~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  117 (200)
                           ..         .-...||++|.|||++... ..+++.|+||.|+++..++++..||....++-..+...+.....
T Consensus       218 ~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~  297 (418)
T KOG1167|consen  218 KPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGS  297 (418)
T ss_pred             CCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhCh
Confidence                 00         0012489999999987654 46789999999999999999999997665554443333211100


Q ss_pred             --------ccch--hhh----------------h----ccC-C----CCCchHHHH-HHHHHHHHHhcCCCCCCCCCHHH
Q 047677          118 --------SKQS--VLT----------------L----VDS-S----IPETFKENA-VEILRIAVLCTTTQPALRPTMRS  161 (200)
Q Consensus       118 --------~~~~--~~~----------------~----~~~-~----~~~~~~~~~-~~~~~li~~cl~~dp~~Rpt~~~  161 (200)
                              ..+.  +..                .    +.. .    .+....+.. ..+++++.+|+..||.+|.|+++
T Consensus       298 ~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEe  377 (418)
T KOG1167|consen  298 AEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAED  377 (418)
T ss_pred             HHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHH
Confidence                    0000  000                0    000 0    001112222 25788999999999999999999


Q ss_pred             HHHH
Q 047677          162 VVQM  165 (200)
Q Consensus       162 il~~  165 (200)
                      +|..
T Consensus       378 ALkH  381 (418)
T KOG1167|consen  378 ALKH  381 (418)
T ss_pred             HhcC
Confidence            9864


No 404
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71  E-value=1.6e-17  Score=139.14  Aligned_cols=147  Identities=22%  Similarity=0.263  Sum_probs=98.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc--eeee---ecccccccccccccCCC-
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD--TTHV---IAGTTGYIAPEYGYTSK-   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~---~~~~~~~~~pE~~~~~~-   74 (200)
                      |++.||.-+|   ..||+|||||.+|||+..=.++.|.||...+...-+.+-+  ....   .....+|+|||.+.... 
T Consensus       128 QLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~  204 (1431)
T KOG1240|consen  128 QLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALG  204 (1431)
T ss_pred             HHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhcccc
Confidence            6788999999   8999999999999999998999999998764432221111  1111   12345899999875421 


Q ss_pred             ----------CCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHH
Q 047677           75 ----------VDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILR  143 (200)
Q Consensus        75 ----------~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (200)
                                ..++=||||+||++.|+++ |+++|...        +...............+.. ++      ...++.
T Consensus       205 ~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--------QL~aYr~~~~~~~e~~Le~-Ie------d~~~Rn  269 (1431)
T KOG1240|consen  205 KTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--------QLLAYRSGNADDPEQLLEK-IE------DVSLRN  269 (1431)
T ss_pred             ccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--------HHHhHhccCccCHHHHHHh-Cc------CccHHH
Confidence                      3456799999999999998 78888521        1111000101111111110 00      015677


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHH
Q 047677          144 IAVLCTTTQPALRPTMRSVVQM  165 (200)
Q Consensus       144 li~~cl~~dp~~Rpt~~~il~~  165 (200)
                      ++..|++.||.+|.++++.++.
T Consensus       270 lil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  270 LILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHccCchhccCHHHHHHh
Confidence            9999999999999999999887


No 405
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.71  E-value=2.4e-18  Score=128.20  Aligned_cols=128  Identities=17%  Similarity=0.175  Sum_probs=83.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccC--------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYT--------   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~--------   72 (200)
                      |+++.+++||   +.|++|+||+|+|++++.+|.+.|+||+.....+.....     ...+..|.|||....        
T Consensus       153 Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~  224 (288)
T PF14531_consen  153 QMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNN  224 (288)
T ss_dssp             HHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSE
T ss_pred             HHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCccc
Confidence            5678999999   899999999999999999999999999887655431111     123467889986533        


Q ss_pred             CCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCC
Q 047677           73 SKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        73 ~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  152 (200)
                      ..++.+.|.|+||+++|.|+++..||........             ...      .+..+. +..+.+..+|..+|+.|
T Consensus       225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~-------------~~~------~f~~C~-~~Pe~v~~LI~~lL~~~  284 (288)
T PF14531_consen  225 APYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD-------------PEW------DFSRCR-DMPEPVQFLIRGLLQRN  284 (288)
T ss_dssp             EEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST-------------SGG------GGTTSS----HHHHHHHHHHT-SS
T ss_pred             ceeeeccCHHHHHHHHHHHHHccCCCCCCCcccc-------------ccc------cchhcC-CcCHHHHHHHHHHccCC
Confidence            2357788999999999999999999975432110             000      111122 44557778999999999


Q ss_pred             CCCC
Q 047677          153 PALR  156 (200)
Q Consensus       153 p~~R  156 (200)
                      |.+|
T Consensus       285 ~~~R  288 (288)
T PF14531_consen  285 PEDR  288 (288)
T ss_dssp             GGGS
T ss_pred             cccC
Confidence            9988


No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.71  E-value=2.4e-18  Score=135.51  Aligned_cols=93  Identities=29%  Similarity=0.500  Sum_probs=80.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCC-CCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV-DEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~-~~~~   79 (200)
                      ||+.|++.||   +.||||||||-+|+.++.+|-++|+|||.+....+.    .-...+||..|+|||++.+..| ....
T Consensus       678 QV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~q  750 (772)
T KOG1152|consen  678 QVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQ  750 (772)
T ss_pred             HHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcc
Confidence            7889999999   899999999999999999999999999998665432    1223569999999999999887 4668


Q ss_pred             chhhHhHHHHHHHhCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEP  100 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~  100 (200)
                      |||++|+++|.++....||+.
T Consensus       751 diwalgillytivykenpyyn  771 (772)
T KOG1152|consen  751 DIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhhhhhheeeEEEeccCCCcC
Confidence            999999999999998888863


No 407
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.69  E-value=6.5e-17  Score=127.82  Aligned_cols=166  Identities=24%  Similarity=0.337  Sum_probs=113.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCC------
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSK------   74 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~------   74 (200)
                      ++++||+|||+  +...+|+.+++.|++++....+|+.|||+....................-|.+||.+....      
T Consensus        56 di~~Gl~ylh~--s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~  133 (484)
T KOG1023|consen   56 DISKGLAYLHN--SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLES  133 (484)
T ss_pred             HHHHHHHHHhc--CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccc
Confidence            57899999996  4444999999999999999999999999976654311111111122355789999876642      


Q ss_pred             -CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCC
Q 047677           75 -VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        75 -~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                       .+.+.|+||+|++++|+++...||......... .+.+.....   .......+...... +..+.+..++..||..+|
T Consensus       134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~---~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P  208 (484)
T KOG1023|consen  134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK---GGSNPFRPSIELLN-ELPPELLLLVARCWEEIP  208 (484)
T ss_pred             cccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHh---cCCCCcCcchhhhh-hcchHHHHHHHHhcccCh
Confidence             356799999999999999999999864433322 222221111   01111111111111 333368889999999999


Q ss_pred             CCCCCHHHHHHHHHhhCCCC
Q 047677          154 ALRPTMRSVVQMLEEAEPCN  173 (200)
Q Consensus       154 ~~Rpt~~~il~~L~~~~~~~  173 (200)
                      .+||++..+-..++.+....
T Consensus       209 ~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  209 EKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             hhCccHHHHHhhhhhhcccc
Confidence            99999999999988877654


No 408
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.68  E-value=1.1e-16  Score=121.62  Aligned_cols=149  Identities=21%  Similarity=0.257  Sum_probs=100.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeC--CCC--CeeecccccceeeccCCCcce----eeeecccccccccccccC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLD--EFL--KPRIADFGLARIVQSNGGKDT----THVIAGTTGYIAPEYGYT   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~--~~~--~~~l~df~~~~~~~~~~~~~~----~~~~~~~~~~~~pE~~~~   72 (200)
                      |+++|+.|||   ++|+.|||+|+.||++.  +++  ++.|.|||.+-.....+-+..    .....|.-..++||+...
T Consensus       349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            6889999999   89999999999999994  333  356789998754333221111    112346677899998654


Q ss_pred             CC------CCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHH
Q 047677           73 SK------VDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAV  146 (200)
Q Consensus        73 ~~------~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  146 (200)
                      ..      ...++|.|+.|.+.||++....||+.....           ..+...+.+   ..+|..+....+.+.+++.
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-----------~L~~r~Yqe---~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-----------LLDTRTYQE---SQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-----------eechhhhhh---hhCCCCcccCChHHHHHHH
Confidence            32      235899999999999999999999863221           111111222   2333333344456778899


Q ss_pred             HhcCCCCCCCCCHHHHHHHH
Q 047677          147 LCTTTQPALRPTMRSVVQML  166 (200)
Q Consensus       147 ~cl~~dp~~Rpt~~~il~~L  166 (200)
                      ..|+.||.+|++..-+-..|
T Consensus       492 ~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHhcCCccccCCccHHHhHH
Confidence            99999999999986554443


No 409
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.67  E-value=3e-17  Score=128.19  Aligned_cols=135  Identities=28%  Similarity=0.432  Sum_probs=100.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCC----cceeeeecccccccccccccCCCCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGG----KDTTHVIAGTTGYIAPEYGYTSKVD   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~pE~~~~~~~~   76 (200)
                      |++.|+.|      +|.+|+|+||.||+...+..++++|||+........+    ........|+..|++||.+.+..|+
T Consensus       367 q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~  440 (516)
T KOG1033|consen  367 QIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYS  440 (516)
T ss_pred             hhccchhh------ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhh
Confidence            34555655      6799999999999999999999999999876654431    1223345689999999999999999


Q ss_pred             CccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      .++||||||++++|++. -...+.                  .......+.+..+|+......+.-+.|+++++...|.+
T Consensus       441 ~kvdIyaLGlil~EL~~~f~T~~e------------------r~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~  502 (516)
T KOG1033|consen  441 EKVDIYALGLILAELLIQFSTQFE------------------RIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEE  502 (516)
T ss_pred             hhcchhhHHHHHHHHHHHhccHHH------------------HHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCccc
Confidence            99999999999999987 222221                  11223334445566554444555667889999999999


Q ss_pred             CCCH
Q 047677          156 RPTM  159 (200)
Q Consensus       156 Rpt~  159 (200)
                      ||++
T Consensus       503 RP~~  506 (516)
T KOG1033|consen  503 RPSA  506 (516)
T ss_pred             CchH
Confidence            9944


No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.66  E-value=4.1e-16  Score=120.09  Aligned_cols=172  Identities=20%  Similarity=0.244  Sum_probs=117.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-----CCeeecccccce--eeccCCC------cceeeeeccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-----LKPRIADFGLAR--IVQSNGG------KDTTHVIAGTTGYIAP   67 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-----~~~~l~df~~~~--~~~~~~~------~~~~~~~~~~~~~~~p   67 (200)
                      |++.+|++||   +.|++||||||.|++++..     ..+.|.|||+++  .......      ........||..|+++
T Consensus       130 q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~  206 (322)
T KOG1164|consen  130 QNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI  206 (322)
T ss_pred             HHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccH
Confidence            5678999999   8999999999999999765     458899999998  3222111      1112234599999999


Q ss_pred             ccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHH
Q 047677           68 EYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVL  147 (200)
Q Consensus        68 E~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  147 (200)
                      ....+...+.+.|+||++.++.+++.|..||......... ........       ............   ..+.++...
T Consensus       207 ~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~  275 (322)
T KOG1164|consen  207 NVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK-SKFEKDPR-------KLLTDRFGDLKP---EEFAKILEY  275 (322)
T ss_pred             HHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-HHHHHHhh-------hhccccccCCCh---HHHHHHHHH
Confidence            9999999999999999999999999999999765433221 10000000       000000111112   234445555


Q ss_pred             hcCCCCCCCCCHHHHHHHHHhhCCCCccceeeccCcchh
Q 047677          148 CTTTQPALRPTMRSVVQMLEEAEPCNLVGIVISKDGATK  186 (200)
Q Consensus       148 cl~~dp~~Rpt~~~il~~L~~~~~~~~~~~~~~~~~~~~  186 (200)
                      +-..+...+|....+...|.............+.+|+..
T Consensus       276 ~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~  314 (322)
T KOG1164|consen  276 IDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVK  314 (322)
T ss_pred             hhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCccccc
Confidence            556899999999999999988877765555556665543


No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.65  E-value=2e-16  Score=115.16  Aligned_cols=96  Identities=38%  Similarity=0.562  Sum_probs=78.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccc-cCCCCCCcc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYG-YTSKVDEKS   79 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~-~~~~~~~~~   79 (200)
                      |++.++.+||   ++|++|+|++|.|++++..+.++|+|||.+......... ......++..|++||.. ....++.++
T Consensus       106 ~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~  181 (225)
T smart00221      106 QILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAV  181 (225)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchh
Confidence            4678999999   789999999999999999999999999998776543210 11123467789999988 556677899


Q ss_pred             chhhHhHHHHHHHhCCCCCCC
Q 047677           80 DVYSFGVVLMELVTGKKPIEP  100 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~  100 (200)
                      |+|+||++++++++|..||..
T Consensus       182 Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      182 DIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             hHHHHHHHHHHHHHCCCCccc
Confidence            999999999999999999964


No 412
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.64  E-value=1.9e-16  Score=126.67  Aligned_cols=155  Identities=23%  Similarity=0.334  Sum_probs=108.0

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccc---ccCCCCCCcc
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEY---GYTSKVDEKS   79 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~---~~~~~~~~~~   79 (200)
                      ++|++|||   ++|=+|||||-.||+++..|.+++.|||.+......  ......+.|++.|++||+   -..++|....
T Consensus       122 l~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat--i~KrksfiGtpywmapEvaaverkggynqlc  196 (829)
T KOG0576|consen  122 LQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLC  196 (829)
T ss_pred             hccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh--hhhhhcccCCccccchhHHHHHhcccccccc
Confidence            57999999   899999999999999999999999999987554422  112234669999999996   3456789999


Q ss_pred             chhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           80 DVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        80 Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |+|++|++..|+-..++|-......    ..... +-++      ...+..........+.|-+|+..++..+|++|||+
T Consensus       197 diwa~gitAiel~eLqpplfdlhpm----r~l~L-mTkS------~~qpp~lkDk~kws~~fh~fvK~altknpKkRpta  265 (829)
T KOG0576|consen  197 DIWALGITAIELGELQPPLFDLHPM----RALFL-MTKS------GFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTA  265 (829)
T ss_pred             cccccccchhhhhhcCCcccccchH----HHHHH-hhcc------CCCCCcccCCccchHHHHHHHHHHhcCCCccCCCh
Confidence            9999999999998877775432211    11111 0010      01111112222333455667779999999999998


Q ss_pred             HHH---------------HHHHHhhCCCC
Q 047677          160 RSV---------------VQMLEEAEPCN  173 (200)
Q Consensus       160 ~~i---------------l~~L~~~~~~~  173 (200)
                      +.+               +++|++....+
T Consensus       266 eklL~h~fvs~~l~~rl~~eLLdK~n~P~  294 (829)
T KOG0576|consen  266 EKLLQHPFVSQTLSRRLAIELLDKVNNPN  294 (829)
T ss_pred             hhheeceeeccchhhHHHHHHHHHccCCC
Confidence            765               45666666666


No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62  E-value=2.5e-16  Score=131.60  Aligned_cols=147  Identities=22%  Similarity=0.340  Sum_probs=105.2

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcc-------------eeeeecccccccccc
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKD-------------TTHVIAGTTGYIAPE   68 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~-------------~~~~~~~~~~~~~pE   68 (200)
                      .+.+++|||   +-||+|||+||.|.+|..-|.+|+.|||+.+.........             ...+..||+.|.|||
T Consensus       152 mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  152 MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            356899999   8999999999999999999999999999876543221110             123456999999999


Q ss_pred             cccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHh
Q 047677           69 YGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLC  148 (200)
Q Consensus        69 ~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  148 (200)
                      ++...+|...+|+|++|+++|+.+.|..||.....+. .+...    ....        -..++...+...+..+++.++
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~v----isd~--------i~wpE~dea~p~Ea~dli~~L  295 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQV----ISDD--------IEWPEEDEALPPEAQDLIEQL  295 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhhh----hhhh--------ccccccCcCCCHHHHHHHHHH
Confidence            9999999999999999999999999999997543221 01111    1111        112222222334566677789


Q ss_pred             cCCCCCCCCCHHHHHH
Q 047677          149 TTTQPALRPTMRSVVQ  164 (200)
Q Consensus       149 l~~dp~~Rpt~~~il~  164 (200)
                      |..+|..|.-....++
T Consensus       296 L~qnp~~Rlgt~ga~e  311 (1205)
T KOG0606|consen  296 LRQNPLCRLGTGGALE  311 (1205)
T ss_pred             HHhChHhhcccchhhh
Confidence            9999999975544433


No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.56  E-value=1.8e-14  Score=109.83  Aligned_cols=157  Identities=29%  Similarity=0.435  Sum_probs=107.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-CeeecccccceeeccCCCcc----eeeeecccccccccccccC---
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-KPRIADFGLARIVQSNGGKD----TTHVIAGTTGYIAPEYGYT---   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~---   72 (200)
                      |++.++.|+|   +.|++|||+||+|++++..+ .++++|||.+..........    ......++..|.+||...+   
T Consensus       109 ~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~  185 (384)
T COG0515         109 QILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSL  185 (384)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCC
Confidence            4677889999   89999999999999999988 69999999987554332221    2234568999999999887   


Q ss_pred             CCCCCccchhhHhHHHHHHHhCCCCCCCCCCC--chhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcC
Q 047677           73 SKVDEKSDVYSFGVVLMELVTGKKPIEPEYGE--NKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTT  150 (200)
Q Consensus        73 ~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  150 (200)
                      .......|+|++|++++++++|..||......  .......+......  ...........   ......+.+++..|+.
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~  260 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--SLASPLSPSNP---ELISKAASDLLKKLLA  260 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--ccccccCcccc---chhhHHHHHHHHHHHh
Confidence            56788999999999999999999997654431  11111111110000  00000000000   1222456678889999


Q ss_pred             CCCCCCCCHHHHHHH
Q 047677          151 TQPALRPTMRSVVQM  165 (200)
Q Consensus       151 ~dp~~Rpt~~~il~~  165 (200)
                      .+|..|.+.......
T Consensus       261 ~~~~~r~~~~~~~~~  275 (384)
T COG0515         261 KDPKNRLSSSSDLSH  275 (384)
T ss_pred             cCchhcCCHHHHhhc
Confidence            999999999887664


No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.52  E-value=4.7e-15  Score=118.17  Aligned_cols=126  Identities=29%  Similarity=0.288  Sum_probs=96.3

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccchh
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDVY   82 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~   82 (200)
                      +-+++.+|   +.|++|+|+|++||+++..|.+++.|||.++........      .|+..|++||++.  .....+|.|
T Consensus       107 aLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~------cgt~eymApEI~~--gh~~a~D~w  175 (612)
T KOG0603|consen  107 ALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWW  175 (612)
T ss_pred             HHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc------ccchhhhhhHhhh--ccCCcccch
Confidence            34667777   899999999999999999999999999998766543222      4799999999987  567889999


Q ss_pred             hHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           83 SFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        83 slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      |||++.+++++|..||..      +.              ...+-..-+..+.........++..++..+|..|.-.
T Consensus       176 s~gvl~felltg~~pf~~------~~--------------~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  176 SFGVLAFELLTGTLPFGG------DT--------------MKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhhhhHHHHhhCCCCCch------HH--------------HHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            999999999999999974      11              1111122233344555566667778889999999755


No 416
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.50  E-value=4.3e-14  Score=102.94  Aligned_cols=146  Identities=23%  Similarity=0.310  Sum_probs=102.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeee--cccccceeeccCCCcceeeeecccccccccccccCCCC---
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRI--ADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKV---   75 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l--~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~---   75 (200)
                      |++.|++|||+. ..=|...-|++..++++.+.+.++  +|--+++...        . ..-.+.|++||.+.....   
T Consensus       297 diargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~--------g-r~y~pawmspealqrkped~n  366 (448)
T KOG0195|consen  297 DIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV--------G-RAYSPAWMSPEALQRKPEDLN  366 (448)
T ss_pred             HHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeecc--------c-cccCcccCCHHHHhcCchhcc
Confidence            578999999975 344666778999999998877665  3433332211        1 123678999998776543   


Q ss_pred             CCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCC
Q 047677           76 DEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPAL  155 (200)
Q Consensus        76 ~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  155 (200)
                      -.++|+|||++++||+.|...||.....-.-           ......+.++..+|+.   .+..+.+++.-|++.||.+
T Consensus       367 ~raadmwsfaillwel~trevpfadlspmec-----------gmkialeglrv~ippg---is~hm~klm~icmnedpgk  432 (448)
T KOG0195|consen  367 IRAADMWSFAILLWELNTREVPFADLSPMEC-----------GMKIALEGLRVHIPPG---ISRHMNKLMNICMNEDPGK  432 (448)
T ss_pred             hhhhhHHHHHHHHHHhhccccccccCCchhh-----------hhhhhhccccccCCCC---ccHHHHHHHHHHhcCCCCc
Confidence            3568999999999999999999976543211           1112223333444444   3346777888999999999


Q ss_pred             CCCHHHHHHHHHhhC
Q 047677          156 RPTMRSVVQMLEEAE  170 (200)
Q Consensus       156 Rpt~~~il~~L~~~~  170 (200)
                      ||.+..++-.|+++.
T Consensus       433 rpkfdmivpilekm~  447 (448)
T KOG0195|consen  433 RPKFDMIVPILEKMI  447 (448)
T ss_pred             CCCcceehhhHHHhc
Confidence            999999999999864


No 417
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.43  E-value=2e-13  Score=97.84  Aligned_cols=156  Identities=22%  Similarity=0.301  Sum_probs=104.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC---CCeeecccccceeeccCCCcc-----eeeeecccccccccccccC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF---LKPRIADFGLARIVQSNGGKD-----TTHVIAGTTGYIAPEYGYT   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~---~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~   72 (200)
                      |++.-++|+|   .++++||||||+|.+..-.   ..+.++|||++..+....+..     ......||..|++-....+
T Consensus       119 Qml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g  195 (341)
T KOG1163|consen  119 QMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG  195 (341)
T ss_pred             HHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhh
Confidence            5677899999   8999999999999999653   557899999998776543321     1223458889998877777


Q ss_pred             CCCCCccchhhHhHHHHHHHhCCCCCCCCCCCch-hHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCC
Q 047677           73 SKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENK-DIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTT  151 (200)
Q Consensus        73 ~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  151 (200)
                      ...+.+.|+-|+|.++.+...|..||+....... ...+.+.+.  .-....+.+...+|..+       .-.+.-|-..
T Consensus       196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek--K~s~~ie~LC~G~P~EF-------~myl~Y~R~L  266 (341)
T KOG1163|consen  196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK--KMSTPIEVLCKGFPAEF-------AMYLNYCRGL  266 (341)
T ss_pred             hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh--hcCCCHHHHhCCCcHHH-------HHHHHHHhhc
Confidence            7788899999999999999999999998765432 222222221  12333344455554432       2333345455


Q ss_pred             CCCCCCCHHHHHHHHHh
Q 047677          152 QPALRPTMRSVVQMLEE  168 (200)
Q Consensus       152 dp~~Rpt~~~il~~L~~  168 (200)
                      --++-|....+-+.+.-
T Consensus       267 ~F~E~Pdy~ylrqlFri  283 (341)
T KOG1163|consen  267 GFEEKPDYMYLRQLFRI  283 (341)
T ss_pred             CCCCCCcHHHHHHHHHH
Confidence            55566666555555433


No 418
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.42  E-value=8e-13  Score=98.69  Aligned_cols=158  Identities=18%  Similarity=0.292  Sum_probs=109.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-----CCeeecccccceeeccCCCcc-----eeeeecccccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-----LKPRIADFGLARIVQSNGGKD-----TTHVIAGTTGYIAPEYG   70 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-----~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~~pE~~   70 (200)
                      |++.-++|+|   ++.+|+|||||+|.||+..     ..+.++|||+++....+.+..     ......||-+|++-...
T Consensus       132 Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTH  208 (449)
T KOG1165|consen  132 QMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTH  208 (449)
T ss_pred             HHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecc
Confidence            4567788999   8899999999999999643     457899999999887665432     22334589999999988


Q ss_pred             cCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhH-HHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhc
Q 047677           71 YTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDI-VRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCT  149 (200)
Q Consensus        71 ~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  149 (200)
                      .+...+.+.|.-|||=++.+.+.|..||+....+.... .+-+  ....+.+..+.+...+|.       ++..-+.-.-
T Consensus       209 lGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI--Ge~Kr~T~i~~Lc~g~P~-------efa~Yl~yvR  279 (449)
T KOG1165|consen  209 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI--GETKRSTPIEVLCEGFPE-------EFATYLRYVR  279 (449)
T ss_pred             ccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh--ccccccCCHHHHHhcCHH-------HHHHHHHHHH
Confidence            89999999999999999999999999999876554322 1111  112222333333333333       2222333333


Q ss_pred             CCCCCCCCCHHHHHHHHHhhC
Q 047677          150 TTQPALRPTMRSVVQMLEEAE  170 (200)
Q Consensus       150 ~~dp~~Rpt~~~il~~L~~~~  170 (200)
                      ..+-.+-|..+.+...+.++.
T Consensus       280 ~L~F~E~PDYdylr~Lf~dvl  300 (449)
T KOG1165|consen  280 RLDFFETPDYDYLRKLFDDVL  300 (449)
T ss_pred             hcCcccCCCHHHHHHHHHHHH
Confidence            567778888887777665543


No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.28  E-value=1.1e-12  Score=93.63  Aligned_cols=96  Identities=22%  Similarity=0.179  Sum_probs=68.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccC-CCCCeEeCCCCCeeecccccceeeccCCCc----ce-------eeeecccccccccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDV-KSSNILLDEFLKPRIADFGLARIVQSNGGK----DT-------THVIAGTTGYIAPE   68 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dl-k~~nil~~~~~~~~l~df~~~~~~~~~~~~----~~-------~~~~~~~~~~~~pE   68 (200)
                      |++++|.++|   ++|++|||| ||.||+++.++.++|+|||++.........    ..       ......++.++.|+
T Consensus        99 qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~  175 (218)
T PRK12274         99 AARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPV  175 (218)
T ss_pred             HHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence            4678999999   899999999 799999999999999999999755433210    00       01112355666665


Q ss_pred             cccCC-CCC-CccchhhHhHHHHHHHhCCCCCC
Q 047677           69 YGYTS-KVD-EKSDVYSFGVVLMELVTGKKPIE   99 (200)
Q Consensus        69 ~~~~~-~~~-~~~Di~slG~~~~~l~~g~~pf~   99 (200)
                      ...-. ..+ ...+.++.|+-+|.++|+..+.-
T Consensus       176 ~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~  208 (218)
T PRK12274        176 ERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW  208 (218)
T ss_pred             HHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence            43222 223 45677889999999999887754


No 420
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28  E-value=1.1e-12  Score=108.04  Aligned_cols=150  Identities=28%  Similarity=0.382  Sum_probs=111.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC-Ceeecccccceeecc-CCCcceeeeecc-cccccccccccCCCC-C
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFL-KPRIADFGLARIVQS-NGGKDTTHVIAG-TTGYIAPEYGYTSKV-D   76 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~-~~~l~df~~~~~~~~-~~~~~~~~~~~~-~~~~~~pE~~~~~~~-~   76 (200)
                      |+..++.|+|.  ..++.|+|+||+|.+++.++ .++..|||++..+.. .+.........| ++.|.+||...+..+ .
T Consensus       131 ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~  208 (601)
T KOG0590|consen  131 QLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRG  208 (601)
T ss_pred             hhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcC
Confidence            56788999995  57899999999999999999 999999999988776 444444444557 999999999888543 5


Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      ...|+||.|+++.-+++|..||......+..+..|...           ........+........+++.+++..+|..|
T Consensus       209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r  277 (601)
T KOG0590|consen  209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN-----------KGRFTQLPWNSISDQAHDLLHKILKENPSNR  277 (601)
T ss_pred             CCcccccccccccccccCCCCccccccccccceeeccc-----------ccccccCccccCChhhhhcccccccCCchhc
Confidence            77899999999999999999998665554333322211           0010111123333456677789999999999


Q ss_pred             CCHHHHH
Q 047677          157 PTMRSVV  163 (200)
Q Consensus       157 pt~~~il  163 (200)
                      .+.+++-
T Consensus       278 ~s~~~~~  284 (601)
T KOG0590|consen  278 LSIEELK  284 (601)
T ss_pred             ccccccc
Confidence            9998763


No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.27  E-value=2.2e-12  Score=100.10  Aligned_cols=69  Identities=23%  Similarity=0.281  Sum_probs=53.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccC-CCCCeEeCCCCCeeecccccceeeccCCCcce------eeeecccccccccccccC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDV-KSSNILLDEFLKPRIADFGLARIVQSNGGKDT------THVIAGTTGYIAPEYGYT   72 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dl-k~~nil~~~~~~~~l~df~~~~~~~~~~~~~~------~~~~~~~~~~~~pE~~~~   72 (200)
                      |+++||.|||   ++||+|||| ||+||+++.++.++|+|||++...........      .....++..|.+||....
T Consensus       119 ~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        119 SAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             HHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            5789999999   899999999 99999999889999999999987654321111      122346777889987643


No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22  E-value=5.7e-11  Score=100.95  Aligned_cols=145  Identities=19%  Similarity=0.152  Sum_probs=97.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeC-------CCCCeeecccccceeeccCCCcceeeeecccccccccccccCC
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLD-------EFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTS   73 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~-------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~   73 (200)
                      |++..|+.||   ..+|||+||||.|+++.       ....++|+|||.+.-+.-......-....++..+-++|+..+.
T Consensus       802 qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr  878 (974)
T KOG1166|consen  802 QMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR  878 (974)
T ss_pred             HHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCC
Confidence            4678889999   89999999999999993       3456899999998766543333333344578889999999999


Q ss_pred             CCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCC
Q 047677           74 KVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQ  152 (200)
Q Consensus        74 ~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~d  152 (200)
                      .++..+|-|.|+.+++-|+.|+..-                   ........+...++.. ..+.+..+   +..+|+.|
T Consensus       879 pWtYq~DyfGlAa~~h~mLFG~y~q-------------------~~~g~~~~~~~~~~Ry~~~~~W~~~---F~~lLN~~  936 (974)
T KOG1166|consen  879 PWTYQIDYFGLAATVHVMLFGKYME-------------------VKNGSSWMVKTNFPRYWKRDMWNKF---FDLLLNPD  936 (974)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHH-------------------hcCCcceeccccchhhhhHHHHHHH---HHHHhCcC
Confidence            9999999999999999999885321                   0011111111222222 23333343   44556666


Q ss_pred             CCCCCCHHHHHHHHHhhC
Q 047677          153 PALRPTMRSVVQMLEEAE  170 (200)
Q Consensus       153 p~~Rpt~~~il~~L~~~~  170 (200)
                      -..=|...++...|+...
T Consensus       937 ~~~~p~l~~lr~~~~~~~  954 (974)
T KOG1166|consen  937 CDTLPNLQELRTELEEVL  954 (974)
T ss_pred             cccchhHHHHHHHHHHHH
Confidence            666677777777666543


No 423
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.16  E-value=3.5e-12  Score=92.66  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=54.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ++++++..+|   +.|++|+|++|.|++++.++ ++++|||.........  ...            .++....+..++|
T Consensus       143 ~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~--a~d------------~~vler~y~~~~d  204 (232)
T PRK10359        143 KIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK--AKD------------RIDLERHYGIKNE  204 (232)
T ss_pred             HHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh--hHH------------HHHHHhHhccccc
Confidence            4678889999   89999999999999999888 9999999875432110  000            0222334556899


Q ss_pred             hhhHhHHHHHHH
Q 047677           81 VYSFGVVLMELV   92 (200)
Q Consensus        81 i~slG~~~~~l~   92 (200)
                      +|+||+++....
T Consensus       205 i~~lg~~~~~~~  216 (232)
T PRK10359        205 IKDLGYYLLIYK  216 (232)
T ss_pred             ccceeEeehHHH
Confidence            999999876553


No 424
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.06  E-value=5.8e-11  Score=96.34  Aligned_cols=149  Identities=19%  Similarity=0.285  Sum_probs=98.4

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcce-------eeeecccccccccccccCCC
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDT-------THVIAGTTGYIAPEYGYTSK   74 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~   74 (200)
                      ++.|+.|+|.  +-++||++|.|++|.+...+..|++.|+.+.....+.....       +........|.+||++.+..
T Consensus       108 v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~  185 (700)
T KOG2137|consen  108 VADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT  185 (700)
T ss_pred             ccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence            4578999997  77999999999999999999999999998755433211111       11122456899999998887


Q ss_pred             CCCccchhhHhHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCC
Q 047677           75 VDEKSDVYSFGVVLMELVT-GKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQP  153 (200)
Q Consensus        75 ~~~~~Di~slG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  153 (200)
                      ...++|+||+|+++|.+.. |+..+.......-....    .    ..    .+...-........++.+=+.+++..++
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~----~----~~----~~~~~~~~s~~~p~el~~~l~k~l~~~~  253 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS----R----NL----LNAGAFGYSNNLPSELRESLKKLLNGDS  253 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhccCCcchhhhh----h----cc----cccccccccccCcHHHHHHHHHHhcCCc
Confidence            8899999999999999985 54444322111100000    0    00    0000001113334466667778999999


Q ss_pred             CCCCCHHHHHH
Q 047677          154 ALRPTMRSVVQ  164 (200)
Q Consensus       154 ~~Rpt~~~il~  164 (200)
                      ..||++.++..
T Consensus       254 ~~rp~~~~l~~  264 (700)
T KOG2137|consen  254 AVRPTLDLLLS  264 (700)
T ss_pred             ccCcchhhhhc
Confidence            99997776544


No 425
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.01  E-value=7.3e-09  Score=80.49  Aligned_cols=164  Identities=15%  Similarity=0.166  Sum_probs=105.6

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeeccccccccccccc-----CCCCC
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGY-----TSKVD   76 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~-----~~~~~   76 (200)
                      ++.+.+-||   ..|.+-+|++++|+++++++.+.|+|-.......+   .....+..|...|++||.-.     +..-.
T Consensus       126 lA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n---g~~~~cpVg~~eftPPElQ~~~sf~g~~r~  199 (637)
T COG4248         126 LASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN---GTLHLCPVGVSEFTPPELQTLPSFVGFERT  199 (637)
T ss_pred             HHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeeccC---CceEecccCccccCCHHHhccccccccCCC
Confidence            567888899   89999999999999999999999988554433322   22333445788999999643     23345


Q ss_pred             CccchhhHhHHHHHHHhC-CCCCCCCCC---CchhHHHHHHHh-h-cccchhhhhccCCCCCchHHHHHHHHHHHHHhcC
Q 047677           77 EKSDVYSFGVVLMELVTG-KKPIEPEYG---ENKDIVRWVCSH-F-NSKQSVLTLVDSSIPETFKENAVEILRIAVLCTT  150 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g-~~pf~~~~~---~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  150 (200)
                      ...|.|.||+++++++.| ++||.....   ..+.....+... . .......-.........+....+.+..+..+|+.
T Consensus       200 ~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~  279 (637)
T COG4248         200 ANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFT  279 (637)
T ss_pred             ccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhc
Confidence            678999999999999885 899976431   112222111110 0 0111111111111111245555677778889986


Q ss_pred             C--CCCCCCCHHHHHHHHHhhCC
Q 047677          151 T--QPALRPTMRSVVQMLEEAEP  171 (200)
Q Consensus       151 ~--dp~~Rpt~~~il~~L~~~~~  171 (200)
                      .  .+.-|||++-.+..|..+..
T Consensus       280 ~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         280 ESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHH
Confidence            5  46789999999988876543


No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.99  E-value=1.7e-10  Score=82.39  Aligned_cols=43  Identities=26%  Similarity=0.269  Sum_probs=38.8

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      |++.++.++|   + +|++|+||||.||+++ ++.++|+|||++....
T Consensus       125 ~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         125 QVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            5788999999   6 9999999999999998 7899999999986654


No 427
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.96  E-value=2e-10  Score=81.88  Aligned_cols=42  Identities=19%  Similarity=0.139  Sum_probs=36.9

Q ss_pred             Chhhhhhhh-hcCCCCCeEeccCCCCCeEeCCCCCeeecccccceee
Q 047677            1 GAAKGLEYL-HHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIV   46 (200)
Q Consensus         1 qi~~~l~~L-h~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~   46 (200)
                      |++++|.++ |   +.|++||||||.||+++ ++.++|+|||++...
T Consensus       125 qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         125 QVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            578899999 5   78999999999999998 478999999998644


No 428
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.90  E-value=2.2e-09  Score=80.58  Aligned_cols=146  Identities=18%  Similarity=0.290  Sum_probs=90.8

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec--cCCCcceeeeecccccccccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ--SNGGKDTTHVIAGTTGYIAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~   78 (200)
                      ||+.||.|||.+ .--++|+++....+++..+|-+|++--.-.....  ............+.+.|.+|+..........
T Consensus       184 qIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a  262 (458)
T KOG1266|consen  184 QILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA  262 (458)
T ss_pred             HHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc
Confidence            688999999976 6789999999999999999888874321111111  1111111222346788999999888888889


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|||+||+.+.++.-+..--......-.           ........+. .+...      .-..++.+|++-.|..||+
T Consensus       263 ~dIy~fgmcAlemailEiq~tnseS~~~-----------~ee~ia~~i~-~len~------lqr~~i~kcl~~eP~~rp~  324 (458)
T KOG1266|consen  263 SDIYKFGMCALEMAILEIQSTNSESKVE-----------VEENIANVII-GLENG------LQRGSITKCLEGEPNGRPD  324 (458)
T ss_pred             hhhhhhhHHHHHHHHheeccCCCcceee-----------hhhhhhhhee-eccCc------cccCcCcccccCCCCCCcc
Confidence            9999999999998766432111110000           0000000000 00000      0123667999999999999


Q ss_pred             HHHHHHH
Q 047677          159 MRSVVQM  165 (200)
Q Consensus       159 ~~~il~~  165 (200)
                      ++.++-.
T Consensus       325 ar~llfH  331 (458)
T KOG1266|consen  325 ARLLLFH  331 (458)
T ss_pred             hhhhhcC
Confidence            9987643


No 429
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.79  E-value=2.2e-09  Score=79.29  Aligned_cols=42  Identities=29%  Similarity=0.353  Sum_probs=38.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      |++++|.+||   +.||+|+||||.||+++.++.++|+|||.+..
T Consensus       150 ~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        150 AIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            4788999999   89999999999999999888999999998754


No 430
>smart00090 RIO RIO-like kinase.
Probab=98.74  E-value=4.6e-09  Score=77.49  Aligned_cols=43  Identities=21%  Similarity=0.196  Sum_probs=38.2

Q ss_pred             ChhhhhhhhhcCCCCC-eEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            1 GAAKGLEYLHHGCARP-VIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~g-i~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      |+++++.+||   ++| ++|+||||.||+++ .+.++|+|||.+....
T Consensus       156 qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      156 DILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             HHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            5788999999   899 99999999999999 7899999999886543


No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.70  E-value=8.1e-09  Score=74.14  Aligned_cols=44  Identities=23%  Similarity=0.191  Sum_probs=39.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      ++++++.++|   +.|++|+||+|.||+++.++.++|+|||.+....
T Consensus       133 ~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         133 EILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             HHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence            4678889999   7999999999999999999999999999985543


No 432
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.56  E-value=8.3e-08  Score=77.00  Aligned_cols=152  Identities=21%  Similarity=0.288  Sum_probs=99.8

Q ss_pred             hhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcce---eeeecccccccccccccCCCCCCccc
Q 047677            5 GLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDT---THVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         5 ~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~---~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||..+|   +.+++|.|++|.|++...+ ..++++||+....+....-...   .....+...|++||...+ .+....|
T Consensus       234 al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~d  309 (524)
T KOG0601|consen  234 ALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASD  309 (524)
T ss_pred             cccccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhh
Confidence            777777   8999999999999999998 8899999999887765432222   222246778999997644 4678899


Q ss_pred             hhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCc-hHHHHHHHHHHHHHhcCCCCCCCCCH
Q 047677           81 VYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPET-FKENAVEILRIAVLCTTTQPALRPTM  159 (200)
Q Consensus        81 i~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~  159 (200)
                      +|++|.++.+...+...........         +...+..+       ++.. ...-...+...+.+|+..+|-.|++.
T Consensus       310 i~sl~ev~l~~~l~~~~~~~g~~~~---------W~~~r~~~-------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~  373 (524)
T KOG0601|consen  310 IFSLGEVILEAILGSHLPSVGKNSS---------WSQLRQGY-------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTA  373 (524)
T ss_pred             hcchhhhhHhhHhhcccccCCCCCC---------cccccccc-------CchhhhcCcchhhhhHHHHhcCcchhhhhHH
Confidence            9999999999988876654332110         00001100       1111 11111233337778999999999988


Q ss_pred             HHHHHHHHhhCCCCccce
Q 047677          160 RSVVQMLEEAEPCNLVGI  177 (200)
Q Consensus       160 ~~il~~L~~~~~~~~~~~  177 (200)
                      + ++..+.-+.......+
T Consensus       374 q-~~~~l~~i~s~~~~~~  390 (524)
T KOG0601|consen  374 Q-ILTALNVIHSKLFVHL  390 (524)
T ss_pred             H-HHhccccccchhhhcc
Confidence            6 4444555555554444


No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.54  E-value=3.5e-08  Score=70.05  Aligned_cols=43  Identities=26%  Similarity=0.189  Sum_probs=37.5

Q ss_pred             ChhhhhhhhhcCCC-CCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            1 GAAKGLEYLHHGCA-RPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         1 qi~~~l~~Lh~~~~-~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      |++.++.++|   + .|++|+||||.||+++ ++.++++|||.+....
T Consensus       122 ~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         122 QILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             HHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            4677888899   6 9999999999999999 8999999999985543


No 434
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.52  E-value=1.2e-07  Score=80.91  Aligned_cols=140  Identities=26%  Similarity=0.375  Sum_probs=98.6

Q ss_pred             hhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeecc---------------------CCCc--------c
Q 047677            3 AKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQS---------------------NGGK--------D   53 (200)
Q Consensus         3 ~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~---------------------~~~~--------~   53 (200)
                      .++++|||   ...+.|+|++|.|.++..++..++.+|+.....+.                     ....        .
T Consensus       914 vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~  990 (1205)
T KOG0606|consen  914 VQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEAR  990 (1205)
T ss_pred             Hhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhh
Confidence            46788888   66689999999999999999999999873321110                     0000        0


Q ss_pred             eeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccC--CCC
Q 047677           54 TTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDS--SIP  131 (200)
Q Consensus        54 ~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  131 (200)
                      ......+++.|++||...+......+|+|+.|+++++.++|..||.......               ....+.+.  ..+
T Consensus       991 ~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~---------------~f~ni~~~~~~~p 1055 (1205)
T KOG0606|consen  991 RKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ---------------IFENILNRDIPWP 1055 (1205)
T ss_pred             ccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh---------------hhhccccCCCCCC
Confidence            1223458899999999999999999999999999999999999997654321               11111111  222


Q ss_pred             CchHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 047677          132 ETFKENAVEILRIAVLCTTTQPALRPTMR  160 (200)
Q Consensus       132 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  160 (200)
                      ...........+++...+..+|.+|..+.
T Consensus      1056 ~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1056 EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCccccChhhhhhhhhhhccCchhccCcc
Confidence            33344444566777788889999998775


No 435
>PRK10345 hypothetical protein; Provisional
Probab=98.51  E-value=4.2e-08  Score=70.93  Aligned_cols=39  Identities=26%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             hhhhh-hhhhcCCCCCeEeccCCCCCeEeCC----CCCeeecccccc
Q 047677            2 AAKGL-EYLHHGCARPVIHRDVKSSNILLDE----FLKPRIADFGLA   43 (200)
Q Consensus         2 i~~~l-~~Lh~~~~~gi~h~dlk~~nil~~~----~~~~~l~df~~~   43 (200)
                      ++.++ +|||   +++|+||||||+||+++.    .+.++|+|++.+
T Consensus       113 ~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        113 LLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            45556 8999   899999999999999964    347999995443


No 436
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.49  E-value=6.4e-08  Score=69.42  Aligned_cols=41  Identities=29%  Similarity=0.444  Sum_probs=37.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      |++++|++||   +.|++|+|++|.|++++ .+.++++|||.+..
T Consensus        98 ~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        98 EIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            4788999999   89999999999999999 78999999998754


No 437
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.43  E-value=1.1e-07  Score=68.89  Aligned_cols=41  Identities=34%  Similarity=0.475  Sum_probs=36.6

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      +++.+|+++|   +.|++|+|++|.||+++ .+.++|+|||.+..
T Consensus       103 ~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        103 EIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            4678899999   89999999999999999 78899999998754


No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.42  E-value=7.2e-08  Score=79.41  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=37.1

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      |++++|.+||   +.|++|||+||.||++ .++.++|+|||++..
T Consensus       436 ~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        436 KVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            5788999999   8999999999999999 568899999999854


No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.42  E-value=6.9e-07  Score=73.00  Aligned_cols=88  Identities=16%  Similarity=0.237  Sum_probs=62.4

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      ||+.||.|||+  ..+++|++|.-..|+++..|..+|++|.++........  ..........|..|+.+....  ...|
T Consensus       112 qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D  185 (690)
T KOG1243|consen  112 QILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSID  185 (690)
T ss_pred             HHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchh
Confidence            68899999986  67899999999999999999999999988744322111  011111122344554332222  4569


Q ss_pred             hhhHhHHHHHHHhC
Q 047677           81 VYSFGVVLMELVTG   94 (200)
Q Consensus        81 i~slG~~~~~l~~g   94 (200)
                      .|.|||++++++.|
T Consensus       186 ~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  186 SWGLGCLIEELFNG  199 (690)
T ss_pred             hhhHHHHHHHHhCc
Confidence            99999999999998


No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=98.40  E-value=1.8e-07  Score=63.56  Aligned_cols=45  Identities=29%  Similarity=0.229  Sum_probs=38.9

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      ++++++++||..+..+++|+|++|.|++++..+.++++||+.+..
T Consensus        94 ~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          94 QLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            367889999976557899999999999999988999999998743


No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.31  E-value=4.2e-07  Score=73.07  Aligned_cols=140  Identities=21%  Similarity=0.229  Sum_probs=88.2

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCC-CCeeecccccceeeccCCCcceeeeecccccc-cccccccCCCCCCc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEF-LKPRIADFGLARIVQSNGGKDTTHVIAGTTGY-IAPEYGYTSKVDEK   78 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~-~~pE~~~~~~~~~~   78 (200)
                      |++.++.++|   ++.++|.|++|.||++..+ +..+++||+....+....    .........| .++.......+..+
T Consensus       374 q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~  446 (524)
T KOG0601|consen  374 QILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS----GVFHHIDRLYPIAEILLEDYPHLSK  446 (524)
T ss_pred             HHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccceec----ccccccccccccchhhccccccccc
Confidence            4566777888   8999999999999999886 778899998875422110    0011122233 24444455567789


Q ss_pred             cchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 047677           79 SDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALRPT  158 (200)
Q Consensus        79 ~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  158 (200)
                      +|+++||..+.+.+++...-...                  .....+.....+..+... ..+..+...+...++..||.
T Consensus       447 ~~~~sl~~~~~e~~~~~~ls~~~------------------~~~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l  507 (524)
T KOG0601|consen  447 ADIFSLGLSVDEAITGSPLSESG------------------VQSLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPS  507 (524)
T ss_pred             cccccccccccccccCcccCccc------------------ccceeeecccccCCCchH-HhhhhhhhhhcCCccccchh
Confidence            99999999999998876532211                  011111112222222211 45666777888999999998


Q ss_pred             HHHHHHHH
Q 047677          159 MRSVVQML  166 (200)
Q Consensus       159 ~~~il~~L  166 (200)
                      +.++....
T Consensus       508 ~~~l~~~~  515 (524)
T KOG0601|consen  508 AVELSLHS  515 (524)
T ss_pred             hhhhcccc
Confidence            87765543


No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.21  E-value=6.3e-07  Score=63.92  Aligned_cols=43  Identities=16%  Similarity=0.157  Sum_probs=35.1

Q ss_pred             Chhhhhhhh-hcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            1 GAAKGLEYL-HHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         1 qi~~~l~~L-h~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      |++++|..| |   +.|++|+||++.||++.. +.++++||+.+....
T Consensus       132 ~i~~~l~~l~H---~~glVHGDLs~~NIL~~~-~~v~iIDF~qav~~~  175 (197)
T cd05146         132 QVLSMMKQLYK---ECNLVHADLSEYNMLWHD-GKVWFIDVSQSVEPT  175 (197)
T ss_pred             HHHHHHHHHHH---hCCeecCCCCHHHEEEEC-CcEEEEECCCceeCC
Confidence            355677777 6   789999999999999974 789999999886544


No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.07  E-value=2.5e-06  Score=59.46  Aligned_cols=40  Identities=35%  Similarity=0.400  Sum_probs=33.8

Q ss_pred             ChhhhhhhhhcCCCCC-----eEeccCCCCCeEeCCCCCeeecccccce
Q 047677            1 GAAKGLEYLHHGCARP-----VIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~g-----i~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      +++++|+.||   +.+     ++|+|++|.||+++ .+.++++||+.+.
T Consensus        91 ~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          91 KIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            3678899999   555     59999999999998 5789999999864


No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.86  E-value=1e-05  Score=56.66  Aligned_cols=37  Identities=32%  Similarity=0.498  Sum_probs=31.1

Q ss_pred             hhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677            5 GLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus         5 ~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      -+.-||   ..||+|+||.++|+++... .+.++|||+..+
T Consensus       104 ~vg~lH---~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~  140 (204)
T COG3642         104 LVGKLH---KAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF  140 (204)
T ss_pred             HHHHHH---hcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence            355677   8999999999999999874 488999999754


No 445
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.81  E-value=1.6e-05  Score=63.88  Aligned_cols=39  Identities=23%  Similarity=0.266  Sum_probs=33.9

Q ss_pred             hhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            6 LEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         6 l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      +..+|   ..|++|+|+||.||++..++.++++|||++..+.
T Consensus       270 l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       270 LNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            34455   8999999999999999999999999999986654


No 446
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.77  E-value=1.2e-05  Score=58.11  Aligned_cols=41  Identities=29%  Similarity=0.351  Sum_probs=35.3

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCC---Ceeeccccccee
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFL---KPRIADFGLARI   45 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~---~~~l~df~~~~~   45 (200)
                      +++.++-||   ..|++|+|+++.||++...+   .+.++||+-+..
T Consensus       127 l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  127 LARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            566778888   89999999999999998876   788999987754


No 447
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.73  E-value=3.6e-05  Score=54.71  Aligned_cols=33  Identities=36%  Similarity=0.451  Sum_probs=26.3

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      ..|++|+||.+.||++..+ .+.++||+.+....
T Consensus       125 ~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  125 KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             CTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             hcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            8999999999999999886 99999999876543


No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.66  E-value=1.9e-05  Score=59.26  Aligned_cols=40  Identities=30%  Similarity=0.307  Sum_probs=34.0

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCC-------CCCeeecccccce
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDE-------FLKPRIADFGLAR   44 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~-------~~~~~l~df~~~~   44 (200)
                      +++.++-||   ..|++|+|+++.||++..       ...+.|+||+.+.
T Consensus       147 la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        147 VATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            567788888   899999999999999974       4678899999774


No 449
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.33  E-value=0.0002  Score=50.35  Aligned_cols=40  Identities=38%  Similarity=0.571  Sum_probs=31.9

Q ss_pred             hhhhhhhcCCCCCeEeccCCCCCeEeCCCCC---eeecccccceee
Q 047677            4 KGLEYLHHGCARPVIHRDVKSSNILLDEFLK---PRIADFGLARIV   46 (200)
Q Consensus         4 ~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~---~~l~df~~~~~~   46 (200)
                      +.+.-||   .++++|+||..+||++..++.   +.++|||++...
T Consensus       124 ~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  124 ELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             HHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            4567788   899999999999999965543   468999997544


No 450
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.28  E-value=0.00012  Score=60.20  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=30.8

Q ss_pred             CCCeEeccCCCCCeEeCCCC----Ceeecccccceeec
Q 047677           14 ARPVIHRDVKSSNILLDEFL----KPRIADFGLARIVQ   47 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~----~~~l~df~~~~~~~   47 (200)
                      ..|++|+|+||.||+++.++    .++++|||++..+.
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            78999999999999999887    89999999987664


No 451
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.24  E-value=0.0002  Score=51.84  Aligned_cols=38  Identities=24%  Similarity=0.269  Sum_probs=31.0

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      +.+++.-||   +.|++|+|.+|.|++++. +.++++|++..
T Consensus       144 i~~~ikqlH---~~G~~HGD~hpgNFlv~~-~~i~iID~~~k  181 (229)
T PF06176_consen  144 IVEAIKQLH---KHGFYHGDPHPGNFLVSN-NGIRIIDTQGK  181 (229)
T ss_pred             HHHHHHHHH---HcCCccCCCCcCcEEEEC-CcEEEEECccc
Confidence            445666677   899999999999999986 55889998754


No 452
>PRK09902 hypothetical protein; Provisional
Probab=97.10  E-value=0.00024  Score=51.18  Aligned_cols=41  Identities=17%  Similarity=0.101  Sum_probs=35.2

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCC--eeeccccccee
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLK--PRIADFGLARI   45 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~--~~l~df~~~~~   45 (200)
                      +++.++-||   +.|+.|+|+.+.||++...+.  +.++||..++.
T Consensus       137 va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        137 VALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            677889999   899999999999999986667  88999987643


No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.49  E-value=0.0023  Score=47.82  Aligned_cols=31  Identities=29%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..|+||+|+++-||+++.+|.+.++||-.+.
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEEeCcccc
Confidence            4799999999999999999999999986653


No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=96.18  E-value=0.0027  Score=46.81  Aligned_cols=43  Identities=23%  Similarity=0.284  Sum_probs=33.8

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      +++.+.-|-.  ..|+||+||..-|||+. .+.+.++|++.+....
T Consensus       175 ~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         175 VVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence            4455555552  37899999999999999 6899999999886544


No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=95.69  E-value=0.0083  Score=43.37  Aligned_cols=31  Identities=23%  Similarity=0.321  Sum_probs=26.3

Q ss_pred             CCCeEeccCCCCCeEeCC--CCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDE--FLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~--~~~~~l~df~~~~   44 (200)
                      ..+++|+|+++.||+++.  .+.+.++||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            467999999999999988  5667899998764


No 456
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=95.37  E-value=0.014  Score=43.07  Aligned_cols=31  Identities=23%  Similarity=0.336  Sum_probs=25.6

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..+++|+|+++.|++++..+...|+||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            4569999999999999876556799998763


No 457
>PRK05231 homoserine kinase; Provisional
Probab=95.20  E-value=0.012  Score=45.37  Aligned_cols=30  Identities=33%  Similarity=0.417  Sum_probs=25.5

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      ..|++|+|+++.||+++.+....++||+.+
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccc
Confidence            358999999999999987655679999876


No 458
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=95.18  E-value=0.016  Score=44.32  Aligned_cols=30  Identities=33%  Similarity=0.350  Sum_probs=26.5

Q ss_pred             CCCeEeccCCCCCeEeCCC----CCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEF----LKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~----~~~~l~df~~~   43 (200)
                      ..+++|+|+.+.||+++.+    +.+.++||..+
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            4578999999999999875    78999999876


No 459
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=95.10  E-value=0.016  Score=42.51  Aligned_cols=31  Identities=26%  Similarity=0.325  Sum_probs=26.5

Q ss_pred             CCCeEeccCCCCCeEeCC-CCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDE-FLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~   44 (200)
                      ..+++|+|+++.||+++. ++.+.++||..+.
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            357999999999999997 5779999998763


No 460
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=95.09  E-value=0.026  Score=50.17  Aligned_cols=135  Identities=19%  Similarity=0.185  Sum_probs=75.5

Q ss_pred             hhhhhhhhhcCCCCCeEeccCCCC---CeEeCCCCCeeec--ccccceeeccCCCcceeeeecccccccccccccCCCCC
Q 047677            2 AAKGLEYLHHGCARPVIHRDVKSS---NILLDEFLKPRIA--DFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVD   76 (200)
Q Consensus         2 i~~~l~~Lh~~~~~gi~h~dlk~~---nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~   76 (200)
                      +.+|++|+|.   ....|.-+...   +--.+..+....+  +|+............   .......+.+++......+.
T Consensus       295 ~~~GL~~~h~---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~  368 (1351)
T KOG1035|consen  295 LLEGLAYLHS---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAK  368 (1351)
T ss_pred             HhhhHHHHHH---hccceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccch
Confidence            5689999994   43333333333   2222233444444  666665544322111   11224455666665555444


Q ss_pred             C--ccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCC
Q 047677           77 E--KSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPA  154 (200)
Q Consensus        77 ~--~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  154 (200)
                      .  ..|+|.+|.....+..|..+-...                  ......+....    ..   .+.....+|+..+++
T Consensus       369 ~~r~~dL~~lgll~~~~~~~~~i~~~~------------------~~~~~~l~~~~----~~---~~~d~~~~~~~~~~~  423 (1351)
T KOG1035|consen  369 KSRLTDLWCLGLLLLQLSQGEDISEKS------------------AVPVSLLDVLS----TS---ELLDALPKCLDEDSE  423 (1351)
T ss_pred             hhhhhHHHHHHHHHhhhhhcCcccccc------------------cchhhhhcccc----ch---hhhhhhhhhcchhhh
Confidence            3  469999999999988776542110                  01111111111    10   456677799999999


Q ss_pred             CCCCHHHHHHHHH
Q 047677          155 LRPTMRSVVQMLE  167 (200)
Q Consensus       155 ~Rpt~~~il~~L~  167 (200)
                      +|+++.+++...-
T Consensus       424 ~Rl~~~~ll~~~f  436 (1351)
T KOG1035|consen  424 ERLSALELLTHPF  436 (1351)
T ss_pred             hccchhhhhhchh
Confidence            9999999987753


No 461
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=95.05  E-value=0.17  Score=41.48  Aligned_cols=73  Identities=21%  Similarity=0.417  Sum_probs=53.0

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccc
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSD   80 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D   80 (200)
                      |+..||.++|   +.|+.-+-|.+.+|++...-++++..-|+.........              +|     ..--.+-|
T Consensus       401 QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~--------------~~-----le~~Qq~D  458 (655)
T KOG3741|consen  401 QLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT--------------EP-----LESQQQND  458 (655)
T ss_pred             HHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCCCC--------------cc-----hhHHhhhh
Confidence            6788999999   89998899999999998877777766555443332210              00     00113568


Q ss_pred             hhhHhHHHHHHHhCC
Q 047677           81 VYSFGVVLMELVTGK   95 (200)
Q Consensus        81 i~slG~~~~~l~~g~   95 (200)
                      .-.||.++..+.+|.
T Consensus       459 ~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  459 LRDLGLLLLALATGT  473 (655)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            889999999999985


No 462
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=94.84  E-value=0.018  Score=44.21  Aligned_cols=30  Identities=37%  Similarity=0.463  Sum_probs=26.6

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      ..+++|+|+++.|++++.++...|+||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            478999999999999988776789999876


No 463
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=94.82  E-value=0.018  Score=43.88  Aligned_cols=29  Identities=38%  Similarity=0.468  Sum_probs=25.9

Q ss_pred             CCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           15 RPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      .+++|+|++|.|++++.++.+.|+||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            57999999999999998777789999876


No 464
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=94.78  E-value=0.014  Score=42.43  Aligned_cols=31  Identities=35%  Similarity=0.394  Sum_probs=21.2

Q ss_pred             CCCeEeccCCCCCeEeC-CCCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLD-EFLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~-~~~~~~l~df~~~~   44 (200)
                      ..+++|+|+++.||+++ .++.+.|+||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccce
Confidence            56799999999999999 55556799998763


No 465
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=94.66  E-value=0.025  Score=46.55  Aligned_cols=34  Identities=24%  Similarity=0.326  Sum_probs=30.9

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccceeec
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQ   47 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~   47 (200)
                      ..|+.|.|.+|.|+++..+|.+.+.|||+.....
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            5799999999999999999999999999986654


No 466
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=94.59  E-value=0.034  Score=40.86  Aligned_cols=29  Identities=17%  Similarity=0.167  Sum_probs=25.1

Q ss_pred             CCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           15 RPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..++|+|++|.|++++..+ +.++||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            4579999999999999877 8899998763


No 467
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.42  E-value=0.031  Score=39.66  Aligned_cols=28  Identities=25%  Similarity=0.345  Sum_probs=24.2

Q ss_pred             CeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           16 PVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        16 gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..+|+|+.|.|+++..++ ++|+|++.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            469999999999998766 8899999873


No 468
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=94.27  E-value=0.032  Score=41.24  Aligned_cols=30  Identities=27%  Similarity=0.216  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      ...++|+|+.|.|++++..+...|+||+.+
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence            456899999999999998777789999876


No 469
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.26  E-value=0.033  Score=40.31  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=21.5

Q ss_pred             CCeEeccCCCCCeEe-CCCCCeeeccccccee
Q 047677           15 RPVIHRDVKSSNILL-DEFLKPRIADFGLARI   45 (200)
Q Consensus        15 ~gi~h~dlk~~nil~-~~~~~~~l~df~~~~~   45 (200)
                      ..++|+|+.+.||++ ..++.++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            468999999999999 7889999999988743


No 470
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=94.25  E-value=0.037  Score=41.29  Aligned_cols=29  Identities=21%  Similarity=0.301  Sum_probs=24.8

Q ss_pred             CCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           15 RPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..++|+|+.|.|++++.++ +.|+||+.+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            4689999999999998866 7899998763


No 471
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.23  E-value=0.037  Score=42.44  Aligned_cols=29  Identities=31%  Similarity=0.439  Sum_probs=25.3

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      ..+++|+|+++.|++++. +.+.|+||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            468999999999999987 67889999865


No 472
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.21  E-value=0.044  Score=40.16  Aligned_cols=37  Identities=24%  Similarity=0.321  Sum_probs=29.6

Q ss_pred             hhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeeccccc
Q 047677            5 GLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGL   42 (200)
Q Consensus         5 ~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~   42 (200)
                      +|.-.|.. +.+.+|+|.+|+||+-++.|-+||.|-+.
T Consensus       153 ~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  153 DLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhh
Confidence            44445543 35689999999999999999999999664


No 473
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=93.73  E-value=0.058  Score=38.63  Aligned_cols=31  Identities=23%  Similarity=0.255  Sum_probs=25.1

Q ss_pred             CCCeEeccCCCCCeEeCCCC-----Ceeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDEFL-----KPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~-----~~~l~df~~~~   44 (200)
                      ...++|||+.+.|+++..++     .+.++||..+.
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            46789999999999997543     57889998763


No 474
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=93.69  E-value=0.055  Score=40.86  Aligned_cols=30  Identities=23%  Similarity=0.240  Sum_probs=27.0

Q ss_pred             CCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           15 RPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      .-++|+|+.|.|++.+..+.++|+||..+.
T Consensus       153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             eeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            358999999999999999999999998763


No 475
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=92.79  E-value=0.063  Score=41.33  Aligned_cols=32  Identities=22%  Similarity=0.263  Sum_probs=27.9

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      ..|++|+|+.+.|++++.++.+.++||..+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            45899999999999999888899999987643


No 476
>PLN02236 choline kinase
Probab=92.69  E-value=0.1  Score=40.91  Aligned_cols=31  Identities=29%  Similarity=0.391  Sum_probs=26.2

Q ss_pred             CCCeEeccCCCCCeEeCC-CCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDE-FLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~-~~~~~l~df~~~~   44 (200)
                      ...++|+|+++.||+++. ++.+.++||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            457899999999999976 4679999998763


No 477
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=92.47  E-value=0.11  Score=39.44  Aligned_cols=32  Identities=25%  Similarity=0.480  Sum_probs=25.6

Q ss_pred             CCCeEeccCCCCCeEeCCCCC-eeeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFLK-PRIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~-~~l~df~~~~~   45 (200)
                      ...++|+|+++.|++++.++. ..|+||+.+..
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            356899999999999987454 46899988743


No 478
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=91.99  E-value=0.14  Score=39.89  Aligned_cols=27  Identities=33%  Similarity=0.555  Sum_probs=24.1

Q ss_pred             eEeccCCCCCeEeCCCCC-eeecccccc
Q 047677           17 VIHRDVKSSNILLDEFLK-PRIADFGLA   43 (200)
Q Consensus        17 i~h~dlk~~nil~~~~~~-~~l~df~~~   43 (200)
                      +||+|+.|.||+++.... +.++||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            999999999999998764 788999876


No 479
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=91.97  E-value=0.12  Score=42.61  Aligned_cols=82  Identities=20%  Similarity=0.250  Sum_probs=45.1

Q ss_pred             CccchhhHhHHHHHHHhCCCCCCCCCCCchhHHHHHHHhhcccchhhhhccCCCCCchHHHHHHHHHHHHHhcCCCCCCC
Q 047677           77 EKSDVYSFGVVLMELVTGKKPIEPEYGENKDIVRWVCSHFNSKQSVLTLVDSSIPETFKENAVEILRIAVLCTTTQPALR  156 (200)
Q Consensus        77 ~~~Di~slG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  156 (200)
                      +++|||++|.++.++.-|...+......  .....+.................  ....+....++++..+|+-..|..|
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s--~~l~~i~k~~~~d~~~~~~a~e~--~~~~~~d~~~~~~~~~c~~~~~~ir  185 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTES--EYLEILLKYYTDDQELLSTAMEH--LIQLLADKKRLPLLKKCLWLEPIIR  185 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHH--HHHHHHHHhccCchhHHHHHHHH--HHHHhhhHhHHHHhccCCccccccc
Confidence            6999999999999998887665432211  11111111111111111111000  1223334456788889999999988


Q ss_pred             CCHHHH
Q 047677          157 PTMRSV  162 (200)
Q Consensus       157 pt~~~i  162 (200)
                      |...+.
T Consensus       186 ~l~~~~  191 (725)
T KOG1093|consen  186 PLPMEL  191 (725)
T ss_pred             cchhHH
Confidence            865543


No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=91.40  E-value=0.2  Score=38.80  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=28.7

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccceee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARIV   46 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~   46 (200)
                      ...++|+|.++.|++++..+.+-|+||+.+...
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            457999999999999999888889999988553


No 481
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=91.36  E-value=0.17  Score=36.10  Aligned_cols=46  Identities=20%  Similarity=0.109  Sum_probs=36.3

Q ss_pred             ChhhhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceee
Q 047677            1 GAAKGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIV   46 (200)
Q Consensus         1 qi~~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~   46 (200)
                      |+++.+.+|++.....+.-.|++++|+.+..++.++++|...+...
T Consensus        67 ~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   67 QLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             HHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            3556677777544456899999999999999999999999876544


No 482
>PRK06148 hypothetical protein; Provisional
Probab=91.15  E-value=0.17  Score=45.50  Aligned_cols=32  Identities=38%  Similarity=0.426  Sum_probs=25.8

Q ss_pred             CCCeEeccCCCCCeEeCCCC--Ce-eeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFL--KP-RIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~--~~-~l~df~~~~~   45 (200)
                      ..++||+|+++.||+++.++  .+ -|+|||.+..
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            36799999999999998764  44 4899997743


No 483
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=91.12  E-value=0.24  Score=39.63  Aligned_cols=31  Identities=23%  Similarity=0.399  Sum_probs=26.1

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      ...++|||+++.||++..+ .++++|+..+..
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            5679999999999999775 688999987754


No 484
>PRK11768 serine/threonine protein kinase; Provisional
Probab=90.94  E-value=0.14  Score=39.81  Aligned_cols=29  Identities=31%  Similarity=0.360  Sum_probs=24.2

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~   44 (200)
                      ..+++|+|+.+.||++. + .+.++||+.+.
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            46789999999999995 3 57889999764


No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=90.83  E-value=0.22  Score=38.77  Aligned_cols=29  Identities=31%  Similarity=0.371  Sum_probs=24.8

Q ss_pred             CeEeccCCCCCeEeCC-CCCeeecccccce
Q 047677           16 PVIHRDVKSSNILLDE-FLKPRIADFGLAR   44 (200)
Q Consensus        16 gi~h~dlk~~nil~~~-~~~~~l~df~~~~   44 (200)
                      .++|+|+.+.||++.. .+.++++||..+.
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            4799999999999974 4689999998773


No 486
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=90.76  E-value=0.2  Score=39.00  Aligned_cols=30  Identities=27%  Similarity=0.316  Sum_probs=27.7

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccc
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLA   43 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~   43 (200)
                      .+|+||+|.+--||++..++.++++||-.+
T Consensus       220 ~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  220 NHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HcCceecccchheeEEecCCCEEEeechHh
Confidence            789999999999999999999999999654


No 487
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=90.48  E-value=0.14  Score=43.18  Aligned_cols=85  Identities=27%  Similarity=0.357  Sum_probs=60.9

Q ss_pred             hhhhhhhcCCCCCeEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccchhh
Q 047677            4 KGLEYLHHGCARPVIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYS   83 (200)
Q Consensus         4 ~~l~~Lh~~~~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~s   83 (200)
                      ++++++|   +.--+|+|    ||+.+. +..+..+|+....+....   ......+++.+++||+...+.+..+.|.|+
T Consensus       347 ~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~  415 (829)
T KOG0576|consen  347 RPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGS  415 (829)
T ss_pred             ccccccc---cccccCcc----cccccc-cccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccC
Confidence            5677888   44347777    555544 677888998875554322   233345789999999999999999999999


Q ss_pred             HhHHHHHHHhCCCCCC
Q 047677           84 FGVVLMELVTGKKPIE   99 (200)
Q Consensus        84 lG~~~~~l~~g~~pf~   99 (200)
                      +|.-..++.-|.+|-.
T Consensus       416 ~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  416 LAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCcchhhcCCCCCCCC
Confidence            9987777766766643


No 488
>PRK12396 5-methylribose kinase; Reviewed
Probab=90.32  E-value=0.24  Score=39.53  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=26.5

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeecccccceee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARIV   46 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~~   46 (200)
                      ...++|||++|.|||++.+ .++|+|...++..
T Consensus       226 ~~aLlHGDlHtGSI~v~~~-~~kvIDpEFAfyG  257 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKND-STKVIDPEFAFYG  257 (409)
T ss_pred             chhhccCcCCCCCEEecCC-ceEEEcccccccC
Confidence            5679999999999999874 6889998777553


No 489
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=90.17  E-value=0.32  Score=38.32  Aligned_cols=31  Identities=26%  Similarity=0.450  Sum_probs=25.7

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      ...++|||+.+.||++... .++++|+..+..
T Consensus       191 ~~~llHGDl~~gNi~~~~~-~~~~iD~e~~~~  221 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEH-ETKVIDPEFAFY  221 (370)
T ss_pred             cceeeeccCCcccEEEcCC-CCEEEcCccccc
Confidence            5679999999999999774 477899887654


No 490
>PRK06149 hypothetical protein; Provisional
Probab=87.99  E-value=0.32  Score=43.59  Aligned_cols=31  Identities=19%  Similarity=0.299  Sum_probs=24.9

Q ss_pred             CCCeEeccCCCCCeEeCCCC--C---eeecccccce
Q 047677           14 ARPVIHRDVKSSNILLDEFL--K---PRIADFGLAR   44 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~--~---~~l~df~~~~   44 (200)
                      ..|+||+|+++.||+++.+.  .   ..|+|||.+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            57899999999999998642  3   3689999763


No 491
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=87.53  E-value=0.058  Score=49.91  Aligned_cols=79  Identities=13%  Similarity=0.073  Sum_probs=58.2

Q ss_pred             eEeccCCCCCeEeCCCCCeeecccccceeeccCCCcceeeeecccccccccccccCCCCCCccchhhHhHHHHHHHhCCC
Q 047677           17 VIHRDVKSSNILLDEFLKPRIADFGLARIVQSNGGKDTTHVIAGTTGYIAPEYGYTSKVDEKSDVYSFGVVLMELVTGKK   96 (200)
Q Consensus        17 i~h~dlk~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~~~~l~~g~~   96 (200)
                      -+|+++|+.|.+|..+..++++++|+.+...  ......+...+++.|+.++....-.++.++|+|..|+..|..-.|-.
T Consensus      1361 ~v~~~Lkf~lpmIVtny~v~~gk~gLdKIkn--p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYNVKLGKGGLDKIKN--PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred             chhhhhhhhccceecCCcccccccccccccC--chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence            5899999999999999999999999986221  11222333456777888877666667777999999998887655544


Q ss_pred             C
Q 047677           97 P   97 (200)
Q Consensus        97 p   97 (200)
                      +
T Consensus      1439 ~ 1439 (2724)
T KOG1826|consen 1439 Y 1439 (2724)
T ss_pred             H
Confidence            3


No 492
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=87.04  E-value=0.55  Score=39.03  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=28.6

Q ss_pred             CCCeEeccCCCCCeEeCC----CCCeeecccccceeec
Q 047677           14 ARPVIHRDVKSSNILLDE----FLKPRIADFGLARIVQ   47 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~----~~~~~l~df~~~~~~~   47 (200)
                      ..|++|+|-+|.||++.+    ++.+.+.|||+.....
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            578999999999999984    5678889999976554


No 493
>PLN02756 S-methyl-5-thioribose kinase
Probab=86.31  E-value=0.77  Score=36.94  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=25.2

Q ss_pred             CCCeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677           14 ARPVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus        14 ~~gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      ...++|||+++.||++..++ .+++|...+..
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~  259 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAFY  259 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhcc
Confidence            56799999999999998864 78888766544


No 494
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=86.11  E-value=0.43  Score=36.31  Aligned_cols=30  Identities=33%  Similarity=0.347  Sum_probs=23.6

Q ss_pred             CCeEeccCCCCCeEeCCC--C---Ceeecccccce
Q 047677           15 RPVIHRDVKSSNILLDEF--L---KPRIADFGLAR   44 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~--~---~~~l~df~~~~   44 (200)
                      .-++|||++..|+++..+  |   .++++||..+.
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             eEEEcCccCHHhEeEccccccccccceeecccccc
Confidence            458999999999999654  3   57888987653


No 495
>PHA03111 Ser/Thr kinase; Provisional
Probab=85.34  E-value=1  Score=35.32  Aligned_cols=21  Identities=33%  Similarity=0.583  Sum_probs=16.9

Q ss_pred             CCCCCeEeccCCCCCeEeCCC
Q 047677           12 GCARPVIHRDVKSSNILLDEF   32 (200)
Q Consensus        12 ~~~~gi~h~dlk~~nil~~~~   32 (200)
                      .+..+.+|.||||.||++=++
T Consensus       299 p~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        299 PCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             CCcceeeeccCCCCcEEEecC
Confidence            335679999999999999443


No 496
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=83.26  E-value=1.3  Score=34.80  Aligned_cols=19  Identities=37%  Similarity=0.723  Sum_probs=16.0

Q ss_pred             CCCCeEeccCCCCCeEeCC
Q 047677           13 CARPVIHRDVKSSNILLDE   31 (200)
Q Consensus        13 ~~~gi~h~dlk~~nil~~~   31 (200)
                      +..+.+|.||||.|||+=+
T Consensus       296 ~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  296 CCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             CcceeeecccCcCcEEEec
Confidence            3567999999999999943


No 497
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=82.05  E-value=1.1  Score=32.17  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=23.8

Q ss_pred             hhhhcCCCCCeEeccCCCCCeEeCCC--C--Ceeecc-ccc
Q 047677            7 EYLHHGCARPVIHRDVKSSNILLDEF--L--KPRIAD-FGL   42 (200)
Q Consensus         7 ~~Lh~~~~~gi~h~dlk~~nil~~~~--~--~~~l~d-f~~   42 (200)
                      .||-   .+.|+.+|++|.||++...  +  .+.|+| ||.
T Consensus       132 ~~l~---~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  132 RYLL---DHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             HHHH---HcCCeecCCCcccEEEEecCCCceEEEEEeCCCC
Confidence            4555   6789999999999999543  2  466777 444


No 498
>PLN02876 acyl-CoA dehydrogenase
Probab=79.35  E-value=2  Score=38.03  Aligned_cols=31  Identities=19%  Similarity=0.350  Sum_probs=24.2

Q ss_pred             CCeEeccCCCCCeEeCCC-C-Ceeeccccccee
Q 047677           15 RPVIHRDVKSSNILLDEF-L-KPRIADFGLARI   45 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~-~-~~~l~df~~~~~   45 (200)
                      ..++|+|+++.|+++... + ..-|.|++.+..
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            469999999999999753 2 346889987654


No 499
>PRK10593 hypothetical protein; Provisional
Probab=79.27  E-value=1.9  Score=33.05  Aligned_cols=27  Identities=15%  Similarity=0.165  Sum_probs=21.0

Q ss_pred             CCeEeccCCCCCeEeCCC-CC-eeecccc
Q 047677           15 RPVIHRDVKSSNILLDEF-LK-PRIADFG   41 (200)
Q Consensus        15 ~gi~h~dlk~~nil~~~~-~~-~~l~df~   41 (200)
                      ..++|||+++.||+++.. +. +.++|..
T Consensus       193 psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        193 CVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CeeEeCCCCcccEEECCCCCceEEEECch
Confidence            468999999999999864 33 5667755


No 500
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=78.80  E-value=1.4  Score=35.07  Aligned_cols=29  Identities=38%  Similarity=0.612  Sum_probs=26.4

Q ss_pred             CeEeccCCCCCeEeCCCCCeeeccccccee
Q 047677           16 PVIHRDVKSSNILLDEFLKPRIADFGLARI   45 (200)
Q Consensus        16 gi~h~dlk~~nil~~~~~~~~l~df~~~~~   45 (200)
                      .+-||++.-.||+|+ .|++.|+||-+++.
T Consensus       342 ~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         342 PFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             Ccccccccccceeee-cCceEEEEeeeeec
Confidence            568999999999999 89999999999873


Done!