BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047680
MCTSFKAYLTASHLSDLAVLSAVLLKQNLEPCSLTKKLFPTGFYAAIRASMLCFYSYVVA
SGGNPPPNKLKSSAAAAS

High Scoring Gene Products

Symbol, full name Information P value
AT3G57280 protein from Arabidopsis thaliana 1.6e-13
AT3G20510 protein from Arabidopsis thaliana 6.3e-05
AT1G50740 protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047680
        (78 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2082578 - symbol:AT3G57280 "AT3G57280" species...   176  1.6e-13   1
TAIR|locus:2085780 - symbol:AT3G20510 species:3702 "Arabi...    95  6.3e-05   1
TAIR|locus:2033177 - symbol:AT1G50740 "AT1G50740" species...    88  0.00035   1


>TAIR|locus:2082578 [details] [associations]
            symbol:AT3G57280 "AT3G57280" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0009706 "chloroplast inner membrane"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
            InterPro:IPR005349 Pfam:PF03647 GO:GO:0016021 EMBL:CP002686
            GO:GO:0009706 PANTHER:PTHR12668 EMBL:AY039525 EMBL:AY052733
            EMBL:AY085316 IPI:IPI00517800 RefSeq:NP_567046.1 UniGene:At.909
            IntAct:Q93V66 STRING:Q93V66 PaxDb:Q93V66 PRIDE:Q93V66
            EnsemblPlants:AT3G57280.1 GeneID:824895 KEGG:ath:AT3G57280
            TAIR:At3g57280 eggNOG:NOG268641 HOGENOM:HOG000070593
            InParanoid:Q93V66 OMA:CFGIPYG PhylomeDB:Q93V66
            ProtClustDB:CLSN2689203 Genevestigator:Q93V66 Uniprot:Q93V66
        Length = 226

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 34/52 (65%), Positives = 38/52 (73%)

Query:    27 QNLEPCSLTKKLFPTGFYAAIRASMLCFYSYVVASGGNPPPNKLKSSAAAAS 78
             +N    S+TKKLFP G +A I A MLCFYSYVV SGGNPPP KLK SA + S
Sbjct:   174 KNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATSPS 225


>TAIR|locus:2085780 [details] [associations]
            symbol:AT3G20510 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR005349 Pfam:PF03647
            GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AP000410 HOGENOM:HOG000211932
            PANTHER:PTHR12668 eggNOG:NOG240787 OMA:YISLKAF
            ProtClustDB:CLSN2685039 EMBL:BT010505 EMBL:AK176567 EMBL:AK176851
            IPI:IPI00541215 RefSeq:NP_188687.1 UniGene:At.43873 IntAct:Q9LJU6
            STRING:Q9LJU6 PaxDb:Q9LJU6 PRIDE:Q9LJU6 EnsemblPlants:AT3G20510.1
            GeneID:821597 KEGG:ath:AT3G20510 TAIR:At3g20510 InParanoid:Q9LJU6
            PhylomeDB:Q9LJU6 Genevestigator:Q9LJU6 Uniprot:Q9LJU6
        Length = 119

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 19/36 (52%), Positives = 22/36 (61%)

Query:    34 LTKKLFPTGFYAAIRASMLCFYSYVVASGGNPPPNK 69
             LT K+ P G  A I A M CFY Y +A+GGN  P K
Sbjct:    82 LTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117


>TAIR|locus:2033177 [details] [associations]
            symbol:AT1G50740 "AT1G50740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=RCA] [GO:0030968 "endoplasmic
            reticulum unfolded protein response" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] InterPro:IPR005349
            Pfam:PF03647 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000211932 PANTHER:PTHR12668 OMA:WIGFAYA EMBL:AC079027
            EMBL:AY074495 EMBL:AY096728 EMBL:AY087361 IPI:IPI00518839
            PIR:C96544 RefSeq:NP_564579.1 UniGene:At.43937 STRING:Q9C6T7
            EnsemblPlants:AT1G50740.1 GeneID:841496 KEGG:ath:AT1G50740
            TAIR:At1g50740 eggNOG:NOG275159 InParanoid:Q9C6T7 PhylomeDB:Q9C6T7
            ProtClustDB:CLSN2685039 ArrayExpress:Q9C6T7 Genevestigator:Q9C6T7
            Uniprot:Q9C6T7
        Length = 119

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query:    35 TKKLFPTGFYAAIRASMLCFYSYVVASGGNPPPNK 69
             T+K+ P    A I A M CFY Y +A+GGN  P K
Sbjct:    83 TQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.129   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       78        63   0.00091  102 3  11 22  0.38    28
                                                     29  0.42    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  425 (45 KB)
  Total size of DFA:  76 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.55u 0.15s 6.70t   Elapsed:  00:00:00
  Total cpu time:  6.55u 0.15s 6.70t   Elapsed:  00:00:00
  Start:  Mon May 20 15:07:14 2013   End:  Mon May 20 15:07:14 2013

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