Query 047678
Match_columns 136
No_of_seqs 223 out of 1690
Neff 8.9
Searched_HMMs 29240
Date Tue Mar 26 00:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.5 9.4E-14 3.2E-18 81.3 7.6 66 3-71 2-67 (68)
2 3dxs_X Copper-transporting ATP 99.5 5.7E-13 1.9E-17 78.8 9.3 68 3-70 2-71 (74)
3 4a4j_A Pacszia, cation-transpo 99.4 1.4E-12 4.7E-17 76.1 9.9 67 3-69 2-69 (69)
4 1cc8_A Protein (metallochapero 99.4 2.4E-12 8.3E-17 76.0 9.3 67 2-70 4-71 (73)
5 3fry_A Probable copper-exporti 99.4 1.8E-12 6.3E-17 76.7 7.7 67 2-71 4-70 (73)
6 2xmw_A PACS-N, cation-transpor 99.4 9E-12 3.1E-16 72.2 9.2 68 1-68 1-69 (71)
7 2xmm_A SSR2857 protein, ATX1; 99.3 2.4E-11 8.3E-16 68.9 7.3 63 4-67 2-64 (64)
8 2crl_A Copper chaperone for su 99.3 3.8E-11 1.3E-15 75.3 8.6 68 3-72 19-86 (98)
9 1mwy_A ZNTA; open-faced beta-s 99.3 9.7E-11 3.3E-15 68.5 9.9 67 3-69 3-69 (73)
10 1osd_A MERP, hypothetical prot 99.3 1E-10 3.4E-15 67.9 9.8 67 3-69 3-71 (72)
11 1aw0_A Menkes copper-transport 99.2 6.6E-11 2.2E-15 68.7 8.7 67 3-69 3-71 (72)
12 2l3m_A Copper-ION-binding prot 99.2 1.1E-10 3.8E-15 67.6 9.4 64 3-66 5-70 (71)
13 3cjk_B Copper-transporting ATP 99.2 1.5E-10 5E-15 68.0 9.8 67 3-69 2-70 (75)
14 1q8l_A Copper-transporting ATP 99.2 9.5E-11 3.2E-15 70.8 8.8 70 3-72 9-80 (84)
15 2qif_A Copper chaperone COPZ; 99.2 2.3E-10 7.7E-15 65.3 9.8 64 3-66 2-67 (69)
16 2g9o_A Copper-transporting ATP 99.2 1.3E-10 4.4E-15 71.4 9.0 70 3-72 3-77 (90)
17 2roe_A Heavy metal binding pro 99.2 3.2E-11 1.1E-15 69.4 5.8 63 6-69 3-65 (66)
18 2k2p_A Uncharacterized protein 99.2 7.5E-11 2.6E-15 72.0 7.4 63 3-66 22-84 (85)
19 1fvq_A Copper-transporting ATP 99.2 1.4E-10 4.8E-15 67.3 8.1 68 3-70 2-70 (72)
20 1yg0_A COP associated protein; 99.2 2.3E-10 7.7E-15 65.2 8.7 63 4-66 2-65 (66)
21 2kt2_A Mercuric reductase; nme 99.2 1.2E-10 4E-15 67.2 7.4 64 6-69 3-67 (69)
22 1cpz_A Protein (COPZ); copper 99.2 2E-10 6.7E-15 65.8 8.3 63 6-68 3-67 (68)
23 1opz_A Potential copper-transp 99.2 3.4E-10 1.2E-14 66.1 9.4 67 3-69 6-74 (76)
24 1y3j_A Copper-transporting ATP 99.2 7.5E-11 2.6E-15 69.7 6.4 68 3-70 3-72 (77)
25 1kvi_A Copper-transporting ATP 99.2 2.1E-10 7.3E-15 68.0 8.3 68 3-70 8-77 (79)
26 1jww_A Potential copper-transp 99.1 2.7E-10 9.4E-15 67.4 8.1 69 3-71 3-73 (80)
27 2aj0_A Probable cadmium-transp 99.1 2.6E-10 8.8E-15 66.4 7.3 64 1-69 1-64 (71)
28 2kyz_A Heavy metal binding pro 99.1 1.7E-10 5.9E-15 66.5 6.2 62 5-69 3-64 (67)
29 1yjr_A Copper-transporting ATP 99.1 4.6E-10 1.6E-14 65.5 7.8 66 3-68 4-71 (75)
30 2ldi_A Zinc-transporting ATPas 99.1 4.3E-10 1.5E-14 64.6 7.5 65 3-67 3-69 (71)
31 2ew9_A Copper-transporting ATP 99.1 6.8E-10 2.3E-14 73.4 8.8 67 3-69 80-148 (149)
32 2ofg_X Zinc-transporting ATPas 99.1 1E-09 3.5E-14 70.0 9.4 66 3-68 8-75 (111)
33 2kkh_A Putative heavy metal tr 99.1 2.2E-09 7.5E-14 66.2 9.9 70 3-72 16-87 (95)
34 1p6t_A Potential copper-transp 99.0 1.4E-09 4.9E-14 72.1 8.9 69 3-71 74-144 (151)
35 1qup_A Superoxide dismutase 1 99.0 3.4E-09 1.2E-13 75.7 9.8 69 3-73 6-74 (222)
36 2rop_A Copper-transporting ATP 99.0 5.6E-09 1.9E-13 72.9 9.8 69 4-72 123-193 (202)
37 2ew9_A Copper-transporting ATP 98.9 1.4E-08 4.8E-13 66.9 8.6 68 3-70 4-73 (149)
38 1jk9_B CCS, copper chaperone f 98.8 1.4E-08 4.7E-13 73.7 8.6 67 3-71 7-73 (249)
39 1p6t_A Potential copper-transp 98.6 3.6E-07 1.2E-11 60.3 9.2 64 3-66 6-71 (151)
40 3j09_A COPA, copper-exporting 98.6 2.7E-07 9.2E-12 75.8 9.8 66 4-69 3-70 (723)
41 2rop_A Copper-transporting ATP 98.5 3.7E-07 1.3E-11 63.6 7.1 60 3-62 20-81 (202)
42 1jdq_A TM006 protein, hypothet 88.4 2.6 8.9E-05 25.6 6.7 57 5-70 27-84 (98)
43 2x3d_A SSO6206; unknown functi 85.9 3.3 0.00011 25.1 6.0 52 19-70 21-79 (96)
44 3bpd_A Uncharacterized protein 85.4 1.9 6.5E-05 26.4 4.7 52 19-70 22-80 (100)
45 2raq_A Conserved protein MTH88 84.0 2.9 9.9E-05 25.5 5.1 52 19-70 22-80 (97)
46 3lvj_C Sulfurtransferase TUSA; 83.5 4.8 0.00016 23.4 6.4 57 4-69 10-67 (82)
47 1je3_A EC005, hypothetical 8.6 83.2 2.3 7.7E-05 25.9 4.5 57 4-69 27-84 (97)
48 3hz7_A Uncharacterized protein 80.5 6.6 0.00023 23.2 5.9 56 6-69 3-59 (87)
49 4gwb_A Peptide methionine sulf 72.0 19 0.00066 24.1 8.1 55 1-61 1-72 (168)
50 1pav_A Hypothetical protein TA 71.8 4.4 0.00015 23.2 3.3 55 6-69 8-63 (78)
51 2jsx_A Protein NAPD; TAT, proo 70.0 15 0.00052 22.0 6.7 48 15-62 16-63 (95)
52 3cq1_A Putative uncharacterize 65.9 12 0.00041 22.5 4.6 34 5-39 43-82 (103)
53 1uwd_A Hypothetical protein TM 60.0 17 0.00058 21.8 4.5 22 18-39 62-83 (103)
54 1fvg_A Peptide methionine sulf 48.2 55 0.0019 22.5 5.9 47 15-61 50-117 (199)
55 3lno_A Putative uncharacterize 47.1 22 0.00076 21.6 3.5 23 18-40 64-87 (108)
56 3bqh_A PILB, peptide methionin 42.4 75 0.0026 21.7 5.8 47 15-61 9-76 (193)
57 2j89_A Methionine sulfoxide re 40.8 78 0.0027 22.7 5.9 48 15-62 101-169 (261)
58 1ff3_A Peptide methionine sulf 38.0 96 0.0033 21.5 5.9 47 15-61 49-116 (211)
59 2lqo_A Putative glutaredoxin R 35.5 50 0.0017 19.3 3.7 33 3-38 4-36 (92)
60 1nwa_A Peptide methionine sulf 34.7 1.1E+02 0.0038 21.0 6.3 47 15-61 32-95 (203)
61 3e0m_A Peptide methionine sulf 30.4 1.3E+02 0.0046 22.1 5.8 47 15-61 9-74 (313)
62 1t1v_A SH3BGRL3, SH3 domain-bi 30.4 70 0.0024 18.2 3.7 34 1-37 1-39 (93)
63 3rdw_A Putative arsenate reduc 27.8 1.1E+02 0.0037 18.7 5.7 47 11-66 12-59 (121)
64 2k1h_A Uncharacterized protein 27.0 1E+02 0.0036 18.3 6.2 40 21-62 41-81 (94)
65 3gkx_A Putative ARSC family re 26.6 1.1E+02 0.0039 18.6 5.8 48 11-67 11-58 (120)
66 2khp_A Glutaredoxin; thioredox 26.3 90 0.0031 17.3 4.2 23 4-28 7-29 (92)
67 1owx_A Lupus LA protein, SS-B, 24.4 1.3E+02 0.0045 18.6 6.1 56 5-62 19-76 (121)
68 1s3c_A Arsenate reductase; ARS 23.6 1.2E+02 0.0041 19.1 4.2 46 11-65 9-54 (141)
69 1pqx_A Conserved hypothetical 22.9 1E+02 0.0035 18.2 3.4 44 16-62 37-81 (91)
70 3fz4_A Putative arsenate reduc 22.0 1.4E+02 0.0049 18.1 6.1 48 11-67 10-57 (120)
71 1okg_A Possible 3-mercaptopyru 20.3 38 0.0013 25.3 1.4 41 5-45 322-362 (373)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.50 E-value=9.4e-14 Score=81.35 Aligned_cols=66 Identities=27% Similarity=0.491 Sum_probs=61.5
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWPF 71 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~~ 71 (136)
++..|+| ||+|.+|+.+|+++|++++|| ++.+|+..++++|.+. .+.+.+.+.|++.||.+++|..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE-HSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES-SCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec-CCHHHHHHHHHHcCCceEecCC
Confidence 5678999 999999999999999999999 9999999999999986 8999999999999999988753
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.46 E-value=5.7e-13 Score=78.84 Aligned_cols=68 Identities=22% Similarity=0.378 Sum_probs=62.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~ 70 (136)
+++.|+|+||+|.+|+.+|+++|++++||..+.+++..++++|..+. ++.+.+.+.|++.||.++++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 66889999999999999999999999999999999999999998643 688999999999999987764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.44 E-value=1.4e-12 Score=76.08 Aligned_cols=67 Identities=24% Similarity=0.455 Sum_probs=60.9
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEec-CCCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGY-ALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~-~~~~~~v~~~l~~~g~~~~~~ 69 (136)
+++.|+|+||+|.+|+.+|+++|.+++||..+.+++..++++|... ..+.+.+.+.|++.||.++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 5788999999999999999999999999999999999999999852 278999999999999987653
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.41 E-value=2.4e-12 Score=76.02 Aligned_cols=67 Identities=27% Similarity=0.444 Sum_probs=61.6
Q ss_pred ceEEEEEecCCCChhHHHHHHHHHhCCC-CeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCC
Q 047678 2 QLMVEVRVPNLDCEGCASKCKRALFKLK-GVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 2 ~~~v~~~v~~m~C~~C~~~v~~~l~~~~-gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~ 70 (136)
+++..|+|. |+|.+|+.+|+++|.+++ ||.++.+|+..++++|.+. .+.+.+.+.|++.|+.+++|.
T Consensus 4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT-LPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES-SCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHHHhCCCceeee
Confidence 367889998 999999999999999999 9999999999999999985 789999999999999987764
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.39 E-value=1.8e-12 Score=76.71 Aligned_cols=67 Identities=21% Similarity=0.346 Sum_probs=61.6
Q ss_pred ceEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCCC
Q 047678 2 QLMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWPF 71 (136)
Q Consensus 2 ~~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~~ 71 (136)
++++.|+|.||+|.+|+.+|+++|++ +||..+.+++..++++|..+ +.+.+.+.|++.||.+++++.
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~--~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE--DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG--GHHHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC--CHHHHHHHHHHcCCceEecCc
Confidence 36788999999999999999999999 99999999999999999876 888999999999999888763
No 6
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.35 E-value=9e-12 Score=72.17 Aligned_cols=68 Identities=24% Similarity=0.451 Sum_probs=59.1
Q ss_pred CceEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCccccc
Q 047678 1 MQLMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEP 68 (136)
Q Consensus 1 ~~~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~ 68 (136)
|+++..|++.||+|.+|+.+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.|...|+.+.+
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 6788899999999999999999999999999999999999999988642 5678888999999987654
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.26 E-value=2.4e-11 Score=68.91 Aligned_cols=63 Identities=27% Similarity=0.537 Sum_probs=57.0
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccc
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAE 67 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~ 67 (136)
+..|++.||+|.+|..+++++|.+++||..+.+++..+++.+.+. .+.+.+.+.|.+.|+.++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~~~G~~~~ 64 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA-LGEEQLRTAIASAGYEVE 64 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS-SCHHHHHHHHHHTTCCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec-CCHHHHHHHHHHcCCCCC
Confidence 356999999999999999999999999999999999999999865 788889999999998753
No 8
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=3.8e-11 Score=75.25 Aligned_cols=68 Identities=24% Similarity=0.428 Sum_probs=62.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWPFP 72 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~~~ 72 (136)
.++.|+|. |+|.+|+.+|+++|.+++||..+.+++..++++|.+. .+.+.+.+.|+++||.+.+|...
T Consensus 19 ~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~-~~~~~i~~~i~~~Gy~~~~~~~~ 86 (98)
T 2crl_A 19 CTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT-LPSQEVQALLEGTGRQAVLKGMG 86 (98)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES-SCHHHHHHHHHTTTSCEEEEESC
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHHHhCCceEEccCC
Confidence 45789998 9999999999999999999999999999999999986 78899999999999998887644
No 9
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.25 E-value=9.7e-11 Score=68.55 Aligned_cols=67 Identities=25% Similarity=0.390 Sum_probs=58.4
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~ 69 (136)
+++.|+|.||+|.+|..+|+++|.+++||..+.+++..+++.|..+....+.+.+.|...||.+...
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 5678999999999999999999999999999999999999999875333677888899999976543
No 10
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.25 E-value=1e-10 Score=67.90 Aligned_cols=67 Identities=27% Similarity=0.431 Sum_probs=59.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
+++.|++.||+|.+|..+|+++|.+++||..+.+++..+++.+..+. .+.+.+.+.|...|+.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 45789999999999999999999999999999999999999987642 57788999999999987553
No 11
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.24 E-value=6.6e-11 Score=68.70 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=59.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
++..|+|.||+|.+|+.+++++|.+++||..+.+++..+++.+..+. ...+.+.+.|.+.|+.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 56789999999999999999999999999999999999999998653 56788999999999976543
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.24 E-value=1.1e-10 Score=67.60 Aligned_cols=64 Identities=19% Similarity=0.395 Sum_probs=57.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAA 66 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~ 66 (136)
.+..|+|.||.|.+|..+|+++|.+++||..+.+++..+++.+..+. .+.+.+.+.|.+.|+.+
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 46789999999999999999999999999999999999999987542 67888999999999865
No 13
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.23 E-value=1.5e-10 Score=67.98 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=59.4
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
.++.|++.||+|.+|+.+|+++|.+++||..+.+++..+++.+..+. .+.+.+.+.|...|+.+.+.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence 45789999999999999999999999999999999999999998642 57788999999999987654
No 14
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.22 E-value=9.5e-11 Score=70.78 Aligned_cols=70 Identities=21% Similarity=0.402 Sum_probs=61.9
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWPFP 72 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~~~ 72 (136)
.++.|+|.||+|.+|+.+|+++|.+++||..+.+++..+++.|..+. ++.+.+.+.|...|+.+.++..+
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP 80 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence 45789999999999999999999999999999999999999998642 57888999999999988776644
No 15
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.21 E-value=2.3e-10 Score=65.26 Aligned_cols=64 Identities=23% Similarity=0.403 Sum_probs=56.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAA 66 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~ 66 (136)
....|++.||+|.+|..+++++|..++||..+.+++..+++.+..+. .+.+.+.+.+...|+.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 45679999999999999999999999999999999999999987642 57788889999999864
No 16
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.20 E-value=1.3e-10 Score=71.42 Aligned_cols=70 Identities=17% Similarity=0.178 Sum_probs=61.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHh---CcccccCCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRA---GKAAEPWPFP 72 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~---g~~~~~~~~~ 72 (136)
+++.|+|.||.|.+|+.+|+++|.+++||..+.+++..++++|..+. ++.+.+.+.|..+ ||++.++...
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 45679999999999999999999999999999999999999998642 5678899999999 5888777654
No 17
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.20 E-value=3.2e-11 Score=69.40 Aligned_cols=63 Identities=32% Similarity=0.556 Sum_probs=56.4
Q ss_pred EEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccC
Q 047678 6 EVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 6 ~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~ 69 (136)
.|++.||+|.+|+.+++++|.+++||..+.+++..+++++.+. .+.+.+.+.|.+.||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGT-ADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSC-CCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCC-CCHHHHHHHHHHcCCCcEec
Confidence 5889999999999999999999999999999999999999543 78899999999999977543
No 18
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.19 E-value=7.5e-11 Score=72.00 Aligned_cols=63 Identities=22% Similarity=0.302 Sum_probs=58.0
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAA 66 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~ 66 (136)
.+..|+|.||.|.+|+.+|+++|.+++||..+.+++..++++|... ++.+.+.+.|..+||.+
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~-~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV-SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC-CCHHHHHHHHHHTTCCC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec-CCHHHHHHHHHHcCCCC
Confidence 4567999999999999999999999999999999999999999876 78899999999999865
No 19
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.18 E-value=1.4e-10 Score=67.28 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=59.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCcccccCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~~~ 70 (136)
++..|++.||+|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+.+.|+.++++.
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 35679999999999999999999999999999999999999987542 577889999999999887664
No 20
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.18 E-value=2.3e-10 Score=65.17 Aligned_cols=63 Identities=21% Similarity=0.423 Sum_probs=55.8
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCccc
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAA 66 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~ 66 (136)
+..|++.||.|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+.+.|+.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 4568999999999999999999999999999999999999998643 46788888999999864
No 21
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.18 E-value=1.2e-10 Score=67.21 Aligned_cols=64 Identities=19% Similarity=0.307 Sum_probs=56.9
Q ss_pred EEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCcccccC
Q 047678 6 EVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 6 ~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~~ 69 (136)
.|++.||+|.+|+.+|+++|.+++||..+.+++..+++.+..+. ...+.+.+.+.++|+.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 48889999999999999999999999999999999999987643 57788999999999987654
No 22
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.18 E-value=2e-10 Score=65.82 Aligned_cols=63 Identities=24% Similarity=0.476 Sum_probs=56.4
Q ss_pred EEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccccc
Q 047678 6 EVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEP 68 (136)
Q Consensus 6 ~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~ 68 (136)
.|++.||+|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+.+.|+.+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 58899999999999999999999999999999999999998642 5778899999999997654
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.17 E-value=3.4e-10 Score=66.11 Aligned_cols=67 Identities=15% Similarity=0.349 Sum_probs=59.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
.+..|+|.||+|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+...|+.+.++
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 45679999999999999999999999999999999999999987542 57888899999999987654
No 24
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.17 E-value=7.5e-11 Score=69.73 Aligned_cols=68 Identities=18% Similarity=0.308 Sum_probs=60.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~ 70 (136)
+++.|+|.||+|.+|+.+|+++|.+++||..+.+++..+++.+..+. .+.+.+.+.|...|+.+.++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 56789999999999999999999999999999999999999988642 567888999999999876653
No 25
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.16 E-value=2.1e-10 Score=68.00 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=59.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~ 70 (136)
.++.|++.||+|.+|+.+|+++|.+++||..+.+++..+++.+..+. .+.+.+.+.|...|+.+.+..
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 45789999999999999999999999999999999999999998642 567889999999999876543
No 26
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.14 E-value=2.7e-10 Score=67.42 Aligned_cols=69 Identities=17% Similarity=0.330 Sum_probs=60.5
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWPF 71 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~~ 71 (136)
.+..|+|.||+|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+...|+.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 56789999999999999999999999999999999999999987542 5778889999999998777653
No 27
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.13 E-value=2.6e-10 Score=66.42 Aligned_cols=64 Identities=30% Similarity=0.473 Sum_probs=54.6
Q ss_pred CceEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccC
Q 047678 1 MQLMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 1 ~~~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~ 69 (136)
|+++..|.|.||+|.+|..+|+++|.+++||..+.+++..+++.|.+. .. .+.|..+|+.+.+.
T Consensus 1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~-~~----~~~i~~~Gy~~~~~ 64 (71)
T 2aj0_A 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGE-AS----IQQVEQAGAFEHLK 64 (71)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEES-CC----HHHHHHHHTTTTCE
T ss_pred CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEec-Cc----HHHHHHhCCCcccc
Confidence 667788999999999999999999999999999999999999999876 33 34667888765443
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.12 E-value=1.7e-10 Score=66.49 Aligned_cols=62 Identities=27% Similarity=0.480 Sum_probs=55.3
Q ss_pred EEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccC
Q 047678 5 VEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 5 v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~ 69 (136)
..|++.||+|.+|+.+++++|.++ ||..+.+++..+++++..+ .. +.+.+.+.+.|+.+...
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~-~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECS-CH-HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEEC-CH-HHHHHHHHHcCCceeeE
Confidence 569999999999999999999999 9999999999999999876 34 78888999999976554
No 29
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.10 E-value=4.6e-10 Score=65.54 Aligned_cols=66 Identities=17% Similarity=0.364 Sum_probs=57.5
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEP 68 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~ 68 (136)
.++.|++.||+|.+|+.+++++|.+++||..+.+++..+++.+..+. ...+.+.+.+...|+.+.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 45779999999999999999999999999999999999999998652 4567788889999987654
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.10 E-value=4.3e-10 Score=64.60 Aligned_cols=65 Identities=28% Similarity=0.435 Sum_probs=56.9
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAE 67 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~ 67 (136)
++..|++.||+|.+|..+++++|.+++||..+.+++..+++.+..+. .+.+.+.+.+...|+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 45679999999999999999999999999999999999999987642 567788888999998654
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.08 E-value=6.8e-10 Score=73.35 Aligned_cols=67 Identities=16% Similarity=0.332 Sum_probs=59.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
.++.|+|.||.|.+|+.+|+++|.+++||..+.+++..+++.|..+. ++.+.+.+.|.+.||.++++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 35679999999999999999999999999999999999999998653 57888999999999987654
No 32
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.08 E-value=1e-09 Score=69.97 Aligned_cols=66 Identities=24% Similarity=0.395 Sum_probs=58.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEP 68 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~ 68 (136)
+++.|+|.+|.|..|+.+|+++|.+++||..+.+++..+++.|..+. ++.+.+.+.|..+||.+..
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 45789999999999999999999999999999999999999998652 5678899999999997654
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.06 E-value=2.2e-09 Score=66.23 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=61.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWPFP 72 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~~~ 72 (136)
.+..|.|.||+|.+|..+|+++|..++||..+.+++..+.+.|..+. +....+...|..+|+.+.++...
T Consensus 16 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG 87 (95)
T ss_dssp EEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred EEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence 45789999999999999999999999999999999999999998643 56788899999999988776543
No 34
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.04 E-value=1.4e-09 Score=72.10 Aligned_cols=69 Identities=17% Similarity=0.330 Sum_probs=61.3
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWPF 71 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~~ 71 (136)
.++.|+|.||+|.+|+.+|+++|.+++||..+.+++..+++.|..+. ++.+.+.+.|.++||.+.++..
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 34679999999999999999999999999999999999999998642 6789999999999998877653
No 35
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.99 E-value=3.4e-09 Score=75.69 Aligned_cols=69 Identities=19% Similarity=0.413 Sum_probs=62.5
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCCCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWPFPG 73 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~~~~ 73 (136)
.+++|+|+ |+|.+|+.+|+++|++++||.++.+++..++++|... .+.+.+.+.|+++|+.+.++....
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aI~~~Gy~a~~~~~~~ 74 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLRNCGKDAIIRGAGK 74 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHHHTTCCCEEECCSC
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc-CCHHHHHHHHHHcCCccccccCCC
Confidence 45689998 9999999999999999999999999999999999876 788999999999999988876543
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.96 E-value=5.6e-09 Score=72.88 Aligned_cols=69 Identities=16% Similarity=0.298 Sum_probs=60.0
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCCCC
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWPFP 72 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~~~ 72 (136)
++.|+|.||+|.+|+.+|+++|.+++||..+.+++..+++.|..+. ++.+.+.+.|..+||.+.++...
T Consensus 123 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 123 TTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193 (202)
T ss_dssp EEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence 4679999999999999999999999999999999999999998642 57888999999999988776543
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-08 Score=66.90 Aligned_cols=68 Identities=19% Similarity=0.281 Sum_probs=59.6
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~~ 70 (136)
+++.|.|.||+|.+|+.+++++|.+++||..+.+++..+++.+..+. ...+.+.+.+...|+.+.+..
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 66889999999999999999999999999999999999999987642 567889999999999876543
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.84 E-value=1.4e-08 Score=73.68 Aligned_cols=67 Identities=19% Similarity=0.439 Sum_probs=60.9
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccccCCC
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAEPWPF 71 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~~~~~ 71 (136)
.+++|+|+ |+|.+|+.+|+++|++++||..+.+++..++++|... .+.+.+.+.|+++||.+.++..
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHHTTTCCCEEEEE
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC-CCHHHHHHHHHHhCCCcccccC
Confidence 35789998 9999999999999999999999999999999999876 7889999999999999877654
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.60 E-value=3.6e-07 Score=60.30 Aligned_cols=64 Identities=16% Similarity=0.411 Sum_probs=55.3
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCccc
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAA 66 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~ 66 (136)
++..|.|.||+|.+|..++++.|.+++||..+.+++..+++.+..+. .+...+.+.+...|+.+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 45679999999999999999999999999999999999998887542 56778888888888854
No 40
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.58 E-value=2.7e-07 Score=75.85 Aligned_cols=66 Identities=24% Similarity=0.363 Sum_probs=59.5
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHhCcccccC
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~g~~~~~~ 69 (136)
+++++|+||+|.+|+.+++++|++++||.++++++..++++|+.+. .+.+++.+.+.+.|+++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 4679999999999999999999999999999999999999998642 68899999999999987544
No 41
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.49 E-value=3.7e-07 Score=63.55 Aligned_cols=60 Identities=17% Similarity=0.400 Sum_probs=53.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC--CCHHHHHHHHHHh
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA--LDEKKVLKAIKRA 62 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~--~~~~~v~~~l~~~ 62 (136)
.++.|+|.||+|.+|+.+|+++|.+++||..+.+++..+++.|..+. .....+.+.|...
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 45679999999999999999999999999999999999999998642 5678888888877
No 42
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=88.36 E-value=2.6 Score=25.61 Aligned_cols=57 Identities=18% Similarity=0.175 Sum_probs=41.4
Q ss_pred EEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCcccccCC
Q 047678 5 VEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 5 v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~~~ 70 (136)
.++.+.|+.|+.-..+++++|.++.. .+.+.|..+. .....|.+.+++.|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 56888899999999999999998732 2344444332 346778888899998765543
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=85.86 E-value=3.3 Score=25.13 Aligned_cols=52 Identities=25% Similarity=0.341 Sum_probs=38.2
Q ss_pred HHHHHHHhCCCCeeEEEEecc-----Cc--EEEEEecCCCHHHHHHHHHHhCcccccCC
Q 047678 19 SKCKRALFKLKGVEEVEIEME-----VQ--KITVRGYALDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 19 ~~v~~~l~~~~gv~~v~vd~~-----~~--~v~V~~~~~~~~~v~~~l~~~g~~~~~~~ 70 (136)
-.+-+.|.+++||..+++... +. ++++.|..++.+.+.+.|.+.|.....+.
T Consensus 21 vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSID 79 (96)
T 2x3d_A 21 VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSID 79 (96)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 356678899999988876543 33 44556766999999999999997655443
No 44
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=85.37 E-value=1.9 Score=26.37 Aligned_cols=52 Identities=25% Similarity=0.323 Sum_probs=38.4
Q ss_pred HHHHHHHhCCCCeeEEEEecc-----Cc--EEEEEecCCCHHHHHHHHHHhCcccccCC
Q 047678 19 SKCKRALFKLKGVEEVEIEME-----VQ--KITVRGYALDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 19 ~~v~~~l~~~~gv~~v~vd~~-----~~--~v~V~~~~~~~~~v~~~l~~~g~~~~~~~ 70 (136)
-.+-+.|.+++||..+++... +. ++++.|..++.+.+.+.|.+.|.....+.
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 456678899999988876543 33 34556766899999999999998665554
No 45
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=83.98 E-value=2.9 Score=25.45 Aligned_cols=52 Identities=31% Similarity=0.469 Sum_probs=37.5
Q ss_pred HHHHHHHhCCCCeeEEEEe-----ccCc--EEEEEecCCCHHHHHHHHHHhCcccccCC
Q 047678 19 SKCKRALFKLKGVEEVEIE-----MEVQ--KITVRGYALDEKKVLKAIKRAGKAAEPWP 70 (136)
Q Consensus 19 ~~v~~~l~~~~gv~~v~vd-----~~~~--~v~V~~~~~~~~~v~~~l~~~g~~~~~~~ 70 (136)
-.+-+.|.++.||..+++. ..+. ++++.|..++.+.+.+.|.+.|.....+.
T Consensus 22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3566778888898887654 3444 44556766999999999999998665543
No 46
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=83.53 E-value=4.8 Score=23.39 Aligned_cols=57 Identities=4% Similarity=-0.013 Sum_probs=40.7
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEec-CCCHHHHHHHHHHhCcccccC
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGY-ALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~-~~~~~~v~~~l~~~g~~~~~~ 69 (136)
..++.+.|+.|+....+++++|.++.. .+.+.|..+ ......+.+.+++.|+.....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 356888899999999999999998732 223344332 244567888888999876554
No 47
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=83.21 E-value=2.3 Score=25.88 Aligned_cols=57 Identities=12% Similarity=0.014 Sum_probs=39.4
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEec-CCCHHHHHHHHHHhCcccccC
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGY-ALDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~-~~~~~~v~~~l~~~g~~~~~~ 69 (136)
..++.+.|+.|+.-.-+++++|.+++. .+.+.|..+ ......|.+.+++.|+.+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 456788899999999999999998732 223333332 234456777888899876543
No 48
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=80.54 E-value=6.6 Score=23.16 Aligned_cols=56 Identities=18% Similarity=0.131 Sum_probs=39.2
Q ss_pred EEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCcccccC
Q 047678 6 EVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 6 ~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~~ 69 (136)
++.+.|+.|+.-..+++++|.++.. ..+.+.|..+. ...+.|.+.+++.|+.+...
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~--------~G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~ 59 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGE--------AGGVVTVLVDNDISRQNLQKMAEGMGYQSEYL 59 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGG--------GCCEEEEEESSHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccC--------CCCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 4677799999999999999998730 12334444331 34567788888999887554
No 49
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=72.01 E-value=19 Score=24.07 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=40.1
Q ss_pred CceEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCc---------------EEEEEecC--CCHHHHHHHHHH
Q 047678 1 MQLMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQ---------------KITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 1 ~~~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~---------------~v~V~~~~--~~~~~v~~~l~~ 61 (136)
|+++..|. .||=+-++..+.+++||.++.+-...+ .|.|+.++ ++.++|++..-+
T Consensus 1 Mte~A~fa------gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 1 MTKRAVLA------GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp -CEEEEEE------ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred CceEEEEE------ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 55555544 478899999999999999999987765 34556553 788888876544
No 50
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=71.83 E-value=4.4 Score=23.18 Aligned_cols=55 Identities=16% Similarity=0.084 Sum_probs=38.6
Q ss_pred EEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecC-CCHHHHHHHHHHhCcccccC
Q 047678 6 EVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYA-LDEKKVLKAIKRAGKAAEPW 69 (136)
Q Consensus 6 ~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~-~~~~~v~~~l~~~g~~~~~~ 69 (136)
++.+.|+.|+.-.-+++++|.++.. .+.+.|..+. .....+.+.+++.|+.....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~~~ 63 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELVGV 63 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 4567799999999999999998732 2234444332 34577888888999876543
No 51
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=70.04 E-value=15 Score=22.04 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHh
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRA 62 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~ 62 (136)
++=...|.+.|.+++|+.-...+...+++.|+-+..+.+++.+.+.+.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 445678999999999995444455577887775435666766666443
No 52
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=65.91 E-value=12 Score=22.55 Aligned_cols=34 Identities=44% Similarity=0.738 Sum_probs=22.8
Q ss_pred EEEEecCCCChhH------HHHHHHHHhCCCCeeEEEEecc
Q 047678 5 VEVRVPNLDCEGC------ASKCKRALFKLKGVEEVEIEME 39 (136)
Q Consensus 5 v~~~v~~m~C~~C------~~~v~~~l~~~~gv~~v~vd~~ 39 (136)
+.+.+ .+.+++| ...++.+|..++||..+++.+.
T Consensus 43 V~v~l-~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 43 AYVRM-TLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEE-CCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEE-EECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 33444 3445555 4568888888999998888643
No 53
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=59.95 E-value=17 Score=21.79 Aligned_cols=22 Identities=36% Similarity=0.620 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCCeeEEEEecc
Q 047678 18 ASKCKRALFKLKGVEEVEIEME 39 (136)
Q Consensus 18 ~~~v~~~l~~~~gv~~v~vd~~ 39 (136)
...++.+|..++||..+++.+.
T Consensus 62 ~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 62 LSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp HHHHHHHHHTSSSCCEEEEEEC
T ss_pred HHHHHHHHHhCCCcceEEEEEe
Confidence 3457888888999998887643
No 54
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=48.20 E-value=55 Score=22.47 Aligned_cols=47 Identities=21% Similarity=0.296 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCcE-------------------EEEEecC--CCHHHHHHHHHH
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQK-------------------ITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~~-------------------v~V~~~~--~~~~~v~~~l~~ 61 (136)
.+|=+-++..+.+++||.++.+-...+. |.|+.++ ++.++|++..-+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 5788999999999999999998876653 4455543 677777776644
No 55
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=47.11 E-value=22 Score=21.57 Aligned_cols=23 Identities=26% Similarity=0.400 Sum_probs=17.2
Q ss_pred HHHHHHHH-hCCCCeeEEEEeccC
Q 047678 18 ASKCKRAL-FKLKGVEEVEIEMEV 40 (136)
Q Consensus 18 ~~~v~~~l-~~~~gv~~v~vd~~~ 40 (136)
...++.+| ..++|+..+.+.+..
T Consensus 64 ~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 64 VSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEECC
T ss_pred HHHHHHHHHHhCCCCceEEEEEEe
Confidence 45578888 889999888876543
No 56
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=42.38 E-value=75 Score=21.68 Aligned_cols=47 Identities=19% Similarity=0.216 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCcE-------------------EEEEecC--CCHHHHHHHHHH
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQK-------------------ITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~~-------------------v~V~~~~--~~~~~v~~~l~~ 61 (136)
.+|=+-++..+.+++||.++.+-...+. |.|+.++ ++.++|++..-+
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~ 76 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFR 76 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 5788999999999999999998766543 4455543 788888876543
No 57
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=40.82 E-value=78 Score=22.68 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCcE-------------------EEEEecC--CCHHHHHHHHHHh
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQK-------------------ITVRGYA--LDEKKVLKAIKRA 62 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~~-------------------v~V~~~~--~~~~~v~~~l~~~ 62 (136)
.||=+-+++.+.+++||.++.+-...+. |.|+.++ ++.++|++..-+.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 5799999999999999999998876553 4455553 6778887765443
No 58
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=37.99 E-value=96 Score=21.47 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCc-------------------EEEEEecC--CCHHHHHHHHHH
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQ-------------------KITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~-------------------~v~V~~~~--~~~~~v~~~l~~ 61 (136)
.+|=+-++..+.+++||.++.+-...+ .|.|+.++ ++.++|++..-+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 578889999999999999999887643 24555553 778888776544
No 59
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=35.51 E-value=50 Score=19.30 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=20.4
Q ss_pred eEEEEEecCCCChhHHHHHHHHHhCCCCeeEEEEec
Q 047678 3 LMVEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEM 38 (136)
Q Consensus 3 ~~v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~ 38 (136)
..+++-. .-.|+.|. ++++.|.+ .||....+|.
T Consensus 4 a~I~vYs-~~~Cp~C~-~aK~~L~~-~gi~y~~idi 36 (92)
T 2lqo_A 4 AALTIYT-TSWCGYCL-RLKTALTA-NRIAYDEVDI 36 (92)
T ss_dssp SCEEEEE-CTTCSSHH-HHHHHHHH-TTCCCEEEET
T ss_pred CcEEEEc-CCCCHhHH-HHHHHHHh-cCCceEEEEc
Confidence 3344444 46799995 57777765 4666555543
No 60
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=34.66 E-value=1.1e+02 Score=21.02 Aligned_cols=47 Identities=13% Similarity=0.123 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCc---------------EEEEEecC--CCHHHHHHHHHH
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQ---------------KITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~---------------~v~V~~~~--~~~~~v~~~l~~ 61 (136)
.+|=+-++..+.+++||.++.+-...+ .|.|+.++ ++.++|++..-+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 578899999999999999999887654 34455553 778888876544
No 61
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=30.44 E-value=1.3e+02 Score=22.10 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEeccCcE-----------------EEEEecC--CCHHHHHHHHHH
Q 047678 15 EGCASKCKRALFKLKGVEEVEIEMEVQK-----------------ITVRGYA--LDEKKVLKAIKR 61 (136)
Q Consensus 15 ~~C~~~v~~~l~~~~gv~~v~vd~~~~~-----------------v~V~~~~--~~~~~v~~~l~~ 61 (136)
.+|=+-++..+.+++||.++.+-...+. |.|+.++ ++.++|++..-+
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 5788999999999999999998877653 4555553 788888876543
No 62
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=30.40 E-value=70 Score=18.15 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=20.7
Q ss_pred CceEEEEEecCCCChhHH-----HHHHHHHhCCCCeeEEEEe
Q 047678 1 MQLMVEVRVPNLDCEGCA-----SKCKRALFKLKGVEEVEIE 37 (136)
Q Consensus 1 ~~~~v~~~v~~m~C~~C~-----~~v~~~l~~~~gv~~v~vd 37 (136)
|.. +++-. .-.|+.|. .++++.|... ||.-..+|
T Consensus 1 M~~-v~ly~-~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~d 39 (93)
T 1t1v_A 1 MSG-LRVYS-TSVTGSREIKSQQSEVTRILDGK-RIQYQLVD 39 (93)
T ss_dssp CCC-EEEEE-CSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEE
T ss_pred CCC-EEEEE-cCCCCCchhhHHHHHHHHHHHHC-CCceEEEE
Confidence 433 33444 45799997 7788888764 55444443
No 63
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=27.81 E-value=1.1e+02 Score=18.74 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=30.4
Q ss_pred CCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCc-cc
Q 047678 11 NLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGK-AA 66 (136)
Q Consensus 11 ~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~-~~ 66 (136)
.-.|..|. ++++.|.. .|+....+|.... +.+.+++...+...|. .+
T Consensus 12 ~p~C~~c~-ka~~~L~~-~gi~~~~~di~~~-------~~~~~eL~~~l~~~g~~~~ 59 (121)
T 3rdw_A 12 NPRCSKSR-ETLALVEQ-QGITPQVVLYLET-------PPSVDKLKELLQQLGFSDA 59 (121)
T ss_dssp CTTCHHHH-HHHHHHHT-TTCCCEEECTTTS-------CCCHHHHHHHHHHTTCSSG
T ss_pred CCCCHHHH-HHHHHHHH-cCCCcEEEeeccC-------CCcHHHHHHHHHhcCCcCH
Confidence 45799995 56666654 4665444444332 3678888888888886 54
No 64
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=26.98 E-value=1e+02 Score=18.30 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=29.1
Q ss_pred HHHHHhCCCCeeEEEEeccCcEEEEEec-CCCHHHHHHHHHHh
Q 047678 21 CKRALFKLKGVEEVEIEMEVQKITVRGY-ALDEKKVLKAIKRA 62 (136)
Q Consensus 21 v~~~l~~~~gv~~v~vd~~~~~v~V~~~-~~~~~~v~~~l~~~ 62 (136)
+-+.|-.++||.+|-+. ..=++|+-. ..+++.|...|...
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~~ 81 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIENT 81 (94)
T ss_dssp HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHHH
Confidence 44445579999999874 677788753 37899988887643
No 65
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=26.60 E-value=1.1e+02 Score=18.61 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccc
Q 047678 11 NLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAE 67 (136)
Q Consensus 11 ~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~ 67 (136)
.-.|..|. ++++.|.. .|+....+|.... +.+.+++...+...|..++
T Consensus 11 ~p~C~~c~-ka~~~L~~-~gi~~~~~di~~~-------~~~~~eL~~~l~~~g~~~~ 58 (120)
T 3gkx_A 11 YPACSTCQ-KAKKWLIE-NNIEYTNRLIVDD-------NPTVEELKAWIPLSGLPVK 58 (120)
T ss_dssp CTTCHHHH-HHHHHHHH-TTCCCEEEETTTT-------CCCHHHHHHHHHHHTSCGG
T ss_pred CCCChHHH-HHHHHHHH-cCCceEEEecccC-------cCCHHHHHHHHHHcCCCHH
Confidence 45799995 55666654 4665444444332 3677888888888886543
No 66
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=26.27 E-value=90 Score=17.31 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=14.5
Q ss_pred EEEEEecCCCChhHHHHHHHHHhCC
Q 047678 4 MVEVRVPNLDCEGCASKCKRALFKL 28 (136)
Q Consensus 4 ~v~~~v~~m~C~~C~~~v~~~l~~~ 28 (136)
++.+-. .-.|+.|. +++..|...
T Consensus 7 ~v~ly~-~~~C~~C~-~~~~~L~~~ 29 (92)
T 2khp_A 7 DVIIYT-RPGCPYCA-RAKALLARK 29 (92)
T ss_dssp CEEEEE-CTTCHHHH-HHHHHHHHT
T ss_pred cEEEEE-CCCChhHH-HHHHHHHHc
Confidence 343433 46799995 667777654
No 67
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.43 E-value=1.3e+02 Score=18.63 Aligned_cols=56 Identities=9% Similarity=0.028 Sum_probs=42.0
Q ss_pred EEEEecCCCCh-hHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCC-HHHHHHHHHHh
Q 047678 5 VEVRVPNLDCE-GCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALD-EKKVLKAIKRA 62 (136)
Q Consensus 5 v~~~v~~m~C~-~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~-~~~v~~~l~~~ 62 (136)
..+.|.++... .+...++..++....|..+.+........|... + ..+..++++.+
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~--~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFK--EKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEES--SCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEEC--CChHHHHHHHHHh
Confidence 45677677777 678889999999888999998777777777765 4 55566666654
No 68
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=23.62 E-value=1.2e+02 Score=19.14 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=28.5
Q ss_pred CCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcc
Q 047678 11 NLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKA 65 (136)
Q Consensus 11 ~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~ 65 (136)
.-.|..|. ++++.|.. .|+....+|.... ..+.+++.+.+.+.|..
T Consensus 9 ~p~C~~cr-kak~~L~~-~gi~~~~idi~~~-------~~~~~eL~~~~~~~g~p 54 (141)
T 1s3c_A 9 NPASGTSR-NTLEMIRN-SGTEPTIILYLEN-------PPSRDELVKLIADMGIS 54 (141)
T ss_dssp CTTCHHHH-HHHHHHHH-TTCCCEEECTTTS-------CCCHHHHHHHHHHHTSC
T ss_pred CCCChHHH-HHHHHHHH-cCCCEEEEECCCC-------CccHHHHHHHhcccCCC
Confidence 45799994 66666654 4665555554332 25667777777777654
No 69
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=22.90 E-value=1e+02 Score=18.24 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=29.7
Q ss_pred hHHHHHHHHHhCCCCeeEEEEeccCcEEEEEec-CCCHHHHHHHHHHh
Q 047678 16 GCASKCKRALFKLKGVEEVEIEMEVQKITVRGY-ALDEKKVLKAIKRA 62 (136)
Q Consensus 16 ~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~-~~~~~~v~~~l~~~ 62 (136)
.+.-.++ .|-.++||.+|-+. ..=++|+-. ..+++.|...|...
T Consensus 37 ~~SPLA~-~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~~ 81 (91)
T 1pqx_A 37 SQPAFIN-DILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEAV 81 (91)
T ss_dssp SCCHHHH-HHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHHH
T ss_pred cCCHHHH-HhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHHH
Confidence 3433444 44479999998874 677788753 27888888777643
No 70
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=21.98 E-value=1.4e+02 Score=18.13 Aligned_cols=48 Identities=13% Similarity=0.211 Sum_probs=30.5
Q ss_pred CCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEEEecCCCHHHHHHHHHHhCcccc
Q 047678 11 NLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITVRGYALDEKKVLKAIKRAGKAAE 67 (136)
Q Consensus 11 ~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V~~~~~~~~~v~~~l~~~g~~~~ 67 (136)
.-.|..|. +.++.|.. .|+.-..+|.... +.+.+++...+.+.|..++
T Consensus 10 ~~~C~~c~-ka~~~L~~-~gi~~~~~di~~~-------~~~~~eL~~~l~~~g~~~~ 57 (120)
T 3fz4_A 10 YPKCSTCR-RAKAELDD-LAWDYDAIDIKKN-------PPAASLIRNWLENSGLELK 57 (120)
T ss_dssp CSSCHHHH-HHHHHHHH-HTCCEEEEETTTS-------CCCHHHHHHHHHHSCCCGG
T ss_pred CCCChHHH-HHHHHHHH-cCCceEEEEeccC-------chhHHHHHHHHHHcCCCHH
Confidence 45799995 55555554 3665555544332 3677888888888886543
No 71
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=20.35 E-value=38 Score=25.26 Aligned_cols=41 Identities=15% Similarity=0.274 Sum_probs=33.0
Q ss_pred EEEEecCCCChhHHHHHHHHHhCCCCeeEEEEeccCcEEEE
Q 047678 5 VEVRVPNLDCEGCASKCKRALFKLKGVEEVEIEMEVQKITV 45 (136)
Q Consensus 5 v~~~v~~m~C~~C~~~v~~~l~~~~gv~~v~vd~~~~~v~V 45 (136)
+++.+.|+.|++...++++++..+.--..+++....+++.+
T Consensus 322 ~~~~~~g~~~~~p~~~~~~~~~~~~~g~~~~v~~~~~~~~~ 362 (373)
T 1okg_A 322 MTLKVDGAPCERPDAEVQSAATHLHAGEAATVYFKSGRVVT 362 (373)
T ss_dssp CCEEETTEEESSCCHHHHHHHTTCBTTCEEEEEETTSCEEE
T ss_pred eeeeccCcccCCcHHHHHHHHHhcCCCCcEEEEEccCcEEE
Confidence 35678899999999999999999977677777777766654
Done!