Query 047680
Match_columns 78
No_of_seqs 102 out of 130
Neff 4.0
Searched_HMMs 13730
Date Tue Mar 26 00:09:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047680.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047680hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jkwa1 a.74.1.1 (A:11-161) Cy 10.3 1.6E+02 0.012 16.9 4.8 32 23-54 71-104 (151)
2 d2i53a1 a.74.1.1 (A:14-157) Cy 9.6 1.7E+02 0.012 16.6 4.6 34 22-55 58-93 (144)
3 d2axth1 f.23.33.1 (H:2-65) Pho 9.2 1.4E+02 0.01 16.5 2.9 24 34-57 16-40 (64)
4 d1iq3a_ a.39.1.6 (A:) Pob1 {Hu 8.2 1.2E+02 0.0087 17.0 2.4 22 53-74 81-102 (110)
5 d2ivxa1 a.74.1.1 (A:7-149) Cyc 6.9 2.2E+02 0.016 15.8 4.6 34 22-55 52-87 (143)
6 d1v54d_ f.23.1.1 (D:) Mitochon 6.8 2.6E+02 0.019 17.2 3.7 24 41-64 80-103 (144)
7 d1mxsa_ c.1.10.1 (A:) KDPG ald 6.0 84 0.0061 20.4 1.0 18 35-52 133-150 (216)
8 d3lada1 c.3.1.5 (A:1-158,A:278 5.9 1.3E+02 0.0092 17.1 1.7 11 40-50 13-23 (229)
9 d1fgka_ d.144.1.7 (A:) Fibrobl 4.7 2.1E+02 0.015 17.8 2.3 13 56-68 227-239 (299)
10 d1xkka_ d.144.1.7 (A:) EGF rec 4.5 2.6E+02 0.019 17.5 2.7 16 55-70 202-217 (317)
No 1
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.29 E-value=1.6e+02 Score=16.91 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=22.5
Q ss_pred HHHHHhhhhhhccCccchhH--HHHHHHHHHHHH
Q 047680 23 VLLKQNLEPCSLTKKLFPTG--FYAAIRASMLCF 54 (78)
Q Consensus 23 ~L~~vMg~Rf~~t~KlmPAG--lva~lS~~M~~f 54 (78)
.++.++..||+..++++.-- +++..++.+.++
T Consensus 71 ~tA~~~~~RF~~~~s~~~~~~~li~~acl~LA~K 104 (151)
T d1jkwa1 71 GTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACK 104 (151)
T ss_dssp HHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCccccccHHHHHHHHHHHHHH
Confidence 46777889999999988744 555555555554
No 2
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.63 E-value=1.7e+02 Score=16.61 Aligned_cols=34 Identities=3% Similarity=-0.279 Sum_probs=23.2
Q ss_pred HHHHHHhhhhhhccCccch--hHHHHHHHHHHHHHH
Q 047680 22 AVLLKQNLEPCSLTKKLFP--TGFYAAIRASMLCFY 55 (78)
Q Consensus 22 ~~L~~vMg~Rf~~t~KlmP--AGlva~lS~~M~~fy 55 (78)
..++..+..||...+.+.. .-++++.++.+.+++
T Consensus 58 ~~~A~~~~dRf~~~~~~~~~~~~lva~acl~LA~K~ 93 (144)
T d2i53a1 58 LATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKV 93 (144)
T ss_dssp HHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcccchhHHHHHHHHHHHHHHh
Confidence 3567788899988887655 335666666666664
No 3
>d2axth1 f.23.33.1 (H:2-65) Photosystem II reaction center protein H, PsbH {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=9.16 E-value=1.4e+02 Score=16.49 Aligned_cols=24 Identities=21% Similarity=0.159 Sum_probs=13.6
Q ss_pred ccCccch-hHHHHHHHHHHHHHHHH
Q 047680 34 LTKKLFP-TGFYAAIRASMLCFYSY 57 (78)
Q Consensus 34 ~t~KlmP-AGlva~lS~~M~~fy~y 57 (78)
..+|+-| +|-.-+....|..|..+
T Consensus 16 eyGKVaPGWGTTplMgv~m~Lf~vf 40 (64)
T d2axth1 16 EYGKVAPGWGTTPLMAVFMGLFLVF 40 (64)
T ss_dssp CSSCCCSTTTTHHHHHHHHHHHHHH
T ss_pred ccCcccCCcCccHHHHHHHHHHHHH
Confidence 4578888 55444445555554433
No 4
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.22 E-value=1.2e+02 Score=16.98 Aligned_cols=22 Identities=27% Similarity=0.424 Sum_probs=14.0
Q ss_pred HHHHHHHhcCCCCCCCccCccc
Q 047680 53 CFYSYVVASGGNPPPNKLKSSA 74 (78)
Q Consensus 53 ~fy~y~ll~GGNpppkk~~~~~ 74 (78)
+++......-|+|+|..+.++.
T Consensus 81 am~Li~~~~~G~~lP~~LP~~l 102 (110)
T d1iq3a_ 81 AFHLIVARKNGYPLPEGLPPTL 102 (110)
T ss_dssp HHHHHHHHHHTCCCCCCSSCCS
T ss_pred HHHHHHHHHcCCCCCcccCccc
Confidence 3444445556888888886554
No 5
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.93 E-value=2.2e+02 Score=15.84 Aligned_cols=34 Identities=0% Similarity=-0.147 Sum_probs=22.5
Q ss_pred HHHHHHhhhhhhccCccchh--HHHHHHHHHHHHHH
Q 047680 22 AVLLKQNLEPCSLTKKLFPT--GFYAAIRASMLCFY 55 (78)
Q Consensus 22 ~~L~~vMg~Rf~~t~KlmPA--Glva~lS~~M~~fy 55 (78)
..++..+..||+..+.+.+- =++++.++.+.+++
T Consensus 52 ~~~A~~l~~Rf~~~~s~~~~~~~~va~acl~LA~K~ 87 (143)
T d2ivxa1 52 INTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKV 87 (143)
T ss_dssp HHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 35678889999988877663 34555555555543
No 6
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.78 E-value=2.6e+02 Score=17.18 Aligned_cols=24 Identities=13% Similarity=-0.186 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCC
Q 047680 41 TGFYAAIRASMLCFYSYVVASGGN 64 (78)
Q Consensus 41 AGlva~lS~~M~~fy~y~ll~GGN 64 (78)
.|++.++|+..+.|+..+...-+.
T Consensus 80 g~~~~~i~~s~~i~~~~r~~v~p~ 103 (144)
T d1v54d_ 80 GAAMFFIGFTALLLIWEKHYVYGP 103 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 566677787777777777765443
No 7
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=6.02 E-value=84 Score=20.44 Aligned_cols=18 Identities=28% Similarity=0.348 Sum_probs=12.5
Q ss_pred cCccchhHHHHHHHHHHH
Q 047680 35 TKKLFPTGFYAAIRASML 52 (78)
Q Consensus 35 t~KlmPAGlva~lS~~M~ 52 (78)
.-|+|||+.+.+.+.+=.
T Consensus 133 ~vKlFPA~~~~g~~~ika 150 (216)
T d1mxsa_ 133 RFKLFPAEISGGVAAIKA 150 (216)
T ss_dssp EEEETTHHHHTHHHHHHH
T ss_pred EEEeccccccccHHHHHH
Confidence 358999998766665433
No 8
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=5.91 E-value=1.3e+02 Score=17.14 Aligned_cols=11 Identities=45% Similarity=0.933 Sum_probs=7.5
Q ss_pred hhHHHHHHHHH
Q 047680 40 PTGFYAAIRAS 50 (78)
Q Consensus 40 PAGlva~lS~~ 50 (78)
|||+.|++-++
T Consensus 13 pAGl~aA~~aa 23 (229)
T d3lada1 13 PGGYVAAIKSA 23 (229)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78887766543
No 9
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.66 E-value=2.1e+02 Score=17.81 Aligned_cols=13 Identities=15% Similarity=0.232 Sum_probs=10.1
Q ss_pred HHHHhcCCCCCCC
Q 047680 56 SYVVASGGNPPPN 68 (78)
Q Consensus 56 ~y~ll~GGNpppk 68 (78)
.|.|+++|+||..
T Consensus 227 l~ell~~g~~p~~ 239 (299)
T d1fgka_ 227 LWEIFTLGGSPYP 239 (299)
T ss_dssp HHHHHTTSCCSST
T ss_pred HHHhccCCCCCCC
Confidence 5778888888775
No 10
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.50 E-value=2.6e+02 Score=17.54 Aligned_cols=16 Identities=13% Similarity=0.252 Sum_probs=11.0
Q ss_pred HHHHHhcCCCCCCCcc
Q 047680 55 YSYVVASGGNPPPNKL 70 (78)
Q Consensus 55 y~y~ll~GGNpppkk~ 70 (78)
..|.|+++|.||....
T Consensus 202 il~el~t~g~~p~~~~ 217 (317)
T d1xkka_ 202 TVWELMTFGSKPYDGI 217 (317)
T ss_dssp HHHHHHTTSCCTTTTS
T ss_pred HHHHHHHCCCCCCCCC
Confidence 3566788888887543
Done!