Query 047682
Match_columns 1425
No_of_seqs 816 out of 5930
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 13:37:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047682.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047682hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 3E-251 6E-256 2312.3 95.2 1340 5-1425 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-234 6E-239 2324.4 144.3 1418 3-1425 39-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 5E-185 1E-189 1859.7 134.5 1288 63-1420 3-1389(1394)
4 KOG0061 Transporter, ABC super 100.0 2.7E-95 6E-100 910.3 56.0 578 823-1424 22-611 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.3E-94 2.8E-99 916.5 59.8 565 851-1425 37-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 3.6E-94 7.8E-99 910.0 61.0 582 823-1422 36-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-91 2.4E-96 950.0 62.7 562 850-1422 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 1.3E-90 2.9E-95 933.7 58.2 592 821-1421 126-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 1.9E-85 4E-90 822.2 38.6 564 850-1423 126-732 (1391)
10 TIGR00955 3a01204 The Eye Pigm 100.0 1.9E-78 4.2E-83 768.8 58.7 568 132-743 36-612 (617)
11 KOG0061 Transporter, ABC super 100.0 2.1E-78 4.6E-83 758.1 57.2 583 83-743 21-607 (613)
12 PLN03211 ABC transporter G-25; 100.0 1.3E-77 2.8E-82 759.2 63.8 609 83-744 35-658 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 1.2E-74 2.6E-79 728.1 52.2 834 49-1064 316-1208(1228)
14 TIGR01257 rim_protein retinal- 100.0 3.9E-70 8.5E-75 733.2 72.5 223 826-1075 1937-2161(2272)
15 KOG0054 Multidrug resistance-a 100.0 1.4E-70 3E-75 708.8 49.9 765 135-1065 535-1358(1381)
16 PLN03130 ABC transporter C fam 100.0 4.3E-67 9.3E-72 716.9 55.8 211 826-1065 1237-1457(1622)
17 PLN03232 ABC transporter C fam 100.0 3.7E-66 7.9E-71 708.8 56.0 210 826-1064 1234-1453(1495)
18 COG1123 ATPase components of v 100.0 9.1E-66 2E-70 610.2 50.6 474 134-1064 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 1E-64 2.2E-69 687.3 63.6 216 826-1064 1165-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 4.7E-65 1E-69 698.8 55.2 211 825-1064 1283-1503(1522)
21 PRK13549 xylose transporter AT 100.0 1.2E-64 2.6E-69 632.1 46.7 458 134-1066 18-491 (506)
22 PRK10261 glutathione transport 100.0 8.3E-64 1.8E-68 635.7 53.6 488 134-1065 29-549 (623)
23 PRK09700 D-allose transporter 100.0 2.3E-64 5E-69 630.7 46.7 458 134-1064 18-493 (510)
24 PRK10762 D-ribose transporter 100.0 2.6E-64 5.6E-69 628.3 46.7 450 134-1066 17-481 (501)
25 PRK15134 microcin C ABC transp 100.0 2.9E-63 6.3E-68 622.9 51.9 464 134-1064 22-510 (529)
26 TIGR03269 met_CoM_red_A2 methy 100.0 1.9E-63 4.2E-68 623.7 49.5 217 827-1064 280-512 (520)
27 PRK15439 autoinducer 2 ABC tra 100.0 1.7E-63 3.6E-68 621.2 47.7 453 134-1065 24-488 (510)
28 TIGR02633 xylG D-xylose ABC tr 100.0 5.1E-63 1.1E-67 617.5 47.3 458 134-1065 14-488 (500)
29 PRK11288 araG L-arabinose tran 100.0 6.8E-63 1.5E-67 615.5 48.0 452 134-1067 17-483 (501)
30 TIGR01271 CFTR_protein cystic 100.0 2.4E-62 5.3E-67 669.8 53.0 210 825-1064 1216-1435(1490)
31 PTZ00243 ABC transporter; Prov 100.0 5.5E-62 1.2E-66 666.1 55.2 211 825-1064 1307-1528(1560)
32 PRK10982 galactose/methyl gala 100.0 6E-62 1.3E-66 606.1 47.9 450 134-1065 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 5.9E-61 1.3E-65 597.4 42.5 213 826-1060 260-483 (490)
34 COG4172 ABC-type uncharacteriz 100.0 7E-59 1.5E-63 515.6 45.6 471 132-1064 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.4E-58 3.1E-63 582.3 52.1 201 826-1063 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 2.7E-58 5.9E-63 578.1 50.9 199 826-1064 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 7E-58 1.5E-62 576.1 49.5 201 826-1063 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 1.9E-55 4.2E-60 559.2 52.9 197 826-1064 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 4.9E-56 1.1E-60 556.0 43.0 211 826-1078 340-554 (590)
40 COG1129 MglA ABC-type sugar tr 100.0 2.9E-55 6.2E-60 517.9 44.3 452 128-1060 15-481 (500)
41 PRK11147 ABC transporter ATPas 100.0 1.4E-54 3E-59 553.2 53.2 202 826-1064 319-523 (635)
42 COG0488 Uup ATPase components 100.0 1.3E-53 2.9E-58 519.0 41.8 221 132-382 14-239 (530)
43 PLN03073 ABC transporter F fam 100.0 3E-53 6.6E-58 539.3 43.2 200 826-1064 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 7.6E-51 1.6E-55 468.4 41.3 459 131-1065 14-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 5.1E-44 1.1E-48 371.6 21.8 214 827-1064 3-220 (240)
46 KOG0927 Predicted transporter 100.0 2.1E-43 4.5E-48 406.9 27.8 201 826-1064 389-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 1E-43 2.2E-48 369.4 21.1 224 130-404 11-238 (240)
48 COG1131 CcmA ABC-type multidru 100.0 1E-41 2.2E-46 392.7 24.9 223 827-1077 5-230 (293)
49 COG1135 AbcC ABC-type metal io 100.0 9.7E-42 2.1E-46 372.0 23.0 224 132-406 17-246 (339)
50 COG1125 OpuBA ABC-type proline 100.0 9.4E-42 2E-46 360.5 20.6 211 132-383 12-225 (309)
51 COG1127 Ttg2A ABC-type transpo 100.0 1.5E-41 3.3E-46 358.6 21.4 230 826-1079 8-249 (263)
52 COG1135 AbcC ABC-type metal io 100.0 1.1E-41 2.3E-46 371.8 20.3 219 827-1065 2-227 (339)
53 COG1118 CysA ABC-type sulfate/ 100.0 2.8E-41 6.2E-46 367.1 20.0 225 131-404 12-240 (345)
54 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.6E-41 2.1E-45 365.0 24.1 217 826-1066 4-224 (254)
55 COG3839 MalK ABC-type sugar tr 100.0 3.6E-41 7.9E-46 384.3 21.4 217 136-403 18-235 (338)
56 COG1120 FepC ABC-type cobalami 100.0 6.4E-41 1.4E-45 368.5 21.4 210 133-382 14-227 (258)
57 COG1120 FepC ABC-type cobalami 100.0 7.1E-41 1.5E-45 368.2 21.1 218 826-1065 2-224 (258)
58 COG1116 TauB ABC-type nitrate/ 100.0 1E-40 2.3E-45 358.9 21.7 204 826-1055 3-207 (248)
59 TIGR01257 rim_protein retinal- 100.0 4.2E-36 9.1E-41 405.6 71.4 216 825-1064 927-1144(2272)
60 COG1136 SalX ABC-type antimicr 100.0 1.7E-40 3.6E-45 358.3 23.2 193 852-1056 18-219 (226)
61 COG3842 PotA ABC-type spermidi 100.0 5.7E-41 1.2E-45 384.7 19.4 224 132-405 16-240 (352)
62 KOG0058 Peptide exporter, ABC 100.0 8.2E-41 1.8E-45 401.5 21.5 231 80-383 455-691 (716)
63 COG1131 CcmA ABC-type multidru 100.0 1.8E-40 4E-45 382.3 23.6 212 133-387 17-230 (293)
64 COG1125 OpuBA ABC-type proline 100.0 8.2E-41 1.8E-45 353.4 18.7 213 827-1064 2-220 (309)
65 COG1127 Ttg2A ABC-type transpo 100.0 2.8E-40 6E-45 349.1 21.3 211 132-383 19-235 (263)
66 COG3638 ABC-type phosphate/pho 100.0 1.5E-40 3.2E-45 350.3 18.7 222 826-1068 3-236 (258)
67 COG1116 TauB ABC-type nitrate/ 100.0 2.6E-40 5.5E-45 355.9 20.9 194 134-372 16-211 (248)
68 COG4555 NatA ABC-type Na+ tran 100.0 6.4E-41 1.4E-45 342.7 15.3 202 852-1065 15-218 (245)
69 COG1118 CysA ABC-type sulfate/ 100.0 1.4E-40 3E-45 361.7 18.7 205 851-1065 14-223 (345)
70 COG4555 NatA ABC-type Na+ tran 100.0 1.3E-40 2.8E-45 340.4 16.2 208 132-383 13-222 (245)
71 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.6E-40 2.1E-44 357.1 23.9 208 135-383 18-227 (254)
72 COG2884 FtsE Predicted ATPase 100.0 1.1E-39 2.5E-44 331.1 19.3 212 827-1062 2-219 (223)
73 COG3839 MalK ABC-type sugar tr 100.0 1.3E-39 2.8E-44 371.6 22.2 215 826-1065 3-219 (338)
74 COG1117 PstB ABC-type phosphat 100.0 1.6E-39 3.5E-44 335.8 18.4 217 826-1064 7-232 (253)
75 COG1117 PstB ABC-type phosphat 100.0 1.9E-39 4.1E-44 335.3 18.8 223 133-403 19-249 (253)
76 COG3638 ABC-type phosphate/pho 100.0 2.5E-39 5.3E-44 341.0 19.9 217 132-383 15-237 (258)
77 COG3842 PotA ABC-type spermidi 100.0 1.8E-39 3.8E-44 372.4 20.1 216 826-1065 5-222 (352)
78 PRK13537 nodulation ABC transp 100.0 1.6E-38 3.4E-43 370.0 26.5 214 826-1064 7-222 (306)
79 COG1136 SalX ABC-type antimicr 100.0 1E-38 2.2E-43 344.5 22.3 196 134-372 18-220 (226)
80 COG2274 SunT ABC-type bacterio 100.0 9.6E-39 2.1E-43 401.1 23.4 258 47-383 436-696 (709)
81 TIGR02314 ABC_MetN D-methionin 100.0 5.5E-38 1.2E-42 367.9 27.9 206 134-382 18-229 (343)
82 TIGR03265 PhnT2 putative 2-ami 100.0 6.7E-38 1.5E-42 370.0 26.9 207 134-383 17-224 (353)
83 TIGR02314 ABC_MetN D-methionin 100.0 6.6E-38 1.4E-42 367.2 26.2 217 827-1064 2-225 (343)
84 TIGR03258 PhnT 2-aminoethylpho 100.0 8.7E-38 1.9E-42 369.3 27.1 207 134-382 18-227 (362)
85 PRK11650 ugpC glycerol-3-phosp 100.0 5.1E-38 1.1E-42 371.4 24.3 206 134-382 17-223 (356)
86 PRK11432 fbpC ferric transport 100.0 5.9E-38 1.3E-42 369.7 24.3 206 134-382 19-225 (351)
87 TIGR03265 PhnT2 putative 2-ami 100.0 8.7E-38 1.9E-42 369.0 25.7 215 826-1065 4-220 (353)
88 COG1122 CbiO ABC-type cobalt t 100.0 8.2E-38 1.8E-42 345.0 23.4 207 134-383 17-228 (235)
89 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-37 2.5E-42 351.2 25.1 213 828-1064 2-221 (235)
90 PRK13537 nodulation ABC transp 100.0 1.6E-37 3.5E-42 361.5 27.0 206 134-383 20-227 (306)
91 PRK11650 ugpC glycerol-3-phosp 100.0 1E-37 2.2E-42 368.9 25.5 215 827-1065 4-220 (356)
92 PRK11432 fbpC ferric transport 100.0 1.6E-37 3.4E-42 366.1 26.0 215 826-1065 6-222 (351)
93 TIGR01186 proV glycine betaine 100.0 1.4E-37 3.1E-42 366.1 25.5 209 132-383 4-219 (363)
94 COG3840 ThiQ ABC-type thiamine 100.0 5.6E-38 1.2E-42 315.7 18.1 201 139-382 17-218 (231)
95 TIGR03258 PhnT 2-aminoethylpho 100.0 1.9E-37 4.2E-42 366.3 26.0 215 826-1065 5-224 (362)
96 KOG0057 Mitochondrial Fe/S clu 100.0 1.5E-37 3.2E-42 360.7 24.0 229 79-383 343-574 (591)
97 PRK13536 nodulation factor exp 100.0 3.1E-37 6.7E-42 362.5 26.8 214 826-1064 41-256 (340)
98 PRK09452 potA putrescine/sperm 100.0 1.6E-37 3.5E-42 368.3 24.3 218 134-402 27-245 (375)
99 COG1124 DppF ABC-type dipeptid 100.0 1.7E-37 3.8E-42 330.2 21.7 205 135-383 21-231 (252)
100 PRK10851 sulfate/thiosulfate t 100.0 5.2E-37 1.1E-41 362.4 27.3 210 134-382 15-225 (353)
101 cd03259 ABC_Carb_Solutes_like 100.0 3.5E-37 7.5E-42 342.0 24.0 210 828-1062 2-213 (213)
102 KOG0062 ATPase component of AB 100.0 3.1E-37 6.6E-42 354.3 24.1 203 825-1064 361-564 (582)
103 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-37 3.7E-42 342.5 21.0 214 827-1064 4-223 (235)
104 TIGR00960 3a0501s02 Type II (G 100.0 3.7E-37 7.9E-42 342.6 23.9 207 827-1055 2-214 (216)
105 PRK10851 sulfate/thiosulfate t 100.0 5.2E-37 1.1E-41 362.4 26.2 216 827-1064 3-221 (353)
106 TIGR01188 drrA daunorubicin re 100.0 3.2E-37 7E-42 359.5 23.7 202 851-1064 5-208 (302)
107 PRK09452 potA putrescine/sperm 100.0 6.2E-37 1.3E-41 363.3 26.2 214 826-1064 14-229 (375)
108 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.5E-37 1.8E-41 340.6 25.4 200 852-1064 17-218 (220)
109 COG0411 LivG ABC-type branched 100.0 1.5E-37 3.2E-42 331.2 18.2 225 128-383 11-239 (250)
110 COG1137 YhbG ABC-type (unclass 100.0 8.1E-38 1.7E-42 319.6 15.3 206 850-1065 15-224 (243)
111 TIGR01288 nodI ATP-binding ABC 100.0 8.7E-37 1.9E-41 356.0 26.2 214 826-1064 4-219 (303)
112 COG2884 FtsE Predicted ATPase 100.0 3E-37 6.4E-42 313.6 19.2 200 134-377 15-220 (223)
113 cd03269 ABC_putative_ATPase Th 100.0 7.3E-37 1.6E-41 338.7 24.1 209 828-1062 2-210 (210)
114 PRK13536 nodulation factor exp 100.0 8.2E-37 1.8E-41 358.9 25.6 206 134-383 54-261 (340)
115 cd03261 ABC_Org_Solvent_Resist 100.0 6.7E-37 1.4E-41 345.0 23.8 207 134-382 13-225 (235)
116 PRK11607 potG putrescine trans 100.0 1.4E-36 3E-41 361.0 27.7 215 826-1065 19-235 (377)
117 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-37 4.9E-42 311.3 17.6 196 857-1064 17-214 (231)
118 PRK11607 potG putrescine trans 100.0 6.2E-37 1.4E-41 364.0 24.5 206 134-382 32-238 (377)
119 cd03265 ABC_DrrA DrrA is the A 100.0 9.6E-37 2.1E-41 340.2 24.5 212 828-1064 2-216 (220)
120 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-36 2.3E-41 338.2 24.7 210 828-1062 2-213 (213)
121 TIGR01188 drrA daunorubicin re 100.0 6E-37 1.3E-41 357.2 23.7 206 134-383 6-213 (302)
122 PRK11153 metN DL-methionine tr 100.0 1.2E-36 2.6E-41 359.5 26.0 217 827-1064 2-225 (343)
123 COG1124 DppF ABC-type dipeptid 100.0 5.4E-37 1.2E-41 326.5 20.3 217 826-1065 3-227 (252)
124 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-36 3.1E-41 342.7 25.2 215 828-1064 2-227 (236)
125 PRK11000 maltose/maltodextrin 100.0 1.4E-36 2.9E-41 361.8 26.1 215 826-1065 3-219 (369)
126 PRK11000 maltose/maltodextrin 100.0 9E-37 1.9E-41 363.3 24.6 206 134-382 16-222 (369)
127 COG1137 YhbG ABC-type (unclass 100.0 8.3E-38 1.8E-42 319.5 13.3 213 129-383 12-228 (243)
128 PRK11153 metN DL-methionine tr 100.0 2.4E-36 5.1E-41 357.0 27.6 206 134-382 18-229 (343)
129 KOG0056 Heavy metal exporter H 100.0 1.1E-37 2.4E-42 351.5 15.2 230 79-383 529-761 (790)
130 cd03266 ABC_NatA_sodium_export 100.0 1.3E-36 2.8E-41 338.7 23.6 215 827-1062 2-218 (218)
131 cd03218 ABC_YhbG The ABC trans 100.0 1.6E-36 3.6E-41 341.3 24.6 212 828-1064 2-217 (232)
132 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-36 3.8E-41 352.9 25.6 213 826-1064 2-216 (301)
133 TIGR01186 proV glycine betaine 100.0 1.4E-36 3E-41 357.8 25.0 203 851-1065 5-215 (363)
134 cd03296 ABC_CysA_sulfate_impor 100.0 2.6E-36 5.6E-41 340.9 26.1 217 826-1064 2-221 (239)
135 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-36 3.5E-41 361.4 24.9 218 826-1065 3-224 (402)
136 cd03234 ABCG_White The White s 100.0 2.8E-36 6.1E-41 337.7 25.4 221 827-1062 4-226 (226)
137 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-36 3.5E-41 338.0 23.1 207 828-1055 2-216 (218)
138 cd03260 ABC_PstB_phosphate_tra 100.0 1.9E-36 4.2E-41 339.5 23.3 213 828-1064 2-224 (227)
139 cd03268 ABC_BcrA_bacitracin_re 100.0 1.9E-36 4.2E-41 334.8 23.0 206 828-1062 2-208 (208)
140 COG0410 LivF ABC-type branched 100.0 1.4E-36 3E-41 321.3 20.4 208 132-383 14-226 (237)
141 cd03258 ABC_MetN_methionine_tr 100.0 2.9E-36 6.4E-41 339.4 24.1 217 827-1064 2-225 (233)
142 TIGR02673 FtsE cell division A 100.0 2.9E-36 6.3E-41 335.0 23.5 206 827-1055 2-213 (214)
143 TIGR01288 nodI ATP-binding ABC 100.0 4.6E-36 1E-40 350.0 26.3 206 134-383 17-224 (303)
144 COG4152 ABC-type uncharacteriz 100.0 9E-37 1.9E-41 320.7 18.1 212 827-1064 3-214 (300)
145 cd03256 ABC_PhnC_transporter A 100.0 2.4E-36 5.2E-41 342.0 23.1 204 852-1064 14-229 (241)
146 cd03259 ABC_Carb_Solutes_like 100.0 2.7E-36 5.8E-41 334.9 22.6 200 134-376 13-213 (213)
147 cd03263 ABC_subfamily_A The AB 100.0 3.3E-36 7.2E-41 336.0 23.5 213 828-1064 2-216 (220)
148 cd03296 ABC_CysA_sulfate_impor 100.0 7E-36 1.5E-40 337.5 26.3 210 134-382 15-225 (239)
149 PRK09493 glnQ glutamine ABC tr 100.0 5.4E-36 1.2E-40 338.7 25.4 214 827-1064 2-220 (240)
150 KOG0055 Multidrug/pheromone ex 100.0 1.1E-36 2.3E-41 385.4 21.5 225 86-383 986-1213(1228)
151 PRK11629 lolD lipoprotein tran 100.0 8.1E-36 1.8E-40 335.6 26.4 216 827-1064 6-229 (233)
152 cd03265 ABC_DrrA DrrA is the A 100.0 3.2E-36 7E-41 335.9 22.9 205 134-381 13-219 (220)
153 cd03292 ABC_FtsE_transporter F 100.0 3.6E-36 7.9E-41 334.2 23.2 205 828-1055 2-212 (214)
154 cd03226 ABC_cobalt_CbiO_domain 100.0 2.1E-36 4.6E-41 333.6 21.1 191 852-1058 13-204 (205)
155 PRK11174 cysteine/glutathione 100.0 4E-36 8.7E-41 383.4 26.8 206 135-383 364-572 (588)
156 PRK13643 cbiO cobalt transport 100.0 8.2E-36 1.8E-40 345.1 26.9 224 135-402 20-255 (288)
157 PRK13634 cbiO cobalt transport 100.0 6.5E-36 1.4E-40 346.3 26.0 218 134-394 20-249 (290)
158 PRK11264 putative amino-acid A 100.0 6.5E-36 1.4E-40 340.3 25.4 214 827-1064 4-228 (250)
159 PRK13637 cbiO cobalt transport 100.0 5.9E-36 1.3E-40 346.1 25.2 219 826-1064 2-229 (287)
160 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.1E-36 1.1E-40 339.2 24.2 213 828-1064 2-220 (242)
161 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.7E-36 1.2E-40 343.4 24.8 209 131-382 34-249 (269)
162 COG4988 CydD ABC-type transpor 100.0 3.6E-36 7.7E-41 355.9 23.7 206 135-383 335-543 (559)
163 PRK13637 cbiO cobalt transport 100.0 6.6E-36 1.4E-40 345.7 25.3 218 134-394 20-248 (287)
164 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.5E-36 1.2E-40 343.6 24.4 203 850-1064 35-245 (269)
165 COG1132 MdlB ABC-type multidru 100.0 2.9E-36 6.4E-41 382.5 24.4 253 49-383 297-552 (567)
166 PRK11248 tauB taurine transpor 100.0 9.2E-36 2E-40 338.8 25.8 212 827-1064 2-215 (255)
167 cd03224 ABC_TM1139_LivF_branch 100.0 4.9E-36 1.1E-40 335.1 23.0 199 852-1064 13-216 (222)
168 TIGR00960 3a0501s02 Type II (G 100.0 4.9E-36 1.1E-40 333.6 22.6 194 135-372 17-216 (216)
169 TIGR02315 ABC_phnC phosphonate 100.0 4E-36 8.6E-41 340.6 21.9 218 827-1065 2-231 (243)
170 PRK13647 cbiO cobalt transport 100.0 8.3E-36 1.8E-40 342.8 24.8 214 827-1064 5-222 (274)
171 COG0410 LivF ABC-type branched 100.0 4.3E-36 9.3E-41 317.6 20.2 213 827-1065 4-222 (237)
172 PRK11831 putative ABC transpor 100.0 1.3E-35 2.9E-40 340.6 25.9 215 826-1064 7-228 (269)
173 cd03264 ABC_drug_resistance_li 100.0 8E-36 1.7E-40 330.6 23.0 208 828-1062 2-211 (211)
174 cd03219 ABC_Mj1267_LivG_branch 100.0 7.5E-36 1.6E-40 336.8 23.2 215 134-382 13-231 (236)
175 cd03301 ABC_MalK_N The N-termi 100.0 8.4E-36 1.8E-40 331.0 23.0 200 134-376 13-213 (213)
176 cd03218 ABC_YhbG The ABC trans 100.0 8.5E-36 1.8E-40 335.5 23.3 205 134-382 13-221 (232)
177 cd03258 ABC_MetN_methionine_tr 100.0 1.1E-35 2.3E-40 334.9 24.0 205 135-382 19-229 (233)
178 PRK13650 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 341.6 25.7 215 135-393 21-242 (279)
179 PRK13634 cbiO cobalt transport 100.0 1E-35 2.2E-40 344.7 24.2 218 827-1064 3-230 (290)
180 TIGR03522 GldA_ABC_ATP gliding 100.0 7E-36 1.5E-40 347.8 23.0 205 134-383 15-221 (301)
181 cd03262 ABC_HisP_GlnQ_permease 100.0 9E-36 1.9E-40 330.8 22.8 205 828-1055 2-211 (213)
182 COG0411 LivG ABC-type branched 100.0 5E-36 1.1E-40 319.5 19.6 207 850-1065 15-235 (250)
183 PRK13647 cbiO cobalt transport 100.0 2.5E-35 5.5E-40 338.8 27.0 203 135-381 19-225 (274)
184 PRK10895 lipopolysaccharide AB 100.0 1.3E-35 2.9E-40 335.7 24.3 214 827-1064 4-221 (241)
185 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.3E-35 2.7E-40 331.1 23.6 200 134-378 17-218 (220)
186 PRK13651 cobalt transporter AT 100.0 1.3E-35 2.9E-40 344.7 24.6 218 827-1064 3-249 (305)
187 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-35 3E-40 333.0 24.0 217 827-1062 2-228 (228)
188 PRK10070 glycine betaine trans 100.0 1.4E-35 3E-40 353.2 25.4 207 133-382 40-253 (400)
189 COG4559 ABC-type hemin transpo 100.0 7.1E-36 1.5E-40 308.1 19.7 207 134-382 14-229 (259)
190 PRK10619 histidine/lysine/argi 100.0 2.2E-35 4.8E-40 337.0 25.9 214 826-1064 5-236 (257)
191 PRK10908 cell division protein 100.0 1.7E-35 3.8E-40 330.5 24.6 206 827-1055 2-213 (222)
192 PRK13651 cobalt transporter AT 100.0 1.6E-35 3.5E-40 344.0 25.1 204 135-382 21-253 (305)
193 cd03235 ABC_Metallic_Cations A 100.0 7.6E-36 1.6E-40 331.3 21.4 199 852-1062 12-213 (213)
194 PRK13631 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 344.9 26.2 217 134-394 39-279 (320)
195 PRK13631 cbiO cobalt transport 100.0 1.5E-35 3.4E-40 346.0 24.9 218 826-1064 21-260 (320)
196 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.3E-35 5E-40 332.6 25.4 212 827-1064 2-216 (236)
197 PRK09536 btuD corrinoid ABC tr 100.0 1.8E-35 3.9E-40 352.4 25.9 209 134-382 16-227 (402)
198 PRK13643 cbiO cobalt transport 100.0 1.6E-35 3.5E-40 342.6 24.8 218 827-1065 2-229 (288)
199 cd03225 ABC_cobalt_CbiO_domain 100.0 9.1E-36 2E-40 330.2 21.7 193 852-1055 14-210 (211)
200 TIGR00972 3a0107s01c2 phosphat 100.0 2.4E-35 5.3E-40 334.7 25.6 214 827-1064 2-227 (247)
201 PRK11831 putative ABC transpor 100.0 3.4E-35 7.5E-40 337.2 27.0 207 134-382 20-232 (269)
202 PRK13636 cbiO cobalt transport 100.0 2E-35 4.3E-40 341.2 25.0 216 826-1065 5-227 (283)
203 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-35 3.9E-40 335.8 24.0 206 826-1064 12-218 (257)
204 PRK13646 cbiO cobalt transport 100.0 1.9E-35 4E-40 342.0 24.5 218 826-1064 2-230 (286)
205 TIGR03415 ABC_choXWV_ATP choli 100.0 1.9E-35 4.2E-40 349.3 24.9 209 131-382 34-253 (382)
206 cd03263 ABC_subfamily_A The AB 100.0 1.2E-35 2.6E-40 331.5 21.8 203 134-381 15-219 (220)
207 cd03224 ABC_TM1139_LivF_branch 100.0 1.6E-35 3.4E-40 331.0 22.6 203 134-382 13-220 (222)
208 cd03256 ABC_PhnC_transporter A 100.0 1.9E-35 4.1E-40 334.7 23.6 214 134-382 14-233 (241)
209 COG4175 ProV ABC-type proline/ 100.0 6.3E-36 1.4E-40 325.0 18.7 223 132-405 39-268 (386)
210 PRK11629 lolD lipoprotein tran 100.0 4.6E-35 1E-39 329.5 26.5 201 134-378 22-229 (233)
211 cd03269 ABC_putative_ATPase Th 100.0 1.2E-35 2.6E-40 329.0 21.3 198 134-376 13-210 (210)
212 TIGR03740 galliderm_ABC gallid 100.0 3.5E-35 7.7E-40 328.2 25.3 197 852-1065 13-209 (223)
213 PRK11614 livF leucine/isoleuci 100.0 2.1E-35 4.6E-40 333.2 23.7 212 826-1064 5-221 (237)
214 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.3E-35 5E-40 333.8 23.9 206 134-382 14-224 (242)
215 PRK11124 artP arginine transpo 100.0 3.2E-35 7E-40 332.8 25.1 214 826-1064 2-225 (242)
216 KOG0058 Peptide exporter, ABC 100.0 3.1E-36 6.8E-41 362.1 17.6 215 825-1064 464-686 (716)
217 PRK13650 cbiO cobalt transport 100.0 2E-35 4.3E-40 340.5 23.7 216 826-1064 4-224 (279)
218 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-35 5.9E-40 328.8 24.0 210 827-1058 2-219 (221)
219 COG4559 ABC-type hemin transpo 100.0 8.7E-36 1.9E-40 307.4 18.3 214 827-1065 2-226 (259)
220 PRK11300 livG leucine/isoleuci 100.0 3.3E-35 7.3E-40 335.4 25.0 218 826-1065 5-239 (255)
221 PRK13644 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 339.0 24.0 213 827-1064 2-219 (274)
222 PRK09493 glnQ glutamine ABC tr 100.0 4.3E-35 9.3E-40 331.3 25.6 205 134-382 14-224 (240)
223 TIGR03005 ectoine_ehuA ectoine 100.0 3.3E-35 7.3E-40 334.6 24.9 213 828-1064 2-231 (252)
224 cd03260 ABC_PstB_phosphate_tra 100.0 1.2E-35 2.5E-40 333.2 20.7 204 134-380 13-226 (227)
225 PRK14247 phosphate ABC transpo 100.0 5E-35 1.1E-39 332.9 26.1 216 827-1064 4-229 (250)
226 PRK14268 phosphate ABC transpo 100.0 4.9E-35 1.1E-39 334.1 26.0 214 826-1064 12-237 (258)
227 PRK13641 cbiO cobalt transport 100.0 3.3E-35 7.1E-40 340.2 24.8 219 826-1064 2-229 (287)
228 COG4987 CydC ABC-type transpor 100.0 7E-36 1.5E-40 346.7 19.2 208 134-383 351-561 (573)
229 PRK15079 oligopeptide ABC tran 100.0 4.6E-35 1E-39 343.2 26.3 230 826-1065 8-247 (331)
230 TIGR01978 sufC FeS assembly AT 100.0 4.6E-35 9.9E-40 332.0 25.1 218 828-1064 2-229 (243)
231 PRK13646 cbiO cobalt transport 100.0 4.8E-35 1E-39 338.5 25.7 206 134-382 20-234 (286)
232 PRK11264 putative amino-acid A 100.0 4.9E-35 1.1E-39 333.1 25.3 204 135-382 17-232 (250)
233 PRK13652 cbiO cobalt transport 100.0 4.3E-35 9.4E-40 337.6 25.1 214 827-1064 4-222 (277)
234 COG2274 SunT ABC-type bacterio 100.0 1.2E-33 2.5E-38 355.3 40.0 216 821-1064 466-691 (709)
235 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.6E-35 7.8E-40 380.4 27.3 205 134-383 466-673 (686)
236 cd03226 ABC_cobalt_CbiO_domain 100.0 1.5E-35 3.3E-40 326.8 20.3 192 134-373 13-205 (205)
237 TIGR02315 ABC_phnC phosphonate 100.0 2.2E-35 4.8E-40 334.5 22.2 213 134-381 15-233 (243)
238 PRK14267 phosphate ABC transpo 100.0 5.9E-35 1.3E-39 332.9 25.8 217 826-1064 4-232 (253)
239 PRK14273 phosphate ABC transpo 100.0 5.8E-35 1.3E-39 333.1 25.7 215 826-1064 7-233 (254)
240 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-35 3.8E-40 329.6 20.9 195 134-372 17-218 (218)
241 PRK13548 hmuV hemin importer A 100.0 4.6E-35 9.9E-40 334.1 24.8 214 827-1065 3-226 (258)
242 PRK13635 cbiO cobalt transport 100.0 6.3E-35 1.4E-39 336.2 26.0 216 134-393 20-242 (279)
243 PRK13636 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 336.6 26.4 206 135-383 20-231 (283)
244 PRK13635 cbiO cobalt transport 100.0 4.2E-35 9.1E-40 337.6 24.2 214 827-1064 6-224 (279)
245 TIGR03411 urea_trans_UrtD urea 100.0 6.5E-35 1.4E-39 330.4 25.2 215 827-1064 3-226 (242)
246 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.2E-35 1.1E-39 329.7 24.2 206 134-383 14-221 (236)
247 PRK09473 oppD oligopeptide tra 100.0 9.3E-35 2E-39 340.9 27.2 214 134-383 29-251 (330)
248 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.3E-35 9.3E-40 324.8 23.0 194 857-1062 16-211 (211)
249 cd03234 ABCG_White The White s 100.0 5.7E-35 1.2E-39 327.2 24.1 203 134-376 20-226 (226)
250 cd03233 ABC_PDR_domain1 The pl 100.0 5.7E-35 1.2E-39 320.8 23.5 179 133-376 19-202 (202)
251 PRK15079 oligopeptide ABC tran 100.0 5.7E-35 1.2E-39 342.5 25.1 208 134-382 34-250 (331)
252 cd03267 ABC_NatA_like Similar 100.0 5.8E-35 1.2E-39 328.9 24.1 232 89-376 2-236 (236)
253 PRK13638 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 336.0 24.3 213 827-1064 2-220 (271)
254 cd03268 ABC_BcrA_bacitracin_re 100.0 2.7E-35 5.8E-40 325.7 20.8 195 134-376 13-208 (208)
255 PRK11248 tauB taurine transpor 100.0 1.1E-34 2.3E-39 330.1 26.1 201 134-379 14-216 (255)
256 cd03233 ABC_PDR_domain1 The pl 100.0 8E-35 1.7E-39 319.6 24.2 196 826-1062 3-202 (202)
257 PRK11231 fecE iron-dicitrate t 100.0 5.6E-35 1.2E-39 333.3 23.8 217 827-1065 3-223 (255)
258 cd03266 ABC_NatA_sodium_export 100.0 3.1E-35 6.7E-40 327.7 21.0 198 135-376 19-218 (218)
259 COG4525 TauB ABC-type taurine 100.0 3E-35 6.4E-40 298.8 18.8 200 852-1064 18-219 (259)
260 PRK09984 phosphonate/organopho 100.0 7.4E-35 1.6E-39 333.6 24.4 220 826-1065 4-238 (262)
261 PRK10070 glycine betaine trans 100.0 5.8E-35 1.3E-39 347.9 24.3 201 852-1064 41-249 (400)
262 COG0444 DppD ABC-type dipeptid 100.0 1.1E-34 2.3E-39 323.0 24.8 215 133-382 17-242 (316)
263 PRK14245 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 329.3 26.2 219 826-1064 3-229 (250)
264 PRK14241 phosphate transporter 100.0 1.2E-34 2.5E-39 331.2 25.8 217 826-1064 4-237 (258)
265 PRK13649 cbiO cobalt transport 100.0 9E-35 2E-39 336.1 25.2 218 826-1064 2-229 (280)
266 PRK10253 iron-enterobactin tra 100.0 7E-35 1.5E-39 334.1 24.0 218 826-1065 7-229 (265)
267 PRK11247 ssuB aliphatic sulfon 100.0 8.5E-35 1.8E-39 330.2 24.5 194 135-379 26-219 (257)
268 cd03232 ABC_PDR_domain2 The pl 100.0 7E-35 1.5E-39 317.6 22.8 190 826-1062 3-192 (192)
269 PRK14242 phosphate transporter 100.0 1.4E-34 3E-39 329.9 26.2 219 826-1064 6-232 (253)
270 PRK11022 dppD dipeptide transp 100.0 1.3E-34 2.9E-39 339.4 26.5 214 134-383 20-243 (326)
271 TIGR02673 FtsE cell division A 100.0 9.1E-35 2E-39 323.0 23.7 194 134-371 15-214 (214)
272 PRK11614 livF leucine/isoleuci 100.0 9.6E-35 2.1E-39 327.9 24.2 203 134-382 18-225 (237)
273 TIGR02769 nickel_nikE nickel i 100.0 1.2E-34 2.6E-39 332.2 25.3 223 827-1064 3-235 (265)
274 cd03300 ABC_PotA_N PotA is an 100.0 1.3E-34 2.8E-39 325.5 25.1 212 828-1064 2-215 (232)
275 PRK10584 putative ABC transpor 100.0 1.5E-34 3.2E-39 324.4 25.4 212 826-1059 6-225 (228)
276 PRK10575 iron-hydroxamate tran 100.0 8.6E-35 1.9E-39 333.3 23.9 218 826-1065 11-233 (265)
277 TIGR01184 ntrCD nitrate transp 100.0 6.4E-35 1.4E-39 327.2 22.3 198 855-1064 1-199 (230)
278 cd03264 ABC_drug_resistance_li 100.0 4E-35 8.7E-40 325.0 20.4 197 134-376 13-211 (211)
279 TIGR02211 LolD_lipo_ex lipopro 100.0 1.3E-34 2.9E-39 323.3 24.8 196 134-373 18-220 (221)
280 PRK13639 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 333.7 24.9 214 827-1064 2-221 (275)
281 PRK11308 dppF dipeptide transp 100.0 2.1E-34 4.6E-39 337.5 27.4 208 134-383 28-244 (327)
282 PRK10744 pstB phosphate transp 100.0 1.5E-34 3.3E-39 330.5 25.6 217 824-1064 11-239 (260)
283 PRK13632 cbiO cobalt transport 100.0 1.1E-34 2.5E-39 333.2 24.7 215 826-1064 7-226 (271)
284 PRK10790 putative multidrug tr 100.0 8.5E-35 1.8E-39 371.3 26.2 206 135-383 355-563 (592)
285 COG1245 Predicted ATPase, RNas 100.0 3.2E-34 7E-39 323.7 27.6 170 858-1053 360-530 (591)
286 PRK13633 cobalt transporter AT 100.0 1.5E-34 3.3E-39 333.6 25.8 205 134-382 23-232 (280)
287 TIGR03410 urea_trans_UrtE urea 100.0 8.9E-35 1.9E-39 326.7 23.2 210 828-1065 2-217 (230)
288 TIGR03375 type_I_sec_LssB type 100.0 6.7E-35 1.5E-39 378.3 25.4 255 48-383 429-688 (694)
289 TIGR03873 F420-0_ABC_ATP propo 100.0 9.4E-35 2E-39 331.6 23.6 217 827-1065 2-222 (256)
290 COG4988 CydD ABC-type transpor 100.0 4.3E-35 9.3E-40 346.8 21.3 213 823-1064 317-538 (559)
291 PRK13652 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 332.3 26.2 205 135-382 18-226 (277)
292 PRK10895 lipopolysaccharide AB 100.0 8E-35 1.7E-39 329.3 22.6 206 134-382 16-225 (241)
293 PRK13632 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 332.3 25.0 205 134-382 22-230 (271)
294 PRK13549 xylose transporter AT 100.0 1.1E-34 2.5E-39 362.5 26.1 220 827-1066 6-229 (506)
295 TIGR03005 ectoine_ehuA ectoine 100.0 1.8E-34 4E-39 328.6 25.4 206 134-382 13-235 (252)
296 TIGR00972 3a0107s01c2 phosphat 100.0 2.3E-34 5E-39 326.7 26.1 206 135-382 15-231 (247)
297 KOG0066 eIF2-interacting prote 100.0 3.4E-34 7.4E-39 318.8 26.6 198 826-1063 586-785 (807)
298 PRK14237 phosphate transporter 100.0 2.7E-34 5.7E-39 329.5 26.8 222 823-1064 17-246 (267)
299 PRK14235 phosphate transporter 100.0 2E-34 4.4E-39 330.4 25.7 220 826-1064 19-246 (267)
300 TIGR03415 ABC_choXWV_ATP choli 100.0 1.2E-34 2.6E-39 342.7 24.4 204 850-1065 35-250 (382)
301 PRK14256 phosphate ABC transpo 100.0 3.6E-34 7.8E-39 326.1 27.6 220 826-1064 4-231 (252)
302 PRK13648 cbiO cobalt transport 100.0 1.8E-34 3.9E-39 331.4 25.1 216 826-1065 7-227 (269)
303 TIGR00968 3a0106s01 sulfate AB 100.0 1.9E-34 4.2E-39 325.0 24.9 212 828-1064 2-215 (237)
304 PRK11144 modC molybdate transp 100.0 8.6E-35 1.9E-39 344.9 23.1 195 139-382 16-217 (352)
305 PRK11022 dppD dipeptide transp 100.0 2.9E-34 6.2E-39 336.6 27.2 223 827-1064 4-238 (326)
306 PRK00635 excinuclease ABC subu 100.0 3.5E-33 7.6E-38 371.7 40.8 135 923-1065 759-902 (1809)
307 PRK13641 cbiO cobalt transport 100.0 1E-34 2.2E-39 336.0 23.0 205 134-382 20-233 (287)
308 cd03292 ABC_FtsE_transporter F 100.0 6.9E-35 1.5E-39 324.0 20.7 195 134-372 14-214 (214)
309 TIGR03410 urea_trans_UrtE urea 100.0 1E-34 2.2E-39 326.3 22.1 202 134-381 13-219 (230)
310 PRK10619 histidine/lysine/argi 100.0 2.3E-34 5E-39 328.6 25.3 205 134-382 18-240 (257)
311 TIGR03608 L_ocin_972_ABC putat 100.0 1.1E-34 2.4E-39 320.4 22.0 189 852-1052 11-206 (206)
312 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-34 3.9E-39 320.1 23.8 198 854-1063 13-212 (213)
313 cd03267 ABC_NatA_like Similar 100.0 1.8E-34 3.8E-39 325.0 24.0 201 850-1062 32-236 (236)
314 PRK13640 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 333.7 24.0 217 826-1064 5-227 (282)
315 PRK00349 uvrA excinuclease ABC 100.0 2.2E-33 4.7E-38 361.5 37.2 123 926-1064 791-922 (943)
316 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-35 1.5E-39 379.5 23.7 206 134-383 492-700 (710)
317 PRK11176 lipid transporter ATP 100.0 5.3E-35 1.1E-39 372.9 22.1 209 134-383 356-567 (582)
318 PRK14269 phosphate ABC transpo 100.0 2.3E-34 5E-39 326.4 24.9 219 827-1064 3-225 (246)
319 PRK13547 hmuV hemin importer A 100.0 1.6E-34 3.5E-39 330.7 23.8 219 827-1065 2-240 (272)
320 PRK11308 dppF dipeptide transp 100.0 2.9E-34 6.2E-39 336.4 26.3 226 826-1065 5-240 (327)
321 PRK13648 cbiO cobalt transport 100.0 3.1E-34 6.8E-39 329.4 26.1 204 135-382 23-230 (269)
322 PRK13639 cbiO cobalt transport 100.0 4.1E-34 8.9E-39 329.1 27.1 204 135-382 16-225 (275)
323 PRK14250 phosphate ABC transpo 100.0 2.8E-34 6E-39 324.6 25.2 200 135-382 17-220 (241)
324 PRK13644 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 333.6 22.1 203 135-382 16-223 (274)
325 PRK14273 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 327.1 25.8 206 135-382 21-237 (254)
326 PRK14268 phosphate ABC transpo 100.0 3.3E-34 7E-39 327.4 26.0 206 134-382 25-241 (258)
327 PRK09473 oppD oligopeptide tra 100.0 3.1E-34 6.7E-39 336.5 26.3 225 826-1065 12-247 (330)
328 PRK13645 cbiO cobalt transport 100.0 2E-34 4.2E-39 334.4 24.3 219 826-1064 6-235 (289)
329 PRK13548 hmuV hemin importer A 100.0 1.6E-34 3.5E-39 329.5 23.2 206 134-382 15-229 (258)
330 COG4618 ArpD ABC-type protease 100.0 9.1E-35 2E-39 333.9 20.9 235 78-385 325-562 (580)
331 PRK13640 cbiO cobalt transport 100.0 3E-34 6.5E-39 331.3 25.4 208 135-383 21-232 (282)
332 TIGR02142 modC_ABC molybdenum 100.0 1.7E-34 3.7E-39 343.0 24.0 199 139-382 15-220 (354)
333 PRK13633 cobalt transporter AT 100.0 2E-34 4.3E-39 332.6 23.9 218 827-1064 5-228 (280)
334 cd03257 ABC_NikE_OppD_transpor 100.0 2E-34 4.3E-39 323.6 23.2 201 135-376 19-228 (228)
335 PRK14257 phosphate ABC transpo 100.0 3.1E-34 6.6E-39 336.1 25.7 211 134-382 95-312 (329)
336 PRK11160 cysteine/glutathione 100.0 1.3E-34 2.8E-39 366.8 24.4 206 135-383 354-562 (574)
337 PRK14259 phosphate ABC transpo 100.0 2.9E-34 6.3E-39 329.3 24.7 214 826-1064 13-248 (269)
338 PRK14250 phosphate ABC transpo 100.0 1.9E-34 4E-39 326.0 22.8 209 826-1064 3-216 (241)
339 cd03299 ABC_ModC_like Archeal 100.0 3.5E-34 7.7E-39 322.5 24.9 199 854-1064 14-214 (235)
340 TIGR01193 bacteriocin_ABC ABC- 100.0 1.4E-34 3.1E-39 376.1 24.9 207 135-383 488-697 (708)
341 PRK11124 artP arginine transpo 100.0 3.1E-34 6.8E-39 324.7 24.3 203 135-381 16-228 (242)
342 PRK10584 putative ABC transpor 100.0 5E-34 1.1E-38 320.2 25.7 197 135-375 24-227 (228)
343 PRK10771 thiQ thiamine transpo 100.0 2.7E-34 5.9E-39 323.0 23.6 211 827-1064 2-214 (232)
344 COG4525 TauB ABC-type taurine 100.0 2E-34 4.4E-39 292.7 20.1 205 134-383 18-224 (259)
345 TIGR03411 urea_trans_UrtD urea 100.0 2.7E-34 5.9E-39 325.3 23.6 212 134-382 15-230 (242)
346 PRK10575 iron-hydroxamate tran 100.0 3.2E-34 7E-39 328.6 24.4 210 134-382 24-236 (265)
347 TIGR00958 3a01208 Conjugate Tr 100.0 1.8E-34 3.9E-39 373.5 25.1 206 134-383 494-702 (711)
348 KOG0057 Mitochondrial Fe/S clu 100.0 8E-35 1.7E-39 338.0 19.4 211 824-1064 349-569 (591)
349 PRK14242 phosphate transporter 100.0 5.5E-34 1.2E-38 325.0 26.1 207 135-382 20-236 (253)
350 cd03213 ABCG_EPDR ABCG transpo 100.0 3.3E-34 7.3E-39 312.7 23.2 190 826-1062 3-194 (194)
351 PRK14239 phosphate transporter 100.0 4.7E-34 1E-38 325.4 25.5 215 826-1064 5-231 (252)
352 TIGR02770 nickel_nikD nickel i 100.0 2.6E-34 5.6E-39 322.6 23.0 204 136-382 1-214 (230)
353 PRK11300 livG leucine/isoleuci 100.0 2.6E-34 5.5E-39 328.2 23.3 221 134-382 18-242 (255)
354 TIGR02769 nickel_nikE nickel i 100.0 3.4E-34 7.3E-39 328.4 24.3 207 134-382 24-239 (265)
355 PRK14274 phosphate ABC transpo 100.0 4.6E-34 1E-38 326.5 25.4 219 826-1064 12-238 (259)
356 PRK10908 cell division protein 100.0 2E-34 4.4E-39 321.9 21.9 196 134-373 15-216 (222)
357 PRK15093 antimicrobial peptide 100.0 5.1E-34 1.1E-38 335.7 26.4 225 827-1064 4-243 (330)
358 PRK14270 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 324.7 25.4 215 826-1064 4-230 (251)
359 TIGR01184 ntrCD nitrate transp 100.0 2.3E-34 4.9E-39 322.8 22.1 202 137-381 1-202 (230)
360 PRK14244 phosphate ABC transpo 100.0 4.6E-34 9.9E-39 325.1 24.9 219 827-1064 6-232 (251)
361 PRK11144 modC molybdate transp 100.0 3.2E-34 6.9E-39 340.1 24.5 190 857-1064 16-213 (352)
362 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-34 4.3E-39 319.5 21.2 194 134-371 14-211 (211)
363 TIGR02142 modC_ABC molybdenum 100.0 3.5E-34 7.7E-39 340.3 24.7 194 857-1064 15-216 (354)
364 PRK15112 antimicrobial peptide 100.0 3.7E-34 8E-39 328.3 24.0 223 827-1064 5-234 (267)
365 PRK14267 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 325.0 25.3 212 135-382 18-236 (253)
366 cd03297 ABC_ModC_molybdenum_tr 100.0 3.9E-34 8.5E-39 317.7 23.4 191 857-1062 16-214 (214)
367 PRK13638 cbiO cobalt transport 100.0 3.6E-34 7.8E-39 329.3 23.9 205 134-382 14-224 (271)
368 PRK14258 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 325.6 25.6 221 826-1064 7-240 (261)
369 PRK14240 phosphate transporter 100.0 6.2E-34 1.3E-38 323.9 25.5 215 826-1064 3-229 (250)
370 cd03300 ABC_PotA_N PotA is an 100.0 4.5E-34 9.6E-39 321.1 24.1 206 134-382 13-219 (232)
371 PRK15093 antimicrobial peptide 100.0 6.6E-34 1.4E-38 334.7 26.5 217 134-382 20-247 (330)
372 PRK10253 iron-enterobactin tra 100.0 4.8E-34 1E-38 327.1 24.7 210 134-382 20-232 (265)
373 PRK14262 phosphate ABC transpo 100.0 6.3E-34 1.4E-38 323.9 25.4 218 827-1064 4-229 (250)
374 TIGR00968 3a0106s01 sulfate AB 100.0 7.4E-34 1.6E-38 320.3 25.7 206 134-382 13-219 (237)
375 TIGR03740 galliderm_ABC gallid 100.0 3.5E-34 7.6E-39 320.2 22.8 197 134-379 13-209 (223)
376 PRK14253 phosphate ABC transpo 100.0 6.3E-34 1.4E-38 323.7 25.1 219 826-1064 3-228 (249)
377 PRK14260 phosphate ABC transpo 100.0 6.6E-34 1.4E-38 325.0 25.4 216 826-1064 7-238 (259)
378 PRK10771 thiQ thiamine transpo 100.0 6.9E-34 1.5E-38 319.7 25.1 201 139-382 17-218 (232)
379 PRK13645 cbiO cobalt transport 100.0 5.8E-34 1.3E-38 330.5 25.2 205 135-382 25-239 (289)
380 PRK14257 phosphate ABC transpo 100.0 6.8E-34 1.5E-38 333.2 25.9 220 826-1064 80-308 (329)
381 PRK11231 fecE iron-dicitrate t 100.0 5.1E-34 1.1E-38 325.4 24.2 209 134-382 15-226 (255)
382 PRK14247 phosphate ABC transpo 100.0 4.1E-34 8.8E-39 325.4 23.3 213 134-382 16-233 (250)
383 PRK13649 cbiO cobalt transport 100.0 6.3E-34 1.4E-38 329.0 25.2 204 135-382 21-233 (280)
384 cd03235 ABC_Metallic_Cations A 100.0 1.8E-34 3.9E-39 320.3 19.7 200 134-376 12-213 (213)
385 TIGR03873 F420-0_ABC_ATP propo 100.0 6.3E-34 1.4E-38 324.8 24.6 208 134-382 14-225 (256)
386 COG4181 Predicted ABC-type tra 100.0 2E-34 4.3E-39 286.8 17.6 197 850-1059 21-225 (228)
387 PRK10762 D-ribose transporter 100.0 4.8E-34 1E-38 356.4 25.7 218 827-1066 5-227 (501)
388 PRK13642 cbiO cobalt transport 100.0 6E-34 1.3E-38 328.1 24.5 216 826-1064 4-224 (277)
389 PRK13642 cbiO cobalt transport 100.0 9.9E-34 2.2E-38 326.3 26.3 205 134-382 20-228 (277)
390 PRK14235 phosphate transporter 100.0 1.1E-33 2.4E-38 324.3 26.6 211 135-382 33-250 (267)
391 PRK09984 phosphonate/organopho 100.0 6.5E-34 1.4E-38 325.8 24.6 216 134-381 17-240 (262)
392 PRK10744 pstB phosphate transp 100.0 8.8E-34 1.9E-38 324.2 25.6 210 135-382 27-243 (260)
393 TIGR02770 nickel_nikD nickel i 100.0 4.5E-34 9.7E-39 320.7 22.6 201 854-1064 1-210 (230)
394 cd03299 ABC_ModC_like Archeal 100.0 7.3E-34 1.6E-38 319.9 24.4 204 136-382 14-218 (235)
395 PRK14272 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 322.3 26.2 216 826-1064 4-231 (252)
396 TIGR02982 heterocyst_DevA ABC 100.0 6.6E-34 1.4E-38 317.2 23.7 209 827-1055 2-217 (220)
397 COG4152 ABC-type uncharacteriz 100.0 1.9E-34 4.2E-39 303.2 17.9 213 128-385 9-221 (300)
398 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.9E-34 1.1E-38 316.3 22.1 195 139-376 16-211 (211)
399 PRK14236 phosphate transporter 100.0 1.2E-33 2.7E-38 324.8 26.2 219 826-1064 25-251 (272)
400 PRK14237 phosphate transporter 100.0 2E-33 4.3E-38 322.3 27.5 211 134-382 33-250 (267)
401 PTZ00265 multidrug resistance 100.0 2.6E-34 5.5E-39 391.2 23.7 213 134-383 1181-1452(1466)
402 PRK14249 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 321.4 25.7 219 826-1064 4-230 (251)
403 PRK09700 D-allose transporter 100.0 5.9E-34 1.3E-38 356.6 25.1 218 827-1066 6-231 (510)
404 TIGR01978 sufC FeS assembly AT 100.0 8E-34 1.7E-38 321.8 23.5 213 134-382 13-233 (243)
405 PRK14261 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 321.7 25.3 219 826-1064 6-232 (253)
406 PRK11701 phnK phosphonate C-P 100.0 1.2E-33 2.6E-38 322.9 25.0 215 826-1064 6-236 (258)
407 PRK14245 phosphate ABC transpo 100.0 1.4E-33 3E-38 320.9 25.4 210 134-382 16-233 (250)
408 PRK10418 nikD nickel transport 100.0 1.4E-33 3.1E-38 321.3 25.5 213 826-1064 4-225 (254)
409 PRK14270 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 320.1 26.3 211 134-382 17-234 (251)
410 PRK14256 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 320.2 26.2 212 134-382 17-235 (252)
411 PRK14275 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 326.1 25.4 215 826-1064 39-265 (286)
412 PRK14263 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 321.1 25.9 218 826-1064 8-240 (261)
413 cd03262 ABC_HisP_GlnQ_permease 100.0 4E-34 8.6E-39 317.7 19.9 195 134-372 13-213 (213)
414 PRK15112 antimicrobial peptide 100.0 9.5E-34 2.1E-38 324.9 23.7 207 134-382 26-238 (267)
415 PRK14271 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 323.9 25.7 219 826-1064 21-246 (276)
416 PRK13543 cytochrome c biogenes 100.0 1E-33 2.3E-38 314.0 23.1 202 826-1054 11-212 (214)
417 PRK14248 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 323.9 25.0 215 826-1064 21-247 (268)
418 PRK14251 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 320.1 25.4 215 826-1064 4-230 (251)
419 PRK10418 nikD nickel transport 100.0 2.7E-33 5.8E-38 319.1 26.6 203 135-382 17-229 (254)
420 COG0444 DppD ABC-type dipeptid 100.0 1.6E-33 3.4E-38 313.7 24.0 224 827-1064 2-238 (316)
421 PRK14269 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 318.8 25.2 209 134-382 15-229 (246)
422 PRK13538 cytochrome c biogenes 100.0 9.4E-34 2E-38 312.1 21.8 199 827-1052 2-202 (204)
423 PRK10419 nikE nickel transport 100.0 1.9E-33 4.1E-38 322.4 25.0 225 827-1066 4-238 (268)
424 cd03231 ABC_CcmA_heme_exporter 100.0 8.1E-34 1.7E-38 311.7 21.0 184 852-1052 13-198 (201)
425 TIGR01842 type_I_sec_PrtD type 100.0 1.7E-33 3.7E-38 355.3 27.0 209 134-383 331-542 (544)
426 PRK14255 phosphate ABC transpo 100.0 2.8E-33 6E-38 319.0 26.1 219 826-1064 5-231 (252)
427 PRK14239 phosphate transporter 100.0 3.1E-33 6.8E-38 318.6 26.4 210 135-382 19-235 (252)
428 TIGR02633 xylG D-xylose ABC tr 100.0 1.6E-33 3.4E-38 352.2 26.2 220 827-1066 2-227 (500)
429 cd03297 ABC_ModC_molybdenum_tr 100.0 1.4E-33 3.1E-38 313.2 22.9 192 139-376 16-214 (214)
430 PRK14274 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 320.2 25.7 210 135-382 26-242 (259)
431 PRK14241 phosphate transporter 100.0 1.2E-33 2.5E-38 323.0 22.7 211 135-382 18-241 (258)
432 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-33 3.7E-38 358.7 26.8 207 135-383 349-558 (588)
433 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-33 3.7E-38 312.3 23.2 199 136-377 13-212 (213)
434 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.9E-33 4E-38 313.9 23.6 192 850-1062 33-224 (224)
435 PRK11174 cysteine/glutathione 100.0 6.1E-34 1.3E-38 363.4 22.5 210 825-1064 348-567 (588)
436 cd03252 ABCC_Hemolysin The ABC 100.0 3.9E-34 8.4E-39 323.0 18.3 209 828-1064 2-220 (237)
437 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-33 2.9E-38 352.5 25.0 211 826-1065 11-225 (510)
438 PRK15056 manganese/iron transp 100.0 1.7E-33 3.7E-38 323.7 23.8 218 826-1065 6-226 (272)
439 COG4175 ProV ABC-type proline/ 100.0 3.5E-34 7.5E-39 311.5 16.7 202 852-1065 41-250 (386)
440 PRK14238 phosphate transporter 100.0 2.3E-33 5E-38 322.2 24.5 215 826-1064 24-250 (271)
441 PRK14259 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 322.1 24.2 206 135-383 27-253 (269)
442 PRK14240 phosphate transporter 100.0 3.4E-33 7.3E-38 317.9 25.5 210 135-382 17-233 (250)
443 cd03230 ABC_DR_subfamily_A Thi 100.0 1.4E-33 3E-38 302.3 20.9 168 828-1055 2-171 (173)
444 PRK14262 phosphate ABC transpo 100.0 3.7E-33 8.1E-38 317.5 25.6 211 134-382 16-233 (250)
445 CHL00131 ycf16 sulfate ABC tra 100.0 4.4E-33 9.5E-38 317.4 26.2 220 826-1064 7-236 (252)
446 PRK14265 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 321.2 25.1 218 826-1064 20-253 (274)
447 PRK14254 phosphate ABC transpo 100.0 3.7E-33 8.1E-38 322.2 25.6 213 826-1064 39-264 (285)
448 PRK11701 phnK phosphonate C-P 100.0 2.7E-33 5.7E-38 320.0 24.0 207 134-382 19-240 (258)
449 PRK14248 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 318.6 27.1 207 135-382 35-251 (268)
450 PRK11288 araG L-arabinose tran 100.0 2.4E-33 5.2E-38 350.2 25.5 216 827-1064 5-224 (501)
451 TIGR00630 uvra excinuclease AB 100.0 4.3E-32 9.3E-37 349.0 37.6 123 926-1064 789-920 (924)
452 COG4181 Predicted ABC-type tra 100.0 1.5E-33 3.3E-38 280.5 18.8 201 130-374 19-226 (228)
453 PRK14244 phosphate ABC transpo 100.0 4.2E-33 9.1E-38 317.2 25.1 212 134-382 18-236 (251)
454 PRK10789 putative multidrug tr 100.0 2.2E-33 4.7E-38 355.6 25.1 207 135-383 329-538 (569)
455 COG4987 CydC ABC-type transpor 100.0 4.1E-34 9E-39 332.0 16.8 212 826-1065 336-557 (573)
456 PRK14249 phosphate ABC transpo 100.0 7E-33 1.5E-37 315.4 26.6 211 134-382 17-234 (251)
457 PRK14251 phosphate ABC transpo 100.0 4.8E-33 1E-37 316.8 25.0 211 134-382 17-234 (251)
458 PRK14243 phosphate transporter 100.0 3.8E-33 8.2E-38 319.4 24.2 218 826-1064 10-243 (264)
459 TIGR02323 CP_lyasePhnK phospho 100.0 4E-33 8.8E-38 317.8 24.3 214 827-1064 4-233 (253)
460 PRK10247 putative ABC transpor 100.0 2.3E-33 5E-38 313.7 21.9 209 826-1062 7-220 (225)
461 TIGR01846 type_I_sec_HlyB type 100.0 2.1E-33 4.6E-38 364.0 24.8 256 48-383 422-680 (694)
462 PRK10982 galactose/methyl gala 100.0 2.3E-33 5E-38 349.7 24.1 206 852-1066 11-220 (491)
463 PRK14246 phosphate ABC transpo 100.0 6E-33 1.3E-37 316.1 25.5 215 827-1064 11-236 (257)
464 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-33 2.7E-38 366.0 22.6 208 826-1064 451-668 (686)
465 PRK03695 vitamin B12-transport 100.0 3.3E-33 7.2E-38 316.8 23.2 198 854-1065 11-218 (248)
466 PRK14266 phosphate ABC transpo 100.0 5.2E-33 1.1E-37 316.4 24.8 219 826-1064 3-229 (250)
467 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-33 2.8E-38 322.5 19.9 211 826-1065 2-221 (275)
468 COG5265 ATM1 ABC-type transpor 100.0 5E-34 1.1E-38 320.8 16.0 208 134-383 276-486 (497)
469 PRK14275 phosphate ABC transpo 100.0 7.1E-33 1.5E-37 320.3 26.0 203 135-382 53-269 (286)
470 PRK13547 hmuV hemin importer A 100.0 3.2E-33 7E-38 320.0 22.8 213 134-382 14-243 (272)
471 cd03245 ABCC_bacteriocin_expor 100.0 1.6E-33 3.4E-38 314.4 19.7 209 827-1062 3-220 (220)
472 PRK14263 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 318.8 22.9 211 132-382 19-244 (261)
473 PRK13546 teichoic acids export 100.0 9.9E-33 2.1E-37 314.3 26.6 219 825-1065 3-228 (264)
474 TIGR01166 cbiO cobalt transpor 100.0 2E-33 4.4E-38 306.0 20.1 178 852-1039 5-188 (190)
475 COG1123 ATPase components of v 100.0 8.2E-33 1.8E-37 329.4 26.8 211 132-383 302-519 (539)
476 cd03252 ABCC_Hemolysin The ABC 100.0 2.9E-33 6.4E-38 315.9 21.9 206 134-383 15-225 (237)
477 TIGR02203 MsbA_lipidA lipid A 100.0 1.4E-33 3.1E-38 359.3 21.8 208 135-383 346-556 (571)
478 PRK14272 phosphate ABC transpo 100.0 4.2E-33 9.2E-38 317.5 23.3 208 134-382 17-235 (252)
479 cd03251 ABCC_MsbA MsbA is an e 100.0 9.8E-34 2.1E-38 319.2 17.7 195 853-1064 16-220 (234)
480 PRK13539 cytochrome c biogenes 100.0 2.9E-33 6.3E-38 308.8 21.1 198 827-1054 3-200 (207)
481 PRK09580 sufC cysteine desulfu 100.0 7.4E-33 1.6E-37 314.8 25.0 219 827-1064 2-230 (248)
482 PRK14261 phosphate ABC transpo 100.0 8.5E-33 1.8E-37 315.1 25.5 211 134-382 19-236 (253)
483 cd03213 ABCG_EPDR ABCG transpo 100.0 6.2E-33 1.3E-37 302.7 23.3 170 134-376 22-194 (194)
484 PRK14260 phosphate ABC transpo 100.0 7E-33 1.5E-37 316.6 24.7 210 135-382 21-242 (259)
485 PRK14258 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 315.2 26.3 212 135-382 21-244 (261)
486 PRK14271 phosphate ABC transpo 100.0 5E-33 1.1E-37 319.9 23.5 211 134-382 34-250 (276)
487 PRK14236 phosphate transporter 100.0 1.1E-32 2.4E-37 317.0 26.3 210 135-382 39-255 (272)
488 COG4604 CeuD ABC-type enteroch 100.0 3.8E-34 8.2E-39 291.5 12.4 215 128-383 8-225 (252)
489 PRK14265 phosphate ABC transpo 100.0 7.1E-33 1.5E-37 318.5 24.5 208 135-382 34-257 (274)
490 COG4148 ModC ABC-type molybdat 100.0 6.8E-34 1.5E-38 304.1 14.8 197 138-383 15-218 (352)
491 PRK14253 phosphate ABC transpo 100.0 4.3E-33 9.3E-38 316.8 22.1 211 134-382 16-232 (249)
492 cd03229 ABC_Class3 This class 100.0 2.7E-33 5.9E-38 301.4 19.4 170 828-1055 2-177 (178)
493 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.8E-33 8.1E-38 318.7 21.5 198 135-383 18-225 (275)
494 PRK03695 vitamin B12-transport 100.0 6E-33 1.3E-37 314.8 22.9 201 136-382 11-221 (248)
495 PRK11176 lipid transporter ATP 100.0 3.6E-33 7.8E-38 356.1 23.5 212 826-1064 341-562 (582)
496 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.5E-33 3.2E-38 318.5 17.7 196 852-1064 16-221 (238)
497 COG4604 CeuD ABC-type enteroch 100.0 2.6E-34 5.7E-39 292.7 10.3 205 850-1066 12-222 (252)
498 TIGR01192 chvA glucan exporter 100.0 7E-33 1.5E-37 351.4 25.9 207 135-383 349-558 (585)
499 PRK10419 nikE nickel transport 100.0 8.4E-33 1.8E-37 317.1 24.0 207 134-382 25-240 (268)
500 cd03254 ABCC_Glucan_exporter_l 100.0 1.7E-33 3.8E-38 316.1 18.0 211 826-1064 2-221 (229)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-251 Score=2312.35 Aligned_cols=1340 Identities=53% Similarity=0.919 Sum_probs=1249.9
Q ss_pred cchHHhhhHHHHhhCCChhhhhhcccccCCCCcceeecccCChHHhHHHHHHhhhhcccCHHHHHHHHHHHHhhcCCCCC
Q 047682 5 EDDEEALIWAALEKLPTYNRLKKGILTASTGAANEVDVHKLGLLERQRLIDKLVKVADVDNEQLLLKLKNRVDRVGISLP 84 (1425)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 84 (1425)
+||||+|+|||+|||||++| +.+..... .++|+.+++..+++.++++..+..++|+++++.++++|.+++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 45999999999999999999 55543211 179999999999999999999999999999999999999998 899
Q ss_pred ceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHH
Q 047682 85 EIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLL 164 (1425)
Q Consensus 85 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 164 (1425)
.++++++++.+++++..+ ||+.|...++++.++...+.. ++.+..||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999988755 999999998888877766654 44567899999999999999999999999999999
Q ss_pred HHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCC
Q 047682 165 LALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANI 244 (1425)
Q Consensus 165 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~ 244 (1425)
++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|.|||||||+|+++|++++.|++ +..|+|++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998877789999999999999999999999999999999999999999999999999987 666776642
Q ss_pred CCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCC
Q 047682 245 KPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLD 324 (1425)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD 324 (1425)
..+|++++.+||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHh
Q 047682 325 SSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQE 404 (1425)
Q Consensus 325 ~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~ 404 (1425)
++|+.+|++.||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||+||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHH
Q 047682 405 VTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLL 484 (1425)
Q Consensus 405 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~ 484 (1425)
+++++++.++|..+..++.+.+++||.+.|.+++.++++..+++.|+++.++++.++..+.|.++.|+|++.|..|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCc
Q 047682 485 MKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFY 564 (1425)
Q Consensus 485 ~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y 564 (1425)
++||.+.++++.++.+++++++|++|+++++ ++..++..+.|++||++++.++++++|+.++++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999985 55556777899999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 047682 565 PAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAM 644 (1425)
Q Consensus 565 ~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~ 644 (1425)
++|++.++.+++++|..++++++|.+|+||++|+.+++++||.+++++++.+++++++||+++++++++..|+.++++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCcccccCCC---------------CCCchhHHHhhcc
Q 047682 645 LVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNSWQKVLPN---------------STEPLGVEVLKSR 709 (1425)
Q Consensus 645 ~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~---------------~~~~~g~~~L~~~ 709 (1425)
+++.+++||+|+..+||+||+|++|+||++|+++++++|||++.+|.|.+.+ ...+.|..+++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 9999999999999999999999999999999999999999999999997221 1346788999998
Q ss_pred Ccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcceeecccccccccccCCCccccccCCCCCCCCcc
Q 047682 710 GFF-----TDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFG-SQAVISEESQSNECDNRTGGTLQLSTCGSSSSHLTQ 783 (1425)
Q Consensus 710 ~~~-----~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 783 (1425)
++. ...+|+|+++|+++|+.++|+++.++++.|+++.. .+.++..+....+..... .
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-----------------~ 753 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-----------------A 753 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh-----------------c
Confidence 888 78889999999999999999999999999999877 444444332221110000 0
Q ss_pred cccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEe
Q 047682 784 SDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFR 863 (1425)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 863 (1425)
. .... .+..+. .......++..|+++..++++||.|-+++|.+++.+| +++++|+||||.++
T Consensus 754 ------~------~~~~--~~~~~~-s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~k 815 (1391)
T KOG0065|consen 754 ------G------SSSE--IEKLDD-SSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFK 815 (1391)
T ss_pred ------c------cccc--cccccc-ccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEec
Confidence 0 0000 000000 0001244677888889999999999999998887776 67889999999999
Q ss_pred CCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCC
Q 047682 864 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPP 943 (1425)
Q Consensus 864 ~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~ 943 (1425)
||.++||||+||||||||||+||||+++|.++|+|.|||+|++++.++|++|||+|+|.|.+.+||||.|.|+|.||+|.
T Consensus 816 PG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~ 895 (1391)
T KOG0065|consen 816 PGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPK 895 (1391)
T ss_pred CCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCCCCHHHHHHHHHHHH
Q 047682 944 DVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVR 1022 (1425)
Q Consensus 944 ~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p-~illLDEPTsgLD~~~~~~i~~~l~ 1022 (1425)
+++.+++.++||++++.+||.+++|.+||.|| +|||.+|||||+||+||++|| .||||||||||||++++..|++++|
T Consensus 896 ~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lr 974 (1391)
T KOG0065|consen 896 EVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLR 974 (1391)
T ss_pred cCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999999 8999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCccCCCCCCCCcceEEecCchh
Q 047682 1023 NTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQ 1102 (1425)
Q Consensus 1023 ~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~ 1102 (1425)
+++++|+|||||+||||.++|+.||++++|++||++||+||+|++++++++||+++||++ ||+..||||||||+++.+.
T Consensus 975 kla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~ 1053 (1391)
T KOG0065|consen 975 KLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGA 1053 (1391)
T ss_pred HHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999886 5555699999999999988
Q ss_pred hhhccCCHHHHHhcCHHHHHHHHHHHHhcCCCCC-CCCCCCCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 047682 1103 ELALGVDFTDIYKGSELYRRNKALIEELSKPAPG-SRDLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTA 1181 (1425)
Q Consensus 1103 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~ 1181 (1425)
+...+.||+++|++|++|++++++++++++++++ ..+..++++|++|+|.|++.|+|||+++|||+|.|+.+|++++++
T Consensus 1054 ~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~ 1133 (1391)
T KOG0065|consen 1054 EASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIV 1133 (1391)
T ss_pred ccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 8888899999999999999999999999999988 778888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHH
Q 047682 1182 IALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVAVERAVFYREKAAGMYSSMAYAFAQVLIEIPH 1261 (1425)
Q Consensus 1182 ~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~ 1261 (1425)
.||++|++||++|+ +.|+++|.+|++|+++++.+.+++...+|.+..||.+++|||++||||+.+|++|++++|+||
T Consensus 1134 ~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~ 1210 (1391)
T KOG0065|consen 1134 AGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPY 1210 (1391)
T ss_pred HHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHH
Confidence 99999999999995 689999999999999999999998888899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhheecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCc
Q 047682 1262 VFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRI 1341 (1425)
Q Consensus 1262 ~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~i 1341 (1425)
.++++.+|.+|+|+|+||++++.+|+||++++++..++++++|||+.+++||.++|+++++++++++++||||++|++.|
T Consensus 1211 ~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~i 1290 (1391)
T KOG0065|consen 1211 NLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLI 1290 (1391)
T ss_pred HHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhCHHHHHHHHHHHHHhCCCcccccc---------CCCcHHHHHHhhhC----CCCcchhHHHHHHHHHHHH
Q 047682 1342 PIWWRWYYWANPIAWTLYGLVASQFGDIDDTRLE---------SGETVKQFLRSYFG----FKHDFLGVIAAVHVAFTVL 1408 (1425)
Q Consensus 1342 p~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~ 1408 (1425)
|.||+||||+||++|.++|++..++||.+..|.. +|.||++|+++++| +.++.......+.++|.++
T Consensus 1291 P~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~ 1370 (1391)
T KOG0065|consen 1291 PKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVA 1370 (1391)
T ss_pred cceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehH
Confidence 9999999999999999999999999999988853 34699999999999 9999999999999999999
Q ss_pred HHHHHHHHHHhhccccC
Q 047682 1409 FVFVFALGIKAFNFQRR 1425 (1425)
Q Consensus 1409 f~~~~~~~l~~~~~~~r 1425 (1425)
+.+++.+++||.|||||
T Consensus 1371 ~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1371 DAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.8e-234 Score=2324.39 Aligned_cols=1418 Identities=61% Similarity=1.061 Sum_probs=1264.0
Q ss_pred CCcchHHhhhHHHHhhCCChhhhhhcccccC-----CCC---cceeecccCChHHhHHHHHHhhhhcccCHHHHHHHHHH
Q 047682 3 RDEDDEEALIWAALEKLPTYNRLKKGILTAS-----TGA---ANEVDVHKLGLLERQRLIDKLVKVADVDNEQLLLKLKN 74 (1425)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (1425)
..|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++|+.+|++.+++|++++.++|+++++++.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 118 (1470)
T PLN03140 39 SVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRN 118 (1470)
T ss_pred cccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHh
Confidence 4678999999999999999999999999653 122 23699999999999999999999999999999999999
Q ss_pred HHhhcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEc
Q 047682 75 RVDRVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLG 154 (1425)
Q Consensus 75 ~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llG 154 (1425)
|.|++|+++|+++|+|+||+|++++.++++.+||++|...+.++.+.+..+...+++.+++||+|+||.++|||+++|+|
T Consensus 119 ~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llG 198 (1470)
T PLN03140 119 RIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLG 198 (1470)
T ss_pred hhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEc
Confidence 99999999999999999999999998899999999999999887776654433334456789999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhH
Q 047682 155 PPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVE 234 (1425)
Q Consensus 155 p~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 234 (1425)
|||||||||||+|+|+++|+.+++|+|++||+++++...++.++||+|+|.|++++||+|||.|+++|++.+.++++..+
T Consensus 199 pnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~ 278 (1470)
T PLN03140 199 PPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSE 278 (1470)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhh
Confidence 99999999999999999987778999999999998776678899999999999999999999999999887777777677
Q ss_pred hhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEe
Q 047682 235 LSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALAL 314 (1425)
Q Consensus 235 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~il 314 (1425)
..++|++.++.|+.+.|.++++.+.++.+.+..++.+++.+||++|+||.||++++++|||||||||+||++|+++|+++
T Consensus 279 ~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vl 358 (1470)
T PLN03140 279 LARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTL 358 (1470)
T ss_pred cCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEE
Confidence 78888888888888888899988877777788899999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCC
Q 047682 315 FMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPK 394 (1425)
Q Consensus 315 lLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~ 394 (1425)
||||||+|||+.++.++++.|+++++..++|+|+++|||.++++++||+|++|++|+++|+||++++.+||+++||+||+
T Consensus 359 llDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~ 438 (1470)
T PLN03140 359 FMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPE 438 (1470)
T ss_pred EEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999988778899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCCCCCCCCCCCCccccCCccCCHHHHH
Q 047682 395 RKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRTPFDKSKSHPAALTTKSYGINKKELL 474 (1425)
Q Consensus 395 ~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 474 (1425)
++|+|||+++++++++++++|.....|+++.++++++++|++++.++++.++++.|.++.+.++.....++|..++++|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 99999999999999888888877767777789999999999999988888877777766666666666678999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhHHHHHHHHHHHhHHHHHHHhhhcchh
Q 047682 475 KACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGALFFTIIMITFNGMAELSMSIAKLPV 554 (1425)
Q Consensus 475 ~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~v 554 (1425)
+.|+.|++++++||++.++.++++.+++|+++|++|++++++.....++..+.|++||+++++++++++++..++.++|+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~v 598 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPV 598 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999999999999999999999999987766556677889999999999999999999999999999
Q ss_pred hHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Q 047682 555 FYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMV 634 (1425)
Q Consensus 555 f~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~ 634 (1425)
|+|||+.+||++|+|++|++++++|+.++++++|++|+|||+|+++++++||.+++++++.+++++++|++++++++++.
T Consensus 599 f~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~ 678 (1470)
T PLN03140 599 FYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMI 678 (1470)
T ss_pred hHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCcccccC-CCCCCchhHHHhhccCccc
Q 047682 635 VANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNSWQKVL-PNSTEPLGVEVLKSRGFFT 713 (1425)
Q Consensus 635 ~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~-~~~~~~~g~~~L~~~~~~~ 713 (1425)
+|+.+++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+.+|.+.. .+...+.|..+|+.+|+..
T Consensus 679 ~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~ 758 (1470)
T PLN03140 679 IANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFT 758 (1470)
T ss_pred HHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCc
Confidence 999999999999999999999999999999999999999999999999999999887532 2335678999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcceeecccccccccccCCCccccccCCCCCCCCcccccchhhhh
Q 047682 714 DAYWYWLGMAGLAGSILLFNFGFILALSFLNPFG-SQAVISEESQSNECDNRTGGTLQLSTCGSSSSHLTQSDESRDNIR 792 (1425)
Q Consensus 714 ~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 792 (1425)
+++|+|++++++++++++|++++++++++.++.. ....++.+...............+..... ....... ...+
T Consensus 759 ~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~ 833 (1470)
T PLN03140 759 DKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADG---NNTREVA--IQRM 833 (1470)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccccccccc---ccccccc--cccc
Confidence 9999999999999999999999999999998655 32232211110000000000000000000 0000000 0000
Q ss_pred cccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEc
Q 047682 793 RRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMG 872 (1425)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 872 (1425)
........................++.+|+.|.+++|+|++|+++.+.+.+..+...+++.+|+|||++++||+++||||
T Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G 913 (1470)
T PLN03140 834 SNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMG 913 (1470)
T ss_pred ccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEEC
Confidence 00000000000000000011223456678899999999999999887765555544556789999999999999999999
Q ss_pred CCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHH
Q 047682 873 VSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRM 952 (1425)
Q Consensus 873 ~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~ 952 (1425)
|||||||||||+|+|+.++|..+|+|.+||.+.++..+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.+.+++++
T Consensus 914 ~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~ 993 (1470)
T PLN03140 914 VSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMM 993 (1470)
T ss_pred CCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 99999999999999998777789999999988765556778999999999999999999999999888876667777778
Q ss_pred HHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q 047682 953 FLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1032 (1425)
Q Consensus 953 ~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 1032 (1425)
.++++++.+||.+++|+.+|.+++++|||||||||+||++|+++|+||||||||||||+.++..+++.|++++++|+|||
T Consensus 994 ~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI 1073 (1470)
T PLN03140 994 FVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1073 (1470)
T ss_pred HHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 89999999999999999999988899999999999999999999999999999999999999999999999998899999
Q ss_pred EEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCccCCCCCCCCcceEEecCchhhhhccCCHHH
Q 047682 1033 CTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQELALGVDFTD 1112 (1425)
Q Consensus 1033 ~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~ 1112 (1425)
||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||||+++.+.+...+.||++
T Consensus 1074 ~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~ 1153 (1470)
T PLN03140 1074 CTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAE 1153 (1470)
T ss_pred EEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHH
Confidence 99999997789999999999988999999999999999999999998888899999999999999987665556679999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcc
Q 047682 1113 IYKGSELYRRNKALIEELSKPAPGSRDLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWD 1192 (1425)
Q Consensus 1113 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~ 1192 (1425)
.|++|++++++++.+++++.++++.++..++++|++++|+|+++|+||+++++||||.|+.+|+++++++|+++|++||+
T Consensus 1154 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~ 1233 (1470)
T PLN03140 1154 HYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWK 1233 (1470)
T ss_pred HHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999998888888877766666666677899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhh
Q 047682 1193 LGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVAVERAVFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVI 1272 (1425)
Q Consensus 1193 ~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i 1272 (1425)
++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++++|++|++++|+|+.++++++|++|
T Consensus 1234 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i 1313 (1470)
T PLN03140 1234 VGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLI 1313 (1470)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99877778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhC
Q 047682 1273 VYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWAN 1352 (1425)
Q Consensus 1273 ~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~s 1352 (1425)
+|||+||++++++||||+++++++.++++++|+++++++||.++|+.+++++++++++||||++|+++||+||+|+||+|
T Consensus 1314 ~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~is 1393 (1470)
T PLN03140 1314 VYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWIC 1393 (1470)
T ss_pred HHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccccccC----CCcHHHHHHhhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 047682 1353 PIAWTLYGLVASQFGDIDDTRLES----GETVKQFLRSYFGFKHDFLGVIAAVHVAFTVLFVFVFALGIKAFNFQRR 1425 (1425)
Q Consensus 1353 p~~y~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1425 (1425)
|++|+++|+++|||+|.+..|.++ ++++.+|++++|||+++++|++++++++|+++|++++++++|++|||||
T Consensus 1394 p~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1394 PVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999988766553 3578999999999999999999999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.6e-185 Score=1859.71 Aligned_cols=1288 Identities=30% Similarity=0.514 Sum_probs=1057.4
Q ss_pred cCHHHHHHHHHHHHhhcCCCCC--ceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeece
Q 047682 63 VDNEQLLLKLKNRVDRVGISLP--EIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDV 140 (1425)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 140 (1425)
.|.+++++...++.++.+...| +++|+|+||+|++ ...+....||+.|...++......... ..+++.+++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566666654444445554444 9999999999999 344566689999988776653332221 12334557799999
Q ss_pred EEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCCHHHHHH
Q 047682 141 NGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL-KLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMTVRETLA 217 (1425)
Q Consensus 141 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 217 (1425)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999999875432 2456999999999999999999999
Q ss_pred hhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 047682 218 FSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQ 297 (1425)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 297 (1425)
|+++++.+..+.+ ...+.+ ..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9987754221100 000000 11223567899999999999999999999999999
Q ss_pred hhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecC
Q 047682 298 RKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGP 377 (1425)
Q Consensus 298 rqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 377 (1425)
||||+||++|+.+|++++|||||+|||+.++.++++.|+++++..++|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876678999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCCCCCCC---
Q 047682 378 REHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRTPFDKS--- 454 (1425)
Q Consensus 378 ~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 454 (1425)
++++.+||+++||+||++.|+|||+++++++.++ +++... +...+.++++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987643 332221 12234678999999999887766655543221110
Q ss_pred ------------CCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 047682 455 ------------KSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTN 522 (1425)
Q Consensus 455 ------------~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~ 522 (1425)
+..+.....+.+..++++|++.|.+|+++..+||+..+..++++.+++|+++|++|++.+.+.. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0011122345688899999999999999999999999999999999999999999999875432 3
Q ss_pred ccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCH
Q 047682 523 GGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNV 602 (1425)
Q Consensus 523 ~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~ 602 (1425)
.....|++|+++++.++.++.++...+.+|++|+|||..++|++++|++++.++++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 34568999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHH
Q 047682 603 GRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAV 682 (1425)
Q Consensus 603 ~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 682 (1425)
++||.+++++++.+.+++++++++++++++..+|+.+++++++++++++||++++++||+||+|++|+||+.|+++|+++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccC--C----------------------CCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 047682 683 NEFLGNSWQKVL--P----------------------NSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFIL 738 (1425)
Q Consensus 683 nef~~~~~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l 738 (1425)
|||.+..+.|.. | +.....|.++|+. ++.....|+|.+++++++++++|.++.++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887731 1 0123478899985 33334568999999999999999999999
Q ss_pred HHHhcCCCC-CcceeecccccccccccCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCC
Q 047682 739 ALSFLNPFG-SQAVISEESQSNECDNRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSG 817 (1425)
Q Consensus 739 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1425)
++++.++.. ...++............. ..+.+....+..+....... . ...+...... . ..
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~e~~~~~~~~-~-~~~~~~~~~~--~--~~ 750 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKA------------GETSASNKNDIEAGEVLGST-D-LTDESDDVND--E--KD 750 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhc------------ccccccccccccccccCCCC-c-cccccccccc--c--cc
Confidence 999987544 222222111000000000 00000000000000000000 0 0000000000 0 00
Q ss_pred ccccccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEE
Q 047682 818 MVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITG 896 (1425)
Q Consensus 818 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G 896 (1425)
...+.....++|+|++|.++.+ ++++.+|+|||++++|||++|||||||||||||||+|+|+.++| +.+|
T Consensus 751 ~~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G 821 (1394)
T TIGR00956 751 MEKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGG 821 (1394)
T ss_pred ccccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCccee
Confidence 0000112358999999987421 23467999999999999999999999999999999999987644 4569
Q ss_pred EEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 047682 897 NIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGV 976 (1425)
Q Consensus 897 ~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 976 (1425)
+|.+||.+... .+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.++++++++++++++.++|.+++|+.+|.++.
T Consensus 822 ~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~ 900 (1394)
T TIGR00956 822 DRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE 900 (1394)
T ss_pred EEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC
Confidence 99999998753 46778999999999999999999999999998776667777788899999999999999999987643
Q ss_pred CcCCHHHHHHHHHHHHHhhCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 977 SGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+|||||||||+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++|
T Consensus 901 -~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~G 979 (1394)
T TIGR00956 901 -GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKG 979 (1394)
T ss_pred -CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCC
Confidence 899999999999999999997 999999999999999999999999998889999999999997778899999999998
Q ss_pred cEEEEECCCCCCchhHHHHHhhCCCCccCCCCCCCCcceEEecCchhhhhccCCHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 047682 1056 GYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQELALGVDFTDIYKGSELYRRNKALIEELSKPAP 1135 (1425)
Q Consensus 1056 g~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 1135 (1425)
|+++|+|+.+++++++++||+++ |+++||+++|||||+||+++...+.....||.+.|++|+++++..+.+++...+..
T Consensus 980 G~iv~~G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 1058 (1394)
T TIGR00956 980 GQTVYFGDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELS 1058 (1394)
T ss_pred CEEEEECCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccc
Confidence 89999999999889999999997 56679999999999999988654433446899999999988877666555443322
Q ss_pred CCC---CCCCCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHH
Q 047682 1136 GSR---DLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYT 1212 (1425)
Q Consensus 1136 ~~~---~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~ 1212 (1425)
... +....++|++|+++|+++|++|+++++||||.++.+|+++++++|+++|++||++++ ++++++|++|++|+
T Consensus 1059 ~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~ 1135 (1394)
T TIGR00956 1059 KAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFM 1135 (1394)
T ss_pred cCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHH
Confidence 111 111224689999999999999999999999999999999999999999999999987 47889999999999
Q ss_pred HHHHHHHHhhhhhhhhhHHhhHHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHH------
Q 047682 1213 AVQFLGVQNSSSVQPVVAVERAVF-YREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVK------ 1285 (1425)
Q Consensus 1213 ~~~~~~~~~~~~~~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~------ 1285 (1425)
++++.++. +.+++|.|..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++..
T Consensus 1136 ~~~~~~~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~ 1214 (1394)
T TIGR00956 1136 ATVLFNPL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHE 1214 (1394)
T ss_pred HHHHHHHH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccc
Confidence 98887776 345668888888886 8999999999999999999999999999999999999999999988876
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHH
Q 047682 1286 -FIWYIFFMFWSFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVAS 1364 (1425)
Q Consensus 1286 -f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~ 1364 (1425)
||+|++++++..++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|++|+||++|+++|++.|
T Consensus 1215 ~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~ 1294 (1394)
T TIGR00956 1215 RGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLST 1294 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccccc---------CCCcHH--------------------------------HHHHhhhCCCCcchhHHHHHHH
Q 047682 1365 QFGDIDDTRLE---------SGETVK--------------------------------QFLRSYFGFKHDFLGVIAAVHV 1403 (1425)
Q Consensus 1365 ~~~~~~~~~~~---------~~~~~~--------------------------------~~~~~~~g~~~~~~~~~~~il~ 1403 (1425)
||+|.+..|.. +|.||+ +|++ .+|+++++.|+|+++++
T Consensus 1295 ~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~ 1373 (1394)
T TIGR00956 1295 GLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFI 1373 (1394)
T ss_pred HcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhh
Confidence 99998876642 123443 4444 56888899999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 047682 1404 AFTVLFVFVFALGIKAF 1420 (1425)
Q Consensus 1404 ~~~~~f~~~~~~~l~~~ 1420 (1425)
+|++++ +++++++.++
T Consensus 1374 ~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1374 AFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred HHHHHH-HHHHHhhheE
Confidence 999988 7777888775
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-95 Score=910.28 Aligned_cols=578 Identities=31% Similarity=0.568 Sum_probs=504.5
Q ss_pred cCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEc
Q 047682 823 EPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKIS 901 (1425)
Q Consensus 823 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~ 901 (1425)
.+..++|+|+++..+.+. ...+++|+||||+++|||++|||||||||||||||+|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~--------~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKS--------KKTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCC--------CccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 345789999998875331 13578999999999999999999999999999999999998764 789999999
Q ss_pred CccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 902 GYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 902 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
|++...+.+++.+|||+|||.++|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|+++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 599999
Q ss_pred CCCCCCchhHHHHHhhCCCCccCCCCCCCCcceEEecCch--hhhhc----cCCHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 047682 1062 GPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSS--QELAL----GVDFTDIYKGSELYRRNKALIEELSKPAP 1135 (1425)
Q Consensus 1062 G~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~--~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 1135 (1425)
|++ +++.+||+++| . +||+++|||||++|+.+.. .+... .....+.++..+...+... .....-.
T Consensus 253 G~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 323 (613)
T KOG0061|consen 253 GSP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLS 323 (613)
T ss_pred cCH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHH---HHhhhcc
Confidence 998 68999999995 4 5999999999999998842 11000 0001111110111111100 0111000
Q ss_pred CCCCCCCCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHH
Q 047682 1136 GSRDLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAVQ 1215 (1425)
Q Consensus 1136 ~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~ 1215 (1425)
... ..+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+.
T Consensus 324 ~~~--~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~~ 398 (613)
T KOG0061|consen 324 TSK--KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFILS 398 (613)
T ss_pred ccc--ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHHH
Confidence 011 1111227899999999999999999999999999999999999999999999976 45667799999999999
Q ss_pred HHHHHhhhhhhhhhHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHHHHHHHHHHHH
Q 047682 1216 FLGVQNSSSVQPVVAVERAVFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMFW 1295 (1425)
Q Consensus 1216 ~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~ 1295 (1425)
++.+..+.+.++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|++++++
T Consensus 399 ~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~ 478 (613)
T KOG0061|consen 399 FMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILL 478 (613)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 99898888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHHhCCCcccccc
Q 047682 1296 SFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVASQFGDIDDTRLE 1375 (1425)
Q Consensus 1296 ~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~ 1375 (1425)
..+.+.++|++++++.||...|..+++++++.+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|..
T Consensus 479 ~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~ 558 (613)
T KOG0061|consen 479 SSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFL 558 (613)
T ss_pred HHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999973333322
Q ss_pred C-----CCcHHHHHHhhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 047682 1376 S-----GETVKQFLRSYFGFKHDFLGVIAAVHVAFTVLFVFVFALGIKAFNFQR 1424 (1425)
Q Consensus 1376 ~-----~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1424 (1425)
. ..+..++++ ..+++.++.|.++.+++++.++|++++++++++.-..+
T Consensus 559 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 559 SGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred CcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 224555555 68999999999999999999999999999999865544
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.3e-94 Score=916.54 Aligned_cols=565 Identities=29% Similarity=0.486 Sum_probs=500.2
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 047682 851 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999986543 3589999999987656677889999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC-CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1008 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~-~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsg 1008 (1425)
+|||.|++.++.+.+.+.+++++.++++++.+||.+++|+.+|.++ .++||||||||++||+||+++|+++||||||||
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777778888899999999999999999999764 678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCccCCCCC
Q 047682 1009 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGY 1088 (1425)
Q Consensus 1009 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~ 1088 (1425)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+||. +++.+||+++| .+||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCCC
Confidence 9999999999999999988999999999998889999999999985 799999997 67899999995 3699999
Q ss_pred CCCcceEEecCchhhhh-----ccCCHHHHHhcCHHHHHHHHHHHHhcCCCC---CCCCCCCCCCccchhHHHHHHHHHH
Q 047682 1089 NPATWMLEVSSSSQELA-----LGVDFTDIYKGSELYRRNKALIEELSKPAP---GSRDLYFPTQYSQSFFTQCMACLWK 1160 (1425)
Q Consensus 1089 npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~l~~R 1160 (1425)
|||||++|+++...+.. ...++.+.|++|+.+++..+.......+.+ ........++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999987543211 112456777777766554433322111111 1111112346789999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhHHHHHHh
Q 047682 1161 QHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVAVERAVFYREK 1240 (1425)
Q Consensus 1161 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1240 (1425)
+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467899999999999999999888888899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 047682 1241 AAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAMTPNLHIATVV 1320 (1425)
Q Consensus 1241 ~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1320 (1425)
.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++..||.|++++++..++++++|+++++++|+..+|+.+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHHhCCCcc-ccccCC-----CcHHHHHHhhhCCCCcc
Q 047682 1321 SIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVASQFGDIDD-TRLESG-----ETVKQFLRSYFGFKHDF 1394 (1425)
Q Consensus 1321 ~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~g~~~~~ 1394 (1425)
++++++++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|...+ +..++++.+.||++.++
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~ 586 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNAD 586 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCccc
Confidence 999999999999999999999999999999999999999999999998764 554211 11246666789999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 047682 1395 LGVIAAVHVAFTVLFVFVFALGIKAFNFQRR 1425 (1425)
Q Consensus 1395 ~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1425 (1425)
+|.+++++++|.++|+++++++|++....+|
T Consensus 587 ~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 587 LYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999998777666
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.6e-94 Score=909.96 Aligned_cols=582 Identities=24% Similarity=0.404 Sum_probs=485.7
Q ss_pred cCceEEEecceeeeecchhh----------------hhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhc
Q 047682 823 EPLSLTFEDVVYSVDMPQEM----------------KLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 886 (1425)
Q Consensus 823 ~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~ 886 (1425)
.++.++|.|++|.+...... +......+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 36789999999998654200 00011223567999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc
Q 047682 887 GRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL 966 (1425)
Q Consensus 887 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 966 (1425)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+.+.+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999876432 345689999999999999999999999888776556666777889999999999999
Q ss_pred cccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhc
Q 047682 967 RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1046 (1425)
Q Consensus 967 ~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~f 1046 (1425)
+|+.+|+...++||||||||++||++|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999988789999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred CEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCccCCCCCCCCcceEEecCchhhhh------c---cCCHHHHHhcC
Q 047682 1047 DELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQELA------L---GVDFTDIYKGS 1117 (1425)
Q Consensus 1047 D~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~------~---~~~~~~~~~~s 1117 (1425)
|++++|++ |+++|+|+. +++++||+++| . +||+++|||||++|+++...+.. . ..+..+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999986 689999997 68999999995 3 59999999999999987532100 0 01123345321
Q ss_pred HHHHHHHHHHHH--hcC-CCC-----CCCCCC-CCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 047682 1118 ELYRRNKALIEE--LSK-PAP-----GSRDLY-FPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGS 1188 (1425)
Q Consensus 1118 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1188 (1425)
. .++..+..+. ... +.+ ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 001000 11235678999999999999988 99999999999999999999999
Q ss_pred HhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 047682 1189 LFWDLGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVAVERAVFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVV 1268 (1425)
Q Consensus 1189 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~ 1268 (1425)
+||+++ ..+++++.|++|++++++++.+++++++.|+.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467899999999999998988888888999999999999999999999999999999999999999999
Q ss_pred hhhheecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 047682 1269 YGVIVYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWY 1348 (1425)
Q Consensus 1269 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~ 1348 (1425)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.+++++++++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHHhCCCcc-----ccccC---CCcHHHHHHhhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 047682 1349 YWANPIAWTLYGLVASQFGDIDD-----TRLES---GETVKQFLRSYFGFKHDFLGVIAAVHVAFTVLFVFVFALGIKAF 1420 (1425)
Q Consensus 1349 ~~~sp~~y~~~~l~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1420 (1425)
+|+||++|++++++.|||++.+. +|... ......++. ..++++...|.++++|++|+++|+++++++|+++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 35321 011112332 2344455689999999999999999999999998
Q ss_pred cc
Q 047682 1421 NF 1422 (1425)
Q Consensus 1421 ~~ 1422 (1425)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-91 Score=950.03 Aligned_cols=562 Identities=25% Similarity=0.424 Sum_probs=495.2
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--ceEEEEEEEcCccCCc--ccccceEEEeecCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNIKISGYPKKQ--ETFARISGYCEQNDIHSP 925 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 925 (1425)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998532 2468999999987642 234567999999999999
Q ss_pred CCCHHHHHHHHhhccCCC----CCCHHHHHH-HHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEE
Q 047682 926 NVTVYESLLYSAWLRLPP----DVDSETRRM-FLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1000 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~~~----~~~~~~~~~-~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~il 1000 (1425)
.+||+|+|.|++.+|.|. +.+.+++++ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999887653 233444333 357789999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCC
Q 047682 1001 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIP 1079 (1425)
Q Consensus 1001 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~ 1079 (1425)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||+|++|++ |+++|+||. +++++||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999874 999999999998889999999999997 689999997 68999999995
Q ss_pred CCccCCCCCCCCcceEEecCchhhh----------hccCCHHHHHhcCHHHHHHHHHHHHhcCCC---------------
Q 047682 1080 GVNKIKDGYNPATWMLEVSSSSQEL----------ALGVDFTDIYKGSELYRRNKALIEELSKPA--------------- 1134 (1425)
Q Consensus 1080 g~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1134 (1425)
. +||+++|||||++|++++..+. ....+|++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4 6999999999999998864321 112478999999998887665554322110
Q ss_pred CCCCCCCCCCCccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHH
Q 047682 1135 PGSRDLYFPTQYSQSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAV 1214 (1425)
Q Consensus 1135 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1214 (1425)
..++.....+.|..|+|+|+++|++|+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234688999999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHHhhhhhhhhhHHhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHHHHHHHHHHH
Q 047682 1215 QFLGVQNSSSVQPVVAVERAVFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMF 1294 (1425)
Q Consensus 1215 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1294 (1425)
++.++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 55668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHHhCCCccccc
Q 047682 1295 WSFLLFTFYGMMCVAMTPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVASQFGDIDDTRL 1374 (1425)
Q Consensus 1295 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~ 1374 (1425)
++.++++++|+++++++||..+|+.+++++++++++|+||++|+++||+||+|++|+||++|++++++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887773
Q ss_pred c------------------------CC---CcHHHHHHhhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 047682 1375 E------------------------SG---ETVKQFLRSYFGFKHDFLGVIAAVHVAFTVLFVFVFALGIKAFNF 1422 (1425)
Q Consensus 1375 ~------------------------~~---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1422 (1425)
. +| .++.+|+...||++++++|+|++|+++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 01 156789988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-90 Score=933.75 Aligned_cols=592 Identities=22% Similarity=0.374 Sum_probs=499.2
Q ss_pred cccCceEEEecceeeeecchh-----------------hh-hcc---ccCCceeeeeceeEEEeCCeEEEEEcCCCCChh
Q 047682 821 PFEPLSLTFEDVVYSVDMPQE-----------------MK-LQG---VLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 879 (1425)
Q Consensus 821 ~~~~~~l~~~~~~~~~~~~~~-----------------~~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKT 879 (1425)
+.+.+.+.|+|+++....... .. ..+ ..+.++.+|+|||+.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 344678999999886652110 00 001 112357899999999999999999999999999
Q ss_pred hHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCC-------CCHHHH-
Q 047682 880 TLMDVLAGRKTGG-YITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPD-------VDSETR- 950 (1425)
Q Consensus 880 TLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~-------~~~~~~- 950 (1425)
||||+|+|+.++. ..+|+|.+||++..+...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 9999999986532 4689999999987544446779999999999999999999999988764321 111111
Q ss_pred -----------------------HHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 047682 951 -----------------------RMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1425)
Q Consensus 951 -----------------------~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTs 1007 (1425)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123578999999999999999998899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCccCCC
Q 047682 1008 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKD 1086 (1425)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~~~~~ 1086 (1425)
|||+.++..+++.|+++++ .|+|||+++|||+.+++++||+|++|++ |+++|+||. +++++||+++| . +||+
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~ 438 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPE 438 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCC
Confidence 9999999999999999986 4899999999998889999999999996 789999997 68999999995 4 6999
Q ss_pred CCCCCcceEEecCchhhhh------------ccCCHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCccchhHHHH
Q 047682 1087 GYNPATWMLEVSSSSQELA------------LGVDFTDIYKGSELYRRNKALIEELSKPAPGSRDLYFPTQYSQSFFTQC 1154 (1425)
Q Consensus 1087 ~~npad~~l~v~~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 1154 (1425)
++|||||++|+++...... ...+|++.|++|+.+++..+.++.........+.....+.|..+++.|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 9999999999998643211 1236889999998877655443321100011111112346899999999
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhH
Q 047682 1155 MACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVAVERA 1234 (1425)
Q Consensus 1155 ~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~ 1234 (1425)
+.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++|++++++.++++.. ++.+..||+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~ 597 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccc
Confidence 9999999999999999999999999999999999999998665445566778899999988888876654 577889999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 047682 1235 VFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAMTPNL 1314 (1425)
Q Consensus 1235 v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~ 1314 (1425)
||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+.
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHHhCCCccc---cccCC-CcHHHHHHhhhCC
Q 047682 1315 HIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVASQFGDIDDT---RLESG-ETVKQFLRSYFGF 1390 (1425)
Q Consensus 1315 ~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~---~~~~~-~~~~~~~~~~~g~ 1390 (1425)
.+|+.+++++++++++|+||++|+++||+||+|++|+||++|+++|+++|||.+.... |.... .++.+|+ +.+|+
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~ 756 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDV 756 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCc
Confidence 9999999999999999999999999999999999999999999999999999775532 11112 2445555 78899
Q ss_pred CCc--chhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047682 1391 KHD--FLGVIAAVHVAFTVLFVFVFALGIKAFN 1421 (1425)
Q Consensus 1391 ~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1421 (1425)
..+ |.|+++++|+||+++|++++++++++++
T Consensus 757 ~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 757 FTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 754 6799999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-85 Score=822.21 Aligned_cols=564 Identities=26% Similarity=0.480 Sum_probs=501.5
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeecCCCCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKISGYPKKQETFARISGYCEQNDIHSPNVT 928 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 928 (1425)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3467999999999999999999999999999999999965432 235799999998776544788999999999999999
Q ss_pred HHHHHHHHhhccCCCC----CCHHHHH-HHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 047682 929 VYESLLYSAWLRLPPD----VDSETRR-MFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1425)
Q Consensus 929 v~E~l~~~~~lr~~~~----~~~~~~~-~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLD 1003 (1425)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++|+|++||++.++|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCCchhHHHHHhhCCCCc
Q 047682 1004 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVN 1082 (1425)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~~~~~~~yf~~~~g~~ 1082 (1425)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. .++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 999999999999999999999865 899999999999999999999999997 689999998 57999999996 3
Q ss_pred cCCCCCCCCcceEEecCchhhhh-----------cc-CCHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCccchh
Q 047682 1083 KIKDGYNPATWMLEVSSSSQELA-----------LG-VDFTDIYKGSELYRRNKALIEELSKPAPGSRDLYFPTQYSQSF 1150 (1425)
Q Consensus 1083 ~~~~~~npad~~l~v~~~~~~~~-----------~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1150 (1425)
+||+..++|||+.++++...+.+ .. .+|.+.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 69999999999999998322111 11 4789999999999876544332221122223333456899999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhhH
Q 047682 1151 FTQCMACLWKQHWSYWRNPPYTAVRFLFTTAIALMFGSLFWDLGTKTSKRQDLFNAMGSMYTAVQFLGVQNSSSVQPVVA 1230 (1425)
Q Consensus 1151 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1230 (1425)
|.|++.|+.|.++.+.||..|+..++++.+++|++.|++|++.+. .+..+.+.+.|++||++++..++++..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 4677889999999999999999887776 5566
Q ss_pred HhhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047682 1231 VERAVFYREKAAGMYSSMAYAFAQVLIEIPHVFVQAVVYGVIVYAMIGFEWTAVKFIWYIFFMFWSFLLFTFYGMMCVAM 1310 (1425)
Q Consensus 1231 ~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1310 (1425)
+.|+||+|||...+|++++|.++.++.++|+.++.+++|.+|+||++||.++|++||.|+++++++..++++++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHHhCCCccccccC--------------
Q 047682 1311 TPNLHIATVVSIAFYGIWNVFSGFIIPRTRIPIWWRWYYWANPIAWTLYGLVASQFGDIDDTRLES-------------- 1376 (1425)
Q Consensus 1311 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~~-------------- 1376 (1425)
+++...|+.++++.++...+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|.+.
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998888621
Q ss_pred -------CC---cHHHHHHhhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 047682 1377 -------GE---TVKQFLRSYFGFKHDFLGVIAAVHVAFTVLFVFVFALGIKAFNFQ 1423 (1425)
Q Consensus 1377 -------~~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1423 (1425)
|. .+.+|++..|++++.|.|++++|++||.++|.+++++++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 11 346788889999999999999999999999999999999999853
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.9e-78 Score=768.75 Aligned_cols=568 Identities=26% Similarity=0.435 Sum_probs=478.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 211 (1425)
+++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++++|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 35679999999999999999999999999999999999998765568999999998865445678999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc-c
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM-L 290 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~ 290 (1425)
|+|||.|+++++..... .+ ++.+.+++++++.+||++++||.||+++ .
T Consensus 116 V~e~l~f~~~~~~~~~~-------~~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 164 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRV-------TK------------------------KEKRERVDEVLQALGLRKCANTRIGVPGRV 164 (617)
T ss_pred HHHHHHHHHhcCCCCCC-------CH------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCCC
Confidence 99999999876532110 00 1123457889999999999999999864 6
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++|
T Consensus 165 ~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G 243 (617)
T TIGR00955 165 KGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEG 243 (617)
T ss_pred CCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCC
Confidence 89999999999999999999999999999999999999999999999976 47899999999999999999999999999
Q ss_pred eEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCCC
Q 047682 371 QIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRTP 450 (1425)
Q Consensus 371 ~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (1425)
+++|+|+++++.+||+++|++||++.|++||+.++++..+.... + ...+.+++.+.|+.+...++........
T Consensus 244 ~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 316 (617)
T TIGR00955 244 RVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNLW 316 (617)
T ss_pred eEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhhh
Confidence 99999999999999999999999999999999998865332110 0 1112345556666555444433222111
Q ss_pred CCCCC---CCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchh
Q 047682 451 FDKSK---SHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYV 527 (1425)
Q Consensus 451 ~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~ 527 (1425)
..... ..........+..+++.|+..+..|.++..+||+..+..++++.+++++++|++|++.+.+.. +.....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~~ 393 (617)
T TIGR00955 317 SGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNIN 393 (617)
T ss_pred hccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHHH
Confidence 11000 000111223567889999999999999999999999999999999999999999998765432 233357
Q ss_pred hHHHHHHHHHHHhHHH-HHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHH
Q 047682 528 GALFFTIIMITFNGMA-ELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAF 606 (1425)
Q Consensus 528 g~lf~~~~~~~~~~~~-~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff 606 (1425)
|++|+.++...+.++. .+.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+++++.+||
T Consensus 394 g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~ 473 (617)
T TIGR00955 394 GALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFL 473 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHH
Confidence 8889888887777654 456677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhc
Q 047682 607 KQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFL 686 (1425)
Q Consensus 607 ~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 686 (1425)
.+++++++...++.+++.++++++++..+|..+++++++++++++||+++.++||+||+|++|+||++|+++++++|||.
T Consensus 474 ~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~ 553 (617)
T TIGR00955 474 TFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWS 553 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcc-cccCCC---CCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047682 687 GNSW-QKVLPN---STEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFL 743 (1425)
Q Consensus 687 ~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~ 743 (1425)
+..+ .|...+ .+...|..+++.+|+... ++|.++++++++.++|.++++++|++.
T Consensus 554 ~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 554 DVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776 332111 123458999999998765 458999999999999999999999864
No 11
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-78 Score=758.10 Aligned_cols=583 Identities=31% Similarity=0.536 Sum_probs=489.7
Q ss_pred CCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHH
Q 047682 83 LPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTT 162 (1425)
Q Consensus 83 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 162 (1425)
...++++|+|++++.... . +..+++|+||||+++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~-~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------S-KKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------C-CccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346789999999886432 0 03467999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhc
Q 047682 163 LLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDA 242 (1425)
Q Consensus 163 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 242 (1425)
||++|+|+.....+++|+|++||++.+....++.+|||.|+|.+++++||+||+.|+|+++-+.+ +.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~----- 139 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSK----- 139 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCH-----
Confidence 99999999987667899999999888777778899999999999999999999999998874321 111
Q ss_pred CCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCC
Q 047682 243 NIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTG 322 (1425)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsg 322 (1425)
++.+.++|++++.|||.+|+||+||+...||+||||||||+||..|+.+|+||||||||||
T Consensus 140 -------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 140 -------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 2345689999999999999999999998999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHH
Q 047682 323 LDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFL 402 (1425)
Q Consensus 323 LD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 402 (1425)
||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCccCCHHHHHHHHH-HchhhhhhhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHH
Q 047682 403 QEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQ-AFHVGQKLGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRE 481 (1425)
Q Consensus 403 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~ 481 (1425)
.++.+..++.+..... .......+.++ .....+... .........+ ........++|.|+..+.+|.
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~s~~~q~~~L~~R~ 347 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLE-ALEKSLSTSK-----KVEIGTSPSWWTQFKILLKRS 347 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHH-HHhhhccccc-----ccccccCCcHHHHHHHHHHHH
Confidence 9988743110000000 00000000000 000000000 0000000000 000111678999999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhHHHHHHHHHHHhHHH-HHHHhhhcchhhHhhhc
Q 047682 482 LLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGALFFTIIMITFNGMA-ELSMSIAKLPVFYKQRD 560 (1425)
Q Consensus 482 ~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~-~~~~~~~~~~vf~kqr~ 560 (1425)
+....|++..+..++++.+++++++|.+|++.+...... ....|++|+.+.+..+..+. .+..+..++++|.||+.
T Consensus 348 ~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~ 424 (613)
T KOG0061|consen 348 LKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETS 424 (613)
T ss_pred hHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHh
Confidence 999999999999999999999999999999986443332 24578888888887676666 58889999999999999
Q ss_pred CCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 047682 561 LRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFG 640 (1425)
Q Consensus 561 ~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~ 640 (1425)
.+.|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.++.++...++.++..+++++.++...|.+++
T Consensus 425 ~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~ 504 (613)
T KOG0061|consen 425 SGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLG 504 (613)
T ss_pred cCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCcccccCC--CCCCchhHHHhhccCccccchhH
Q 047682 641 SFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNSWQKVLP--NSTEPLGVEVLKSRGFFTDAYWY 718 (1425)
Q Consensus 641 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~~ 718 (1425)
+++++.+++++||+++.++||.||+|+.|+|+++|++++++.|||.+....|... ..+...|.++++..++...+ .
T Consensus 505 ~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 582 (613)
T KOG0061|consen 505 PVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--F 582 (613)
T ss_pred HHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--c
Confidence 9999999999999999999999999999999999999999999999733333222 23566788999998886554 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Q 047682 719 WLGMAGLAGSILLFNFGFILALSFL 743 (1425)
Q Consensus 719 w~~~~~l~~~~~~f~~~~~l~l~~~ 743 (1425)
|.++.++++++++|.+++++++.+.
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~ 607 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFR 607 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999875
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.3e-77 Score=759.20 Aligned_cols=609 Identities=22% Similarity=0.346 Sum_probs=468.5
Q ss_pred CCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHH
Q 047682 83 LPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTT 162 (1425)
Q Consensus 83 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 162 (1425)
.+.++++|.|+++.+.......+.... ...+.......+ ..++.+++++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~-l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSNI----KRILGHKPKISD-ETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccccc----cccccccccccc-ccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 457899999999987542101111110 011100001011 122233567999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhc
Q 047682 163 LLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDA 242 (1425)
Q Consensus 163 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 242 (1425)
||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~----- 175 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTK----- 175 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCH-----
Confidence 999999998874 3589999999987542 23569999999999999999999999875432110 000
Q ss_pred CCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCC
Q 047682 243 NIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTG 322 (1425)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsg 322 (1425)
++...+++++++.+||++++||.||++..++|||||||||+||++|+.+|++++|||||+|
T Consensus 176 -------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 176 -------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 1123457889999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHH
Q 047682 323 LDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFL 402 (1425)
Q Consensus 323 LD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 402 (1425)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999976 5789999888888889999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCC---CCCCCC-----CCCC-ccccCCccCCHHHH
Q 047682 403 QEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRT---PFDKSK-----SHPA-ALTTKSYGINKKEL 473 (1425)
Q Consensus 403 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 473 (1425)
.++++...+.+.....+.+ ...+++.+.|++... ++..+.... +....+ ..+. ......+..+++.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000000 112233334432111 110000000 000000 0000 00112244678999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhHHHHHHHHHHH-hHHHHHHHhhhcc
Q 047682 474 LKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGALFFTIIMITF-NGMAELSMSIAKL 552 (1425)
Q Consensus 474 ~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~-~~~~~~~~~~~~~ 552 (1425)
+..+++|.+.. +|++.....|+++.+++|+++|++|++.+ ..+.+...|++||.+++..+ ..+..+..+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999887 78887778999999999999999999864 12334567999998777554 5567788888999
Q ss_pred hhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 047682 553 PVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRS 632 (1425)
Q Consensus 553 ~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~ 632 (1425)
++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++++||.+++++++...++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCcc-----cccCCCCCCchhHHHhh
Q 047682 633 MVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNSW-----QKVLPNSTEPLGVEVLK 707 (1425)
Q Consensus 633 ~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~L~ 707 (1425)
..+|+.+++++++++++|+||+++ +||+||+|++|+||++|+++++++|||.+.+- .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 23211100011111222
Q ss_pred ccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047682 708 SRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLN 744 (1425)
Q Consensus 708 ~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~ 744 (1425)
...+. ....|.+++++++++++|.++++++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234688999999999999999999987643
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-74 Score=728.14 Aligned_cols=834 Identities=21% Similarity=0.273 Sum_probs=441.6
Q ss_pred HhHHHHHHhhhhcccCHHHHHHHHHHHH-hhcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccc
Q 047682 49 ERQRLIDKLVKVADVDNEQLLLKLKNRV-DRVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHIL 127 (1425)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (1425)
..+.-..++.++++..+. +...- ...-..-...+++|+|+++++..
T Consensus 316 ~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYPs---------------------------- 362 (1228)
T KOG0055|consen 316 KARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYPS---------------------------- 362 (1228)
T ss_pred ccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCCC----------------------------
Confidence 444445666666666554 11110 01112234678999999987622
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHD 204 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 204 (1425)
+ ++.+||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|.++++++. +.++|.|.|+|
T Consensus 363 --R-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QeP 436 (1228)
T KOG0055|consen 363 --R-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEP 436 (1228)
T ss_pred --C-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeech
Confidence 2 2457999999999999999999999999999999999999999 9999999999988764 57899999998
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+| ..||+|||.|+. |+.+.+.+.+++...+ ..+++ ..|++..||.
T Consensus 437 vlF-~~tI~eNI~~G~-------------------------~dat~~~i~~a~k~an-----a~~fi---~~lp~g~~T~ 482 (1228)
T KOG0055|consen 437 VLF-ATTIRENIRYGK-------------------------PDATREEIEEAAKAAN-----AHDFI---LKLPDGYDTL 482 (1228)
T ss_pred hhh-cccHHHHHhcCC-------------------------CcccHHHHHHHHHHcc-----HHHHH---HhhHHhhccc
Confidence 655 679999999973 3444444444443221 22333 4588899999
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
||++++. |||||||||+|||||+.+|+|||||||||+||++++..+.+.|++..+ |+|+|+ +.|..+.+ +.+|+|
T Consensus 483 vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStI-rnaD~I 557 (1228)
T KOG0055|consen 483 VGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTI-RNADKI 557 (1228)
T ss_pred ccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhh-hccCEE
Confidence 9998886 999999999999999999999999999999999999999999998754 778877 45555555 459999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHH--HhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhh
Q 047682 365 ILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFL--QEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQK 442 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1425)
++|++|+|++.|+++|+++. ..-+++.. |+....++. . +.++. ..++.....+.+.
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~---~~~~~----~~~~~~~s~~~s~---- 615 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-E---EEEES----LKEERSRSLKSSS---- 615 (1228)
T ss_pred EEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-c---ccccc----hhhhhhhcccccc----
Confidence 99999999999999999862 11222222 222211110 0 00000 0000000000000
Q ss_pred hhhccCCCCCCCCC----CCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-------HHHHH--
Q 047682 443 LGDGLRTPFDKSKS----HPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGV-------ISMTL-- 509 (1425)
Q Consensus 443 ~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~l-------i~~~~-- 509 (1425)
.......+...... ........+. ..+..+..+.|-+...+.++...+.-.+..++.|. +.+.+
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~ 692 (1228)
T KOG0055|consen 616 SSPSLSRGSNRSNLLSVKPEGEDPEEPV---SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLE 692 (1228)
T ss_pred ccccccCCcccccccccccccccccccc---ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 00000000000000 0000000000 00001222334444444444444443333333222 22221
Q ss_pred -HhccCCCCcccccccchhhHHHHHHHHHH----------HhHHHHHHHhhhcchhhHh--hhcCCCcCchhHHHHHHHH
Q 047682 510 -FFRTKMHRDSVTNGGIYVGALFFTIIMIT----------FNGMAELSMSIAKLPVFYK--QRDLRFYPAWAYGLPTWIL 576 (1425)
Q Consensus 510 -f~~~~~~~~~~~~~~~~~g~lf~~~~~~~----------~~~~~~~~~~~~~~~vf~k--qr~~~~y~~~ay~la~~i~ 576 (1425)
|+..+ .+..........++|.++.... |.-+.+....--|...|.+ ..+..||.---.. +....
T Consensus 693 ~f~~~~--~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~ 769 (1228)
T KOG0055|consen 693 AFYPPD--DDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSS 769 (1228)
T ss_pred HHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHH
Confidence 12111 1111111111223332222111 1111111111111111111 0111122110000 00000
Q ss_pred HhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH------HHHHH
Q 047682 577 KVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAML------VLFAL 650 (1425)
Q Consensus 577 ~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~------~~~l~ 650 (1425)
++- .++. . +--++..-.+.+...++++.-+..+|..+++=+.+ +++.+
T Consensus 770 RLa--------------------~Da~-~-----vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~ 823 (1228)
T KOG0055|consen 770 RLA--------------------TDAS-N-----VRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLIL 823 (1228)
T ss_pred HHh--------------------cchH-H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000 0 00000001111111222222223333333332211 12222
Q ss_pred hhccccccCcchhhHHHHhHc---HHHHHHHHHHHHhhcCCcccccCCCCCCchhHHHhhccC-------ccccchhHHH
Q 047682 651 GGFVLSREDIKKWWKWAYWCS---PLMYAQNGLAVNEFLGNSWQKVLPNSTEPLGVEVLKSRG-------FFTDAYWYWL 720 (1425)
Q Consensus 651 ~Gf~i~~~~ip~~~~W~~~is---p~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~-------~~~~~~~~w~ 720 (1425)
+++.-. +++.-.+ --.|...+-..+|...+-..... ......+++.+. -.......|.
T Consensus 824 ~~~~~~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~a----l~~e~~~~~~y~~~l~~p~~~~~~~~~i~ 891 (1228)
T KOG0055|consen 824 SGYLQK--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAA----LCAEEKFMELYKEELEKPRKSSFKRGLIS 891 (1228)
T ss_pred HHHHHH--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222110 0000000 00011111111111111000000 000001111100 0000111233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccC-CCccccccCCCCCCCCcccccchhhhhccccccc
Q 047682 721 GMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRT-GGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQ 799 (1425)
Q Consensus 721 ~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1425)
+++.-+...+.|. ...+++.|-..+-.+. .........+. ...++....+......+....++. +...
T Consensus 892 gl~f~~sqs~~~~-~~A~~f~~G~~Li~~g----~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~------Aa~~ 960 (1228)
T KOG0055|consen 892 GLGFGFSQSLLFF-VYALSFWYGARLISNG----EMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKI------AAGS 960 (1228)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHH------HHHH
Confidence 3332222222211 1122222211110000 00000000000 000000000000001010000000 0000
Q ss_pred ccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChh
Q 047682 800 SLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 879 (1425)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKT 879 (1425)
.-..-+..+..+.....+...|.-...++|+||++.|+.. ++.++|+|+|++|++|+.+||+||||||||
T Consensus 961 iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKS 1030 (1228)
T KOG0055|consen 961 IFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKS 1030 (1228)
T ss_pred HHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHH
Confidence 0000000000000001222233344579999999999743 456899999999999999999999999999
Q ss_pred hHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q 047682 880 TLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEE 956 (1425)
Q Consensus 880 TLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~ 956 (1425)
|.+.+|-+..+ +..|.|.|||.++++ +..|+.+|.|.|+|.+|. .|++||+.|+. .+.+.++ +.+
T Consensus 1031 TvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~ 1098 (1228)
T KOG0055|consen 1031 TVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIE 1098 (1228)
T ss_pred HHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHH
Confidence 99999998654 568999999998765 456788999999999985 59999999971 1244443 333
Q ss_pred HHHH-------cCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 047682 957 IMEL-------VELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 1029 (1425)
Q Consensus 957 ~l~~-------l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~ 1029 (1425)
+.+. .+|.+-.|+.+|..|+ +||||||||++|||||++||+||+|||.||.||+++.+.|+++|.+.. .||
T Consensus 1099 Aak~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gR 1176 (1228)
T KOG0055|consen 1099 AAKLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGR 1176 (1228)
T ss_pred HHHHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCC
Confidence 3333 2456667888987654 799999999999999999999999999999999999999999998875 699
Q ss_pred EEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1030 TVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1030 tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|.|+++|++| ..+.+|.|.|+++ |+++..|.-
T Consensus 1177 T~IvIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1177 TTIVIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred cEEEEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 9999999986 5788999999996 799999974
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.9e-70 Score=733.16 Aligned_cols=223 Identities=27% Similarity=0.392 Sum_probs=191.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4888999877631 135799999999999999999999999999999999998653 489999999886
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+.+|..+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998776653 334445567889999999998888874 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++..+|||+++|++ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999996 68899998
Q ss_pred CCCCchhHHHHH
Q 047682 1064 LGRHSSHLISYF 1075 (1425)
Q Consensus 1064 ~~~~~~~~~~yf 1075 (1425)
. +++..-|
T Consensus 2154 ~----q~Lk~~~ 2161 (2272)
T TIGR01257 2154 I----QHLKSKF 2161 (2272)
T ss_pred H----HHHHHHh
Confidence 6 4555444
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-70 Score=708.82 Aligned_cols=765 Identities=21% Similarity=0.269 Sum_probs=426.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHH
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRE 214 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 214 (1425)
+.|+|||++|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|++|.+ +.||||
T Consensus 535 ~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~-ngTvre 600 (1381)
T KOG0054|consen 535 PTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQ-NGTVRE 600 (1381)
T ss_pred ccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhh-CCcHHH
Confidence 3799999999999999999999999999999999999976 99999999 599999987755 679999
Q ss_pred HHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 047682 215 TLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGIS 294 (1425)
Q Consensus 215 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LS 294 (1425)
||.|+..+. .+||+.+.++|.+++|.++.|++| .|.||++++. ||
T Consensus 601 NILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGin-LS 645 (1381)
T KOG0054|consen 601 NILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGIN-LS 645 (1381)
T ss_pred hhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCccC-Cc
Confidence 999998764 479999999999999999999888 4999999885 99
Q ss_pred hhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHH-HHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEE
Q 047682 295 GGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTS-LRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIV 373 (1425)
Q Consensus 295 GGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~-L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 373 (1425)
||||||+++|||++++++|++||+|.|++|+++..+|.+. ++.+. .++|+|+ ++| ..+..+.+|.|++|++|+|+
T Consensus 646 GGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~IL-VTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 646 GGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVIL-VTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred HhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEE-EeC-chhhhhhCCEEEEecCCeEe
Confidence 9999999999999999999999999999999999999974 43332 2455555 455 56788999999999999999
Q ss_pred EecChhHHHH---HHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCCC
Q 047682 374 FQGPREHVLE---FFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRTP 450 (1425)
Q Consensus 374 ~~G~~~~~~~---~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (1425)
..|+++|+.+ .|+.+ +.+....++.. ...+.+.......+. +. +... ......+.
T Consensus 722 ~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~---~~~~~~~~- 779 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLE---SLSSEEEK- 779 (1381)
T ss_pred cccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhh---hhcccccc-
Confidence 9999999983 33322 00000000000 000000000000000 00 0000 00000000
Q ss_pred CCCCCCCCCcccc---CCccCCHHHHHHHHHHHHHHHHhcC--hHHHHH--HHHHHHHHHHHHHH-HHh--ccCCCCccc
Q 047682 451 FDKSKSHPAALTT---KSYGINKKELLKACISRELLLMKRN--SFVYIF--KLIQLTITGVISMT-LFF--RTKMHRDSV 520 (1425)
Q Consensus 451 ~~~~~~~~~~~~~---~~~~~s~~~~~~~~~~r~~~~~~r~--~~~~~~--~~~~~~i~~li~~~-~f~--~~~~~~~~~ 520 (1425)
....+..+..... ...+.-.|.- ...+.+. .+.... -+.......+..+. .|+ ++.......
T Consensus 780 ~~~~~~~~~~~~~~ee~~~G~v~~~v--------Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~ 851 (1381)
T KOG0054|consen 780 SKDEKEEEDKLVQEEERETGKVSWSV--------YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNG 851 (1381)
T ss_pred cccccchhhHHHHHHHHhcCEeeHHH--------HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 0000000000000 0000000110 0111111 111111 11111111111121 222 222111111
Q ss_pred ---ccccchhhHH----HHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHH-HHHHhh
Q 047682 521 ---TNGGIYVGAL----FFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVA-VWVILN 592 (1425)
Q Consensus 521 ---~~~~~~~g~l----f~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~-i~~~i~ 592 (1425)
.+...|.++. +...++..+.++......+.....++ -.+-..+++.|++|+++. ...+++
T Consensus 852 ~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh------------~~ml~~Ilrapm~FFdtTP~GRILN 919 (1381)
T KOG0054|consen 852 TTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLH------------DKLLNSILRAPMSFFDTTPTGRILN 919 (1381)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhCcchhcCCCCccchhh
Confidence 1222232222 22222222222222222211111111 124456777888888875 455666
Q ss_pred hhccCcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHh
Q 047682 593 YYVIGFDP---NVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYW 669 (1425)
Q Consensus 593 Y~~~gl~~---~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~ 669 (1425)
.|..+.+. .....+.+++ ..+..+++.+ .+++.....+++.+..+... ||
T Consensus 920 RFSkD~~~vD~~Lp~~~~~~~---------~~~~~~l~~~---~vi~~~~P~fli~~~pl~v~---------------~~ 972 (1381)
T KOG0054|consen 920 RFSKDIDTVDVLLPFTLEFFL---------QSLLNVLGIL---VVISYVTPWFLIAIIPLGVI---------------YY 972 (1381)
T ss_pred hcccchHHHHHhhHHHHHHHH---------HHHHHHHHHH---HHhhHHhHHHHHHHHHHHHH---------------HH
Confidence 66555431 1111111111 1111111111 11111111112221111111 11
Q ss_pred HcHHHHHHHHHHHHhhcCCcccccCCC---------------CCCchhHHHhhccCccc------cchhHHHHHH-HHHH
Q 047682 670 CSPLMYAQNGLAVNEFLGNSWQKVLPN---------------STEPLGVEVLKSRGFFT------DAYWYWLGMA-GLAG 727 (1425)
Q Consensus 670 isp~~y~~~al~~nef~~~~~~~~~~~---------------~~~~~g~~~L~~~~~~~------~~~~~w~~~~-~l~~ 727 (1425)
.--..|-..+--+.+..+.....+... .....-.......+.+. .....|+++- -+++
T Consensus 973 ~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig 1052 (1381)
T KOG0054|consen 973 FVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLG 1052 (1381)
T ss_pred HHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122222222222222211111000 00000011111111111 1122355542 2333
Q ss_pred HHHHHHHHHHHHHHhcCCC--C-CcceeecccccccccccCCCccccccCCCCCCCCcccccchhhhhcccccccccccc
Q 047682 728 SILLFNFGFILALSFLNPF--G-SQAVISEESQSNECDNRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLT 804 (1425)
Q Consensus 728 ~~~~f~~~~~l~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1425)
..+++..+....+...... + .+..++..- + ....+.+......+.+....+++++.++...+++.+.+
T Consensus 1053 ~~~v~~~al~~vl~~~~~~~~g~vGLslsyal------~---lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~ 1123 (1381)
T KOG0054|consen 1053 NLVVLIAALFAVLLPSGLISPGLVGLSLSYAL------Q---LTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLE 1123 (1381)
T ss_pred HHHHHHHHHHHHHccCCCCCcchHHHHHHHHH------H---HHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCC
Confidence 3333333222222211100 1 000011000 0 00001111111111112222233333322211111111
Q ss_pred hhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhh
Q 047682 805 EEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDV 884 (1425)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~ 884 (1425)
.+.. +....+|. ...++|+|++..|.. +-..+|||||++|+|||++||+|++|||||||+++
T Consensus 1124 ~~~~------~pp~~WP~-~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~a 1185 (1381)
T KOG0054|consen 1124 IEES------RPPPSWPS-KGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILA 1185 (1381)
T ss_pred CcCC------CCCCCCCC-CCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHH
Confidence 1000 01122332 237999999877741 23469999999999999999999999999999999
Q ss_pred hcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc
Q 047682 885 LAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELV 961 (1425)
Q Consensus 885 l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l 961 (1425)
|.+... +.+|+|.|||.++.+ .+.|++++.+|||+.+|.. |+|+|| |+..+..++.+.++||..
T Consensus 1186 LFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~ 1252 (1381)
T KOG0054|consen 1186 LFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERC 1252 (1381)
T ss_pred HHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHh
Confidence 999765 357999999998765 4678889999999998764 887776 555555666788899888
Q ss_pred CCccccccccC------CCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Q 047682 962 ELNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTI 1035 (1425)
Q Consensus 962 ~l~~~~~~~~g------~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~ 1035 (1425)
+|.+......+ .++..++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+..+ ++|||++.
T Consensus 1253 ~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIA 1331 (1381)
T KOG0054|consen 1253 QLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIA 1331 (1381)
T ss_pred ChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEe
Confidence 88765433221 134678999999999999999999999999999999999999999999999874 79999999
Q ss_pred cCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1036 HQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1036 H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|+.+ ....+|||+||++ |+++.+|++.
T Consensus 1332 HRl~--TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1332 HRLN--TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred eccc--hhhhcCeEEEeeC-CeEeecCChH
Confidence 9986 3445799999997 6889999873
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-67 Score=716.86 Aligned_cols=211 Identities=23% Similarity=0.314 Sum_probs=176.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++|+|++++|+. +..++|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 6999999998841 22369999999999999999999999999999999999766 3579999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLPG 975 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 975 (1425)
.+ ...|+.++||||++.+|.. |+||||.+.. ..++ +.+.++++..++.+. .|+.+|..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~td----eei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHND----ADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCCH----HHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 4567889999999999875 9999996531 2222 336777777776543 35555543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999986 4899999999986 4566999999997
Q ss_pred cEEEEECCCC
Q 047682 1056 GYEIYVGPLG 1065 (1425)
Q Consensus 1056 g~~~y~G~~~ 1065 (1425)
|+++.+|+..
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 6899999863
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.7e-66 Score=708.80 Aligned_cols=210 Identities=21% Similarity=0.286 Sum_probs=176.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++|+|+++.|+. +.+++|+|+|++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 6999999998841 22469999999999999999999999999999999999766 3589999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLPG 975 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 975 (1425)
.+ ..+|+.++||||++.+++. |++|||.+.. +.++ +.+.++++..++.+. .|+.+|..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHND----ADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCCH----HHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 53 4577889999999999875 9999996421 2232 336777777777543 34555543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 4899999999985 4566999999996
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|+++.+|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 688999986
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=9.1e-66 Score=610.23 Aligned_cols=474 Identities=27% Similarity=0.339 Sum_probs=364.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcccEEEECCccCCCCCc-------cceEEEEccCC-
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS-LKLSGRVTYNGHNMDEFVP-------QRTAAYISQHD- 204 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 204 (1425)
..+++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 46999999999999999999999999999999999999886 4568999999997755432 26799999984
Q ss_pred -CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 205 -VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 205 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
.+-|.+||.+.|.-..+.++... .++...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 56677899998886554432111 12334567789999999987654
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
+++++.|||||||||.||+||+.+|++|++|||||+||..++.+|++.|+++.++. ++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~-g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQREL-GMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHc-CcEEEEEcCCHHHHHHhcCe
Confidence 67889999999999999999999999999999999999999999999999998765 56677789999999999999
Q ss_pred EEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhh
Q 047682 364 IILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKL 443 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1425)
|+||++|++++.|+.+++.+- |. .||. . .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT---~--------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYT---R--------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------Cccc---H--------------HH
Confidence 999999999999999998641 11 0110 0 00
Q ss_pred hhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 047682 444 GDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNG 523 (1425)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~ 523 (1425)
..
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred cchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHH
Q 047682 524 GIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVG 603 (1425)
Q Consensus 524 ~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~ 603 (1425)
..|...
T Consensus 257 ---------------------------a~p~~~----------------------------------------------- 262 (539)
T COG1123 257 ---------------------------AVPRLG----------------------------------------------- 262 (539)
T ss_pred ---------------------------hCCCcc-----------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHH
Q 047682 604 RAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVN 683 (1425)
Q Consensus 604 ~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 683 (1425)
T Consensus 263 -------------------------------------------------------------------------------- 262 (539)
T COG1123 263 -------------------------------------------------------------------------------- 262 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccc
Q 047682 684 EFLGNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDN 763 (1425)
Q Consensus 684 ef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~ 763 (1425)
. ..
T Consensus 263 ---~--~~------------------------------------------------------------------------ 265 (539)
T COG1123 263 ---D--EK------------------------------------------------------------------------ 265 (539)
T ss_pred ---c--cc------------------------------------------------------------------------
Confidence 0 00
Q ss_pred cCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhh
Q 047682 764 RTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMK 843 (1425)
Q Consensus 764 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 843 (1425)
. . ... . .. ... ...-++.+|++..+..++...
T Consensus 266 ----------------~--~-----~~~-~------------~~-----~~~-------~~~ll~V~~l~k~y~~~~~~~ 297 (539)
T COG1123 266 ----------------I--I-----RLP-R------------RG-----PLR-------AEPLLSVRNLSKRYGSRKGLF 297 (539)
T ss_pred ----------------c--c-----ccc-c------------cc-----ccc-------cCceeEeeeeeeeeccccccc
Confidence 0 0 000 0 00 000 001255566655554322111
Q ss_pred hccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC--C---cccccceEEEee
Q 047682 844 LQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK--K---QETFARISGYCE 918 (1425)
Q Consensus 844 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~ 918 (1425)
....+...+++||||++++||++||+|+||||||||.++|+|..++ ..|.|.++|.+. . ....++.+-+++
T Consensus 298 --~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvF 373 (539)
T COG1123 298 --VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVF 373 (539)
T ss_pred --cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEE
Confidence 0001335789999999999999999999999999999999998764 579999999762 1 123445666777
Q ss_pred cCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHHHHHHHHHHHHHhh
Q 047682 919 QND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVA 995 (1425)
Q Consensus 919 Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~ 995 (1425)
||+ .+.|.+||++.+......... ....++++++.++++.++|.. ..+.. +.+||||||||++|||||+.
T Consensus 374 Qdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~ 446 (539)
T COG1123 374 QDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALAL 446 (539)
T ss_pred eCcccccCccccHHHHHHhHHhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhc
Confidence 764 678999999999876544332 235666778999999999985 34443 56899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 996 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 996 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+|++|++|||||.||+..+..|.+.|+++.++ |.|.|++|||... +...||||++|.+ |+++..||.
T Consensus 447 ~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 447 EPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred CCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999999999999999999999999765 9999999999874 7789999999996 799999975
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1e-64 Score=687.29 Aligned_cols=216 Identities=20% Similarity=0.321 Sum_probs=178.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-------------
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------- 892 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~------------- 892 (1425)
.++|+||+|.|+.. ++.++|+|+|++|+||+++||+||||||||||+++|.|..++.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 69999999998521 2346999999999999999999999999999999999965531
Q ss_pred ---------------------------------------eEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHH
Q 047682 893 ---------------------------------------YITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVTVY 930 (1425)
Q Consensus 893 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 930 (1425)
+.+|+|.+||.++.+ ..+++.+|||+|++.+| +.|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 147999999998653 45788899999999888 57999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 047682 931 ESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-------LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1425)
Q Consensus 931 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLD 1003 (1425)
|||.|+. ++.+.++ ++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~-----~~at~ee----I~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDATRED----VKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCCCHHH----HHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998852 2333333 566666666543 357778754 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCEEEEEeCC---cE-EEEECCC
Q 047682 1004 EPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GY-EIYVGPL 1064 (1425)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G---g~-~~y~G~~ 1064 (1425)
||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+-
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 35899999999985 56789999999983 55 5578874
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.7e-65 Score=698.83 Aligned_cols=211 Identities=18% Similarity=0.212 Sum_probs=176.9
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++|+|++++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 36999999999852 12359999999999999999999999999999999999765 357999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCC
Q 047682 905 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLP 974 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 974 (1425)
+.+ ...|+.++||||++.+|.. |+||||.... +.++ +.+.++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYSD----EEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCCH----HHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 754 4567889999999999875 9999995211 2233 336777888777643 35555543
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999985 5667899999996
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|+++.+|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 789999986
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-64 Score=632.12 Aligned_cols=458 Identities=21% Similarity=0.290 Sum_probs=348.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCccCCCCCc----cceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP--SLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+||||||||||+|+|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 4599999999999999999999999999999999999986 5 8999999998865432 35699999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++......+. . + ..+....++++++.+||++..++.++
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~-~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~- 142 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGI-M-------------------D-----------YDAMYLRAQKLLAQLKLDINPATPVG- 142 (506)
T ss_pred CCCcHHHHhhhcccccccCC-c-------------------C-----------HHHHHHHHHHHHHHcCCCCCcccchh-
Confidence 99999999998643210000 0 0 00112346778999999877776654
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+ ++|+.++|+..++.++||+|++|
T Consensus 143 ----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~-~tvi~~tH~~~~~~~~~d~v~~l 216 (506)
T PRK13549 143 ----NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HG-IACIYISHKLNEVKAISDTICVI 216 (506)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHHhcCEEEEE
Confidence 5999999999999999999999999999999999999999999999864 34 45555788999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhcc
Q 047682 368 SEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGL 447 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1425)
++|++++.|+.+++.. .+..+.+
T Consensus 217 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------------- 239 (506)
T PRK13549 217 RDGRHIGTRPAAGMTE--------------------------------------------DDIITMM------------- 239 (506)
T ss_pred ECCEEeeecccccCCH--------------------------------------------HHHHHHh-------------
Confidence 9999998876432200 0000000
Q ss_pred CCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchh
Q 047682 448 RTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYV 527 (1425)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~ 527 (1425)
.
T Consensus 240 ---------------------------------------------------------------~---------------- 240 (506)
T PRK13549 240 ---------------------------------------------------------------V---------------- 240 (506)
T ss_pred ---------------------------------------------------------------h----------------
Confidence 0
Q ss_pred hHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHH
Q 047682 528 GALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFK 607 (1425)
Q Consensus 528 g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 607 (1425)
T Consensus 241 -------------------------------------------------------------------------------- 240 (506)
T PRK13549 241 -------------------------------------------------------------------------------- 240 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcC
Q 047682 608 QYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLG 687 (1425)
Q Consensus 608 ~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 687 (1425)
+
T Consensus 241 -------------------------------------------------------------------------------~ 241 (506)
T PRK13549 241 -------------------------------------------------------------------------------G 241 (506)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCC
Q 047682 688 NSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGG 767 (1425)
Q Consensus 688 ~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1425)
.....
T Consensus 242 ~~~~~--------------------------------------------------------------------------- 246 (506)
T PRK13549 242 RELTA--------------------------------------------------------------------------- 246 (506)
T ss_pred cCccc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred ccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccc
Q 047682 768 TLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGV 847 (1425)
Q Consensus 768 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 847 (1425)
..+ . .. . + . + .+ -++++|+++.++.
T Consensus 247 ------------~~~------~----------------~~--~--~-~-~-----~~-~l~~~~l~~~~~~--------- 271 (506)
T PRK13549 247 ------------LYP------R----------------EP--H--T-I-G-----EV-ILEVRNLTAWDPV--------- 271 (506)
T ss_pred ------------ccc------c----------------cc--c--C-C-C-----Cc-eEEEecCcccccc---------
Confidence 000 0 00 0 0 0 0 00 2566777655421
Q ss_pred cCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeecCC--
Q 047682 848 LDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ----ETFARISGYCEQND-- 921 (1425)
Q Consensus 848 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~-- 921 (1425)
.+++.+|+|+|++|++||++||+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|+.
T Consensus 272 -~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 349 (506)
T PRK13549 272 -NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKR 349 (506)
T ss_pred -ccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhh
Confidence 0123589999999999999999999999999999999997541 137999999976532 12245689999985
Q ss_pred -CCCCCCCHHHHHHHHhhccCC--CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCC
Q 047682 922 -IHSPNVTVYESLLYSAWLRLP--PDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP 997 (1425)
Q Consensus 922 -~~~~~lTv~E~l~~~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p 997 (1425)
.+++.+||.|++.+....... ...+.+..++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|
T Consensus 350 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p 424 (506)
T PRK13549 350 DGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNP 424 (506)
T ss_pred CCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCC
Confidence 467889999999875321111 0112333445688999999996 4666653 479999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCC
Q 047682 998 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGR 1066 (1425)
Q Consensus 998 ~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~ 1066 (1425)
++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 425 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 425 KILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred CEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999999999999999888999999999986 57889999999997 67888887654
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-64 Score=635.72 Aligned_cols=488 Identities=21% Similarity=0.239 Sum_probs=352.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCC----------CCC------c-cce
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMD----------EFV------P-QRT 196 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 196 (1425)
.++|+||||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999998 999999986441 111 1 246
Q ss_pred EEEEccCC--CCCCCCCHHHHHHhhhhhc-CCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHH
Q 047682 197 AAYISQHD--VHIGEMTVRETLAFSARCQ-GVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIK 273 (1425)
Q Consensus 197 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 273 (1425)
++||+|++ .+++.+||+||+.++.+.. +.. ..+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999986 5788899999999975432 110 0112335677899
Q ss_pred HhCCcc---cccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEE
Q 047682 274 VLGLDV---CADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISL 350 (1425)
Q Consensus 274 ~lgL~~---~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~ 350 (1425)
.+||++ ..+. .+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+. +||.+
T Consensus 152 ~~gL~~~~~~~~~-----~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~-tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSR-----YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSM-GVIFI 225 (623)
T ss_pred HCCCCChhhHHhC-----CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCC-EEEEE
Confidence 999964 2343 44569999999999999999999999999999999999999999999999764444 55668
Q ss_pred ecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHH
Q 047682 351 LQPAPETYDLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEF 430 (1425)
Q Consensus 351 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 430 (1425)
+|+..++.++||+|++|++|++++.|+++++.+ .|.+....+++
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~---------------------------- 269 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALL---------------------------- 269 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhh----------------------------
Confidence 999999999999999999999999998776521 00000000000
Q ss_pred HHHHHHchhhhhhhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 047682 431 SDAFQAFHVGQKLGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLF 510 (1425)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f 510 (1425)
. . .|
T Consensus 270 -~----~-----------~~------------------------------------------------------------ 273 (623)
T PRK10261 270 -A----A-----------VP------------------------------------------------------------ 273 (623)
T ss_pred -h----c-----------cC------------------------------------------------------------
Confidence 0 0 00
Q ss_pred hccCCCCcccccccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHH
Q 047682 511 FRTKMHRDSVTNGGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVI 590 (1425)
Q Consensus 511 ~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~ 590 (1425)
.. ...
T Consensus 274 ---~~--~~~---------------------------------------------------------------------- 278 (623)
T PRK10261 274 ---QL--GAM---------------------------------------------------------------------- 278 (623)
T ss_pred ---cc--ccc----------------------------------------------------------------------
Confidence 00 000
Q ss_pred hhhhccCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhH
Q 047682 591 LNYYVIGFDPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWC 670 (1425)
Q Consensus 591 i~Y~~~gl~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 670 (1425)
T Consensus 279 -------------------------------------------------------------------------------- 278 (623)
T PRK10261 279 -------------------------------------------------------------------------------- 278 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHhhcCCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 047682 671 SPLMYAQNGLAVNEFLGNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQA 750 (1425)
Q Consensus 671 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~ 750 (1425)
.+.... ......
T Consensus 279 ---------------~~~~~~----~~~~~~------------------------------------------------- 290 (623)
T PRK10261 279 ---------------KGLDYP----RRFPLI------------------------------------------------- 290 (623)
T ss_pred ---------------ccccCC----cccccc-------------------------------------------------
Confidence 000000 000000
Q ss_pred eeecccccccccccCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEe
Q 047682 751 VISEESQSNECDNRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFE 830 (1425)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 830 (1425)
. . . .. ... .. ..... ....+ .+ -++++
T Consensus 291 -------~---~-----------------~-~~-----~~~-~~-----------~~~~~--~~~~~-----~~-~L~~~ 317 (623)
T PRK10261 291 -------S---L-----------------E-HP-----AKQ-EP-----------PIEQD--TVVDG-----EP-ILQVR 317 (623)
T ss_pred -------c---c-----------------c-cc-----ccc-Cc-----------ccccc--cccCC-----Cc-eEEEe
Confidence 0 0 0 00 000 00 00000 00000 11 37888
Q ss_pred cceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---
Q 047682 831 DVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ--- 907 (1425)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~--- 907 (1425)
|+++.++..... .+.....+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 318 ~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~ 393 (623)
T PRK10261 318 NLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSP 393 (623)
T ss_pred eeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCH
Confidence 988877421000 0000012469999999999999999999999999999999999765 347999999986532
Q ss_pred ---ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCH
Q 047682 908 ---ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 908 ---~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 981 (1425)
..+++.++|++|++ .+++.+||.|++.+....+. ....++.++.+.++++.+||. +..+.. +..|||
T Consensus 394 ~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSg 466 (623)
T PRK10261 394 GKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSG 466 (623)
T ss_pred HHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 12356799999996 57889999999987643321 112344556788999999996 455655 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||||+|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+|+|++|++ |++++
T Consensus 467 GqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~ 544 (623)
T PRK10261 467 GQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVE 544 (623)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 899999999987 57789999999997 68899
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|+..
T Consensus 545 ~g~~~ 549 (623)
T PRK10261 545 IGPRR 549 (623)
T ss_pred ecCHH
Confidence 99863
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-64 Score=630.65 Aligned_cols=458 Identities=21% Similarity=0.290 Sum_probs=346.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+||||||||||||+|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 45999999999999999999999999999999999999998 9999999998765432 2469999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++..... ..+.. +..+ ..+....++++++.+||++..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0000 00112346778999999877776664
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++++ .+ ++|+.++|+..++.++||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999865 34 4555578999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCC
Q 047682 370 GQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRT 449 (1425)
Q Consensus 370 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1425)
|++++.|+++++.. .+..+.
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHH----------------
Confidence 99998887654310 000000
Q ss_pred CCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhH
Q 047682 450 PFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGA 529 (1425)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~ 529 (1425)
+ .. ...
T Consensus 241 -----------------------------------------------------------~-~~-----~~~--------- 246 (510)
T PRK09700 241 -----------------------------------------------------------M-VG-----REL--------- 246 (510)
T ss_pred -----------------------------------------------------------h-cC-----CCc---------
Confidence 0 00 000
Q ss_pred HHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHH
Q 047682 530 LFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQY 609 (1425)
Q Consensus 530 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 609 (1425)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCc
Q 047682 610 LLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNS 689 (1425)
Q Consensus 610 l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 689 (1425)
...
T Consensus 247 -----------------------------------------------------------------------------~~~ 249 (510)
T PRK09700 247 -----------------------------------------------------------------------------QNR 249 (510)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred ccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCCcc
Q 047682 690 WQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGGTL 769 (1425)
Q Consensus 690 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1425)
..
T Consensus 250 ~~------------------------------------------------------------------------------ 251 (510)
T PRK09700 250 FN------------------------------------------------------------------------------ 251 (510)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccC
Q 047682 770 QLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLD 849 (1425)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 849 (1425)
.... . .. . . . .+.-++++|+++.+
T Consensus 252 ----------~~~~-----~-----------------~~-~--~-~-------~~~~l~~~~l~~~~------------- 275 (510)
T PRK09700 252 ----------AMKE-----N-----------------VS-N--L-A-------HETVFEVRNVTSRD------------- 275 (510)
T ss_pred ----------cccc-----c-----------------cc-c--C-C-------CCcEEEEeCccccC-------------
Confidence 0000 0 00 0 0 0 00136677776431
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeecC---CC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ----ETFARISGYCEQN---DI 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~ 922 (1425)
+ .+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|+ ..
T Consensus 276 ~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 351 (510)
T PRK09700 276 R--KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNG 351 (510)
T ss_pred C--CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCC
Confidence 1 279999999999999999999999999999999997653 47999999976532 1234568999998 45
Q ss_pred CCCCCCHHHHHHHHhhcc---CCC--C-CCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhh
Q 047682 923 HSPNVTVYESLLYSAWLR---LPP--D-VDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVA 995 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~ 995 (1425)
+++.+||+|++.+....+ ... . ......++.++++++.+++. +..+..+ ..|||||||||+||++|+.
T Consensus 352 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~ 426 (510)
T PRK09700 352 FFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCC 426 (510)
T ss_pred CcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhc
Confidence 788999999998653211 000 0 11222335578999999996 6666664 4799999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 996 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 996 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+|+||+|||||+|||+.++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |+++..++.
T Consensus 427 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 427 CPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999999999999999878999999999986 57889999999997 577888765
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.6e-64 Score=628.30 Aligned_cols=450 Identities=20% Similarity=0.311 Sum_probs=345.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 45999999999999999999999999999999999999998 9999999988754321 3569999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++.........+ + ..+...+++++++.+||++..+..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI-------------------D-----------WKKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCcc-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh---
Confidence 99999999864321000000 0 00112346678999999887776655
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 5999999999999999999999999999999999999999999999864 3 44556678999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCC
Q 047682 370 GQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRT 449 (1425)
Q Consensus 370 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1425)
|+++..|+.+++.. ++..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998775432200 0000000
Q ss_pred CCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhH
Q 047682 450 PFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGA 529 (1425)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~ 529 (1425)
+
T Consensus 238 -------------------------------------------------------------~------------------ 238 (501)
T PRK10762 238 -------------------------------------------------------------V------------------ 238 (501)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred HHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHH
Q 047682 530 LFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQY 609 (1425)
Q Consensus 530 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 609 (1425)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK10762 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCc
Q 047682 610 LLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNS 689 (1425)
Q Consensus 610 l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 689 (1425)
+..
T Consensus 239 -----------------------------------------------------------------------------~~~ 241 (501)
T PRK10762 239 -----------------------------------------------------------------------------GRK 241 (501)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 000
Q ss_pred ccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCCcc
Q 047682 690 WQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGGTL 769 (1425)
Q Consensus 690 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1425)
...
T Consensus 242 ~~~----------------------------------------------------------------------------- 244 (501)
T PRK10762 242 LED----------------------------------------------------------------------------- 244 (501)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccC
Q 047682 770 QLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLD 849 (1425)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 849 (1425)
. .. . ... + . .+..++++|++.
T Consensus 245 ----------~--------~~--~------------~~~----~-~-------~~~~l~~~~l~~--------------- 265 (501)
T PRK10762 245 ----------Q--------YP--R------------LDK----A-P-------GEVRLKVDNLSG--------------- 265 (501)
T ss_pred ----------c--------cc--c------------ccc----C-C-------CCcEEEEeCccc---------------
Confidence 0 00 0 000 0 0 001355666541
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeecCC---C
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCEQND---I 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~ 922 (1425)
.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.+||++|++ .
T Consensus 266 ---~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 340 (501)
T PRK10762 266 ---PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDG 340 (501)
T ss_pred ---CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCC
Confidence 268999999999999999999999999999999997653 479999999775321 2345689999995 5
Q ss_pred CCCCCCHHHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCc
Q 047682 923 HSPNVTVYESLLYSAWLRLP---PDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 998 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~ 998 (1425)
+++.+||.|++.+....... .....++.++.++++++.++|. +..+..+ ..|||||||||+||++|+.+|+
T Consensus 341 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~ 415 (501)
T PRK10762 341 LVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPK 415 (501)
T ss_pred CcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCC
Confidence 77889999999875311100 0122233345688999999995 5666653 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCC
Q 047682 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGR 1066 (1425)
Q Consensus 999 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~ 1066 (1425)
+|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.|+..+
T Consensus 416 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 416 VLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999999878999999999986 57889999999996 67888888754
No 25
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.9e-63 Score=622.93 Aligned_cols=464 Identities=22% Similarity=0.294 Sum_probs=345.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCCCc-------cceEEEEccCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEFVP-------QRTAAYISQHD 204 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 204 (1425)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998610 128999999998765321 24699999985
Q ss_pred C--CCCCCCHHHHHHhhhhhc-CCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccc-
Q 047682 205 V--HIGEMTVRETLAFSARCQ-GVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVC- 280 (1425)
Q Consensus 205 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 280 (1425)
. +.+.+||+|++.+..... +. . ..+...+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGM----------R------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCC----------C------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 3 567789999988643211 10 0 00123346788999999752
Q ss_pred --ccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHH
Q 047682 281 --ADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETY 358 (1425)
Q Consensus 281 --~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~ 358 (1425)
.++.+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+. +||.++|+..++.
T Consensus 148 ~~~~~~~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~-tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYP-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNM-GLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCC-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCC-eEEEEcCcHHHHH
Confidence 35444 469999999999999999999999999999999999999999999998764344 4555788888999
Q ss_pred hhcCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHch
Q 047682 359 DLFDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFH 438 (1425)
Q Consensus 359 ~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1425)
++||+|++|++|++++.|+.+++.+. |.. ...
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH-------
Confidence 99999999999999999887655210 000 000
Q ss_pred hhhhhhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047682 439 VGQKLGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRD 518 (1425)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~ 518 (1425)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred ccccccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCc
Q 047682 519 SVTNGGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGF 598 (1425)
Q Consensus 519 ~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl 598 (1425)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHH
Q 047682 599 DPNVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQN 678 (1425)
Q Consensus 599 ~~~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 678 (1425)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeeccccc
Q 047682 679 GLAVNEFLGNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQS 758 (1425)
Q Consensus 679 al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~ 758 (1425)
. . .
T Consensus 261 ------------~----~--------------------------------------------------~----------- 263 (529)
T PRK15134 261 ------------P----S--------------------------------------------------G----------- 263 (529)
T ss_pred ------------c----c--------------------------------------------------c-----------
Confidence 0 0 0
Q ss_pred ccccccCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeec
Q 047682 759 NECDNRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDM 838 (1425)
Q Consensus 759 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 838 (1425)
. . . .. . . . + .+ -++++|+++.++.
T Consensus 264 ---------------------~--~-----~-----------------~~-~--~-~-~-----~~-~l~~~~l~~~~~~ 287 (529)
T PRK15134 264 ---------------------D--P-----V-----------------PL-P--E-P-A-----SP-LLDVEQLQVAFPI 287 (529)
T ss_pred ---------------------c--c-----c-----------------cc-C--C-C-C-----CC-cccccCcEEEeec
Confidence 0 0 0 00 0 0 0 0 00 1455666655421
Q ss_pred chhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc------cccc
Q 047682 839 PQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE------TFAR 912 (1425)
Q Consensus 839 ~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~ 912 (1425)
..+. ..+ ..+.+.+|+|||++|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++
T Consensus 288 ~~~~-~~~-~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~ 362 (529)
T PRK15134 288 RKGI-LKR-TVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRH 362 (529)
T ss_pred Cccc-ccc-ccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhh
Confidence 0000 000 0012469999999999999999999999999999999999763 379999999765321 1245
Q ss_pred eEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHH
Q 047682 913 ISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTI 989 (1425)
Q Consensus 913 ~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~i 989 (1425)
.+||++|+. .+++.+||.|++.+....+.. ..+..+.++.++++++.++|. +..+.. +..|||||||||+|
T Consensus 363 ~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~l 436 (529)
T PRK15134 363 RIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAI 436 (529)
T ss_pred ceEEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHH
Confidence 689999996 477889999999886533211 122334456688999999997 455654 45799999999999
Q ss_pred HHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 990 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 990 a~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++. ++.+.+|++++|++ |+++..|+.
T Consensus 437 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 437 ARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 99999999999999999999999999999999999865 899999999986 57788999999997 678888875
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.9e-63 Score=623.75 Aligned_cols=217 Identities=23% Similarity=0.319 Sum_probs=174.4
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEc-Ccc-
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKIS-GYP- 904 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~-g~~- 904 (1425)
++++|+++.++.. ..+.+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 6677777766310 0122469999999999999999999999999999999999765 347999996 532
Q ss_pred --CCc------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccc
Q 047682 905 --KKQ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-----LRQSLV 971 (1425)
Q Consensus 905 --~~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~ 971 (1425)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..++.++++++.++|.+ ..+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988889999999998754321 222333456788999999975 34444
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEE
Q 047682 972 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1050 (1425)
Q Consensus 972 g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~ 1050 (1425)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||++||++. .+.+.+|+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999999765 899999999986 5778999999
Q ss_pred EEeCCcEEEEECCC
Q 047682 1051 LMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1051 ~l~~Gg~~~y~G~~ 1064 (1425)
+|++ |+++..|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9996 678888875
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.7e-63 Score=621.25 Aligned_cols=453 Identities=21% Similarity=0.303 Sum_probs=343.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 2469999999889999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++.... .+....++++++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~--------------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR--------------------------------------QASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc--------------------------------------hHHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853100 0012235678999999877776654
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999865 3 44566678999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCC
Q 047682 370 GQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRT 449 (1425)
Q Consensus 370 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1425)
|++++.|+.+++... + ..+.+.. .
T Consensus 216 G~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~~------------~ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------D-----------------------------IIQAITP------------A 239 (510)
T ss_pred CEEEEecChHHcCHH---------------H-----------------------------HHHHHhC------------c
Confidence 999999877654210 0 0000000 0
Q ss_pred CCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhH
Q 047682 450 PFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGA 529 (1425)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~ 529 (1425)
. .. .....
T Consensus 240 ----~-~~------------------------------------------------------------~~~~~------- 247 (510)
T PRK15439 240 ----A-RE------------------------------------------------------------KSLSA------- 247 (510)
T ss_pred ----c-cc------------------------------------------------------------ccccc-------
Confidence 0 00 00000
Q ss_pred HHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHH
Q 047682 530 LFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQY 609 (1425)
Q Consensus 530 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 609 (1425)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCc
Q 047682 610 LLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNS 689 (1425)
Q Consensus 610 l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 689 (1425)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCCcc
Q 047682 690 WQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGGTL 769 (1425)
Q Consensus 690 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1425)
.+.. + .
T Consensus 248 ~~~~-------------------------~---------------------------------------------~---- 253 (510)
T PRK15439 248 SQKL-------------------------W---------------------------------------------L---- 253 (510)
T ss_pred cccc-------------------------c---------------------------------------------c----
Confidence 0000 0 0
Q ss_pred ccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccC
Q 047682 770 QLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLD 849 (1425)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 849 (1425)
..+. . .. .. + . .+.-++.+|++.
T Consensus 254 ----------~~~~-----~-----------------~~-~~-~--~------~~~~l~~~~l~~--------------- 276 (510)
T PRK15439 254 ----------ELPG-----N-----------------RR-QQ-A--A------GAPVLTVEDLTG--------------- 276 (510)
T ss_pred ----------cccc-----c-----------------cc-cc-C--C------CCceEEEeCCCC---------------
Confidence 0000 0 00 00 0 0 001266666651
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeecCC---C
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCEQND---I 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~ 922 (1425)
.+|+|||++|++|+++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+. .
T Consensus 277 ---~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 351 (510)
T PRK15439 277 ---EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSG 351 (510)
T ss_pred ---CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCC
Confidence 158999999999999999999999999999999997653 479999999865321 1234689999984 4
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEE
Q 047682 923 HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1001 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~ill 1001 (1425)
+++.+|+.|++......+..........++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+
T Consensus 352 l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLl 426 (510)
T PRK15439 352 LYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLI 426 (510)
T ss_pred ccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEE
Confidence 788899999986421111111011222345678999999997 5666653 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1002 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 427 LDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 427 VDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred ECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999999888999999999997 58889999999986 6888888654
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.1e-63 Score=617.47 Aligned_cols=458 Identities=19% Similarity=0.256 Sum_probs=343.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCccCCCCCc----cceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP--SLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 4599999999999999999999999999999999999986 5 8999999998765432 35699999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc-ccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCA-DTMVG 286 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-~t~vg 286 (1425)
+.+||+||+.++......+... + ..+...+++++++.+||++.. ++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~- 139 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGRM-------------------A-----------YNAMYLRAKNLLRELQLDADNVTRPV- 139 (500)
T ss_pred CCCcHHHHHHhhcccccccccc-------------------C-----------HHHHHHHHHHHHHHcCCCCCcccCch-
Confidence 9999999998864321000000 0 001123466789999997654 3434
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++
T Consensus 140 ----~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~ 213 (500)
T TIGR02633 140 ----GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICV 213 (500)
T ss_pred ----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEE
Confidence 45999999999999999999999999999999999999999999999864 3 44556678999999999999999
Q ss_pred EcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhc
Q 047682 367 ISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDG 446 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1425)
|++|++++.|+.++... ....+
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~-------------- 235 (500)
T TIGR02633 214 IRDGQHVATKDMSTMSE--------------------------------------------DDIIT-------------- 235 (500)
T ss_pred EeCCeEeeecCcccCCH--------------------------------------------HHHHH--------------
Confidence 99999987654321100 00000
Q ss_pred cCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccch
Q 047682 447 LRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIY 526 (1425)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~ 526 (1425)
. +.
T Consensus 236 ----------------------------------------~----------------------~~--------------- 238 (500)
T TIGR02633 236 ----------------------------------------M----------------------MV--------------- 238 (500)
T ss_pred ----------------------------------------H----------------------Hh---------------
Confidence 0 00
Q ss_pred hhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHH
Q 047682 527 VGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAF 606 (1425)
Q Consensus 527 ~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff 606 (1425)
+
T Consensus 239 ----------------------------------------------------------------------~--------- 239 (500)
T TIGR02633 239 ----------------------------------------------------------------------G--------- 239 (500)
T ss_pred ----------------------------------------------------------------------C---------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhc
Q 047682 607 KQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFL 686 (1425)
Q Consensus 607 ~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 686 (1425)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T TIGR02633 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCC
Q 047682 687 GNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTG 766 (1425)
Q Consensus 687 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1425)
.....
T Consensus 240 -~~~~~-------------------------------------------------------------------------- 244 (500)
T TIGR02633 240 -REITS-------------------------------------------------------------------------- 244 (500)
T ss_pred -ccccc--------------------------------------------------------------------------
Confidence 00000
Q ss_pred CccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhcc
Q 047682 767 GTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQG 846 (1425)
Q Consensus 767 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 846 (1425)
... . .. . + .. ..-++++|+++.+..
T Consensus 245 -------------~~~------~----------------~~--~--~-~~-------~~~l~~~~l~~~~~~-------- 269 (500)
T TIGR02633 245 -------------LYP------H----------------EP--H--E-IG-------DVILEARNLTCWDVI-------- 269 (500)
T ss_pred -------------ccc------c----------------cc--c--C-CC-------CceEEEeCCcccccc--------
Confidence 000 0 00 0 0 00 012667777654310
Q ss_pred ccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeecCC-
Q 047682 847 VLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ----ETFARISGYCEQND- 921 (1425)
Q Consensus 847 ~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~- 921 (1425)
.+++.+|+|+|++|++||++||+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+.
T Consensus 270 --~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 346 (500)
T TIGR02633 270 --NPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRK 346 (500)
T ss_pred --cccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchh
Confidence 0123589999999999999999999999999999999997642 137999999977532 12345689999995
Q ss_pred --CCCCCCCHHHHHHHHhh--ccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHHHHHHHHHHHHHhhC
Q 047682 922 --IHSPNVTVYESLLYSAW--LRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 996 (1425)
Q Consensus 922 --~~~~~lTv~E~l~~~~~--lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~ 996 (1425)
.+++.+||+|++.+... ............++.++++++.+++.+ ..+..+ ..||||||||++||++|+.+
T Consensus 347 ~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~ 421 (500)
T TIGR02633 347 RHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTN 421 (500)
T ss_pred hCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhC
Confidence 57889999999987532 110011223334566889999999964 456553 47999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 997 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 997 p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|++|+|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 422 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 422 PRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred CCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999999999999999888999999999996 58889999999987 5777777653
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-63 Score=615.53 Aligned_cols=452 Identities=21% Similarity=0.290 Sum_probs=342.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC----ccceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV----PQRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999998 999999999875432 13579999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++......+. . + ..+....++.+++.+||++..+..++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~-------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------V-------------N-----------RRLLNYEAREQLEHLGVDIDPDTPLK--- 139 (501)
T ss_pred CCHHHHHHhcccccccCC-------C-------------C-----------HHHHHHHHHHHHHHcCCCCCcCCchh---
Confidence 999999998532100000 0 0 00112346678999999876665554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 140 --YLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred --hCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 3 44556678888899999999999999
Q ss_pred CeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccCC
Q 047682 370 GQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLRT 449 (1425)
Q Consensus 370 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1425)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999754421000 000000000
Q ss_pred CCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhhH
Q 047682 450 PFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVGA 529 (1425)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g~ 529 (1425)
+.
T Consensus 237 ------------------------------------------------------------~~------------------ 238 (501)
T PRK11288 237 ------------------------------------------------------------MV------------------ 238 (501)
T ss_pred ------------------------------------------------------------hc------------------
Confidence 00
Q ss_pred HHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHHH
Q 047682 530 LFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQY 609 (1425)
Q Consensus 530 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 609 (1425)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK11288 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCCc
Q 047682 610 LLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGNS 689 (1425)
Q Consensus 610 l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 689 (1425)
+..
T Consensus 239 -----------------------------------------------------------------------------~~~ 241 (501)
T PRK11288 239 -----------------------------------------------------------------------------GRE 241 (501)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 000
Q ss_pred ccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCCcc
Q 047682 690 WQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGGTL 769 (1425)
Q Consensus 690 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1425)
.... .
T Consensus 242 ~~~~-----------------------------------------------------------------------~---- 246 (501)
T PRK11288 242 IGDI-----------------------------------------------------------------------Y---- 246 (501)
T ss_pred cccc-----------------------------------------------------------------------c----
Confidence 0000 0
Q ss_pred ccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhccccC
Q 047682 770 QLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVLD 849 (1425)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 849 (1425)
. . . +... .+..++++|+++
T Consensus 247 ----------~--------~-----------------~-----~~~~------~~~~l~~~~~~~--------------- 265 (501)
T PRK11288 247 ----------G--------Y-----------------R-----PRPL------GEVRLRLDGLKG--------------- 265 (501)
T ss_pred ----------c--------c-----------------c-----ccCC------CCcEEEEecccc---------------
Confidence 0 0 0 0000 011356666642
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeecCC---C
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ----ETFARISGYCEQND---I 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~ 922 (1425)
..+++|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .
T Consensus 266 --~~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 341 (501)
T PRK11288 266 --PGLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEG 341 (501)
T ss_pred --CCcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCC
Confidence 138999999999999999999999999999999999765 357999999976532 12245689999985 4
Q ss_pred CCCCCCHHHHHHHHhhccC-CCC--CCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCc
Q 047682 923 HSPNVTVYESLLYSAWLRL-PPD--VDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 998 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~-~~~--~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~ 998 (1425)
+++.+|+.|++.+...... +.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+
T Consensus 342 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~ 416 (501)
T PRK11288 342 IIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMK 416 (501)
T ss_pred CcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCC
Confidence 7889999999986532111 001 11223345678999999994 5667664 4699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCCC
Q 047682 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRH 1067 (1425)
Q Consensus 999 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~~ 1067 (1425)
+|+|||||+|||+.++..+++.|+++++.|.|||++|||+. ++.+.+|++++|++ |++++.|..++.
T Consensus 417 lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 417 VILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred EEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 99999999999999999999999999888999999999986 58889999999996 678899987643
No 30
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.4e-62 Score=669.82 Aligned_cols=210 Identities=18% Similarity=0.246 Sum_probs=176.8
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999998852 23469999999999999999999999999999999999764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCC
Q 047682 905 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLP 974 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 974 (1425)
+.+ ...++.++|+||++.+|+. |+||||.... ..+ ++.+.++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CCC----HHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 4567889999999999975 9999994311 122 3346788888888643 3555554
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+..+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999985 5567999999997
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 688999976
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.5e-62 Score=666.14 Aligned_cols=211 Identities=24% Similarity=0.268 Sum_probs=177.4
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 36999999998841 22359999999999999999999999999999999999866 357999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCC
Q 047682 905 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLP 974 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 974 (1425)
+.+ ..+++.+|||||++.+|.. |++|||... .+.++ +.+.++++..++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~sd----eeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEASS----AEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCCH----HHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 653 4678899999999999875 999999531 12232 347788888888654 35566643
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 975 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 457999999999999999996 89999999999999999999999999875 4799999999984 567899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++.+|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 789999986
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-62 Score=606.06 Aligned_cols=450 Identities=17% Similarity=0.263 Sum_probs=340.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999998 9999999998754321 3579999999888999
Q ss_pred CCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 210 MTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 210 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
+||+||+.++... .+.. . + ..+....++.+++.+|+++..++.++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-- 133 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--V-------------------D-----------QDKMYRDTKAIFDELDIDIDPRAKVA-- 133 (491)
T ss_pred CCHHHHhhcccccccccc--c-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh--
Confidence 9999999875311 0000 0 0 00112346678999999877766554
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+. +++.++|+.+++.++||+|++|+
T Consensus 134 ---~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~-tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 134 ---TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGC-GIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ---hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCC-EEEEEecCHHHHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999864 344 45557899999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhccC
Q 047682 369 EGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDGLR 448 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1425)
+|+++..|+.+++.. ++..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998776432200 0000000
Q ss_pred CCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccchhh
Q 047682 449 TPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIYVG 528 (1425)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~~g 528 (1425)
.
T Consensus 231 --------------------------------------------------------------~----------------- 231 (491)
T PRK10982 231 --------------------------------------------------------------V----------------- 231 (491)
T ss_pred --------------------------------------------------------------h-----------------
Confidence 0
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHHHH
Q 047682 529 ALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAFKQ 608 (1425)
Q Consensus 529 ~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 608 (1425)
T Consensus 232 -------------------------------------------------------------------------------- 231 (491)
T PRK10982 232 -------------------------------------------------------------------------------- 231 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhcCC
Q 047682 609 YLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFLGN 688 (1425)
Q Consensus 609 ~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 688 (1425)
+.
T Consensus 232 ------------------------------------------------------------------------------~~ 233 (491)
T PRK10982 232 ------------------------------------------------------------------------------GR 233 (491)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCCCc
Q 047682 689 SWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTGGT 768 (1425)
Q Consensus 689 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (1425)
... .
T Consensus 234 ~~~---------------------------------------------------------------------------~- 237 (491)
T PRK10982 234 SLT---------------------------------------------------------------------------Q- 237 (491)
T ss_pred Ccc---------------------------------------------------------------------------c-
Confidence 000 0
Q ss_pred cccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhcccc
Q 047682 769 LQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQGVL 848 (1425)
Q Consensus 769 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 848 (1425)
.. + . .. . . . .+..++++|+++..
T Consensus 238 -----------~~-~-----~----------------~~--~--~-~-------~~~~i~~~~l~~~~------------ 260 (491)
T PRK10982 238 -----------RF-P-----D----------------KE--N--K-P-------GEVILEVRNLTSLR------------ 260 (491)
T ss_pred -----------cc-c-----c----------------cc--C--C-C-------CCcEEEEeCccccc------------
Confidence 00 0 0 00 0 0 0 01136777776531
Q ss_pred CCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeecCC---
Q 047682 849 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCEQND--- 921 (1425)
Q Consensus 849 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~--- 921 (1425)
+.+|+|||+.+++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|+.
T Consensus 261 ---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~ 335 (491)
T PRK10982 261 ---QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRST 335 (491)
T ss_pred ---CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhC
Confidence 248999999999999999999999999999999999765 3479999999765421 1245589999985
Q ss_pred CCCCCCCHHHHHHHHhh--ccCCCC-CCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCC
Q 047682 922 IHSPNVTVYESLLYSAW--LRLPPD-VDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP 997 (1425)
Q Consensus 922 ~~~~~lTv~E~l~~~~~--lr~~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p 997 (1425)
.+++.+|+.++..+.-. ...... ......++.++++++.+++. +..+.. +..|||||||||+||++|+.+|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p 410 (491)
T PRK10982 336 GIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQP 410 (491)
T ss_pred CcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCC
Confidence 35788888877432210 000001 12233345678899999985 345555 4579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 998 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 998 ~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |+++..++..
T Consensus 411 ~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 411 EILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred CEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 999999999999999999999999999888999999999986 57889999999997 5777777654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.9e-61 Score=597.45 Aligned_cols=213 Identities=19% Similarity=0.303 Sum_probs=165.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 378889887763 24599999999999999999999999999999999996431 1379999999764
Q ss_pred Cc----ccccceEEEeecCCCCCC--CCCHHHHHHHHhhc--cCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 047682 906 KQ----ETFARISGYCEQNDIHSP--NVTVYESLLYSAWL--RLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGV 976 (1425)
Q Consensus 906 ~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~~~~~l--r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 976 (1425)
.. ...++.+||++|++.+++ ..|++|++.+...- ....... ...++.++++++.++|.+ ..+.. +
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~ 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----F 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----h
Confidence 21 123457899999876543 35777766543210 1111112 223456889999999987 66665 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHH-hcCEEEEEeC
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKR 1054 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~fD~v~~l~~ 1054 (1425)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++| .|||+++|+++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 5799999999999999999999999999999999999999999999998776 47999999986 4655 5899999997
Q ss_pred CcEEEE
Q 047682 1055 GGYEIY 1060 (1425)
Q Consensus 1055 Gg~~~y 1060 (1425)
| ++++
T Consensus 479 G-~i~~ 483 (490)
T PRK10938 479 G-DIYR 483 (490)
T ss_pred C-ceEE
Confidence 5 5444
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7e-59 Score=515.59 Aligned_cols=471 Identities=25% Similarity=0.325 Sum_probs=367.6
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCccCCCCCcc-------ceEEEEcc
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP--SLKLSGRVTYNGHNMDEFVPQ-------RTAAYISQ 202 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 202 (1425)
....++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 346799999999999999999999999999999999999875 345689999999987554322 47999999
Q ss_pred CC--CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccc
Q 047682 203 HD--VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVC 280 (1425)
Q Consensus 203 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 280 (1425)
++ .+-|-.|+...|.-..++... .....++.++-++|+..|+++.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 96 566777888877766554311 0112234567788999999887
Q ss_pred ccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 047682 281 ADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDL 360 (1425)
Q Consensus 281 ~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~ 360 (1425)
.... +.++.+|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++.++.| ..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~g-Ma~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELG-MAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhC-cEEEEEeccHHHHHHh
Confidence 6544 567889999999999999999999999999999999999999999999999987764 5566689999999999
Q ss_pred cCeEEEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhh
Q 047682 361 FDDIILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVG 440 (1425)
Q Consensus 361 ~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1425)
+|+|+||.+|+++++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998877632 1110 000
Q ss_pred hhhhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 047682 441 QKLGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSV 520 (1425)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~ 520 (1425)
+.+.+
T Consensus 255 r~Ll~--------------------------------------------------------------------------- 259 (534)
T COG4172 255 RKLLA--------------------------------------------------------------------------- 259 (534)
T ss_pred HHHHh---------------------------------------------------------------------------
Confidence 00000
Q ss_pred ccccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCC
Q 047682 521 TNGGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDP 600 (1425)
Q Consensus 521 ~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~ 600 (1425)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHH
Q 047682 601 NVGRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGL 680 (1425)
Q Consensus 601 ~~~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 680 (1425)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeeccccccc
Q 047682 681 AVNEFLGNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNE 760 (1425)
Q Consensus 681 ~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 760 (1425)
.++.|
T Consensus 260 -----------------aeP~g---------------------------------------------------------- 264 (534)
T COG4172 260 -----------------AEPSG---------------------------------------------------------- 264 (534)
T ss_pred -----------------cCCCC----------------------------------------------------------
Confidence 00000
Q ss_pred ccccCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecch
Q 047682 761 CDNRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQ 840 (1425)
Q Consensus 761 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 840 (1425)
.. ... + +..+.-++.+|++..++.+.
T Consensus 265 ----------------------------~~-----------------~p~--~-------~~~~~ll~~~~v~v~f~i~~ 290 (534)
T COG4172 265 ----------------------------DP-----------------PPL--P-------EDAPVLLEVEDLRVWFPIKG 290 (534)
T ss_pred ----------------------------CC-----------------CCC--C-------CCCCceEEecceEEEEecCC
Confidence 00 000 0 00122345555555554432
Q ss_pred hhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc------ccccceE
Q 047682 841 EMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ------ETFARIS 914 (1425)
Q Consensus 841 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~ 914 (1425)
.+-.. ..+...++++||++.++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ...++.+
T Consensus 291 g~~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~m 365 (534)
T COG4172 291 GFLRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRM 365 (534)
T ss_pred ccccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhc
Confidence 21111 11345799999999999999999999999999999999987653 5999999988653 2356778
Q ss_pred EEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHH
Q 047682 915 GYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVE 992 (1425)
Q Consensus 915 gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~ 992 (1425)
-.|+||+ .+.|.+||.|-+.-+.....| ..+..++++++.++|+.+||++-... . .+.++|||||||++||||
T Consensus 366 QvVFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~--R--YPhEFSGGQRQRIAIARA 440 (534)
T COG4172 366 QVVFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRN--R--YPHEFSGGQRQRIAIARA 440 (534)
T ss_pred eEEEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhh--c--CCcccCcchhhHHHHHHH
Confidence 9999997 467999999999877666654 56788899999999999999863222 1 256899999999999999
Q ss_pred HhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 993 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 993 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|+-+|++++||||||.||-.-+.+|.++|+++.++ |.+-++++||.. -+-.+||+|+||++ |++|..||.
T Consensus 441 liLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 441 LILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 99999999999999999999999999999999754 899999999986 47789999999996 799999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.4e-58 Score=582.30 Aligned_cols=201 Identities=22% Similarity=0.307 Sum_probs=163.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488899887763 2469999999999999999999999999999999999765 34799998541
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHHH
Q 047682 906 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 983 (1425)
..+||++|+. .+++.+||+|++.+....+. .... ....+++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 67889999999987643221 1111 122457899999964 44554 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEE-EEC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVG 1062 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~-y~G 1062 (1425)
|||++||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||++||++. .+.+.+|++++|++||++. |.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 5778899999999766665 555
Q ss_pred C
Q 047682 1063 P 1063 (1425)
Q Consensus 1063 ~ 1063 (1425)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-58 Score=578.07 Aligned_cols=199 Identities=19% Similarity=0.267 Sum_probs=163.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988763 2459999999999999999999999999999999999765 34799999873
Q ss_pred CcccccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHH
Q 047682 906 KQETFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgG 982 (1425)
+.+||++|+.. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 35899999864 456799999986421 11 1 1124578899999994 555655 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++ +.|||++||++. .+.+.+|++++|++|+.+.+.|
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~g~i~~~~g 518 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITPDGVVDFSG 518 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEECCeEEEcCC
Confidence 999999999999999999999999999999999999999886 459999999986 5778899999999854333877
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 519 ~~ 520 (530)
T PRK15064 519 TY 520 (530)
T ss_pred CH
Confidence 64
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=7e-58 Score=576.12 Aligned_cols=201 Identities=20% Similarity=0.287 Sum_probs=163.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 478899887763 2469999999999999999999999999999999999765 34799998541
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHHH
Q 047682 906 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 983 (1425)
..+||++|+. .+++.+||.|++.+...... .... +....++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999987642211 1111 123457899999964 44554 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEE-EEC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVG 1062 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~-y~G 1062 (1425)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. .|||++||++. .+.+.+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998766665 555
Q ss_pred C
Q 047682 1063 P 1063 (1425)
Q Consensus 1063 ~ 1063 (1425)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-55 Score=559.24 Aligned_cols=197 Identities=23% Similarity=0.356 Sum_probs=160.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899887763 2469999999999999999999999999999999999765 34799998641
Q ss_pred CcccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHH
Q 047682 906 KQETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgG 982 (1425)
..+||++|+. .+.+..|+.+++.- . .. ...+..+.++++.+++.. ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34566788777531 1 11 112345788999999963 455553 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEE-EE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~-y~ 1061 (1425)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|++| +++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~G-~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHDG-KVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEECC-EEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 477889999999975 554 88
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.9e-56 Score=556.04 Aligned_cols=211 Identities=21% Similarity=0.248 Sum_probs=171.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 377888876652 1 24899999999999999999999999999999999765 347899875
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+.. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998888899999999874211 111 12468899999998877776 4579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | +....|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 5778899999996 4 66666764
Q ss_pred CCCc---hhHHHHHhhC
Q 047682 1065 GRHS---SHLISYFEAI 1078 (1425)
Q Consensus 1065 ~~~~---~~~~~yf~~~ 1078 (1425)
.... ..+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 3221 2344566766
No 40
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-55 Score=517.88 Aligned_cols=452 Identities=21% Similarity=0.340 Sum_probs=351.3
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc----ceEEEEccC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ----RTAAYISQH 203 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~ 203 (1425)
.++.+..++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++..-..++ .-|+.|.|+
T Consensus 15 ~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QE 91 (500)
T COG1129 15 SKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQE 91 (500)
T ss_pred eEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeec
Confidence 34455678999999999999999999999999999999999999999 99999999988765553 568999999
Q ss_pred CCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 204 DVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
..+.|++||.|||.++......... .+..+....+..+|+.+|+....++
T Consensus 92 l~L~p~LsVaeNifLgre~~~~~g~------------------------------id~~~m~~~A~~~l~~lg~~~~~~~ 141 (500)
T COG1129 92 LSLVPNLSVAENIFLGREPTRRFGL------------------------------IDRKAMRRRARELLARLGLDIDPDT 141 (500)
T ss_pred hhccCCccHHHHhhcccccccCCCc------------------------------cCHHHHHHHHHHHHHHcCCCCChhh
Confidence 9999999999999887543210000 0112234456789999999765888
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
.|++ ||+||||-|.||||+..++++++|||||+.|+...+..+++.++++.. ++..+|.++|..+|++++||+
T Consensus 142 ~v~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~Dr 214 (500)
T COG1129 142 LVGD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADR 214 (500)
T ss_pred hhhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCE
Confidence 8876 999999999999999999999999999999999999999999999964 567777799999999999999
Q ss_pred EEEEcCCeEEEecCh-hHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhh
Q 047682 364 IILISEGQIVFQGPR-EHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQK 442 (1425)
Q Consensus 364 vilL~~G~iv~~G~~-~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1425)
|.||.||+++..++. ++.- .++.
T Consensus 215 itVlRDG~~v~~~~~~~~~~--------------------------------------------~~~l------------ 238 (500)
T COG1129 215 ITVLRDGRVVGTRPTAAETS--------------------------------------------EDEL------------ 238 (500)
T ss_pred EEEEeCCEEeeecccccCCC--------------------------------------------HHHH------------
Confidence 999999999866542 1110 0000
Q ss_pred hhhccCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 047682 443 LGDGLRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTN 522 (1425)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~ 522 (1425)
T Consensus 239 -------------------------------------------------------------------------------- 238 (500)
T COG1129 239 -------------------------------------------------------------------------------- 238 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCH
Q 047682 523 GGIYVGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNV 602 (1425)
Q Consensus 523 ~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~ 602 (1425)
+..|+|
T Consensus 239 ---------------------------------------------------------------------v~~MvG----- 244 (500)
T COG1129 239 ---------------------------------------------------------------------VRLMVG----- 244 (500)
T ss_pred ---------------------------------------------------------------------HHHhhC-----
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHH
Q 047682 603 GRAFKQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAV 682 (1425)
Q Consensus 603 ~~ff~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 682 (1425)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeeccccccccc
Q 047682 683 NEFLGNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECD 762 (1425)
Q Consensus 683 nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 762 (1425)
...+
T Consensus 245 -----r~~~----------------------------------------------------------------------- 248 (500)
T COG1129 245 -----RELE----------------------------------------------------------------------- 248 (500)
T ss_pred -----cchh-----------------------------------------------------------------------
Confidence 0000
Q ss_pred ccCCCccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhh
Q 047682 763 NRTGGTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEM 842 (1425)
Q Consensus 763 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 842 (1425)
. .. .. . ... ...+..++.++++..
T Consensus 249 -----------------~---------~~--------------~~-~--~~~------~~~~~~l~v~~l~~~------- 272 (500)
T COG1129 249 -----------------D---------LF--------------PE-P--PEE------GIGEPVLEVRNLSGG------- 272 (500)
T ss_pred -----------------h---------hc--------------cc-c--ccc------CCCCcEEEEecCCCC-------
Confidence 0 00 00 0 000 001123555554321
Q ss_pred hhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEee
Q 047682 843 KLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCE 918 (1425)
Q Consensus 843 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~ 918 (1425)
..++|+||++++||++||-|-=|||+|-|+++|.|... ...|+|.+||.+.... ..+..++||+
T Consensus 273 ----------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~ 340 (500)
T COG1129 273 ----------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVP 340 (500)
T ss_pred ----------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCC
Confidence 15789999999999999999999999999999999543 3479999999986432 3456799999
Q ss_pred cC---CCCCCCCCHHHHHHHHhhccCC-C-CCCHHHHHHHHHHHHHHcCCcccc-ccccCCCCCCcCCHHHHHHHHHHHH
Q 047682 919 QN---DIHSPNVTVYESLLYSAWLRLP-P-DVDSETRRMFLEEIMELVELNPLR-QSLVGLPGVSGLSTEQRKRLTIAVE 992 (1425)
Q Consensus 919 Q~---~~~~~~lTv~E~l~~~~~lr~~-~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lSgGqrqRl~ia~~ 992 (1425)
.| +-+++.++|.||+.++...+.. . -.+....++.+++..+.+++.... +.. +..||||.+|||.|||.
T Consensus 341 EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarw 415 (500)
T COG1129 341 EDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARW 415 (500)
T ss_pred cccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHH
Confidence 87 4568899999999887332322 1 245555567788999999886422 222 56799999999999999
Q ss_pred HhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 993 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 993 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|..+|+||+|||||.|+|.-++.+|.+++++++++|++||++|-+.. |+..+||||++|++ |+++-
T Consensus 416 L~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 416 LATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred HhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999885 89999999999997 56544
No 41
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-54 Score=553.20 Aligned_cols=202 Identities=24% Similarity=0.341 Sum_probs=163.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCC-
Confidence 478899887763 2469999999999999999999999999999999999765 34799988 432
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCHHH
Q 047682 906 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGq 983 (1425)
-.+||++|+. .+++.+||.|++.+..... .... ....+.++++.+++. +..+.. +..|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVNG--RPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhcccc---cccc--hHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 1489999975 5788999999998753210 1111 123467888888885 345555 34799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-CCcEEEEEC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGYEIYVG 1062 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~-~Gg~~~y~G 1062 (1425)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++|||+. .+...+|++++|+ +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 5778899999998 676667777
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.3e-53 Score=518.98 Aligned_cols=221 Identities=25% Similarity=0.296 Sum_probs=170.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 211 (1425)
+.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+. -+++|++|+....+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCcc
Confidence 4567999999999999999999999999999999999999998 999998752 37999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCCh---HHHH-HHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDI---DVFM-KALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
|.+.+.-+..- .++...+..... ...++++. +.+. .....++++.+.+++.++..||++.. ++.++
T Consensus 83 v~~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~- 152 (530)
T COG0488 83 VLDYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS- 152 (530)
T ss_pred HHHHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh-
Confidence 99999876431 111111111111 11222211 1111 11234557777889999999999877 66665
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.||||||.||+||++|+.+|++|+||||||+||..+...+-+.|+ ...+ ++|.++|++..+-+.|++|+-+
T Consensus 153 ----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~----~~~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 153 ----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLK----RYPG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred ----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHH----hCCC-cEEEEeCCHHHHHHHhhheEEe
Confidence 499999999999999999999999999999999999555555554 3456 5556899999999999999999
Q ss_pred cCCeEE-EecChhHHH
Q 047682 368 SEGQIV-FQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv-~~G~~~~~~ 382 (1425)
+.|++. |.|.++...
T Consensus 224 d~g~l~~y~Gny~~~~ 239 (530)
T COG0488 224 DRGKLTPYKGNYSSYL 239 (530)
T ss_pred cCCceeEecCCHHHHH
Confidence 999875 677665543
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3e-53 Score=539.27 Aligned_cols=200 Identities=20% Similarity=0.281 Sum_probs=156.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ +++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488899988763 12369999999999999999999999999999999999765 34799988652
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCcCCHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqr 984 (1425)
..+||++|+.. ..+++.++.........+ ... ++.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 445666664322111111 111 234678999999974 44544 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEE-EECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~-y~G~ 1063 (1425)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. +.|||++||++. .+...+|++++|++ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 349999999986 47788999999997 5665 7776
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.6e-51 Score=468.42 Aligned_cols=459 Identities=22% Similarity=0.317 Sum_probs=356.9
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc----ceEEEEccCCCC
Q 047682 131 KKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ----RTAAYISQHDVH 206 (1425)
Q Consensus 131 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~ 206 (1425)
.....+++|||+++++||+++|+|.|||||||||++|.|.+.|+ +|+|.++|++++-..++ ..||+|.||..+
T Consensus 14 f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~L 90 (501)
T COG3845 14 FPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFML 90 (501)
T ss_pred cCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccc
Confidence 34678999999999999999999999999999999999999999 99999999998765553 469999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++++||.|||..+..-... .+. +......+++++.+.+||+-..|.+|+
T Consensus 91 v~~lTV~ENiiLg~e~~~~-~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~ 139 (501)
T COG3845 91 VPTLTVAENIILGLEPSKG-GLI------------------------------DRRQARARIKELSERYGLPVDPDAKVA 139 (501)
T ss_pred ccccchhhhhhhcCccccc-ccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceee
Confidence 9999999999987542110 000 011234567889999999999998888
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+ ||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|+++++ .+.+||.++|-..|+.+.||++-|
T Consensus 140 d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTV 212 (501)
T COG3845 140 D-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTV 212 (501)
T ss_pred c-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEE
Confidence 6 999999999999999999999999999999999999999999999976 345566689999999999999999
Q ss_pred EcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHHchhhhhhhhc
Q 047682 367 ISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVTSKKDQQQYWVRKEEPYRFVTVKEFSDAFQAFHVGQKLGDG 446 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1425)
|..|+++-.-++ . . ..+.+++++
T Consensus 213 LR~Gkvvgt~~~--~--------------~---------------------------~~t~~ela~-------------- 235 (501)
T COG3845 213 LRRGKVVGTVDP--V--------------A---------------------------ETTEEELAE-------------- 235 (501)
T ss_pred EeCCeEEeeecC--C--------------C---------------------------CCCHHHHHH--------------
Confidence 999998632210 0 0 000000000
Q ss_pred cCCCCCCCCCCCCccccCCccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccch
Q 047682 447 LRTPFDKSKSHPAALTTKSYGINKKELLKACISRELLLMKRNSFVYIFKLIQLTITGVISMTLFFRTKMHRDSVTNGGIY 526 (1425)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~~li~~~~f~~~~~~~~~~~~~~~~ 526 (1425)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHhHHHHHHHhhhcchhhHhhhcCCCcCchhHHHHHHHHHhhHHHHHHHHHHHhhhhccCcCCCHHHHH
Q 047682 527 VGALFFTIIMITFNGMAELSMSIAKLPVFYKQRDLRFYPAWAYGLPTWILKVPIAFVEVAVWVILNYYVIGFDPNVGRAF 606 (1425)
Q Consensus 527 ~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~~P~~~~~~~i~~~i~Y~~~gl~~~~~~ff 606 (1425)
.|+|
T Consensus 236 -------------------------------------------------------------------lMvG--------- 239 (501)
T COG3845 236 -------------------------------------------------------------------LMVG--------- 239 (501)
T ss_pred -------------------------------------------------------------------HhcC---------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcchhhHHHHhHcHHHHHHHHHHHHhhc
Q 047682 607 KQYLLLVLVNQMSSGLFRLMAATGRSMVVANTFGSFAMLVLFALGGFVLSREDIKKWWKWAYWCSPLMYAQNGLAVNEFL 686 (1425)
Q Consensus 607 ~~~l~l~l~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 686 (1425)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCCchhHHHhhccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceeecccccccccccCC
Q 047682 687 GNSWQKVLPNSTEPLGVEVLKSRGFFTDAYWYWLGMAGLAGSILLFNFGFILALSFLNPFGSQAVISEESQSNECDNRTG 766 (1425)
Q Consensus 687 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1425)
.. +
T Consensus 240 -~~---v------------------------------------------------------------------------- 242 (501)
T COG3845 240 -RE---V------------------------------------------------------------------------- 242 (501)
T ss_pred -Cc---c-------------------------------------------------------------------------
Confidence 00 0
Q ss_pred CccccccCCCCCCCCcccccchhhhhcccccccccccchhhhcccCCCCCCccccccCceEEEecceeeeecchhhhhcc
Q 047682 767 GTLQLSTCGSSSSHLTQSDESRDNIRRRNSTSQSLSLTEEDIAANQPKRSGMVLPFEPLSLTFEDVVYSVDMPQEMKLQG 846 (1425)
Q Consensus 767 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 846 (1425)
. ... .. .+...+ +..++.+|++...+
T Consensus 243 -------------~--------~~~--------------~~----~~~~pg------~~vL~V~~L~v~~~--------- 268 (501)
T COG3845 243 -------------V--------LRV--------------VK----PPSTPG------EVVLEVEDLSVKDR--------- 268 (501)
T ss_pred -------------c--------ccc--------------cc----CCCCCC------CeEEEEeeeEeecC---------
Confidence 0 000 00 000000 12477777765432
Q ss_pred ccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC----Cc-ccccceEEEeecCC
Q 047682 847 VLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK----KQ-ETFARISGYCEQND 921 (1425)
Q Consensus 847 ~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~----~~-~~~~~~~gyv~Q~~ 921 (1425)
.....+++|||++++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. +. ...++.++|||+|.
T Consensus 269 ---~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR 343 (501)
T COG3845 269 ---RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDR 343 (501)
T ss_pred ---CCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhh
Confidence 124679999999999999999999999999999999997642 359999999985 22 22345689999986
Q ss_pred ---CCCCCCCHHHHHHHHhhccC----CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHh
Q 047682 922 ---IHSPNVTVYESLLYSAWLRL----PPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELV 994 (1425)
Q Consensus 922 ---~~~~~lTv~E~l~~~~~lr~----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~ 994 (1425)
.+.+.+|+.||+.+...-+- ..-.+....+++..++++.++....... ...+.||||++||+-+||+|.
T Consensus 344 ~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~ 419 (501)
T COG3845 344 HGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELA 419 (501)
T ss_pred ccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhc
Confidence 34689999999987643211 1124556777888999999988632211 125689999999999999999
Q ss_pred hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 995 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 995 ~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
++|++|+..+||.|||..+.+.|.+.|.+.++.|+.|++++-+.. |+++++|||.+|.+ |+++...++.
T Consensus 420 ~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 420 RRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred cCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 999999999999999999999999999999999999999999997 79999999999996 6777776664
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-44 Score=371.58 Aligned_cols=214 Identities=26% Similarity=0.366 Sum_probs=189.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|++.++ +...+|+|||++|++||+++|+|||||||||||+||.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6778887766 35689999999999999999999999999999999999866 45899999996542
Q ss_pred ----cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 ----QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
-...|+.+|+|+|+..+||++||.||+..+-..- ...++++.++...++|+.+||.+.+|.. +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2346788999999999999999999999864322 3566777888889999999999999886 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|||||+|||||+.+|+++++|||||.|||+...++.+.+++++++|.|.||+||.... .-+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 6788999999986 7889998
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.1e-43 Score=406.95 Aligned_cols=201 Identities=20% Similarity=0.286 Sum_probs=156.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+.++|+++.++ ++..++++++|-|.+++.+|++||||+|||||||++.|...+ ..|.+.-.-+.
T Consensus 389 vi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 578899988774 122689999999999999999999999999999999997653 46766543221
Q ss_pred CcccccceEEEeecC--CCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQETFARISGYCEQN--DIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~--~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.+++..|+ +.+.-+.++-|+++=. ...+.+.+.+..++..+||....+.. ..+.||+||
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~Gq 514 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDGQ 514 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCcccccc----chhhccccc
Confidence 22344443 2333456777776421 11133445678899999998544332 256899999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|+||..|+.++..|.||+|||||+|||..+...+.++|.+. ..+||.++||-.. |-+.++++.+..+|+...+.|.
T Consensus 515 r~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G~ 590 (614)
T KOG0927|consen 515 RRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDGD 590 (614)
T ss_pred chhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCcc
Confidence 99999999999999999999999999999999999999876 5689999999874 7888999999999999999886
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 591 i 591 (614)
T KOG0927|consen 591 I 591 (614)
T ss_pred H
Confidence 4
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-43 Score=369.42 Aligned_cols=224 Identities=24% Similarity=0.380 Sum_probs=189.6
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC----CccceEEEEccCCC
Q 047682 130 RKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF----VPQRTAAYISQHDV 205 (1425)
Q Consensus 130 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~ 205 (1425)
..++.++|+|||++|++||+++|+|||||||||||++|.|+.+++ +|+|.++|.++... ..|+.+|+|+|+..
T Consensus 11 ~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fn 87 (240)
T COG1126 11 SFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFN 87 (240)
T ss_pred EeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccc
Confidence 345678999999999999999999999999999999999999999 99999999766421 24688999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+||.+||-||+..+...- . ..+.++++......|+.+||.+.+|..
T Consensus 88 LFPHlTvleNv~lap~~v---------~------------------------~~~k~eA~~~A~~lL~~VGL~~ka~~y- 133 (240)
T COG1126 88 LFPHLTVLENVTLAPVKV---------K------------------------KLSKAEAREKALELLEKVGLADKADAY- 133 (240)
T ss_pred ccccchHHHHHHhhhHHH---------c------------------------CCCHHHHHHHHHHHHHHcCchhhhhhC-
Confidence 999999999999874321 0 011223455667899999999988754
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+.+|||||||||+|||||+.+|+++++|||||+|||+...++.+.++++++. +.|.+.++|......+.+|||+
T Consensus 134 ----P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~Vadrvi 207 (240)
T COG1126 134 ----PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVI 207 (240)
T ss_pred ----ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEE
Confidence 4569999999999999999999999999999999999999999999999873 4556668999999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHh
Q 047682 366 LISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQE 404 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~ 404 (1425)
+|++|+++.+|+++++ |..|.+....+|+..
T Consensus 208 Fmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 208 FMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred EeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999999887 345665556666654
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-41 Score=392.74 Aligned_cols=223 Identities=30% Similarity=0.437 Sum_probs=193.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
+.++|++..++ .++.+|+||||+|++|+++||+||||||||||||+|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCc
Confidence 56677776552 146899999999999999999999999999999999998763 5899999998765
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 907 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+.++.. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567789999999999999999999999999986543 44566799999999999855544 467999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+||+||+++|++|||||||+|||+.++..+++.|++++++| +||++|||+++ ++...||+|++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999996 78999997
Q ss_pred CCCCchhHHHHHhh
Q 047682 1064 LGRHSSHLISYFEA 1077 (1425)
Q Consensus 1064 ~~~~~~~~~~yf~~ 1077 (1425)
. .++...+..
T Consensus 221 ~----~~l~~~~~~ 230 (293)
T COG1131 221 P----EELKEKFGG 230 (293)
T ss_pred H----HHHHHhhcc
Confidence 6 345555443
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-42 Score=372.03 Aligned_cols=224 Identities=26% Similarity=0.363 Sum_probs=194.8
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDV 205 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 205 (1425)
+..++|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|+++..+.. |+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988876542 478999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
++...||.||++|..+..+.+ ..+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999988765521 124466788999999999887754
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|++.|+++.++.| .+|+.++|-++-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 557999999999999999999999999999999999999999999999988765 555558899999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhhc
Q 047682 366 LISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEVT 406 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v~ 406 (1425)
+|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999988 34565555555665544
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-42 Score=360.54 Aligned_cols=211 Identities=27% Similarity=0.409 Sum_probs=188.0
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIG 208 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 208 (1425)
.++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.+. |+.+|||-|+--+||
T Consensus 12 ~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP 88 (309)
T COG1125 12 GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP 88 (309)
T ss_pred CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCC
Confidence 4567999999999999999999999999999999999999999 9999999999987654 689999999999999
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
++||.|||.+--.+++.. .++.+.+++++|+.+||+.. ...++
T Consensus 89 h~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~R 131 (309)
T COG1125 89 HLTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADR 131 (309)
T ss_pred CccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhc
Confidence 999999999876665432 12345678999999999752 12357
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
+++.|||||+|||.+||||+.+|++++||||+++||+-++.++.+.++++.++.++|+|+ ++|+.+|.+.++|||++|+
T Consensus 132 yP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivf-VTHDidEA~kLadri~vm~ 210 (309)
T COG1125 132 YPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVF-VTHDIDEALKLADRIAVMD 210 (309)
T ss_pred CchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEE-EecCHHHHHhhhceEEEec
Confidence 778899999999999999999999999999999999999999999999998877665554 7999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 047682 369 EGQIVFQGPREHVLE 383 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~ 383 (1425)
+|+++..|++++++.
T Consensus 211 ~G~i~Q~~~P~~il~ 225 (309)
T COG1125 211 AGEIVQYDTPDEILA 225 (309)
T ss_pred CCeEEEeCCHHHHHh
Confidence 999999999999864
No 51
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-41 Score=358.64 Aligned_cols=230 Identities=27% Similarity=0.384 Sum_probs=199.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+++++++.++ +.+.+++|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 58888888765 456899999999999999999999999999999999998763 589999999885
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCc
Q 047682 906 KQ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSG 978 (1425)
Q Consensus 906 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 978 (1425)
.+ ...++++|+++|+-.+|.++||+||+.|.. |...+.+++..++.+..-++++||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 135678999999999999999999999864 344567778888888888999999876 5544 578
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
||||+|||++|||||+.||+|||+||||+||||.++..+-++|+++.++ |.|++++|||.. +++..+||+++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999997 69999999999997 68
Q ss_pred EEEECCCCC----CchhHHHHHhhCC
Q 047682 1058 EIYVGPLGR----HSSHLISYFEAIP 1079 (1425)
Q Consensus 1058 ~~y~G~~~~----~~~~~~~yf~~~~ 1079 (1425)
+++.|++.+ ....+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 999999753 2235677887654
No 52
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=371.77 Aligned_cols=219 Identities=23% Similarity=0.328 Sum_probs=191.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
+++++++..+... ......+|+|||++|++||++||+|+||||||||++++.+... +.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5677777555310 1124579999999999999999999999999999999999766 45899999997643
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. +..|+.+|+++|+..++...||+||+.|...+. ..++++++++|.++++.+||.+.++.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeia---g~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELA---GVPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhc---CCCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 346788999999999999999999999987765 367888999999999999999888876 46899
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
|||||||+|||||+.+|+||++|||||.|||.+.+.|.+.|+++.++ |.|||++||+++ -+-+.||||.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999866 999999999986 37789999999996 7999
Q ss_pred EECCCC
Q 047682 1060 YVGPLG 1065 (1425)
Q Consensus 1060 y~G~~~ 1065 (1425)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999863
No 53
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=367.13 Aligned_cols=225 Identities=29% Similarity=0.470 Sum_probs=191.8
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCc---cCCCCCc-cceEEEEccCCCC
Q 047682 131 KKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGH---NMDEFVP-QRTAAYISQHDVH 206 (1425)
Q Consensus 131 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~ 206 (1425)
.....+++|||+.|+.||+++|+|||||||||||++|+|+..|+ +|.|.+||. +.+.... .|+||||+|+-.+
T Consensus 12 ~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YAL 88 (345)
T COG1118 12 FGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYAL 88 (345)
T ss_pred cccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhh
Confidence 34567899999999999999999999999999999999999999 999999999 5555333 3889999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
|+.|||.|||+|+.+++.. .|+ ..+.+.+++++|+.+.|++.++
T Consensus 89 F~HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la~---- 132 (345)
T COG1118 89 FPHMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLAD---- 132 (345)
T ss_pred cccchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchhh----
Confidence 9999999999999876521 111 1233556888999999987765
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+++.+|||||||||++||||+..|++|+||||+++||...+.++.++|+++.+..+.|++. ++|+..|++++||+|++
T Consensus 133 -ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvf-VTHD~eea~~ladrvvv 210 (345)
T COG1118 133 -RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVF-VTHDQEEALELADRVVV 210 (345)
T ss_pred -cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEE-EeCCHHHHHhhcceEEE
Confidence 5667899999999999999999999999999999999999999999999998766666555 79999999999999999
Q ss_pred EcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHh
Q 047682 367 ISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQE 404 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~ 404 (1425)
|++|+|...||++++. ..|...-+..|+-+
T Consensus 211 l~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 211 LNQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred ecCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 9999999999999984 34555545555443
No 54
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-41 Score=364.96 Aligned_cols=217 Identities=27% Similarity=0.428 Sum_probs=184.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++ ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.+.|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 588999999884 22 59999999999999999999999999999999999665 3589999999886
Q ss_pred CcccccceEEEeecCCCC--CCCCCHHHHHHHHhhccCC--CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQETFARISGYCEQNDIH--SPNVTVYESLLYSAWLRLP--PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~~~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
++..-+..+|||||...+ ..-+||+|-+..+..-+.+ ....+ ..++.++++|+.+|+.+++|..+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~-~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNK-KDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccH-HHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654445689999995422 2347999999876433221 11222 336779999999999999999876 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||+||+.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||+|+.|++ ++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln~--~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLNR--HLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEcC--eeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 58999999999974 78999
Q ss_pred CCCCC
Q 047682 1062 GPLGR 1066 (1425)
Q Consensus 1062 G~~~~ 1066 (1425)
||+.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99864
No 55
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-41 Score=384.31 Aligned_cols=217 Identities=30% Similarity=0.455 Sum_probs=194.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc-ceEEEEccCCCCCCCCCHHH
Q 047682 136 ILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ-RTAAYISQHDVHIGEMTVRE 214 (1425)
Q Consensus 136 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 214 (1425)
+|+|+|++|++||.++|+|||||||||||++|||+.+|+ +|+|.++|.++++..+. |.+|+|+|+..++|.|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999999 99999999999998775 88999999999999999999
Q ss_pred HHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 047682 215 TLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGIS 294 (1425)
Q Consensus 215 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LS 294 (1425)
|+.|+.+.++.. .++.+.+++++.+.|+|++..|++. ++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~P-----~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRKP-----LQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 999998876531 1234667889999999999988654 5699
Q ss_pred hhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEE
Q 047682 295 GGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVF 374 (1425)
Q Consensus 295 GGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 374 (1425)
|||||||++||||+.+|++++||||+|.||...+.++...++++.+..+ +++|.++|+..|+..++|||++|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999876654 555558999999999999999999999999
Q ss_pred ecChhHHHHHHHhCCCCCCCCCCHHHHHH
Q 047682 375 QGPREHVLEFFKSMGFECPKRKGVADFLQ 403 (1425)
Q Consensus 375 ~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ 403 (1425)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999994 4577766777654
No 56
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.4e-41 Score=368.53 Aligned_cols=210 Identities=31% Similarity=0.455 Sum_probs=181.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc---ceEEEEccCCCCCCC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ---RTAAYISQHDVHIGE 209 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 209 (1425)
++++|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+...+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 356999999999999999999999999999999999999998 99999999999877653 789999999888899
Q ss_pred CCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 210 MTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 210 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
+||+|-+.++..- ++. + . ...++....++..|+.+|+.+.+++.+.
T Consensus 91 ~tV~d~V~~GR~p~~~~---~----------------~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~-- 137 (258)
T COG1120 91 LTVYELVLLGRYPHLGL---F----------------G------------RPSKEDEEIVEEALELLGLEHLADRPVD-- 137 (258)
T ss_pred cEEeehHhhcCCccccc---c----------------c------------CCCHhHHHHHHHHHHHhCcHHHhcCccc--
Confidence 9999999987431 110 0 0 0011123357889999999999987765
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.|||||||||.|||||+++|++|+||||||+||...+.++++.+++++++.+.|+| .+.|+......+||++++|+
T Consensus 138 ---~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv-~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 138 ---ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVV-MVLHDLNLAARYADHLILLK 213 (258)
T ss_pred ---ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEE-EEecCHHHHHHhCCEEEEEE
Confidence 49999999999999999999999999999999999999999999999876555554 47889999999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998875
No 57
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.1e-41 Score=368.20 Aligned_cols=218 Identities=28% Similarity=0.400 Sum_probs=187.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++.+|+++.|+ ++.+|+|+|+++++|++++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889988873 4689999999999999999999999999999999999765 3479999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPP-DVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. +.+++.++|+||.......+||+|.+.++..-.... ....++.++.++++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 467789999999998888999999998764321111 1122333457899999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||+.|||||+++|+||+||||||+||...+.++++.++++++ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 49999999999984 7889999999996 68899
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99875
No 58
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=358.91 Aligned_cols=204 Identities=26% Similarity=0.364 Sum_probs=180.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 367788877763 2579999999999999999999999999999999999876 3589999999886
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
.. ....+|||+|++.++|-+||+||+.++...+. .++++++++++++++.+||.+..|.. +.+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999876653 45666777899999999999999886 5689999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999998764 5899999999997 677889999999974
No 59
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.2e-36 Score=405.59 Aligned_cols=216 Identities=23% Similarity=0.356 Sum_probs=186.7
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++++|++..++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 36889999887631 23579999999999999999999999999999999999865 358999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 905 KKQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 905 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.++.++++++.+||.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876652 233444567899999999998887764 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||++||+++ ++..++||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57788999999997 6888998
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-40 Score=358.34 Aligned_cols=193 Identities=29% Similarity=0.446 Sum_probs=167.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc------ccc-cceEEEeecCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ------ETF-ARISGYCEQNDIHS 924 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~~~~~ 924 (1425)
..+|++||++|++||++||||||||||||||++|.|...+ .+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999997654 58999999976532 123 45699999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccc-cccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 047682 925 PNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1425)
Q Consensus 925 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLD 1003 (1425)
|++||+||+.....+.. .....+++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~---~~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAG---KSAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcC---CChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 99999999998765542 222255667899999999986665 43 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 1004 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
|||..||+.++..|++.+++++++ |+|||++|||| ++...+||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999866 89999999998 5788999999999865
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-41 Score=384.72 Aligned_cols=224 Identities=29% Similarity=0.445 Sum_probs=198.5
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 210 (1425)
+...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||.|
T Consensus 16 g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHl 92 (352)
T COG3842 16 GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHM 92 (352)
T ss_pred CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCC
Confidence 3567999999999999999999999999999999999999999 9999999999998876 48899999999999999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.|+.+.++... ..+.+.+++++++.++|++.++.. +
T Consensus 93 tV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~R~-----p 134 (352)
T COG3842 93 TVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFADRK-----P 134 (352)
T ss_pred cHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhhhC-----h
Confidence 99999999987432110 123456788999999999877654 4
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.+|||||||||+|||||+.+|++|+||||.|+||..-+.++..-|+++.+..| .+.|.++|+..|...++|||++|++|
T Consensus 135 ~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~g-iT~i~VTHDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 135 HQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELG-ITFVYVTHDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred hhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHhhhccceEEccCC
Confidence 56999999999999999999999999999999999999999999999988775 45555899999999999999999999
Q ss_pred eEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhh
Q 047682 371 QIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEV 405 (1425)
Q Consensus 371 ~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v 405 (1425)
+|...|+++++ |..|...-+|+|+-+.
T Consensus 214 ~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 214 RIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred ceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 99999999999 4568788888888754
No 62
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.2e-41 Score=401.49 Aligned_cols=231 Identities=23% Similarity=0.439 Sum_probs=194.0
Q ss_pred CCCCC---ceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCC
Q 047682 80 GISLP---EIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPP 156 (1425)
Q Consensus 80 ~~~~p---~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 156 (1425)
|...| +..|+|+|+++.+.. +++.+||+|+|++|+|||.|||+|||
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~-------------------------------Rp~~~Vlk~lsfti~pGe~vALVGPS 503 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPT-------------------------------RPDVPVLKNLSFTIRPGEVVALVGPS 503 (716)
T ss_pred CccccccccceEEEEEeeeecCC-------------------------------CCCchhhcCceeeeCCCCEEEEECCC
Confidence 55444 468999999998732 13457999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhh
Q 047682 157 ASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLV 233 (1425)
Q Consensus 157 GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 233 (1425)
||||||+.++|..+++|+ +|+|.+||+|+.++++ ++.||+|.|+|.+|. -||+|||.|+..
T Consensus 504 GsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~------------ 567 (716)
T KOG0058|consen 504 GSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD------------ 567 (716)
T ss_pred CCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC------------
Confidence 999999999999999999 9999999999998875 588999999998875 599999999853
Q ss_pred HhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcE
Q 047682 234 ELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALA 313 (1425)
Q Consensus 234 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~i 313 (1425)
..+.|+++.++.... ..+++ .++++.+||.||+++.. ||||||||++|||||+++|+|
T Consensus 568 -------------~~t~e~i~~AAk~AN-----ah~FI---~~~p~gY~T~VGEkG~q-LSGGQKQRIAIARALlr~P~V 625 (716)
T KOG0058|consen 568 -------------NATDEEIEAAAKMAN-----AHEFI---TNFPDGYNTVVGEKGSQ-LSGGQKQRIAIARALLRNPRV 625 (716)
T ss_pred -------------CCCHHHHHHHHHHhC-----hHHHH---HhCccccccccCCcccc-ccchHHHHHHHHHHHhcCCCE
Confidence 223344444443222 23444 46999999999998875 999999999999999999999
Q ss_pred eEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHH
Q 047682 314 LFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 314 llLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 383 (1425)
|||||.||+||+++...+.++|.+..+ ++|+++ |. |+-++.+.+|+|+++++|++++.|+++|+++
T Consensus 626 LILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IA-HRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 626 LILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IA-HRLSTVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Ee-hhhhHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 999999999999999999999988755 456655 44 4557889999999999999999999999975
No 63
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-40 Score=382.28 Aligned_cols=212 Identities=32% Similarity=0.471 Sum_probs=185.7
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC--CccceEEEEccCCCCCCCC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF--VPQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 210 (1425)
.+.+|+||||+|++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999998 99999999887653 3457899999999999999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+|||.|.+++.+... .....+++++++.+||++..++. +
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-----~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKANKK-----V 134 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhCcc-----h
Confidence 99999999998875321 01234578899999999854444 4
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
++||+||||||+||.||+++|+++||||||+|||+.++.++++.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 569999999999999999999999999999999999999999999999874 3355666788899999999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 047682 371 QIVFQGPREHVLEFFKS 387 (1425)
Q Consensus 371 ~iv~~G~~~~~~~~F~~ 387 (1425)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776543
No 64
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-41 Score=353.43 Aligned_cols=213 Identities=26% Similarity=0.361 Sum_probs=189.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++|+|++..+. ++.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 56788876652 4579999999999999999999999999999999999876 45899999999865
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc--ccccccCCCCCCcCCH
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP--LRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSg 981 (1425)
. ...||.+|||-|.-.+||++||.||+.+--.+. .+++++.+++++|+|+++||.+ ++++. +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 357889999999999999999999998765543 6788889999999999999975 66665 578999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||+|||.+||||+++|+||+||||++.|||-++..+++.++++.++ |+|||++|||.. |.+.+.|||.+|++ |+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 999999999987 78999999999995 67788
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
+|++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7775
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-40 Score=349.08 Aligned_cols=211 Identities=24% Similarity=0.374 Sum_probs=181.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDV 205 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 205 (1425)
+.+.|++|||+.|++||+++|+||||||||||||.|.|+++|+ +|+|.++|+++..... ++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999999 9999999999866542 477999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+|..+||+||+.|..+-.. ++.+ ...+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~---------~lp~------------------------~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------KLPE------------------------SLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhc---------cCCH------------------------HHHHHHHHHHHHhcCCChh----h
Confidence 9999999999999754321 1111 1223344556788899754 3
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
.+.++..||||++||+++|||++.+|+++|+||||+|||+.++..+.+.++++.+..+.|+++ ++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~-VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIM-VTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEE-EECChHHHHhhhceEE
Confidence 456777899999999999999999999999999999999999999999999998887666555 7999999999999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 047682 366 LISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~ 383 (1425)
+|.+|+|+.+|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 66
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=350.27 Aligned_cols=222 Identities=26% Similarity=0.327 Sum_probs=187.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..++ +++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.+||..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478888887663 45689999999999999999999999999999999999655 4589999999764
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 047682 906 KQ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-----PDVDSETRRMFLEEIMELVELNPLRQSLVGLP 974 (1425)
Q Consensus 906 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 974 (1425)
.. +.+++.+||++|+..+.+.++|.||+..+..-+.+ -....++.+...-++|+.+|+.+.+-.+.
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34678899999999999999999999876422211 12333444556678899999998887774
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
..|||||+|||+|||+|+.+|+|++.|||+++|||.+++.||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 469999999999999999999999999999999999999999999999854 8999999999864 678999999999
Q ss_pred CCcEEEEECCCCCCc
Q 047682 1054 RGGYEIYVGPLGRHS 1068 (1425)
Q Consensus 1054 ~Gg~~~y~G~~~~~~ 1068 (1425)
+ |+++|.||..+..
T Consensus 223 ~-G~ivfDg~~~el~ 236 (258)
T COG3638 223 A-GRIVFDGPASELT 236 (258)
T ss_pred C-CcEEEeCChhhhh
Confidence 6 7999999986533
No 67
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=355.91 Aligned_cols=194 Identities=28% Similarity=0.415 Sum_probs=171.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
.++|+|+|++|++||+++|+||||||||||||+|+|+.+|+ +|+|.++|.+++ .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999999 999999999883 3567899999999999999999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||+.|+.+..+... .+...+++..|+.+||.+..| +++++|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987654211 112336788999999998876 455679
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC--Ce
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE--GQ 371 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~--G~ 371 (1425)
||||||||+|||||+.+|++|+||||+++||..|+.++.+.|.++.+..+.| ++.++|+.+|...++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~T-vllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKT-VLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCE-EEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 9999999999999999999999999999999999999999999998876555 55589999999999999999998 55
Q ss_pred E
Q 047682 372 I 372 (1425)
Q Consensus 372 i 372 (1425)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 68
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-41 Score=342.67 Aligned_cols=202 Identities=27% Similarity=0.377 Sum_probs=184.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ--ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+... ...++.+|.++.+-.++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3589999999999999999999999999999999998763 58999999998543 4567889999988889999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+|||.|.+.+. +....+.+++.+++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999876 56677778889999999999999999976 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1010 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|..+...+.+.++++.+.|++||++||..+ |+.++||+|++|++ |++++.|...
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999988999999999986 78889999999997 6899999863
No 69
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=361.74 Aligned_cols=205 Identities=30% Similarity=0.451 Sum_probs=184.8
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCc---cCCc-ccccceEEEeecCCCCCCC
Q 047682 851 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGY---PKKQ-ETFARISGYCEQNDIHSPN 926 (1425)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 926 (1425)
...+++|||++|+.||++||+|||||||||||++|+|..++ ..|.|.+||. +..+ ....|.+|||+|+..+|+.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 45689999999999999999999999999999999998764 5899999998 5443 3446789999999999999
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 047682 927 VTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1425)
Q Consensus 927 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPT 1006 (1425)
+||.||+.|+.+++ ....++.+.+.+++++|+.+.|+++.+.. +..|||||||||++||||+.+|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998877 34456677888999999999999999886 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1007 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
++||+.-+..+.+.|+++.+. |.|+|++|||+. ++++.+|||++|++ |++.-.||+.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999866 999999999997 79999999999997 6788888874
No 70
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=340.44 Aligned_cols=208 Identities=29% Similarity=0.360 Sum_probs=184.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 209 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 209 (1425)
....+++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+.. .++.+|.++.+..++..
T Consensus 13 ~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~R 89 (245)
T COG4555 13 SKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYAR 89 (245)
T ss_pred CHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhh
Confidence 3445999999999999999999999999999999999999999 999999999875443 36889999988899999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
||++|||.|.+++.+.. +.+.+.+++++.+.|+|.+|.|+.+|+
T Consensus 90 lT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~-- 133 (245)
T COG4555 90 LTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE-- 133 (245)
T ss_pred hhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh--
Confidence 99999999998876432 123456788999999999999999985
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+|-|+||||+|||||+++|++++|||||||||..+...+.+.++++.. . +.+++..+|..+|+..+||+|++|++
T Consensus 134 ---~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-e-gr~viFSSH~m~EvealCDrvivlh~ 208 (245)
T COG4555 134 ---FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-E-GRAVIFSSHIMQEVEALCDRVIVLHK 208 (245)
T ss_pred ---hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-C-CcEEEEecccHHHHHHhhheEEEEec
Confidence 999999999999999999999999999999999999999999998743 3 45555578999999999999999999
Q ss_pred CeEEEecChhHHHH
Q 047682 370 GQIVFQGPREHVLE 383 (1425)
Q Consensus 370 G~iv~~G~~~~~~~ 383 (1425)
|++++.|+.+++.+
T Consensus 209 Gevv~~gs~~~l~~ 222 (245)
T COG4555 209 GEVVLEGSIEALDA 222 (245)
T ss_pred CcEEEcCCHHHHHH
Confidence 99999999988764
No 71
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-40 Score=357.10 Aligned_cols=208 Identities=25% Similarity=0.417 Sum_probs=176.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCC--CCCCCCCH
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHD--VHIGEMTV 212 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 212 (1425)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+.+||||||.. .+-...||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 4999999999999999999999999999999999999998 999999999887776678999999953 33445799
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+|.+..+..-+. .+++ .. ..+....++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~--g~~~---~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK--GWFR---RL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc--cccc---cc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999998732111 0110 00 111245688999999999999988886
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.++ | .+|+.++|+...+.++||+|+.|+ +++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g-~tIl~vtHDL~~v~~~~D~vi~Ln-~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-G-KTVLMVTHDLGLVMAYFDRVICLN-RHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCcHHhHhhCCEEEEEc-Cee
Confidence 9999999999999999999999999999999999999999999999875 4 455558999999999999999995 568
Q ss_pred EEecChhHHHH
Q 047682 373 VFQGPREHVLE 383 (1425)
Q Consensus 373 v~~G~~~~~~~ 383 (1425)
++.|+++++..
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 72
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.1e-39 Score=331.11 Aligned_cols=212 Identities=26% Similarity=0.346 Sum_probs=183.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++|++|+..|. ..+++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 57888876664 23579999999999999999999999999999999999655 35899999999854
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. .-.+|.+|+|+||..+.++.||+||+.|..... .....+.+++|.++|+.+||.+.++.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 2 135789999999999999999999999987665 455677788899999999999988776 46799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||+||++||||++.+|++|+.||||-+||+..+..||+++.++.+.|.||++.||+.+. +..+--|++.|++ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999999999999999642 4445578999997 56655
Q ss_pred EC
Q 047682 1061 VG 1062 (1425)
Q Consensus 1061 ~G 1062 (1425)
..
T Consensus 218 d~ 219 (223)
T COG2884 218 DE 219 (223)
T ss_pred cc
Confidence 43
No 73
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=371.59 Aligned_cols=215 Identities=27% Similarity=0.382 Sum_probs=192.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..+. +. .+|+|+|++|+.||+++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg------------~~-~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG------------SF-EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC------------Cc-eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888887663 21 29999999999999999999999999999999999876 4589999999987
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
+. ...+|.+++|+|+..++|++||+||+.|+.+++ ..++++.+++|+++.+.|+|.++.|++ +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 345688999999999999999999999998776 456778889999999999999999987 468999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+++|++++||||.|.||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|++ |++.-.|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~~-G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMND-GRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEeC-CeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999985 89999999999995 78888887
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 63
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=335.78 Aligned_cols=217 Identities=24% Similarity=0.315 Sum_probs=187.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCC---CCceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~---~~~~~~G~i~i~g 902 (1425)
.++.+|++..|. .+.+|+|||+.|++++++|++|||||||||||+++.+.. ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578889888773 457999999999999999999999999999999999843 3346899999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGV 976 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~ 976 (1425)
.++.. ...||.+|.|+|.+.-|| +|++||+.|+.++....+ ++.++.|++.|+...|++- +|.+-.. .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 87543 256889999999999999 999999999987764332 6678889999999999864 4444222 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.+|||||+|||||||+|+.+|+||+||||||+|||.+...|.+++.++. +.-|||++||.+. ......|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4799999999996 57788999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
+++.+|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999997
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=335.31 Aligned_cols=223 Identities=25% Similarity=0.401 Sum_probs=182.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCCC-----ccceEEEEccCCC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDV 205 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 205 (1425)
++.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+.. .|+++|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 4569999999999999999999999999999999998754 45678999999999986542 3689999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV-CADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~ 284 (1425)
-|| +|++||+.|+.+..|... + +.+..++..|+.-+|-+ ..|..
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~--------------------------------~ldeiVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--K--------------------------------ELDEIVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--H--------------------------------HHHHHHHHHHHHhHhHHHhHHHh
Confidence 998 999999999999877532 1 11223444444444432 22322
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
++...+|||||+||++|||||+-+|+||+||||||+||+-++..|-+.+.++.+ .-+|+.++|......+..|++
T Consensus 144 --~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 --HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred --hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhh
Confidence 123346999999999999999999999999999999999999999999999854 445555899999999999999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHH
Q 047682 365 ILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQ 403 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~ 403 (1425)
.++..|++++.|+.+++ |..|.++...||+.
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYis 249 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYIS 249 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHhc
Confidence 99999999999999988 45677766666653
No 76
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=341.01 Aligned_cols=217 Identities=26% Similarity=0.374 Sum_probs=182.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDV 205 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 205 (1425)
..+++|+|||++|++||+++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4567999999999999999999999999999999999999998 9999999988765542 478999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+.+.+||.+|+..+...+. +.++....+ -..+.+..+-..|+.+|+.+.+.++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~slfgl------------------------fsk~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSLFGL------------------------FSKEDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHHhCC------------------------CCHHHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 111111111 11122334456789999999888877
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
++ |||||+|||+|||||+.+|++++-|||+++||+.++.++++.|+++++..|.|+|+. +|..+-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHHhhhe
Confidence 64 999999999999999999999999999999999999999999999998877777665 566778899999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 047682 366 LISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~ 383 (1425)
-|++|+|+|+||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988754
No 77
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=372.41 Aligned_cols=216 Identities=26% Similarity=0.379 Sum_probs=192.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..+. +..+|+|+|++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888877663 4679999999999999999999999999999999999876 4589999999987
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.. ...+|.+|+|+|+..+||+|||+||+.|+.+++ ....+++.+++++++++.++|.+..+.. +.+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 65 345788999999999999999999999997743 3455667888999999999999998887 468999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+.+|++|+||||.|.||..-+..+..-|+++.++ |.|.|++|||.+ |.+.+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998754 999999999986 78899999999996 68888887
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 63
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-38 Score=369.96 Aligned_cols=214 Identities=28% Similarity=0.423 Sum_probs=186.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 588899987763 2469999999999999999999999999999999999765 3589999999886
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.. ...++.+|||+|++.+++.+||+||+.|.+.++ ..+..+.++.++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYF---GLSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 234678999999999999999999999876554 2333444566889999999998888764 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999997 68889999999997 68899998
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-38 Score=344.52 Aligned_cols=196 Identities=27% Similarity=0.416 Sum_probs=167.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 206 (1425)
.++|+|+|++|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999998876542 3679999999999
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
+|++||+||+.......+.... ......+.+++.+||++..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999987665543110 12335677899999986655
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+..+..|||||||||+|||||+.+|++++.||||..||+.++..|++.++++++..+.|+|+ ++|+ +++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~-VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIM-VTHD-PELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEE-EcCC-HHHHHhCCEEEE
Confidence 12344699999999999999999999999999999999999999999999998765555555 4554 478889999999
Q ss_pred EcCCeE
Q 047682 367 ISEGQI 372 (1425)
Q Consensus 367 L~~G~i 372 (1425)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 80
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.6e-39 Score=401.06 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=208.4
Q ss_pred hHHhHHHHHHhhhhcccCHHHHHHHHHHHHhhcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhcc
Q 047682 47 LLERQRLIDKLVKVADVDNEQLLLKLKNRVDRVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHI 126 (1425)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1425)
.++-+.-.+|+..+.+.++|.-..+. ....+....+++|+|+++.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCCC--------------------------
Confidence 35667777888888887777322111 11122234689999999987431
Q ss_pred ccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccC
Q 047682 127 LPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQH 203 (1425)
Q Consensus 127 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 203 (1425)
+..+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++.++ |+.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 125899999999999999999999999999999999999998 9999999999988765 5899999996
Q ss_pred CCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 204 DVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
+. +++.||+||+.++. |+.+.|+++.|+...+.. +. ...++..+||
T Consensus 556 ~~-Lf~gSI~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~-----~f---I~~lP~gy~t 601 (709)
T COG2274 556 PF-LFSGSIRENIALGN-------------------------PEATDEEIIEAAQLAGAH-----EF---IENLPMGYDT 601 (709)
T ss_pred ch-hhcCcHHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcH-----HH---HHhccccccc
Confidence 55 55679999999863 444555566665444322 22 2468999999
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.++..|.+.|.++.+ ++|+|++.| +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaH--Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAH--RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEc--cchHhhhccE
Confidence 9997665 6999999999999999999999999999999999999999999999854 577777443 3468899999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 047682 364 IILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~~ 383 (1425)
|++|++|+|+.+|+++++++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.5e-38 Score=367.93 Aligned_cols=206 Identities=24% Similarity=0.340 Sum_probs=178.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 207 (1425)
.++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999999876532 46799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.|+.+..+.. ..+...++.++++.+||++..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------------------------------KDEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCCh--
Confidence 9999999999875432210 0112335678899999988777554
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+..+.| |+.++|+.+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~t-iiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLT-ILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999997755555 555788899999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 82
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.7e-38 Score=369.97 Aligned_cols=207 Identities=27% Similarity=0.418 Sum_probs=179.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999998876543 4789999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+.++.. ..+...+++++++.+||++..|+.+ +.
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 99999986532210 0112345788999999998877554 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+..+.| ++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~t-vi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVT-TIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987654544 55578899999999999999999999
Q ss_pred EEecChhHHHH
Q 047682 373 VFQGPREHVLE 383 (1425)
Q Consensus 373 v~~G~~~~~~~ 383 (1425)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 83
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.6e-38 Score=367.22 Aligned_cols=217 Identities=23% Similarity=0.299 Sum_probs=185.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. .....+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788888776311 112469999999999999999999999999999999999866 35899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
.. ..++.+||++|+..+++..||+||+.|....+ ..+.++.++++.++++.+||.+..|.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 23567999999999999999999999876533 234555667789999999999888776 45799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999986 57789999999986 6889
Q ss_pred EECCC
Q 047682 1060 YVGPL 1064 (1425)
Q Consensus 1060 y~G~~ 1064 (1425)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 84
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.7e-38 Score=369.33 Aligned_cols=207 Identities=21% Similarity=0.353 Sum_probs=180.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcc--cEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLS--GRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 210 (1425)
..+|+|+|++|++|++++|+|||||||||||++|+|+.+|+ + |+|.++|+++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999999998 8 999999998865543 46799999999999999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.|+.+..+.. ..+...+++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------------------------------KADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 9999999986543210 0112335778999999998877665
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999876542455666899999999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999884
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=371.36 Aligned_cols=206 Identities=26% Similarity=0.391 Sum_probs=179.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 45999999999999999999999999999999999999998 9999999999876543 4789999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+..+.. ..+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 99999986532210 0112335678999999988777655 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++|+|||||++||..++..+.+.|+++.+..+ ++++.++|+..++.+++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLK-TTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999876544 4555578899999999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-38 Score=369.74 Aligned_cols=206 Identities=24% Similarity=0.394 Sum_probs=179.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999876554 3789999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+.++.. ..+...+++++++.+||.+..+..+ +.
T Consensus 96 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gl~~~~~r~~-----~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVP----------------------------------KEERKQRVKEALELVDLAGFEDRYV-----DQ 136 (351)
T ss_pred HHHHHHHHhHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99999986543211 0112345778999999987776554 56
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.| ++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~t-ii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNIT-SLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987654544 55578999999999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 87
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=8.7e-38 Score=369.02 Aligned_cols=215 Identities=26% Similarity=0.375 Sum_probs=188.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478889887763 2468999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.++.++++++.++|.++.+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224577999999999999999999999986543 244556677899999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+.+|++|+||||||+||..++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999996 68899999999997 68899998
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 88
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-38 Score=345.00 Aligned_cols=207 Identities=26% Similarity=0.403 Sum_probs=181.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCC----CCCccceEEEEccC-CCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMD----EFVPQRTAAYISQH-DVHIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~-d~~~~ 208 (1425)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|+ |..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 46999999999999999999999999999999999999998 999999999865 23346889999999 56788
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
.-||.|.++|+.+..+... ++...+++.+++.+||.+.++..
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~---- 135 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRP---- 135 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCC----
Confidence 8899999999987765421 12456788999999999887654
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
+..|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++.+. ++.++|.++|+...+.+++|++++|+
T Consensus 136 -p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 -PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred -ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999999764 34555558999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 047682 369 EGQIVFQGPREHVLE 383 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~ 383 (1425)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877754
No 89
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=351.22 Aligned_cols=213 Identities=25% Similarity=0.352 Sum_probs=179.7
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4677776652 2469999999999999999999999999999999999765 347999999987532
Q ss_pred ------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 908 ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 908 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
..+++.++|++|++.+++.+||+||+.+...... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999999999999999988643221 2234444567889999999987776653 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999864 899999999986 57788999999997 67888
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8875
No 90
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-37 Score=361.47 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=178.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999876432 2467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.|.++..+... .+...+++.+++.+||.+..++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998655432110 0112345778999999988887775
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
+|||||||||+||+||+++|++++|||||+|||+.++..+++.|+++.+ . +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999854 3 4556667899999999999999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 91
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=368.88 Aligned_cols=215 Identities=26% Similarity=0.365 Sum_probs=186.7
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887662 12469999999999999999999999999999999999765 35899999998764
Q ss_pred c-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 907 Q-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 907 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
. ...+|.+|||+|++.++|++||+||+.|....+ ..+..+.++.++++++.++|.+..+.. +..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRK-----PRELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHH
Confidence 3 223478999999999999999999999986543 234555667789999999999888876 3579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 68899999999986 788999986
Q ss_pred C
Q 047682 1065 G 1065 (1425)
Q Consensus 1065 ~ 1065 (1425)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 3
No 92
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=366.13 Aligned_cols=215 Identities=24% Similarity=0.377 Sum_probs=188.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478899887763 2468999999999999999999999999999999999876 3589999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
... ..+|.+|||+|+..++|++||+||+.|....+ ..+..+.+++++++++.++|.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 23578999999999999999999999987544 244556677899999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |+|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999996 68899999999997 68889998
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 93
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-37 Score=366.15 Aligned_cols=209 Identities=21% Similarity=0.328 Sum_probs=180.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHD 204 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 204 (1425)
+.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 3456999999999999999999999999999999999999998 9999999999876543 46899999999
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+++.+||+||+.|+.+..+... .+...++.++++.+||++..++.
T Consensus 81 ~l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~ 126 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRY 126 (363)
T ss_pred cCCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCC
Confidence 99999999999999765432110 11233567789999998777665
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
++ .|||||||||+|||||+.+|+++||||||+|||+.++..+.+.++++.+..++| |+.++|+..++..++|+|
T Consensus 127 p~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~T-ii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 127 PD-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKT-IVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHhCCEE
Confidence 54 599999999999999999999999999999999999999999999986544444 555789999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|+++..|+++++..
T Consensus 201 ~vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 201 VIMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEEeCCEEEeeCCHHHHHh
Confidence 9999999999999998753
No 94
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.6e-38 Score=315.66 Aligned_cols=201 Identities=24% Similarity=0.396 Sum_probs=175.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 217 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 217 (1425)
..++.|++||++||+||||||||||||+|+|+..|. +|+|.+||++.+...+ +|-++.++|+..+|..+||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467889999999999999999999999999999998 9999999999987665 578999999999999999999999
Q ss_pred hhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 047682 218 FSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQ 297 (1425)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 297 (1425)
++.. ++-+ +.. +....++.++..+||..+.++..+ .|||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8742 1111 111 123457788999999999876655 599999
Q ss_pred hhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecC
Q 047682 298 RKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGP 377 (1425)
Q Consensus 298 rqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 377 (1425)
||||++||+|+++.+|++||||+|+||+.-+.++...+.+++.+.+.|+++ ++|+.+++..++|+++++++|||.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999887766666 5667778999999999999999999999
Q ss_pred hhHHH
Q 047682 378 REHVL 382 (1425)
Q Consensus 378 ~~~~~ 382 (1425)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88775
No 95
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.9e-37 Score=366.34 Aligned_cols=215 Identities=24% Similarity=0.320 Sum_probs=187.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEE--EEEEEcCc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNIKISGY 903 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~--G~i~i~g~ 903 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 478889888763 24699999999999999999999999999999999997653 46 99999998
Q ss_pred cCCc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 904 PKKQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 904 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
+... ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..+.. +..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~-----~~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHL-----PAQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCC-----hhhCCHH
Confidence 7643 223567999999999999999999999986543 244556667789999999999988876 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|+|++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68899999999996 68899
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 96
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-37 Score=360.70 Aligned_cols=229 Identities=23% Similarity=0.350 Sum_probs=189.9
Q ss_pred cCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCC
Q 047682 79 VGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPAS 158 (1425)
Q Consensus 79 ~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 158 (1425)
..+..|.-.++|+|+++++. .+++||+++||+|++|+.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 45667778899999999873 133599999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHh
Q 047682 159 GKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVEL 235 (1425)
Q Consensus 159 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 235 (1425)
||||++|+|.++++ . +|+|.+||+++.+... |+.||||||+ .++++.||.+||.+|..- .-++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 5 9999999999987654 5789999995 556677999999998432 224455555
Q ss_pred hHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeE
Q 047682 236 SRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALF 315 (1425)
Q Consensus 236 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~ill 315 (1425)
|++... .|. ...|++.++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~--------------------------hd~---i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGL--------------------------HDV---ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCc--------------------------HHH---HHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 544221 122 245889999999998876 99999999999999999999999
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHH
Q 047682 316 MDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 316 LDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 383 (1425)
+|||||.||++|+.++++.+... ..++|+|+. .|.. .+...||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~I-vH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMI-VHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEE-Eecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999884 235666664 4443 5778999999999999999999999986
No 97
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-37 Score=362.53 Aligned_cols=214 Identities=26% Similarity=0.383 Sum_probs=186.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..++ ++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 588999988763 34699999999999999999999999999999999997663 489999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.. ...++.+||++|+..+++.+||.|++.+.+.+.. .+..+.++.++++++.++|.+..+..+ +.|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 43 2346679999999999999999999987665432 233344556788999999998888774 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||++||++|+++|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++ ++.+.||+|++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999997 68899998
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 6
No 98
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-37 Score=368.27 Aligned_cols=218 Identities=26% Similarity=0.381 Sum_probs=184.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998876543 4779999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+..+.. ..+...+++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------------------------------AAEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 99999986432210 0112335678899999988777655 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++|+||||++|||..++..+.+.|+++.+..+. ++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~-tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGI-TFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998775444 555578999999999999999999999
Q ss_pred EEecChhHHHHHHHhCCCCCCCCCCHHHHH
Q 047682 373 VFQGPREHVLEFFKSMGFECPKRKGVADFL 402 (1425)
Q Consensus 373 v~~G~~~~~~~~F~~~G~~~p~~~~~ad~l 402 (1425)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998843 45544455544
No 99
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=330.19 Aligned_cols=205 Identities=26% Similarity=0.316 Sum_probs=177.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC----ccceEEEEccCC--CCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV----PQRTAAYISQHD--VHIG 208 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 208 (1425)
++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+|++ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999998 999999998776543 347799999985 6789
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
..||++.|.-+.+..+.. +.+.++.++++.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHHH----hc
Confidence 999999998765543221 11223677899999986432 45
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.+..|||||||||+|||||..+|++|++|||||+||+..+.+|++.|.++.+.. +.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeee
Confidence 667899999999999999999999999999999999999999999999998765 4556668999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 047682 369 EGQIVFQGPREHVLE 383 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~ 383 (1425)
+|++++.++.+++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999999864
No 100
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-37 Score=362.40 Aligned_cols=210 Identities=25% Similarity=0.387 Sum_probs=178.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999998865443 3679999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+....... . ...+...+++++++.+||++..++.+ ..
T Consensus 92 ~eni~~~~~~~~~~~~------~------------------------~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------P------------------------NAAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccC------C------------------------CHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 9999997543110000 0 00112335678999999987776554 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELK-FTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876444 4555589999999999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 101
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-37 Score=342.04 Aligned_cols=210 Identities=29% Similarity=0.405 Sum_probs=175.6
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4567776652 2469999999999999999999999999999999999765 358999999987543
Q ss_pred -ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 908 -ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 908 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
...++.++|++|++.+++.+|++|++.+..... ....+..++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 223457899999998889999999998765332 1233344556789999999988777653 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999986 57788999999997 5666654
No 102
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-37 Score=354.29 Aligned_cols=203 Identities=20% Similarity=0.261 Sum_probs=154.8
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
-.+.+.+|.+.++ | +.-+++.+++..++.-...+++|+||+||||+++++.|... +..|-+.+.+
T Consensus 361 p~l~i~~V~f~y~-p----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~-- 425 (582)
T KOG0062|consen 361 PNLRISYVAFEYT-P----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP-- 425 (582)
T ss_pred CeeEEEeeeccCC-C----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--
Confidence 3577888877664 1 11168899999999999999999999999999999998654 2356665543
Q ss_pred CCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCcCCHHH
Q 047682 905 KKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 905 ~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGq 983 (1425)
++.++|-.|...-+..+.|.+- .+...++ ++...++ .++-+..+||..- +.. .+.+|||||
T Consensus 426 ------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~~ee----~r~hl~~~Gl~g~la~~-----si~~LSGGQ 487 (582)
T KOG0062|consen 426 ------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKTEEE----IRRHLGSFGLSGELALQ-----SIASLSGGQ 487 (582)
T ss_pred ------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCCHHH----HHHHHHhcCCCchhhhc-----cccccCCcc
Confidence 4568999998665555555443 3333333 2223332 4667788898642 222 256899999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|-||++|.....+|.+|+|||||+.||-.+-..+-++|++. +..||+++|+-+. +-..|+.+++.++|...-+.|.
T Consensus 488 KsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 488 KSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred hhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 99999999999999999999999999999999999999876 5689999999764 7789999999999877666665
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 564 ~ 564 (582)
T KOG0062|consen 564 I 564 (582)
T ss_pred H
Confidence 3
No 103
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=342.48 Aligned_cols=214 Identities=24% Similarity=0.338 Sum_probs=188.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
+.++|++|.++ ++..+|+|+|+.|++|+.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~------------~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYP------------GRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcC------------CCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 67889988874 125799999999999999999999999999999999997663 4799999998854
Q ss_pred ----cccccceEEEeecCCCC-CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 ----QETFARISGYCEQNDIH-SPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ----~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
....++.+|||+|++.. +..-||.|.+.|+..- ...+.++.+++++++++.+++.+.++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 34567889999999754 4577999999998643 3566677889999999999999998876 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |.|||++|||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999986 58888999999997 68899
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 104
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.7e-37 Score=342.61 Aligned_cols=207 Identities=24% Similarity=0.338 Sum_probs=174.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888877631 12469999999999999999999999999999999999765 34799999998753
Q ss_pred c---c---cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q---E---TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. . .+++.++|++|++.+++.+||.||+.+....+ ....++.++.++++++.++|.+..+... ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1 24567999999999999999999998875433 1233344566889999999988777653 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 577789999999874
No 105
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-37 Score=362.38 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=185.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887663 2469999999999999999999999999999999999765 34799999998764
Q ss_pred c-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 907 Q-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 907 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
. ...++.+|||+|++.++|.+||+||+.|....+.. ...+.++.++.++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 3 22346799999999999999999999987653211 1234455667789999999999887776 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++.+.+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999996 68899999999996 68899998
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 106
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.2e-37 Score=359.47 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=176.6
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCC
Q 047682 851 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ--ETFARISGYCEQNDIHSPNVT 928 (1425)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 928 (1425)
++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999765 358999999987543 234567999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 047682 929 VYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1008 (1425)
Q Consensus 929 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsg 1008 (1425)
|+|++.+.+.++ .....+.++.++++++.++|.+..+..+ +.||||||||++||+||+++|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLY---GLPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 999999876554 2233444566889999999988777764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1009 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1009 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 68889999999997 688999975
No 107
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.2e-37 Score=363.25 Aligned_cols=214 Identities=22% Similarity=0.320 Sum_probs=186.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999766 3589999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.++.++++++.++|.+..+.. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 223577999999999999999999999976533 234455566789999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||+|+.+|++|+|||||||||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68899999999996 68899998
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 108
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-37 Score=340.56 Aligned_cols=200 Identities=27% Similarity=0.388 Sum_probs=171.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYE 931 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 931 (1425)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999765 348999999987642 3567899999998888999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 047682 932 SLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1011 (1425)
Q Consensus 932 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~ 1011 (1425)
|+.+....+ ....+...+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 998865433 1233344566889999999987766653 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeC-CcEEEEECCC
Q 047682 1012 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGYEIYVGPL 1064 (1425)
Q Consensus 1012 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~-Gg~~~y~G~~ 1064 (1425)
.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 57788999999995 3788887765
No 109
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=331.16 Aligned_cols=225 Identities=26% Similarity=0.383 Sum_probs=191.3
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc----ceEEEEccC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ----RTAAYISQH 203 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~ 203 (1425)
.++.+..++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|+
T Consensus 11 ~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~ 87 (250)
T COG0411 11 SKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQI 87 (250)
T ss_pred eeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccc
Confidence 44556788999999999999999999999999999999999999999 99999999999887764 457888999
Q ss_pred CCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 204 DVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
...|++|||.||+.-++..+.. +.......+- ..+..+...+...+|+.+||.+.+|+
T Consensus 88 ~rlF~~lTVlENv~va~~~~~~---~~~~l~~~~~-------------------~~~e~~~~e~A~~~Le~vgL~~~a~~ 145 (250)
T COG0411 88 TRLFPGLTVLENVAVGAHARLG---LSGLLGRPRA-------------------RKEEREARERARELLEFVGLGELADR 145 (250)
T ss_pred ccccCCCcHHHHHHHHhhhhhh---hhhhhccccc-------------------hhhHHHHHHHHHHHHHHcCCchhhcc
Confidence 9999999999999998764421 1111111000 00112334567789999999999999
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
..|+ ||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+. ++.+|+.+-|+..-++++|||
T Consensus 146 ~A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dr 219 (250)
T COG0411 146 PAGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADR 219 (250)
T ss_pred hhhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccE
Confidence 9886 9999999999999999999999999999999999999999999999763 456777789999999999999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 047682 364 IILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~~ 383 (1425)
|+||+.|+++.+|+++++.+
T Consensus 220 i~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 220 IVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred EEeccCCcCcccCCHHHHhc
Confidence 99999999999999999864
No 110
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-38 Score=319.61 Aligned_cols=206 Identities=27% Similarity=0.366 Sum_probs=182.3
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeecCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCEQNDIHSP 925 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 925 (1425)
++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.++... ..+..+||+||+...|-
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 456899999999999999999999999999999999997663 489999999986542 22345899999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 047682 926 NVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEP 1005 (1425)
.+||+||++-....+.. +....++++.++++|+.+++.|+++... ..||||||+|+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999877666532 3334566777899999999999999873 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1006 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
++|+||-+-..|.++++.+.+.|.-|++|-|+-. |....+||.+++.+ |++..+|.+.
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999987 79999999999997 6889999874
No 111
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.7e-37 Score=356.04 Aligned_cols=214 Identities=27% Similarity=0.379 Sum_probs=183.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478888887763 2469999999999999999999999999999999999765 3489999999875
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.. ...++.+||++|++.+++.+||+|++.+.+... ..+..+.++.++++++.++|.+..+..+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 234567999999999999999999998755432 1233444456788999999988777764 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999997 67789999999996 68899997
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 112
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3e-37 Score=313.56 Aligned_cols=200 Identities=24% Similarity=0.380 Sum_probs=177.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
.++|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|+||+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999999 999999999987653 258999999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+..||.||++|+.+..|.. ..+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKP----------------------------------PREIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCC----------------------------------HHHHHHHHHHHHHHhccchhhhcC---
Confidence 9999999999998776532 123456788999999999887644
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+..|||||||||+||||++.+|++|+-||||-.||+.++.+|++.+.++.+ .+|+|+..+|+..-+..+-.+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 456999999999999999999999999999999999999999999999965 3666776789988888888899999
Q ss_pred cCCeEEEecC
Q 047682 368 SEGQIVFQGP 377 (1425)
Q Consensus 368 ~~G~iv~~G~ 377 (1425)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987543
No 113
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-37 Score=338.68 Aligned_cols=209 Identities=25% Similarity=0.425 Sum_probs=176.3
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4667776652 2469999999999999999999999999999999999765 358999999987643
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHH
Q 047682 908 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRL 987 (1425)
Q Consensus 908 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl 987 (1425)
..++.++|++|+..+++.+|++||+.+....+. ....+.++.++++++.+++.+..+.. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345678999999999999999999988654431 23334455688999999998776665 357999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 988 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 988 ~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 57788999999997 5666654
No 114
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.2e-37 Score=358.91 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=177.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999876432 2467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.+...+.. . .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMS----------T------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 999999755432210 0 0112235668899999988887775
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+++|++++|||||+|||+.++.++++.|+++.+ . +++|+.++|...++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999865 3 4455557899999999999999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 115
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-37 Score=344.96 Aligned_cols=207 Identities=28% Similarity=0.394 Sum_probs=173.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 45999999999999999999999999999999999999998 999999999876532 246799999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++.+.... ... .+....++.+++.+||++..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTR---------LSE------------------------EEIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccC---------CCH------------------------HHHHHHHHHHHHHcCCchhhcCChh-
Confidence 999999999986432100 000 0112345678899999876666554
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.++||+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEEE
Confidence 5999999999999999999999999999999999999999999999865434 44555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999987763
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=360.99 Aligned_cols=215 Identities=24% Similarity=0.352 Sum_probs=187.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++..++ +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488899887663 2469999999999999999999999999999999999866 3589999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.. ...+|.+|||+|++.++|.+||.||+.|....+ ..+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999976533 234556667789999999999887776 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||||+.+|++|+|||||||||..++..+.+.|+++.+ .|.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 68899999999996 68899998
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 63
No 117
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-37 Score=311.29 Aligned_cols=196 Identities=26% Similarity=0.326 Sum_probs=171.4
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHHHHH
Q 047682 857 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-ETFARISGYCEQNDIHSPNVTVYESLLY 935 (1425)
Q Consensus 857 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~ 935 (1425)
.+++.|++||++||+||||||||||||+|+|...+ .+|+|.|||.+... ....|-++.++|+..+|..+||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 47788999999999999999999999999998764 48999999998654 3456778999999999999999999976
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 047682 936 SAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1015 (1425)
Q Consensus 936 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~ 1015 (1425)
+..- ....+ .+.++.++.++..+||..+.+.+. ..||||||||+++||+|+++-+||+||||+|.||+.-+.
T Consensus 95 Gl~P--~LkL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSP--GLKLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCc--ccccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 5321 11223 344567899999999999988874 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1016 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1016 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
++...+.+++++ +.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999854 899999999997 79999999999997 799999986
No 118
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-37 Score=363.97 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=178.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
..+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998866443 4789999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
.||+.|+.+..+.. ..+...+++++++.+||.+..+..+ ++
T Consensus 109 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99999976532210 0112335678999999987766554 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++|+|||||++||..++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999876555 4555578999999999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 119
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-37 Score=340.15 Aligned_cols=212 Identities=29% Similarity=0.385 Sum_probs=178.9
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 4677776652 2469999999999999999999999999999999999765 348999999976532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 908 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
...++.++|++|+..+++.+||+|++.+....+ ..+.++.++.++++++.++|.+..+..+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 233467899999999999999999998875443 2233344556889999999987777653 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57788999999997 677888764
No 120
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-36 Score=338.21 Aligned_cols=210 Identities=26% Similarity=0.386 Sum_probs=176.5
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 4677776653 2469999999999999999999999999999999999765 358999999987543
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 908 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 908 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 22457999999998888999999998765432 1233444566788999999987777653 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999986 57788999999987 5777765
No 121
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6e-37 Score=357.24 Aligned_cols=206 Identities=29% Similarity=0.395 Sum_probs=177.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+++|+|+|+.|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875421 2457999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.++..+... .+....++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765432100 0112346778999999987777665
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+++|++++|||||+|||+.++..+++.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999865 3 4555667889999999999999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988765
No 122
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=359.55 Aligned_cols=217 Identities=22% Similarity=0.300 Sum_probs=183.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|++++++.. ..++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678888776310 113579999999999999999999999999999999999865 35899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
.. ..++.+||++|+..+++.+||+||+.+....+ ..+.++.++.++++++.+||.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 21 23567999999999999999999999875443 233444556788999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999996 6888
Q ss_pred EECCC
Q 047682 1060 YVGPL 1064 (1425)
Q Consensus 1060 y~G~~ 1064 (1425)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99875
No 123
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-37 Score=326.46 Aligned_cols=217 Identities=26% Similarity=0.350 Sum_probs=179.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++.+|++..++... ....+|+|||++|.+||++||+|+||||||||.++|+|...+ ..|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 367888887764221 112599999999999999999999999999999999997663 589999999875
Q ss_pred Ccc----cccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCc
Q 047682 906 KQE----TFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSG 978 (1425)
Q Consensus 906 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 978 (1425)
... .+.+.+.+|+||+. +.|..||++.|.-.... .+.++.+++ +.++++.+||.+- .+.. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~~--i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQR--IAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHHH--HHHHHHHcCCCHHHHhcC-----chh
Confidence 432 46778999999974 56899999998755432 233343333 8999999999753 3332 457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
||||||||++|||||+.+|++|+||||||.||+..+..|++.|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 789999999987 47789999999997 68
Q ss_pred EEEECCCC
Q 047682 1058 EIYVGPLG 1065 (1425)
Q Consensus 1058 ~~y~G~~~ 1065 (1425)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 124
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-36 Score=342.65 Aligned_cols=215 Identities=27% Similarity=0.360 Sum_probs=178.4
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4567766552 2469999999999999999999999999999999999765 347999999987543
Q ss_pred c---c-ccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCC-------CCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 047682 908 E---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPD-------VDSETRRMFLEEIMELVELNPLRQSLVGLPGV 976 (1425)
Q Consensus 908 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 976 (1425)
. . .++.++|++|++.+++.+||+|++.+....+.... ....+.++.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 1 1 23468999999999999999999988654321110 12334455688999999998776665 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877999999999997 57788999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 78888875
No 125
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=361.80 Aligned_cols=215 Identities=25% Similarity=0.363 Sum_probs=184.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999765 3479999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.. ...++.+||++|+..+++.+||+||+.|....+ ..+.++.++.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 123467999999999999999999999876543 2334455567899999999988777763 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68889999999996 68889998
Q ss_pred CC
Q 047682 1064 LG 1065 (1425)
Q Consensus 1064 ~~ 1065 (1425)
+.
T Consensus 218 ~~ 219 (369)
T PRK11000 218 PL 219 (369)
T ss_pred HH
Confidence 63
No 126
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-37 Score=363.34 Aligned_cols=206 Identities=26% Similarity=0.404 Sum_probs=177.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45999999999999999999999999999999999999998 9999999998865433 4679999999999999999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.|+.+..+.. . .+...+++++++.+||++..++.++ .
T Consensus 93 ~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~lgL~~~~~~~~~-----~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------K------------------------EEINQRVNQVAEVLQLAHLLDRKPK-----A 133 (369)
T ss_pred HHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 99999975432210 0 0112346778999999877776554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+..+. +++.++|+..++.+++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~-tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGR-TMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCC-EEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998764444 455578888999999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 127
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.3e-38 Score=319.52 Aligned_cols=213 Identities=22% Similarity=0.367 Sum_probs=182.5
Q ss_pred CccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc----ceEEEEccCC
Q 047682 129 SRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ----RTAAYISQHD 204 (1425)
Q Consensus 129 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d 204 (1425)
++.+++++++|||+.+++||+++|+|||||||||...++.|+..|+ +|+|.+||.+++.+... ..+||+||+.
T Consensus 12 K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~ 88 (243)
T COG1137 12 KSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEA 88 (243)
T ss_pred HhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccc
Confidence 3345567999999999999999999999999999999999999999 99999999999887653 4589999999
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
..|-.+||+|||.-..+.+.... ...+.+.+.+.+|+.|.|.++++..
T Consensus 89 SIFr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~ 136 (243)
T COG1137 89 SIFRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSK 136 (243)
T ss_pred hHhhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCc
Confidence 99999999999987654331100 0012234577899999999999865
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
-. .||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.+. +.-|+..-|...|+.++|||.
T Consensus 137 a~-----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r--giGvLITDHNVREtL~i~dRa 209 (243)
T COG1137 137 AY-----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR--GIGVLITDHNVRETLDICDRA 209 (243)
T ss_pred cc-----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC--CceEEEccccHHHHHhhhheE
Confidence 43 49999999999999999999999999999999999999999999998652 444555678899999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
+++++|++..+|+++++.+
T Consensus 210 YIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 210 YIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEEecCeEEecCCHHHHhc
Confidence 9999999999999999864
No 128
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=356.98 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=176.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999998 9999999998865432 36799999998899
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------K------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 9999999999875432210 0 011234677899999987776655
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELG-LTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 45999999999999999999999999999999999999999999999876434 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 129
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=351.51 Aligned_cols=230 Identities=23% Similarity=0.395 Sum_probs=191.2
Q ss_pred cCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCC
Q 047682 79 VGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPAS 158 (1425)
Q Consensus 79 ~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 158 (1425)
.....++..+.|+|+++.++. .+++|+||||++.||+.+||+||||+
T Consensus 529 ~pl~~~~G~i~fsnvtF~Y~p---------------------------------~k~vl~disF~v~pGktvAlVG~SGa 575 (790)
T KOG0056|consen 529 PPLKVTQGKIEFSNVTFAYDP---------------------------------GKPVLSDISFTVQPGKTVALVGPSGA 575 (790)
T ss_pred CCccccCCeEEEEEeEEecCC---------------------------------CCceeecceEEecCCcEEEEECCCCC
Confidence 334457789999999998743 35699999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHh
Q 047682 159 GKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVEL 235 (1425)
Q Consensus 159 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 235 (1425)
||||+|++|-++.+.+ +|.|+++|++++... .|+.||.|||+..+ ++.|+..||.|+.
T Consensus 576 GKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvL-FNdTI~yNIryak--------------- 636 (790)
T KOG0056|consen 576 GKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVL-FNDTILYNIRYAK--------------- 636 (790)
T ss_pred chhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCccee-ecceeeeheeecC---------------
Confidence 9999999999999988 999999999987543 46789999996554 4669999999862
Q ss_pred hHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeE
Q 047682 236 SRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALF 315 (1425)
Q Consensus 236 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~ill 315 (1425)
|++..|++..|+. +....| +++++++.++|+||+++.+ |||||||||+|||+++..|.+++
T Consensus 637 ----------~~AsneevyaAAk-----AA~IHd---rIl~fPegY~t~VGERGLk-LSGGEKQRVAiARtiLK~P~iIl 697 (790)
T KOG0056|consen 637 ----------PSASNEEVYAAAK-----AAQIHD---RILQFPEGYNTRVGERGLK-LSGGEKQRVAIARTILKAPSIIL 697 (790)
T ss_pred ----------CCCChHHHHHHHH-----HhhHHH---HHhcCchhhhhhhhhcccc-cCCcchhhHHHHHHHhcCCcEEE
Confidence 3333333333221 112223 4588999999999999997 99999999999999999999999
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHH
Q 047682 316 MDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 316 LDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 383 (1425)
|||.||+||..+...|..+|.+++. ++|+|+.. |+..+.-.+|.|+++++|+|++.|.++|++.
T Consensus 698 LDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 698 LDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADLILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccEEEEEeCCeEeecCcHHHHHh
Confidence 9999999999999999999999986 67887743 3345667899999999999999999999975
No 130
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.3e-36 Score=338.75 Aligned_cols=215 Identities=27% Similarity=0.418 Sum_probs=178.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4677887766310 011269999999999999999999999999999999999765 34899999998754
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 907 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..+.. +..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 234567999999999999999999998765433 223444556788999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999997 5666543
No 131
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.6e-36 Score=341.28 Aligned_cols=212 Identities=28% Similarity=0.375 Sum_probs=178.4
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4667776652 2469999999999999999999999999999999999765 347999999987532
Q ss_pred c---c-ccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 908 E---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 908 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
. . .++.++|++|++.+++.+||+||+.+....+ .......++.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIR---GLSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 2346899999999999999999998764332 122334455678999999998776665 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999997 68889999999986 67888887
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 132
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-36 Score=352.89 Aligned_cols=213 Identities=23% Similarity=0.370 Sum_probs=183.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~ 66 (301)
T TIGR03522 2 SIRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDV 66 (301)
T ss_pred EEEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 367888887763 3469999999999999999999999999999999999765 3589999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++.++.++++++.+||.+..+..+ +.|||||
T Consensus 67 ~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~ 138 (301)
T TIGR03522 67 LQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGY 138 (301)
T ss_pred ccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHH
Confidence 43 2345679999999999999999999998776542 233444556889999999998887764 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|||++||++|+++|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~ 215 (301)
T TIGR03522 139 RQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKK 215 (301)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999865 799999999996 68889999999996 68899998
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 216 ~ 216 (301)
T TIGR03522 216 L 216 (301)
T ss_pred H
Confidence 6
No 133
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-36 Score=357.80 Aligned_cols=203 Identities=24% Similarity=0.294 Sum_probs=178.2
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc---cc----cceEEEeecCCCC
Q 047682 851 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE---TF----ARISGYCEQNDIH 923 (1425)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~~ 923 (1425)
.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.... .. ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999876 3589999999876532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 047682 924 SPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1425)
Q Consensus 924 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLD 1003 (1425)
+|.+||+||+.|..... ..+.++.++++.++++.++|.+..+.. +..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 345556677889999999998877776 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1004 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|||++||+.++..+++.++++.++ |+|||++||++. ++.+.+|++++|++ |+++..|++.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 999999999999999999998754 899999999986 57889999999986 6889999753
No 134
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=340.93 Aligned_cols=217 Identities=28% Similarity=0.390 Sum_probs=180.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887763 2469999999999999999999999999999999999765 3589999999875
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+.++.++++++.++|.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHH
Confidence 431 2245689999999988899999999886543211 0012233445678899999998776665 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999865 899999999986 57788999999986 6788888
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 135
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-36 Score=361.42 Aligned_cols=218 Identities=28% Similarity=0.361 Sum_probs=184.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 377888887763 3579999999999999999999999999999999999765 3589999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.+||++|+..+++.+||+|++.+....... .....+..++.++++++.+++.+..+.. ++.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCH
Confidence 43 34567799999999998999999999875321100 0111233456789999999999888776 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999997 58889999999996 678899
Q ss_pred CCCC
Q 047682 1062 GPLG 1065 (1425)
Q Consensus 1062 G~~~ 1065 (1425)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9864
No 136
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.8e-36 Score=337.71 Aligned_cols=221 Identities=37% Similarity=0.624 Sum_probs=180.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-ceEEEEEEEcCccC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNIKISGYPK 905 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~-~~~~G~i~i~g~~~ 905 (1425)
+.|+|+++.++.. +..+.+|+|+|++|++||+++|+||||||||||+++|+|..+. .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577887776311 0135799999999999999999999999999999999997541 13589999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHH-HHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEE-IMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
.....++.++|++|++.+++.+||+||+.+......+...........+++ .++.+++.+..+.. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998765433222222223334555 88889988776654 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999985468899999999997 6777765
No 137
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-36 Score=337.99 Aligned_cols=207 Identities=29% Similarity=0.425 Sum_probs=171.5
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 467777666310 011469999999999999999999999999999999999765 358999999987542
Q ss_pred c------c-ccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 908 E------T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 908 ~------~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. . .++.++|++|++.+++.+||+|++.+....+ .......++.++++++.+||.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLA---GVPKKERRERAEELLERVGLGDRLNHY-----PSELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcC
Confidence 1 1 2457999999999999999999999876543 122333455688999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999987 5899999999986 35 489999999975
No 138
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.9e-36 Score=339.46 Aligned_cols=213 Identities=24% Similarity=0.280 Sum_probs=176.1
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCC-----CCceEEEEEEEcC
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNIKISG 902 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~-----~~~~~~G~i~i~g 902 (1425)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4667766552 236999999999999999999999999999999999976 3 4589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ..+++.++|++|++.++ .+||+||+.+....+. ....++.++.++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999998887 7999999988654331 11222234567899999999876655421 25
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999876 99999999986 57788999999997 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 8888875
No 139
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.9e-36 Score=334.80 Aligned_cols=206 Identities=28% Similarity=0.391 Sum_probs=173.8
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4667776652 2469999999999999999999999999999999999765 358999999987542
Q ss_pred -ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 908 -ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 908 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKK-----VKGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhh-----HhhCCHHHHHH
Confidence 2335678999999988999999999987654321 1 124478899999998877765 34799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877899999999986 57778999999997 5777654
No 140
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=321.34 Aligned_cols=208 Identities=25% Similarity=0.402 Sum_probs=173.6
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc----ceEEEEccCCCCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ----RTAAYISQHDVHI 207 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 207 (1425)
++.+||+|||+++++||+++|+||||+|||||||+|+|..++. +|+|.++|++++...+. +.++||||....|
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 4467999999999999999999999999999999999999987 99999999999887653 5699999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC-Cccccccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLG-LDVCADTMVG 286 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg 286 (1425)
+.|||+|||..++..... .. . ...+ .|.+.+.|= |.+-.+..-|
T Consensus 91 ~~LTVeENL~~g~~~~~~-~~----------~------~~~~------------------~e~v~~lFP~Lker~~~~aG 135 (237)
T COG0410 91 PRLTVEENLLLGAYARRD-KE----------A------QERD------------------LEEVYELFPRLKERRNQRAG 135 (237)
T ss_pred hhCcHHHHHhhhhhcccc-cc----------c------cccc------------------HHHHHHHChhHHHHhcCccc
Confidence 999999999987543210 00 0 0000 222333331 3333455555
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+.. +.+|+.+.|......+++|+.++
T Consensus 136 -----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~-g~tIlLVEQn~~~Al~iaDr~yv 209 (237)
T COG0410 136 -----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEG-GMTILLVEQNARFALEIADRGYV 209 (237)
T ss_pred -----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcC-CcEEEEEeccHHHHHHhhCEEEE
Confidence 499999999999999999999999999999999999999999999997643 46777789999999999999999
Q ss_pred EcCCeEEEecChhHHHH
Q 047682 367 ISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~~ 383 (1425)
|.+|+|++.|+.+++.+
T Consensus 210 le~Griv~~G~~~eL~~ 226 (237)
T COG0410 210 LENGRIVLSGTAAELLA 226 (237)
T ss_pred EeCCEEEEecCHHHHhc
Confidence 99999999999998863
No 141
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=339.37 Aligned_cols=217 Identities=24% Similarity=0.320 Sum_probs=180.4
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5677887765310 011369999999999999999999999999999999999865 35799999998754
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
.. ..++.++|++|++.+++.+|++||+.+....+ ........+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIA---GVPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 21 23567899999999999999999998865433 123344455678999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999986 6888
Q ss_pred EECCC
Q 047682 1060 YVGPL 1064 (1425)
Q Consensus 1060 y~G~~ 1064 (1425)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 142
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.9e-36 Score=334.98 Aligned_cols=206 Identities=26% Similarity=0.358 Sum_probs=173.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56778877652 12469999999999999999999999999999999999765 34899999998754
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
.. .+++.++|++|++.+++.+|++||+.+....+ .......++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 24567999999999999999999998875432 123334456688999999998766655 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999875
No 143
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.6e-36 Score=349.96 Aligned_cols=206 Identities=25% Similarity=0.381 Sum_probs=174.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999999998 999999998875322 2467999999988889999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.....+.. . .+....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMS----------T------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 999998754322110 0 0111235668889999888777665
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999865 3 4455667888899999999999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+.+++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 144
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9e-37 Score=320.71 Aligned_cols=212 Identities=25% Similarity=0.401 Sum_probs=191.7
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
+++++|+.++ +++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+..
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchh
Confidence 5667766544 45789999999999999999999999999999999999876 45899999999887
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 907 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
+.. +.++||.|.+.-++|.+||.|.|.|-|.|+ .++.++.+..++.+|+.+++......+ ++.||-|++|+
T Consensus 68 ~~~-~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQK 138 (300)
T COG4152 68 QEI-KNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQK 138 (300)
T ss_pred hhh-hhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHH
Confidence 643 456899999999999999999999999887 577788888899999999999887776 46799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+.+-.+++++|++++||||+|||||.+.+.+.+.+.++.+.|.|||+++|+++ .+-++||++++|++ |+.|.+|+.
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999999999999999999997 68999999999997 678899986
No 145
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=342.05 Aligned_cols=204 Identities=28% Similarity=0.330 Sum_probs=170.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc------ccccceEEEeecCCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ------ETFARISGYCEQNDIHSP 925 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 925 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999765 347999999987542 123567899999999999
Q ss_pred CCCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEE
Q 047682 926 NVTVYESLLYSAWLRL-----PPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1000 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~il 1000 (1425)
.+||+||+.+...... .........++.+.++++.++|.+..+.. +..||||||||++||++|+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 00111223345678899999998766654 4579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1001 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1001 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999997 57779999999997 678888875
No 146
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=334.92 Aligned_cols=200 Identities=29% Similarity=0.443 Sum_probs=167.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999998 9999999998764332 4579999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.++....+.. . ......++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------K------------------------AEIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 99999864321100 0 0012235678899999877666554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELG-ITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875434 4555578888899999999999999999
Q ss_pred EEec
Q 047682 373 VFQG 376 (1425)
Q Consensus 373 v~~G 376 (1425)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 147
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.3e-36 Score=335.97 Aligned_cols=213 Identities=24% Similarity=0.389 Sum_probs=178.0
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++. .++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 46677766531 11469999999999999999999999999999999999765 358999999987543
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 908 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
..+++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999998889999999988654331 233334456789999999987776653 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 699999999996 57788999999987 678888875
No 148
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-36 Score=337.45 Aligned_cols=210 Identities=30% Similarity=0.439 Sum_probs=172.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999998 9999999998754332 3579999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.++....+...+ + + ..+....++.+++.+||++..++.++ .
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~--~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------P--P-----------EAEIRAKVHELLKLVQLDWLADRYPA-----Q 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------C--C-----------HHHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 9999986532211000 0 0 00112245678899999876665554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-vii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVT-TVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987643444 55577888889999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
++.|+.+++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 149
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.4e-36 Score=338.67 Aligned_cols=214 Identities=21% Similarity=0.334 Sum_probs=180.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56778777652 2469999999999999999999999999999999999765 35899999998754
Q ss_pred c-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 Q-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
. ...++.++|++|++.+++.+||+||+.+..... ......+.++.+.++++.+||.+..+.. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV--RGASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 233567999999999899999999998754211 1223344456688999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999996 688898
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 150
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-36 Score=385.45 Aligned_cols=225 Identities=22% Similarity=0.404 Sum_probs=190.2
Q ss_pred eeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHH
Q 047682 86 IEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLL 165 (1425)
Q Consensus 86 ~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 165 (1425)
.+|.|+|+++.+.. +++.+||+|+|+++++|+.+||+|||||||||...
T Consensus 986 G~I~~~~V~F~YPs-------------------------------RP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~ 1034 (1228)
T KOG0055|consen 986 GDIEFRNVSFAYPT-------------------------------RPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVIS 1034 (1228)
T ss_pred eEEEEeeeEeeCCC-------------------------------CCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHH
Confidence 56999999987632 23467999999999999999999999999999999
Q ss_pred HHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhc
Q 047682 166 ALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDA 242 (1425)
Q Consensus 166 ~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 242 (1425)
+|-..++|+ +|.|.+||+++++.+. |+++|.|+|+|.+| +.|+||||.||.+.
T Consensus 1035 LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF-~~TIrENI~YG~~~-------------------- 1090 (1228)
T KOG0055|consen 1035 LLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLF-NGTIRENIAYGSEE-------------------- 1090 (1228)
T ss_pred HHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCchhh-cccHHHHHhccCCC--------------------
Confidence 999999998 9999999999998875 58899999998877 55999999998210
Q ss_pred CCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCC
Q 047682 243 NIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTG 322 (1425)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsg 322 (1425)
.+.+++++|+... ...+.+ .+|++.+||.||+++.. ||||||||++||||+++||+||||||.||+
T Consensus 1091 -----vs~~eIi~Aak~A-----NaH~FI---~sLP~GyDT~vGerG~Q-LSGGQKQRIAIARAilRnPkILLLDEATSA 1156 (1228)
T KOG0055|consen 1091 -----VSEEEIIEAAKLA-----NAHNFI---SSLPQGYDTRVGERGVQ-LSGGQKQRIAIARAILRNPKILLLDEATSA 1156 (1228)
T ss_pred -----CCHHHHHHHHHHh-----hhHHHH---hcCcCcccCccCcccCc-CCchHHHHHHHHHHHHcCCCeeeeeccchh
Confidence 1223334443221 223333 57999999999998875 999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHH
Q 047682 323 LDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 323 LD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 383 (1425)
||+++...+.+.|++... ++|+|++ .|+..+.+.+|.|+|+++|+|+++|+++++++
T Consensus 1157 LDseSErvVQeALd~a~~--gRT~IvI--AHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1157 LDSESERVVQEALDRAME--GRTTIVI--AHRLSTIQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred hhhhhHHHHHHHHHHhhc--CCcEEEE--ecchhhhhcCCEEEEEECCEEEecccHHHHHh
Confidence 999999999999999753 6787774 34556889999999999999999999999985
No 151
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-36 Score=335.59 Aligned_cols=216 Identities=24% Similarity=0.323 Sum_probs=178.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~ 74 (233)
T PRK11629 6 LQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMS 74 (233)
T ss_pred EEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcC
Confidence 7888988876310 011469999999999999999999999999999999999765 35899999998754
Q ss_pred ccc------c-cceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcC
Q 047682 907 QET------F-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGL 979 (1425)
Q Consensus 907 ~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 979 (1425)
... . ++.++|++|+..+++.+|++||+.+....+ ....++.++.++++++.+||.+..+.. +..|
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 146 (233)
T PRK11629 75 KLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSEL 146 (233)
T ss_pred cCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 311 2 256899999998899999999998865432 223344456788999999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 980 SgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++ |++
T Consensus 147 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~i 223 (233)
T PRK11629 147 SGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GRL 223 (233)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999875 5899999999986 34 44689999986 688
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
+..|+.
T Consensus 224 ~~~~~~ 229 (233)
T PRK11629 224 TAELSL 229 (233)
T ss_pred EEEecc
Confidence 888875
No 152
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=335.90 Aligned_cols=205 Identities=30% Similarity=0.404 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999998 999999998765321 2357999999988899999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+..+..+.. ..+....++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVP----------------------------------GAERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 999999865432110 00112346778999999877776654
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFG-MTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 5999999999999999999999999999999999999999999999876434 455557888889999999999999999
Q ss_pred EEEecChhHH
Q 047682 372 IVFQGPREHV 381 (1425)
Q Consensus 372 iv~~G~~~~~ 381 (1425)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 153
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.6e-36 Score=334.24 Aligned_cols=205 Identities=26% Similarity=0.384 Sum_probs=172.4
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4567776652 12469999999999999999999999999999999999765 358999999986532
Q ss_pred ------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 908 ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 908 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
..+++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+++.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCH
Confidence 1245679999999999999999999988754331 23344456688999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999777999999999986 577789999999874
No 154
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-36 Score=333.56 Aligned_cols=191 Identities=29% Similarity=0.390 Sum_probs=162.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCC-CCCCCCHH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDI-HSPNVTVY 930 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 930 (1425)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999765 358999999987644344567999999974 34467999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 047682 931 ESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1010 (1425)
Q Consensus 931 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD 1010 (1425)
||+.+..... . . ..+.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 124578899999998877765 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 1011 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 1011 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++| ++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~G-~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLANG-AI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999777999999999986 577789999999974 54
No 155
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4e-36 Score=383.41 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=168.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|++.+| +.|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HGT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-CcC
Confidence 5899999999999999999999999999999999999 87 9999999999987654 57899999976655 569
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++|||.++. |+.+.+++.+++...+ .+..+ -.|++..||.||+++.
T Consensus 439 I~eNI~~g~-------------------------~~~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~G~- 484 (588)
T PRK11174 439 LRDNVLLGN-------------------------PDASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQAA- 484 (588)
T ss_pred HHHHhhcCC-------------------------CCCCHHHHHHHHHHhC------HHHHH--HhcccccccccccCCC-
Confidence 999999862 1122233333332211 11122 2467788999998765
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||||++++|+|++||||||+||+.++..|.+.|+++.+ ++|+|++ +|.. +..+.||+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiI-tHrl-~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMV-THQL-EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEE-ecCh-HHHHhCCEEEEEeCCe
Confidence 5999999999999999999999999999999999999999999988743 5666664 4444 5677899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++++|+++++.+
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999999874
No 156
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=345.07 Aligned_cols=224 Identities=27% Similarity=0.390 Sum_probs=180.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-------CccceEEEEccCC-CC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-------VPQRTAAYISQHD-VH 206 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 206 (1425)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+++.. ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987531 1246799999985 34
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTMV 285 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~v 285 (1425)
+...||.||+.|+.+..+.. + .+...+++++++.+||. ...++.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------K------------------------EKAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhccCC-
Confidence 45579999999975432210 0 11223467788999996 344443
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 456999999999999999999999999999999999999999999998864 3 4455667888889999999999
Q ss_pred EEcCCeEEEecChhHHH---HHHHhCCCCCCCCCCHHHHH
Q 047682 366 LISEGQIVFQGPREHVL---EFFKSMGFECPKRKGVADFL 402 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~---~~F~~~G~~~p~~~~~ad~l 402 (1425)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999874 34556677776654444433
No 157
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=346.26 Aligned_cols=218 Identities=23% Similarity=0.351 Sum_probs=176.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-------CccceEEEEccCC-C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-------VPQRTAAYISQHD-V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 205 (1425)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999998 99999999987531 1235799999985 2
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
.+...||+||+.|+.+..+.. ..+....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhhCC
Confidence 455679999999875432110 001123467789999996 445554
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g-~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKG-LTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999876434 45555788899999999999
Q ss_pred EEEcCCeEEEecChhHHH---HHHHhCCCCCCC
Q 047682 365 ILISEGQIVFQGPREHVL---EFFKSMGFECPK 394 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~---~~F~~~G~~~p~ 394 (1425)
++|++|+++++|+++++. +.+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999988874 233344554443
No 158
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.5e-36 Score=340.28 Aligned_cols=214 Identities=27% Similarity=0.369 Sum_probs=179.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999765 34799999998653
Q ss_pred c-----------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 047682 907 Q-----------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG 975 (1425)
Q Consensus 907 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 975 (1425)
. ...++.++|++|++.+++..|++||+.+...... ....+..++.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235578999999999999999999987542111 123344456688999999998766654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 57788999999997
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 678888875
No 159
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-36 Score=346.10 Aligned_cols=219 Identities=21% Similarity=0.303 Sum_probs=180.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13637 2 SIKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDI 71 (287)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 36788888876311 0012469999999999999999999999999999999999765 3589999999876
Q ss_pred Cc-----ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc--cccccccCCCCCC
Q 047682 906 KQ-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN--PLRQSLVGLPGVS 977 (1425)
Q Consensus 906 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~g~~~~~ 977 (1425)
.. ...++.+||++|++. .+...||+|++.|..... +.+.++.++.++++++.+||. +..+.. +.
T Consensus 72 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~ 143 (287)
T PRK13637 72 TDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PF 143 (287)
T ss_pred CCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cc
Confidence 43 134567999999863 334579999998865432 344555666789999999996 555554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |
T Consensus 144 ~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G 221 (287)
T PRK13637 144 ELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-G 221 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999986 57788999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13637 222 KCELQGTP 229 (287)
T ss_pred EEEEECCH
Confidence 88889875
No 160
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-36 Score=339.20 Aligned_cols=213 Identities=28% Similarity=0.379 Sum_probs=178.1
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ +.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYG------------GGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeC------------CcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 4567776652 11469999999999999999999999999999999999765 347999999987532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc--ccccccCCCCCCcCCHH
Q 047682 908 ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP--LRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 908 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSgG 982 (1425)
...++.++|++|++.+++.+||+||+.+....+ ..+.+..++.+.++++.+++.+ ..+.. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 234567899999999999999999998865433 2233444566889999999985 55554 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999986 57788999999997 678888
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 161
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-36 Score=343.39 Aligned_cols=209 Identities=24% Similarity=0.360 Sum_probs=175.7
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccC
Q 047682 131 KKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQH 203 (1425)
Q Consensus 131 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 203 (1425)
.+.+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+... ++.++|++|+
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~ 110 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQS 110 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecC
Confidence 34567999999999999999999999999999999999999998 9999999998764321 2479999999
Q ss_pred CCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 204 DVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
+.+++.+||+||+.++....+.. . ......++++++.+||++..++
T Consensus 111 ~~~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~ 156 (269)
T cd03294 111 FALLPHRTVLENVAFGLEVQGVP----------R------------------------AEREERAAEALELVGLEGWEHK 156 (269)
T ss_pred cccCCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhC
Confidence 88888999999999865432110 0 0112245678899999877776
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
.++ .|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+. +|+.++|+.+++.+++|+
T Consensus 157 ~~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tiii~tH~~~~~~~~~d~ 230 (269)
T cd03294 157 YPD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQK-TIVFITHDLDEALRLGDR 230 (269)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhcCE
Confidence 664 59999999999999999999999999999999999999999999998754344 555578888889999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 047682 364 IILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~ 382 (1425)
+++|++|++++.|+++++.
T Consensus 231 v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 231 IAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 162
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-36 Score=355.94 Aligned_cols=206 Identities=28% Similarity=0.452 Sum_probs=169.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 211 (1425)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+.++.. .+++++||+|++.++ ..|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-ccc
Confidence 6899999999999999999999999999999999999998 999999999988776 468999999976655 569
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
+||||.++.. +.+.+++.+++... .+.+.+.-++..||.+|+.+ +
T Consensus 411 ireNi~l~~~-------------------------~~s~e~i~~al~~a---------~l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARP-------------------------DASDEEIIAALDQA---------GLLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCC-------------------------cCCHHHHHHHHHHh---------cHHHhhcCCCcccchhccCC-C
Confidence 9999999732 12222222222111 12223333567799999765 5
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
+|||||+|||++||||+.+++++++||||++||.+|+..|.+.|.++++ ++|+++ ++|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcC-hHHHhcCCEEEEecCCc
Confidence 7999999999999999999999999999999999999999999999876 466666 3443 45677899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999864
No 163
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-36 Score=345.70 Aligned_cols=218 Identities=24% Similarity=0.407 Sum_probs=177.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-----ccceEEEEccCCC-CC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDV-HI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 207 (1425)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999886532 2467999999853 45
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc--ccccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD--VCADTMV 285 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~v 285 (1425)
...||+||+.|+....+.. .++....++++++.+||+ +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccCC-
Confidence 5689999999864322110 011223467889999996 445544
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
++.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++.. +++|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEY-NMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 45699999999999999999999999999999999999999999999987643 4556667888889999999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhCCCCCCC
Q 047682 366 LISEGQIVFQGPREHVLE---FFKSMGFECPK 394 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~---~F~~~G~~~p~ 394 (1425)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 164
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-36 Score=343.57 Aligned_cols=203 Identities=25% Similarity=0.303 Sum_probs=172.9
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeecCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE---T----FARISGYCEQNDI 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 922 (1425)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 34579999999999999999999999999999999999765 3479999999875421 1 1356899999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEE
Q 047682 923 HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1002 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illL 1002 (1425)
+++.+||+||+.+....+ .......++.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999998865432 1233444566889999999988777764 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1003 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1003 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 57788999999986 678888875
No 165
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.9e-36 Score=382.49 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=196.1
Q ss_pred HhHHHHHHhhhhcccCHHHHHHHHHHHHhhcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhcccc
Q 047682 49 ERQRLIDKLVKVADVDNEQLLLKLKNRVDRVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILP 128 (1425)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (1425)
....-.||+.++.++.++ ..+.... ...+..+++|+|+++.++.
T Consensus 297 ~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~----------------------------- 340 (567)
T COG1132 297 RASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG----------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC-----------------------------
Confidence 345555666666665443 1111111 2334567999999988632
Q ss_pred CccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCC
Q 047682 129 SRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDV 205 (1425)
Q Consensus 129 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 205 (1425)
++++|+|+|++++|||.+||+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.
T Consensus 341 ----~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~ 413 (567)
T COG1132 341 ----KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPL 413 (567)
T ss_pred ----CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccce
Confidence 345999999999999999999999999999999999999998 9999999999987764 588999999666
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+|. .||+|||.++.. +.+.|++.+++...+ ....++ .|+++.||.|
T Consensus 414 LF~-~TI~~NI~~g~~-------------------------~at~eei~~a~k~a~------~~d~I~--~lp~g~dt~v 459 (567)
T COG1132 414 LFS-GTIRENIALGRP-------------------------DATDEEIEEALKLAN------AHEFIA--NLPDGYDTIV 459 (567)
T ss_pred eec-ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhC------hHHHHH--hCccccccee
Confidence 555 899999999732 222233334332221 112222 3577899999
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
|+++. .||||||||++||||++.+|++++||||||+||+.++..|.+.++++.+ ++|+++ +.|..+.+ ..+|+|+
T Consensus 460 ge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti-~~aD~Ii 534 (567)
T COG1132 460 GERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTI-KNADRII 534 (567)
T ss_pred cCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHH-HhCCEEE
Confidence 97665 5999999999999999999999999999999999999999999997753 467777 56665444 4599999
Q ss_pred EEcCCeEEEecChhHHHH
Q 047682 366 LISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~~ 383 (1425)
+|++|++++.|++++++.
T Consensus 535 Vl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 535 VLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEECCEEEEecCHHHHHH
Confidence 999999999999999975
No 166
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-36 Score=338.75 Aligned_cols=212 Identities=26% Similarity=0.353 Sum_probs=178.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56778776652 2469999999999999999999999999999999999765 34799999998764
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 907 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
. ..+.+||++|+..+++.+||.||+.+....+ .....+.++.++++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 2345799999998889999999998764432 223344456688999999998776654 35799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeC-CcEEEEECCC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGYEIYVGPL 1064 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~-Gg~~~y~G~~ 1064 (1425)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999997 57889999999985 5788887764
No 167
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.9e-36 Score=335.14 Aligned_cols=199 Identities=29% Similarity=0.441 Sum_probs=167.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc---c-ccceEEEeecCCCCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE---T-FARISGYCEQNDIHSPNV 927 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 927 (1425)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999865 3479999999875431 1 245689999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 047682 928 TVYESLLYSAWLRLPPDVDSETRRMFLEEIMELV-ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1425)
Q Consensus 928 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPT 1006 (1425)
|++||+.+....+. ..+.++.+.++++.+ ++.+..+.. +..||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334567778887 466655554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1007 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999986 57788999999986 688888875
No 168
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.9e-36 Score=333.55 Aligned_cols=194 Identities=22% Similarity=0.354 Sum_probs=163.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHIG 208 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 208 (1425)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 5999999999999999999999999999999999999998 999999999875432 2357999999988899
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
.+||+||+.++.+..+.. . .+....++++++.+||++..++.++
T Consensus 94 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 137 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVP----------P------------------------RDANERVSAALEKVGLEGKAHALPM-- 137 (216)
T ss_pred cccHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChh--
Confidence 999999999875432110 0 0112345678899999877666554
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.++||++++|+
T Consensus 138 ---~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 138 ---QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RG-TTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEe
Confidence 5999999999999999999999999999999999999999999999864 34 455557888889999999999999
Q ss_pred CCeE
Q 047682 369 EGQI 372 (1425)
Q Consensus 369 ~G~i 372 (1425)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9975
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4e-36 Score=340.61 Aligned_cols=218 Identities=25% Similarity=0.279 Sum_probs=177.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45677776552 12469999999999999999999999999999999999765 35799999998753
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 047682 907 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRL-----PPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG 975 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 975 (1425)
. ..+++.++|++|++.+++.+||+||+.+...... .........++.+.++++.++|.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1245679999999999999999999976421100 00111223345678899999998776665
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 57788999999997
Q ss_pred CcEEEEECCCC
Q 047682 1055 GGYEIYVGPLG 1065 (1425)
Q Consensus 1055 Gg~~~y~G~~~ 1065 (1425)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 6788888753
No 170
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-36 Score=342.79 Aligned_cols=214 Identities=27% Similarity=0.350 Sum_probs=179.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 77888887763 12359999999999999999999999999999999999765 34899999998764
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.+||++|++. .++..||.||+.|..... ..+..+.++.++++++.++|.+..+..+ ..||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHH
Confidence 3 233567999999863 445689999998764321 2344444566889999999988777663 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 47788999999986 6788999
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 85
No 171
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-36 Score=317.61 Aligned_cols=213 Identities=28% Similarity=0.403 Sum_probs=178.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++.+|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 5677777655 346899999999999999999999999999999999997653 4799999999865
Q ss_pred c----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCCCcCCH
Q 047682 907 Q----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELV-ELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lSg 981 (1425)
. +..++.++||||....||.+||+|||..++..+.. ++..+..++++.+.+ .|.+.++.+.| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 4 23466799999999999999999999987654421 112222267777776 36666666654 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||-++|||||+++|++|+|||||.||-|.-.++|.++|+++.++ |.||+.+-++.. ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999966 779999988865 47789999999996 79999
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.||..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99964
No 172
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.3e-35 Score=340.61 Aligned_cols=215 Identities=20% Similarity=0.298 Sum_probs=180.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 378899887663 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ccc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcC
Q 047682 906 KQE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGL 979 (1425)
Q Consensus 906 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 979 (1425)
... ..++.++|++|+..+++.+||.||+.+...... ..+.+..++.+.++++.++|.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 421 134568999999988999999999987543211 123334445678899999998877765 3579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 980 SgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999986 688
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 898875
No 173
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-36 Score=330.62 Aligned_cols=208 Identities=33% Similarity=0.496 Sum_probs=173.9
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 4667776652 246999999999999 999999999999999999999765 358999999987543
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 908 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
...++.++|++|++.+++.+||.||+.+....+ ..+.++.++.++++++.++|.+..+.. +..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLK---GIPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHH
Confidence 234567899999999999999999998865443 122333445678999999998776665 3579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |+++..|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46778999999997 5766654
No 174
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.5e-36 Score=336.85 Aligned_cols=215 Identities=25% Similarity=0.366 Sum_probs=174.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999988 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++....+... .... . ... ...+....++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~---~---~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA---R---ARR-----------EEREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc---c---ccc-----------cHHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999998754321100 0000 0 000 00112234677899999987666554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++ .++ +|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGI-TVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCC-EEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999865 344 455578888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 175
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.4e-36 Score=331.00 Aligned_cols=200 Identities=30% Similarity=0.444 Sum_probs=168.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35999999999999999999999999999999999999998 9999999998754332 3579999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.++.+..+.. . .+....++.+++.+||++..+..++ .
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------K------------------------DEIDERVREVAELLQIEHLLDRKPK-----Q 130 (213)
T ss_pred HHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhCChh-----h
Confidence 99998864332110 0 0112345678899999877776654 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| ++.++|+..++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-vi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTT-TIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987644444 55567888899999999999999999
Q ss_pred EEec
Q 047682 373 VFQG 376 (1425)
Q Consensus 373 v~~G 376 (1425)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 176
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.5e-36 Score=335.49 Aligned_cols=205 Identities=22% Similarity=0.378 Sum_probs=172.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 45999999999999999999999999999999999999998 9999999998754332 2469999999989999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------K------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 99999998864321100 0 011224567889999987766655
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ . +++++.++|+..++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 45999999999999999999999999999999999999999999999865 3 44555578888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999987763
No 177
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=334.87 Aligned_cols=205 Identities=28% Similarity=0.392 Sum_probs=172.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHDVHIG 208 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 208 (1425)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999998 9999999998765321 357999999998888
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
.+|++||+.++....+.. . ......++..++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------K------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 999999998864322110 0 011223567889999987766554
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELG-LTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865434 455557788888999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 178
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=341.58 Aligned_cols=215 Identities=21% Similarity=0.343 Sum_probs=175.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCC-CCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHD-VHIGEM 210 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 210 (1425)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.+... ++.++|++|++ ..++..
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 5899999999999999999999999999999999999998 9999999998865332 35799999986 367788
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.|+.+..+.. ..+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIP----------------------------------HEEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 9999999864322110 0111234677899999987666555
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.| |+.++|+.+++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-ilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMT-VISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 4599999999999999999999999999999999999999999999987644444 44467777777 589999999999
Q ss_pred eEEEecChhHHHH---HHHhCCCCCC
Q 047682 371 QIVFQGPREHVLE---FFKSMGFECP 393 (1425)
Q Consensus 371 ~iv~~G~~~~~~~---~F~~~G~~~p 393 (1425)
+++..|+++++.+ .++..|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 217 QVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred EEEEECCHHHHHcChHHHHHcCCCCc
Confidence 9999999988753 2344455544
No 179
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=344.70 Aligned_cols=218 Identities=25% Similarity=0.300 Sum_probs=179.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889988874210 012459999999999999999999999999999999999765 34799999998763
Q ss_pred c-------ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 047682 907 Q-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 977 (1425)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++.++.++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999862 233579999999875422 234445556789999999996 555654 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+||+++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999987 57889999999986 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 88999975
No 180
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7e-36 Score=347.85 Aligned_cols=205 Identities=27% Similarity=0.397 Sum_probs=176.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.++..+... .+...+++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765432100 0112346778999999988876664
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+++|++++|||||+|||+.++..+++.|+++.. + ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999843 4 556667899999999999999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 181
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9e-36 Score=330.84 Aligned_cols=205 Identities=24% Similarity=0.349 Sum_probs=172.4
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4667776652 2469999999999999999999999999999999999765 347999999987531
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 908 -----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 908 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
..+++.++|++|++.+++.+|++||+.+..... ...+.++.++.++++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV--KGMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 234567999999999999999999998764211 1223344456678999999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877999999999986 577889999999974
No 182
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-36 Score=319.46 Aligned_cols=207 Identities=28% Similarity=0.383 Sum_probs=180.2
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeecCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE----TFARISGYCEQNDIHSP 925 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 925 (1425)
+...+++|||+++++||++||+||||||||||+|+|+|..++ ..|+|.++|.++... ..+..++--+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 356799999999999999999999999999999999998763 589999999986532 23456788999999999
Q ss_pred CCCHHHHHHHHhhcc--------CCCC-CCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhC
Q 047682 926 NVTVYESLLYSAWLR--------LPPD-VDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 996 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr--------~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~ 996 (1425)
++||.||+..++..+ .+.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||+++
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 999999999875533 1111 1345556778999999999999999865 6999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 997 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 997 p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|++|+||||.+||.+..+..+.+.|+++.+. |.||+++-|+.+. ++.+||||++|+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 6999999999984 9999999999996 7889999874
No 183
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=338.77 Aligned_cols=203 Identities=24% Similarity=0.299 Sum_probs=170.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCC-CCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDV-HIGEM 210 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 210 (1425)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999998 9999999998765432 357999999852 56678
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.|+....+.. ..+....++.+++.+||.+..++.+.
T Consensus 96 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~---- 137 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPPY---- 137 (274)
T ss_pred cHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCChh----
Confidence 9999999864321110 00112346778999999877766554
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.++||+|++|++|
T Consensus 138 -~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 138 -HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-QG-KTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999865 34 45555788888899999999999999
Q ss_pred eEEEecChhHH
Q 047682 371 QIVFQGPREHV 381 (1425)
Q Consensus 371 ~iv~~G~~~~~ 381 (1425)
+++++|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 184
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=335.73 Aligned_cols=214 Identities=28% Similarity=0.383 Sum_probs=180.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887652 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.++|++|++.+++.+||.||+.+...++. ..+.++.+..++++++.+++.+..+.. .+.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1234579999999998999999999987643321 223334456688999999998766554 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 58889999999986 6788888
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 185
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=331.15 Aligned_cols=200 Identities=29% Similarity=0.396 Sum_probs=168.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999988 9999999988753 246799999998888889999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||+.++....+.. . ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVP----------K------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 9999865432110 0 001224567889999987666555 459
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc--CCe
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS--EGQ 371 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 371 (1425)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+. +|+.++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGK-TVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCC-EEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999998654344 45557888888999999999999 799
Q ss_pred EEEecCh
Q 047682 372 IVFQGPR 378 (1425)
Q Consensus 372 iv~~G~~ 378 (1425)
+++.++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 186
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=344.66 Aligned_cols=218 Identities=24% Similarity=0.316 Sum_probs=179.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67889988874110 0113599999999999999999999999999999999997653 4799999876531
Q ss_pred ---------------------------cccccceEEEeecCC-CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q 047682 907 ---------------------------QETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIM 958 (1425)
Q Consensus 907 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l 958 (1425)
....++.+|||+|++ ..+...||+|++.|..... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999998865432 344555667789999
Q ss_pred HHcCCc-cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 047682 959 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1037 (1425)
Q Consensus 959 ~~l~l~-~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1037 (1425)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566655 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1038 PSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1038 ~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+. ++.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 57889999999987 688999986
No 187
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-35 Score=332.98 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=171.7
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. .....+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5677887766310 011369999999999999999999999999999999999765 35799999998754
Q ss_pred c------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 047682 907 Q------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 977 (1425)
. ..+++.++|++|++ .+.+.+||+||+.+......+ ....+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 466789999999876543321 111112222235788999985 455554 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999986 56778999999996 5
Q ss_pred EEEEEC
Q 047682 1057 YEIYVG 1062 (1425)
Q Consensus 1057 ~~~y~G 1062 (1425)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 766554
No 188
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=353.16 Aligned_cols=207 Identities=22% Similarity=0.328 Sum_probs=176.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCCC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHDV 205 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 205 (1425)
...+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++||+|+..
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999998 9999999998865432 247999999999
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+++.+||+||+.++.+..+... .+....++++++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998765332100 011224567899999987766554
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..++ +|+.++|+.+++.+++|+|+
T Consensus 163 -----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~-TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 -----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQR-TIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCC-eEEEEECCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998654444 45557888999999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988774
No 189
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-36 Score=308.06 Aligned_cols=207 Identities=29% Similarity=0.460 Sum_probs=175.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc---ceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ---RTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 210 (1425)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||++++.+.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999887653 5678999998888888
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+|-+.++..-.+.+.. | .+....++..|...++.+.+.+ ..
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~R-----~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAGR-----DY 133 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhcc-----ch
Confidence 999999998643322110 0 0123346677888888877654 34
Q ss_pred ccCChhhhhhHHHHHHHhc------CCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 291 RGISGGQRKRVTTGEMLVG------PALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~------~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+.|||||||||-+||.|+. ++++||||||||.||......+++..|++++. +..|+.+.|+..-...+||+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhee
Confidence 5799999999999999974 44599999999999999999999999999984 355666789999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999886
No 190
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=336.96 Aligned_cols=214 Identities=21% Similarity=0.266 Sum_probs=180.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 378889887763 2469999999999999999999999999999999999765 3479999999765
Q ss_pred Cc----------------ccccceEEEeecCCCCCCCCCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCcccc-
Q 047682 906 KQ----------------ETFARISGYCEQNDIHSPNVTVYESLLYSAW-LRLPPDVDSETRRMFLEEIMELVELNPLR- 967 (1425)
Q Consensus 906 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~- 967 (1425)
.. ..+++.++|++|++.+++.+||+||+.+... .. .....+.++.+.++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1335679999999999999999999987542 21 123444556788999999997653
Q ss_pred ccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcC
Q 047682 968 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1047 (1425)
Q Consensus 968 ~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD 1047 (1425)
+.. ...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 443 4579999999999999999999999999999999999999999999999877999999999986 5777899
Q ss_pred EEEEEeCCcEEEEECCC
Q 047682 1048 ELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1048 ~v~~l~~Gg~~~y~G~~ 1064 (1425)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999997 678888875
No 191
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.7e-35 Score=330.47 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=173.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ .++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56778877662 12469999999999999999999999999999999999765 35899999998653
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
.. .+++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 13567899999998889999999998865433 223344445678899999998766655 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~G 213 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSDG 213 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999877899999999986 577789999999974
No 192
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=343.97 Aligned_cols=204 Identities=23% Similarity=0.337 Sum_probs=169.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCC------------------------
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDE------------------------ 190 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------------------------ 190 (1425)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 21 ~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 21 KALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred cceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceeccccccccccccccccccccccccccc
Confidence 5899999999999999999999999999999999999998 9999999876421
Q ss_pred ---CCccceEEEEccCC-CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhH
Q 047682 191 ---FVPQRTAAYISQHD-VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASV 266 (1425)
Q Consensus 191 ---~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1425)
...++.++||+|++ ..++..||+||+.|+....+.. ..+...
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~ 143 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAKK 143 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHHH
Confidence 01246799999984 4556789999999875432210 011223
Q ss_pred HHHHHHHHhCCc-ccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCE
Q 047682 267 VTDYVIKVLGLD-VCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGT 345 (1425)
Q Consensus 267 ~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t 345 (1425)
+++++++.+||+ +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . ++
T Consensus 144 ~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~ 216 (305)
T PRK13651 144 RAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-GK 216 (305)
T ss_pred HHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CC
Confidence 467789999996 455544 456999999999999999999999999999999999999999999999864 3 44
Q ss_pred EEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHH
Q 047682 346 AVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 346 ~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
+|+.++|+.+++.+.||+|++|++|+++++|+++++.
T Consensus 217 tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 5666789999999999999999999999999998875
No 193
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.6e-36 Score=331.30 Aligned_cols=199 Identities=26% Similarity=0.416 Sum_probs=164.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCC--CCCCH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHS--PNVTV 929 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 929 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999765 34799999997653 2456789999998663 34899
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 047682 930 YESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1008 (1425)
Q Consensus 930 ~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsg 1008 (1425)
+||+.+....+.. .....+..++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345688999999998776665 347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 1009 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 1009 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999986 57788999999985 4 46654
No 194
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=344.88 Aligned_cols=217 Identities=19% Similarity=0.373 Sum_probs=174.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-------------------Ccc
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-------------------VPQ 194 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 194 (1425)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|+++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999998 99999999887542 124
Q ss_pred ceEEEEccCC-CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHH
Q 047682 195 RTAAYISQHD-VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIK 273 (1425)
Q Consensus 195 ~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 273 (1425)
+.++||+|++ ..+...||+||+.|+....+.. ..+...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 6799999985 2344569999999864321100 0011234567889
Q ss_pred HhCCc-ccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEec
Q 047682 274 VLGLD-VCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQ 352 (1425)
Q Consensus 274 ~lgL~-~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q 352 (1425)
.+||+ ...++ .+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|
T Consensus 162 ~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 34443 3456999999999999999999999999999999999999999999998864 3 445556788
Q ss_pred ChhhHHhhcCeEEEEcCCeEEEecChhHHHH---HHHhCCCCCCC
Q 047682 353 PAPETYDLFDDIILISEGQIVFQGPREHVLE---FFKSMGFECPK 394 (1425)
Q Consensus 353 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~---~F~~~G~~~p~ 394 (1425)
+.+++.+.||+|++|++|++++.|+++++.+ .++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888999999999999999999999988742 34445555544
No 195
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=346.03 Aligned_cols=218 Identities=23% Similarity=0.333 Sum_probs=179.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 48999999887421 0012359999999999999999999999999999999999865 3479999999765
Q ss_pred Cc-------------------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc
Q 047682 906 KQ-------------------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN 964 (1425)
Q Consensus 906 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 964 (1425)
.. ...++.+|||+|++ .+++ .||+||+.|..... +.+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3554 59999998864321 234444556788999999996
Q ss_pred -cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 047682 965 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1043 (1425)
Q Consensus 965 -~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1043 (1425)
+..+.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 4579999999999999999999999999999999999999999999999877999999999986 477
Q ss_pred HhcCEEEEEeCCcEEEEECCC
Q 047682 1044 EAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1044 ~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999997 688999985
No 196
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.3e-35 Score=332.59 Aligned_cols=212 Identities=27% Similarity=0.404 Sum_probs=176.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45677777652 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 907 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
. ....+.++|++|++.+++.+|++||+.+.+..+ ....+...+.++++++.+||.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122356899999998888999999998765432 2233344556788999999987766653 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 35 45999999987 67788887
Q ss_pred C
Q 047682 1064 L 1064 (1425)
Q Consensus 1064 ~ 1064 (1425)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 197
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.8e-35 Score=352.41 Aligned_cols=209 Identities=26% Similarity=0.433 Sum_probs=176.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|+++.+... ++.++||+|+..+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999998 9999999998876432 46799999998888999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.++..-.. .++.. . ..+...+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~--~~~~~---~-------------------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR--SRFDT---W-------------------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc--ccccC---C-------------------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998642110 00000 0 0011335678999999988777655
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.|||||||||.|||||+++|++|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 45999999999999999999999999999999999999999999999975 34 45666789999999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998864
No 198
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=342.59 Aligned_cols=218 Identities=25% Similarity=0.333 Sum_probs=180.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5788888887410 0011359999999999999999999999999999999999765 35899999998753
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 047682 907 Q-------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGV 976 (1425)
Q Consensus 907 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 976 (1425)
. ...++.+||++|++ .++ ..||.|++.|..... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23456799999986 344 469999999875432 234555667789999999996 455544 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|+|++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999996 6
Q ss_pred EEEEECCCC
Q 047682 1057 YEIYVGPLG 1065 (1425)
Q Consensus 1057 ~~~y~G~~~ 1065 (1425)
++++.|+..
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 889999863
No 199
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.1e-36 Score=330.23 Aligned_cols=193 Identities=26% Similarity=0.383 Sum_probs=163.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCC-CCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDI-HSPNV 927 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 927 (1425)
+.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999765 357999999986532 234567899999974 36678
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 047682 928 TVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1425)
Q Consensus 928 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTs 1007 (1425)
|++||+.+....+ .......++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765322 123333445678899999998766665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 1008 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999875
No 200
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.4e-35 Score=334.71 Aligned_cols=214 Identities=24% Similarity=0.305 Sum_probs=177.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcCc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISGY 903 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g~ 903 (1425)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788877663 235999999999999999999999999999999999976431 12799999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCCC
Q 047682 904 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN----PLRQSLVGLP 974 (1425)
Q Consensus 904 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~~ 974 (1425)
+... ...++.++|++|+..+++ .|++||+.+....+. ..+..+.++.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7542 234567999999998888 999999988654331 123344456688999999997 444443
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999876 589999999986 57788999999997
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 678888875
No 201
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.4e-35 Score=337.16 Aligned_cols=207 Identities=20% Similarity=0.349 Sum_probs=172.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+..++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999998 999999999876432 135699999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||.||+.++...... + .. ......++.+++.+||++..++.++
T Consensus 97 ~~~tv~enl~~~~~~~~~---~------~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---L------PA------------------------PLLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHccC---C------CH------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 899999999885321100 0 00 0012235667899999887776554
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|+|++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALG-VTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhhCEEEEE
Confidence 5999999999999999999999999999999999999999999999865434 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 202
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=341.24 Aligned_cols=216 Identities=26% Similarity=0.382 Sum_probs=181.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 478999988773 12469999999999999999999999999999999999765 3589999999875
Q ss_pred Cc-----ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcC
Q 047682 906 KQ-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGL 979 (1425)
Q Consensus 906 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 979 (1425)
.. ..+++.+||++|++. .+...||+||+.+..... +.+.++.++.++++++.++|.+..+.. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 234567999999874 234679999998764322 234444556789999999998877765 4579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 980 SgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
|||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999986 46778999999997 688
Q ss_pred EEECCCC
Q 047682 1059 IYVGPLG 1065 (1425)
Q Consensus 1059 ~y~G~~~ 1065 (1425)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 203
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=335.78 Aligned_cols=206 Identities=22% Similarity=0.259 Sum_probs=175.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999988763 2469999999999999999999999999999999999765 3479999998764
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 245678999999998898999999987421 1 1234578899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 57788999999997 678887764
No 204
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.01 Aligned_cols=218 Identities=20% Similarity=0.313 Sum_probs=179.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|..+ +..|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKG--------TPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCC--------CccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37788988887411 0012459999999999999999999999999999999999765 3479999999875
Q ss_pred Cc-------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCC
Q 047682 906 KQ-------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPG 975 (1425)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 975 (1425)
.. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++.++.++++++.+||. +..+..
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13466799999986 3444 59999998865322 234455566788999999996 566654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999975 4899999999986 57789999999996
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 688899875
No 205
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.9e-35 Score=349.34 Aligned_cols=209 Identities=24% Similarity=0.311 Sum_probs=176.8
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCc----cCCCCCc-------cceEEE
Q 047682 131 KKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGH----NMDEFVP-------QRTAAY 199 (1425)
Q Consensus 131 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~y 199 (1425)
.+...+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++..... ++.++|
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~ 110 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSM 110 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEE
Confidence 34567999999999999999999999999999999999999998 999999996 3333211 247999
Q ss_pred EccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc
Q 047682 200 ISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV 279 (1425)
Q Consensus 200 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 279 (1425)
|+|+..+++.+||+||+.++....+... .+....++++++.+||++
T Consensus 111 vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~ 156 (382)
T TIGR03415 111 VFQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQ 156 (382)
T ss_pred EECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCch
Confidence 9999999999999999999754332110 011234677899999988
Q ss_pred cccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHh
Q 047682 280 CADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYD 359 (1425)
Q Consensus 280 ~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~ 359 (1425)
..|..++ .|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+ ++|+.++|+.+++.+
T Consensus 157 ~~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~~ 230 (382)
T TIGR03415 157 WADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEALK 230 (382)
T ss_pred hhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHH
Confidence 7776554 5999999999999999999999999999999999999999999999876444 455557899999999
Q ss_pred hcCeEEEEcCCeEEEecChhHHH
Q 047682 360 LFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 360 ~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
++|+|++|++|+++..|+++++.
T Consensus 231 l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 231 IGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred hCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999998875
No 206
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-35 Score=331.46 Aligned_cols=203 Identities=28% Similarity=0.422 Sum_probs=171.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999998 999999999875421 2457999999988888999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+..+..+... .+....++++++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999998654322100 0012235678899999877776654
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999854 4 455657888888889999999999999
Q ss_pred EEEecChhHH
Q 047682 372 IVFQGPREHV 381 (1425)
Q Consensus 372 iv~~G~~~~~ 381 (1425)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 207
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.6e-35 Score=331.05 Aligned_cols=203 Identities=24% Similarity=0.405 Sum_probs=168.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999998 9999999988765432 3569999999889999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVL-GLDVCADTMVGDE 288 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~ 288 (1425)
+||+||+.++....+ . . +....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R----------A------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c----------h------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999998643211 0 0 0011234456666 4665555544
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ . +++++.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 45999999999999999999999999999999999999999999999865 3 4555557888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987763
No 208
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=334.68 Aligned_cols=214 Identities=27% Similarity=0.370 Sum_probs=172.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999988 999999999876543 135799999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++..... ....... +. . .......++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~~~~---------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWRSLF---------GL-F--------------PKEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhhhhc---------cc-C--------------cHHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987532110 0000000 00 0 0011234567889999987666544
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGI-TVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998754344 4555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 209
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-36 Score=324.99 Aligned_cols=223 Identities=25% Similarity=0.362 Sum_probs=195.8
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHD 204 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 204 (1425)
+...-++|+|++|+.||+..|+|-||||||||+++|.++.+|+ +|+|.++|.++..... ++++++|+|+.
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 3455789999999999999999999999999999999999999 9999999998876543 36799999999
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.++|..||.||..|+.+.+|.+. ++.+.+..+.|+..||+..++..
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPK----------------------------------AEREERALEALELVGLEGYADKY 161 (386)
T ss_pred ccccchhHhhhhhcceeecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhhcC
Confidence 99999999999999999887642 12344567889999999988765
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ ++||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++.+.+++|+|. ++|+.+|.+++.|||
T Consensus 162 p-----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvF-itHDLdEAlriG~rI 235 (386)
T COG4175 162 P-----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVF-ITHDLDEALRIGDRI 235 (386)
T ss_pred c-----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEE-EecCHHHHHhccceE
Confidence 5 5699999999999999999999999999999999999999999999998877666555 899999999999999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhCCCCCCCCCCHHHHHHhh
Q 047682 365 ILISEGQIVFQGPREHVLEFFKSMGFECPKRKGVADFLQEV 405 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~ad~l~~v 405 (1425)
.+|.+|+||..|+++|++. .|.+.-+++|...+
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999974 46666667776654
No 210
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=329.46 Aligned_cols=201 Identities=22% Similarity=0.312 Sum_probs=166.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 206 (1425)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999988 9999999998865432 2569999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++.+||+||+.+.....+.. . .+.+.+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------P------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 88999999999864321100 0 011234567899999987666554
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHh-hCEEEE
Confidence 45999999999999999999999999999999999999999999999865434 445556777777665 589999
Q ss_pred EcCCeEEEecCh
Q 047682 367 ISEGQIVFQGPR 378 (1425)
Q Consensus 367 L~~G~iv~~G~~ 378 (1425)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 211
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=328.97 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=167.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999998 9999999987754 2356799999998888899999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||+.+..+..+... .+....++++++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988644321100 011224567889999987776654 459
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEE
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIV 373 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 373 (1425)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-AG-KTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999865 34 45565788888899999999999999998
Q ss_pred Eec
Q 047682 374 FQG 376 (1425)
Q Consensus 374 ~~G 376 (1425)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 212
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.5e-35 Score=328.23 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=170.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYE 931 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 931 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999765 35899999998754322 256899999998899999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 047682 932 SLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1011 (1425)
Q Consensus 932 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~ 1011 (1425)
|+.+....+. .+ ++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 13467889999998877665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1012 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1012 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|++.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999877999999999986 57789999999986 6888999864
No 213
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=333.16 Aligned_cols=212 Identities=21% Similarity=0.325 Sum_probs=176.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 378889887663 2469999999999999999999999999999999999765 3579999999875
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCCCcCC
Q 047682 906 KQE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELV-ELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 906 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lS 980 (1425)
... ..++.++|++|+..+++.+||.||+.+..... ..+..++.++++++.+ ++.+..+.. ...||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 23567999999999999999999998754221 1122334467777777 466555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 58899999999997 68899
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 214
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=333.83 Aligned_cols=206 Identities=26% Similarity=0.418 Sum_probs=171.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999998 9999999998764332 35799999999899999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc--cccccccCc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV--CADTMVGDE 288 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~ 288 (1425)
||+||+.++.+..+.. . .+....++++++.+||+. ..++.
T Consensus 91 tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~l~~~~~~~~~---- 132 (242)
T cd03295 91 TVEENIALVPKLLKWP----------K------------------------EKIRERADELLALVGLDPAEFADRY---- 132 (242)
T ss_pred cHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcHHHHhcC----
Confidence 9999999864322110 0 011224567889999985 44444
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.+++|+|++|+
T Consensus 133 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 133 -PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 456999999999999999999999999999999999999999999999876434 455557788888999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 215
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=332.81 Aligned_cols=214 Identities=24% Similarity=0.321 Sum_probs=179.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEec
Confidence 367888887763 2469999999999999999999999999999999999765 3579999999864
Q ss_pred C---------cccccceEEEeecCCCCCCCCCHHHHHHHH-hhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 047682 906 K---------QETFARISGYCEQNDIHSPNVTVYESLLYS-AWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG 975 (1425)
Q Consensus 906 ~---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~-~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 975 (1425)
. ....++.++|++|++.+++.+|+.||+.+. .... .....+..+.+.++++.+|+.+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 138 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF----- 138 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----
Confidence 2 012345789999999999999999999643 2221 122333455688999999998777765
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 139 ~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 139 PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999986 57788999999996
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 688898875
No 216
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-36 Score=362.10 Aligned_cols=215 Identities=27% Similarity=0.418 Sum_probs=181.7
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++|+||++.|+.. ++.++|+|+||+|+|||.+||+||||+||||+.++|-+... +.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 479999999999753 45689999999999999999999999999999999998765 458999999999
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHH-----HHHHHHcCCccccccccCCCCC
Q 047682 905 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFL-----EEIMELVELNPLRQSLVGLPGV 976 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v-----~~~l~~l~l~~~~~~~~g~~~~ 976 (1425)
+++ ..+++.+|+|.|+|.+|. -||+||+.|+.. +.+.++..... .+.+ .++.+-.|+.||..|.
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKGS 603 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCccc
Confidence 765 456789999999999986 499999999753 34444432221 2222 2556678899997654
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++|||||++||+||+|||+||.||+++...|.++|.++.+ ++|||++.|+.| ..+.+|+|+++++ |
T Consensus 604 -qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 604 -QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred -cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 6999999999999999999999999999999999999999999988875 699999999985 6788999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
+++..|.-
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 88998853
No 217
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=340.50 Aligned_cols=216 Identities=23% Similarity=0.316 Sum_probs=181.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++. ...+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKE----------DQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCC----------CCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788899887741 012359999999999999999999999999999999999765 3589999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 234567999999973 677889999998865322 2345555667899999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 35 67999999986 68888
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 218
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-35 Score=328.84 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=171.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.. ...+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4677887766310 112469999999999999999999999999999999999765 35899999998753
Q ss_pred cc---c---cc-ceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcC
Q 047682 907 QE---T---FA-RISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGL 979 (1425)
Q Consensus 907 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 979 (1425)
.. . ++ +.++|++|++.+++.+|++||+.+....+ .....+..+.+.++++.+++.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIG---KKSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 21 1 22 56899999998888999999998865433 122333345678899999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 980 SgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++| ++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~G-~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKDG-QL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeCC-Ee
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 557999999974 54
No 219
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-36 Score=307.38 Aligned_cols=214 Identities=28% Similarity=0.415 Sum_probs=181.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++.+|++|+.. .+.+|++||++++|||++||+|||||||||||+.|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 56688888763 45799999999999999999999999999999999997653 4799999999865
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCC--CHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDV--DSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~--~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
. ....+..+.++|+..+....||+|-+.++. .|... ..++..+..+++|...++.+++... ...|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr---~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGR---IPHRSGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcc---cccccCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCc
Confidence 4 344567799999998877789999999874 33322 2224455688999999999988765 357999
Q ss_pred HHHHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 982 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 982 GqrqRl~ia~~L~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||||.+||.|+. ++++||||||||.||..-+..++++.|+++++|..|+|+.||.+. ...++|||++|++
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~- 216 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ- 216 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-
Confidence 99999999999975 456999999999999999999999999999999999999999985 6788999999996
Q ss_pred cEEEEECCCC
Q 047682 1056 GYEIYVGPLG 1065 (1425)
Q Consensus 1056 g~~~y~G~~~ 1065 (1425)
|+++..|++.
T Consensus 217 Grv~a~g~p~ 226 (259)
T COG4559 217 GRVIASGSPQ 226 (259)
T ss_pred CeEeecCCHH
Confidence 7999999874
No 220
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=335.43 Aligned_cols=218 Identities=22% Similarity=0.266 Sum_probs=179.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377888887662 2469999999999999999999999999999999999765 3589999999875
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHHhhccCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 047682 906 KQE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLP----------P--DVDSETRRMFLEEIMELVELNPLRQS 969 (1425)
Q Consensus 906 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~ 969 (1425)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999886431110 0 00112233567888999999877666
Q ss_pred ccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCE
Q 047682 970 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1048 (1425)
Q Consensus 970 ~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~ 1048 (1425)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999875 899999999986 57788999
Q ss_pred EEEEeCCcEEEEECCCC
Q 047682 1049 LFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1049 v~~l~~Gg~~~y~G~~~ 1065 (1425)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999996 6788888863
No 221
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=338.95 Aligned_cols=213 Identities=23% Similarity=0.319 Sum_probs=178.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ +++.+|+|||++|++||++||+|||||||||||++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56778777652 12359999999999999999999999999999999999765 35899999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 Q----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
. ...++.+||++|++. .+...|+.||+.+..... ..+..+.++.++++++.++|.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCH
Confidence 2 234567999999975 366789999998765322 234444556788999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 67999999997 678899
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 986
No 222
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.3e-35 Score=331.35 Aligned_cols=205 Identities=20% Similarity=0.328 Sum_probs=171.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-----ccceEEEEccCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDVHIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 208 (1425)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999998 999999999876421 2457999999988888
Q ss_pred CCCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 209 EMTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
.+||+||+.++... .+. .. .+....++++++.+||+...+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGA----------SK------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999885321 110 00 011224567889999987666554
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+ .+ ++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999864 34 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 223
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.3e-35 Score=334.61 Aligned_cols=213 Identities=23% Similarity=0.309 Sum_probs=178.5
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877663 2469999999999999999999999999999999999765 358999999986531
Q ss_pred ----------------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 047682 908 ----------------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLV 971 (1425)
Q Consensus 908 ----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 971 (1425)
...++.++|++|++.+++..|+.||+.+..... ........++.++++++.+++.+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 123567999999999999999999998753211 1223444456688999999998776654
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEE
Q 047682 972 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1050 (1425)
Q Consensus 972 g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~ 1050 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|+++
T Consensus 144 ----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T TIGR03005 144 ----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVC 218 (252)
T ss_pred ----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999986 5778899999
Q ss_pred EEeCCcEEEEECCC
Q 047682 1051 LMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1051 ~l~~Gg~~~y~G~~ 1064 (1425)
+|++ |++++.|+.
T Consensus 219 ~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 219 FFDK-GRIVEQGKP 231 (252)
T ss_pred EEEC-CEEEEeCCH
Confidence 9997 678888875
No 224
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.2e-35 Score=333.20 Aligned_cols=204 Identities=22% Similarity=0.339 Sum_probs=168.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCcccEEEECCccCCCCC-----ccceEEEEccC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKL-----DPSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQH 203 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 203 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 35999999999999999999999999999999999999 777 999999999875432 24679999998
Q ss_pred CCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 204 DVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
+.++ .+||+||+.++.+..+... . .+....++++++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL----------K-----------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc----------H-----------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8777 8999999998654321000 0 0012345678899999876555
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
.+. ++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 430 356999999999999999999999999999999999999999999999865 3 5566678888899999999
Q ss_pred EEEEcCCeEEEecChhH
Q 047682 364 IILISEGQIVFQGPREH 380 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~ 380 (1425)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 225
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=332.89 Aligned_cols=216 Identities=24% Similarity=0.279 Sum_probs=177.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcCc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISGY 903 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g~ 903 (1425)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887663 246999999999999999999999999999999999975421 35899999998
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc----cccccCCCCC
Q 047682 904 PKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL----RQSLVGLPGV 976 (1425)
Q Consensus 904 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g~~~~ 976 (1425)
+... ..+++.+||++|++.+++.+||.||+.+....+.. .....+.++.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7532 23456799999999888999999999886543211 11233445568899999998642 3333 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999864 899999999986 57788999999986 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 78888875
No 226
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-35 Score=334.13 Aligned_cols=214 Identities=25% Similarity=0.288 Sum_probs=176.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899887652 24699999999999999999999999999999999997542 12589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ..+++.++|++|++.+++ +|++||+.+....+ ..+.+..++.++++++.+++.+ ..+..
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 134567999999988887 89999998865432 2233444456788999998842 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999986 5778899999998
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 6 688898875
No 227
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=340.15 Aligned_cols=219 Identities=24% Similarity=0.297 Sum_probs=179.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ....+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36788888776310 0012469999999999999999999999999999999999765 3589999999875
Q ss_pred Cc-------ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 047682 906 KQ-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGV 976 (1425)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 976 (1425)
.. ...++.+||++|++. .+..+||.||+.|....+ ....++.+++++++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----P 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----c
Confidence 32 123457999999962 233589999998765432 234445556789999999997 566665 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57889999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 78888875
No 228
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7e-36 Score=346.73 Aligned_cols=208 Identities=27% Similarity=0.412 Sum_probs=169.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++...+. ++.++.++| ..|++..
T Consensus 351 ~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q-r~hlF~~ 426 (573)
T COG4987 351 TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ-RVHLFSG 426 (573)
T ss_pred cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc-chHHHHH
Confidence 45999999999999999999999999999999999999999 9999999999877655 578999999 5777788
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|+|+||..+. |+.+.|+..+++..-+- +..+ .+.++..||.+|+.+.
T Consensus 427 Tlr~NL~lA~-------------------------~~AsDEel~~aL~qvgL------~~l~--~~~p~gl~t~lge~G~ 473 (573)
T COG4987 427 TLRDNLRLAN-------------------------PDASDEELWAALQQVGL------EKLL--ESAPDGLNTWLGEGGR 473 (573)
T ss_pred HHHHHHhhcC-------------------------CCCCHHHHHHHHHHcCH------HHHH--HhChhhhhchhccCCC
Confidence 9999999863 33333333332211110 1111 1234567899997654
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.||||||||++|||+|++++++++|||||.|||+.|+.++++.+.+.++ ++|+++ ++|+... .+.||+|++|++|
T Consensus 474 -~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kTll~-vTHrL~~-le~~drIivl~~G 548 (573)
T COG4987 474 -RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKTLLM-VTHRLRG-LERMDRIIVLDNG 548 (573)
T ss_pred -cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCeEEE-Eeccccc-HhhcCEEEEEECC
Confidence 5999999999999999999999999999999999999999999988654 566665 5666644 4789999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+++++|.+.++++
T Consensus 549 kiie~G~~~~Ll~ 561 (573)
T COG4987 549 KIIEEGTHAELLA 561 (573)
T ss_pred eeeecCCHHhhhc
Confidence 9999999999874
No 229
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.6e-35 Score=343.25 Aligned_cols=230 Identities=20% Similarity=0.237 Sum_probs=184.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478888887774321000000001235799999999999999999999999999999999997653 479999999876
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 047682 906 KQE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGV 976 (1425)
Q Consensus 906 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 976 (1425)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 421 2456799999997 57889999999988654321 1245556667788999999994 344444 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
..||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 899999999986 57788999999996
Q ss_pred cEEEEECCCC
Q 047682 1056 GYEIYVGPLG 1065 (1425)
Q Consensus 1056 g~~~y~G~~~ 1065 (1425)
|+++..|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 6889999863
No 230
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.6e-35 Score=332.02 Aligned_cols=218 Identities=23% Similarity=0.260 Sum_probs=174.8
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5677777652 246999999999999999999999999999999999973111458999999987542
Q ss_pred c---cc-cceEEEeecCCCCCCCCCHHHHHHHHhhccCCC----CCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCc
Q 047682 908 E---TF-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPP----DVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSG 978 (1425)
Q Consensus 908 ~---~~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~ 978 (1425)
. .. +..++|++|++.+++.+|++|++.+........ ..+.++..+.++++++.++|. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 12 234899999999999999999998764322110 112233345678899999997 35554422 24
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEeCCcE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGY 1057 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fD~v~~l~~Gg~ 1057 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877899999999986 46666 799999986 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 8888875
No 231
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=338.54 Aligned_cols=206 Identities=21% Similarity=0.309 Sum_probs=170.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCC-C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHD-V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 205 (1425)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 246799999985 2
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
.+...||+||+.|+....+.. . .+....++++++.+||. ...++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 334469999999864321110 0 01123466789999996 455544
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDE-NKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999986543 455666788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999988764
No 232
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.9e-35 Score=333.07 Aligned_cols=204 Identities=24% Similarity=0.367 Sum_probs=170.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-----------CccceEEEEccC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-----------VPQRTAAYISQH 203 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 203 (1425)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999999988 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 047682 204 DVHIGEMTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCAD 282 (1425)
Q Consensus 204 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 282 (1425)
+.+++.+||+||+.++... .+. . ..+....++.+++.+||+...|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE-P---------------------------------KEEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC-C---------------------------------HHHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999875321 110 0 0011234567888999987666
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
+.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+. +++.++|+.+++.+++|
T Consensus 140 ~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKR-TMVIVTHEMSFARDVAD 212 (250)
T ss_pred CCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCC-EEEEEeCCHHHHHHhcC
Confidence 544 46999999999999999999999999999999999999999999999864 344 45557888889999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 047682 363 DIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 363 ~vilL~~G~iv~~G~~~~~~ 382 (1425)
++++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 233
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=337.58 Aligned_cols=214 Identities=25% Similarity=0.370 Sum_probs=179.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ +++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67788887763 12359999999999999999999999999999999999765 35899999998754
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.+||++|++. .+...||.||+.+..... ..+.+..++.++++++.++|.+..+..+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999963 344679999998765322 2344455567889999999988777663 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999986 57789999999997 688899
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 986
No 234
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-33 Score=355.30 Aligned_cols=216 Identities=28% Similarity=0.423 Sum_probs=178.2
Q ss_pred cccCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEE
Q 047682 821 PFEPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKI 900 (1425)
Q Consensus 821 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i 900 (1425)
|.-...++|+|++|.++. ++..+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +..|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 333457999999999852 22369999999999999999999999999999999999876 45899999
Q ss_pred cCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-------cccccc
Q 047682 901 SGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-------PLRQSL 970 (1425)
Q Consensus 901 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~ 970 (1425)
||++..+ ...|+.+|||+||+.++. -|++||+.++. ++.+.++ +.++++..|.. .-.|+.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccc
Confidence 9998654 567899999999998875 59999998643 3333333 23333333332 234556
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEE
Q 047682 971 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1050 (1425)
Q Consensus 971 ~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~ 1050 (1425)
+|.. ..+||||||||++|||+|+++|+||+||||||+||+.+.+.|++.|+++. +|+|+|+++|+++ ..+.+|+++
T Consensus 603 v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 6644 46899999999999999999999999999999999999999999999986 4899999999985 678999999
Q ss_pred EEeCCcEEEEECCC
Q 047682 1051 LMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1051 ~l~~Gg~~~y~G~~ 1064 (1425)
+|++ |+++..|+.
T Consensus 679 Vl~~-Gkiv~~gs~ 691 (709)
T COG2274 679 VLDQ-GKIVEQGSH 691 (709)
T ss_pred EccC-CceeccCCH
Confidence 9986 799999986
No 235
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.6e-35 Score=380.38 Aligned_cols=205 Identities=27% Similarity=0.386 Sum_probs=166.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 35899999999999999999999999999999999999998 9999999999987654 57899999976665 56
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|++|||.++.. .+.+++.+++...+- ++.+ -.+++..||.+|+.+
T Consensus 542 TI~eNi~~~~~--------------------------~~~e~i~~al~~a~l------~~~i--~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP--------------------------LTLDEAWEAARMAGL------AEDI--RAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC--------------------------CCHHHHHHHHHHcCc------HHHH--HhccccccccccCCC-
Confidence 99999998632 111122222211110 1111 236778899999875
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.+||||||||++||||++++|++++||||||+||+.++.++.+.|+++ ++|+|+ ++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999875 456655 45544 566789999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 236
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.5e-35 Score=326.79 Aligned_cols=192 Identities=26% Similarity=0.334 Sum_probs=161.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCC-CCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDV-HIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 212 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 45999999999999999999999999999999999999998 9999999988754333467999999863 4557899
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.++....+ .....++++++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchhcCCCch-----h
Confidence 999987542110 001235678899999877776554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 34 4455578888889899999999999997
Q ss_pred E
Q 047682 373 V 373 (1425)
Q Consensus 373 v 373 (1425)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 237
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.2e-35 Score=334.52 Aligned_cols=213 Identities=25% Similarity=0.338 Sum_probs=171.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999998 999999998875432 245799999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++..... ..+...... ...+....++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWRSLLGR------------------------FSEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchhhhhcc------------------------ccHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532100 000000000 00011234567889999987666544
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++.++||++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDG-ITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 46999999999999999999999999999999999999999999999865434 45555788888899999999999
Q ss_pred cCCeEEEecChhHH
Q 047682 368 SEGQIVFQGPREHV 381 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~ 381 (1425)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988765
No 238
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=332.91 Aligned_cols=217 Identities=24% Similarity=0.261 Sum_probs=178.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 377888888763 246999999999999999999999999999999999976532 2489999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKK-----QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+.. ...+++.++|++|++.+++.+||.||+.+....+. .....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 12345679999999999999999999987654321 11123334456788999998853 22322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 7 688888875
No 239
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=333.07 Aligned_cols=215 Identities=22% Similarity=0.241 Sum_probs=175.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 478999988763 235999999999999999999999999999999999975431 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN----PLRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ +||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999988774 899999988654321 112333456678888988874 233433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 240
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-35 Score=329.65 Aligned_cols=195 Identities=25% Similarity=0.374 Sum_probs=162.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999998 999999999876543 13579999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++.+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------K------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 99999999999865432110 0 001224567899999987666555
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|+..++. .||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTT-IVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCe-EEEEECCHHHHh-hhcEEEE
Confidence 4599999999999999999999999999999999999999999999986533444 555677777775 9999999
Q ss_pred EcCCeE
Q 047682 367 ISEGQI 372 (1425)
Q Consensus 367 L~~G~i 372 (1425)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 241
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=334.06 Aligned_cols=214 Identities=25% Similarity=0.359 Sum_probs=178.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788887663 2469999999999999999999999999999999999765 35799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+++.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223457899999988888899999998754221 1122233456788999999987777653 5799999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 984 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 984 rqRl~ia~~L~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 66899999999986 57789999999996 6
Q ss_pred EEEEECCCC
Q 047682 1057 YEIYVGPLG 1065 (1425)
Q Consensus 1057 ~~~y~G~~~ 1065 (1425)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 788888753
No 242
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=336.16 Aligned_cols=216 Identities=25% Similarity=0.389 Sum_probs=175.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCC-CCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHD-VHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 209 (1425)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999998 9999999998865432 35799999986 36778
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
.||+||+.++.+..+.. ..+....++++++.+||++..++.++
T Consensus 97 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVGMEDFLNREPH--- 139 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCcc---
Confidence 89999999864322110 00112346778999999877776654
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++. .+|+|++|++
T Consensus 140 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 140 --RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 599999999999999999999999999999999999999999999987643 445555677777775 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhCCCCCC
Q 047682 370 GQIVFQGPREHVLE---FFKSMGFECP 393 (1425)
Q Consensus 370 G~iv~~G~~~~~~~---~F~~~G~~~p 393 (1425)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3334454443
No 243
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=336.59 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=171.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCC--C---CccceEEEEccCCC-CCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDE--F---VPQRTAAYISQHDV-HIG 208 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 208 (1425)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999999998 9999999998742 1 12367999999853 345
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
..||+||+.++....+.. . .+....++++++.+||.+..++.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhCCc---
Confidence 689999998864322110 0 011234677899999987766554
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++.++||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~-tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGL-TIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhCCEEEEEE
Confidence 459999999999999999999999999999999999999999999998764344 55557888889999999999999
Q ss_pred CCeEEEecChhHHHH
Q 047682 369 EGQIVFQGPREHVLE 383 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~ 383 (1425)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988753
No 244
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=337.61 Aligned_cols=214 Identities=26% Similarity=0.305 Sum_probs=180.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 788898887631 124599999999999999999999999999999999998653 4899999998764
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.+||++|++. .++..||.||+.+..... ..+.++.++.++++++.+||.+..+... ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 234567999999973 667789999998865432 2334455567899999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ +.+|++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999986 35 46999999996 678899
Q ss_pred CCC
Q 047682 1062 GPL 1064 (1425)
Q Consensus 1062 G~~ 1064 (1425)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 985
No 245
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.5e-35 Score=330.38 Aligned_cols=215 Identities=25% Similarity=0.310 Sum_probs=177.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56778877652 2469999999999999999999999999999999999765 34799999998753
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 907 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-----PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.. ..++.++|++|++.+++.+||+||+.+....... .....+..++.++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 21 1234699999999999999999999886432100 0011233445688999999998776665 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 799999999986 57788999999997 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888875
No 246
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.2e-35 Score=329.73 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=170.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc--cceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP--QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 211 (1425)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 45999999999999999999999999999999999999998 9999999988754322 257999999988888999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.....+.. . .+....++++++.+||+...++.++
T Consensus 91 ~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------R------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 999998754322100 0 0012235678889999877766554
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| ++.++|+.+++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-iii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLS-VLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCE-EEEEecChhhHh-hCCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999987543444 555677777775 599999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887753
No 247
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=9.3e-35 Score=340.94 Aligned_cols=214 Identities=22% Similarity=0.263 Sum_probs=176.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCC--
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHD-- 204 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 204 (1425)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|+++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 469999999999999999999999999999999999998742238999999998865432 14799999986
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+.+.+||.+++.+....... .. ..+...++.++++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MS------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CC------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 688999999999875432110 00 01112346678899999764322
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. ++.+++|||||||||+||+||+.+|+++++||||+|||..++.++.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEE
Confidence 2 35667899999999999999999999999999999999999999999999997654 456666889999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 248
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-35 Score=324.78 Aligned_cols=194 Identities=26% Similarity=0.332 Sum_probs=163.4
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHHHHH
Q 047682 857 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-ETFARISGYCEQNDIHSPNVTVYESLLY 935 (1425)
Q Consensus 857 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~ 935 (1425)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999865 357999999987543 1234679999999999999999999987
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 047682 936 SAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1015 (1425)
Q Consensus 936 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~ 1015 (1425)
....+. .. .+..++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 123345678999999998777765 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 1016 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 1016 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
.+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999986 57788999999997 5666543
No 249
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.7e-35 Score=327.16 Aligned_cols=203 Identities=34% Similarity=0.556 Sum_probs=164.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD---PSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 569999999999999999999999999999999999998 77 999999999876434457899999999899999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHH-HHHHhCCcccccccccCcc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDY-VIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~ 289 (1425)
||+||+.++......... . . .......+. .++.+++++..++.+
T Consensus 97 tv~enl~~~~~~~~~~~~--------------------~-~----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (226)
T cd03234 97 TVRETLTYTAILRLPRKS--------------------S-D----------AIRKKRVEDVLLRDLALTRIGGNLV---- 141 (226)
T ss_pred cHHHHHHHHHHhhccccc--------------------c-h----------HHHHHHHHHHHHHhhcchhhhcccc----
Confidence 999999987543211000 0 0 000112233 788888876655544
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ .+.|++++.|++..++.+++|++++|++
T Consensus 142 -~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 142 -KGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred -cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999865 3556655444434689999999999999
Q ss_pred CeEEEec
Q 047682 370 GQIVFQG 376 (1425)
Q Consensus 370 G~iv~~G 376 (1425)
|+++++|
T Consensus 220 G~i~~~g 226 (226)
T cd03234 220 GEIVYSG 226 (226)
T ss_pred CEEEecC
Confidence 9999876
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-35 Score=320.79 Aligned_cols=179 Identities=45% Similarity=0.767 Sum_probs=155.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEECCccCCCCC--ccceEEEEccCCCCC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD---PSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHI 207 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~ 207 (1425)
++.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 19 ~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~ 95 (202)
T cd03233 19 KIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHF 95 (202)
T ss_pred CceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccC
Confidence 4569999999999999999999999999999999999998 66 999999999876532 346799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++++.. .+
T Consensus 96 ~~~tv~~~l~~~~~~~---------------------------------------------------------~~----- 113 (202)
T cd03233 96 PTLTVRETLDFALRCK---------------------------------------------------------GN----- 113 (202)
T ss_pred CCCcHHHHHhhhhhhc---------------------------------------------------------cc-----
Confidence 9999999998753210 11
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.....||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.|+++++||+.+++.+.+|++++|
T Consensus 114 ~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l 193 (202)
T cd03233 114 EFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVL 193 (202)
T ss_pred cchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEE
Confidence 22346999999999999999999999999999999999999999999999876445677777778788999999999999
Q ss_pred cCCeEEEec
Q 047682 368 SEGQIVFQG 376 (1425)
Q Consensus 368 ~~G~iv~~G 376 (1425)
++|++++.|
T Consensus 194 ~~G~i~~~g 202 (202)
T cd03233 194 YEGRQIYYG 202 (202)
T ss_pred ECCEEEecC
Confidence 999998765
No 251
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.7e-35 Score=342.47 Aligned_cols=208 Identities=22% Similarity=0.261 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCC--C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHD--V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 205 (1425)
.++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999997 9999999998865432 35799999986 5
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
+++.+||.||+.+..+..... ..+ .+....++++++.+||. ...++
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~--------~~~------------------------~~~~~~~~~~l~~vgl~~~~~~~- 157 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPK--------LSR------------------------QEVKDRVKAMMLKVGLLPNLINR- 157 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccC--------CCH------------------------HHHHHHHHHHHHHcCCChHHhcC-
Confidence 788999999999864322100 000 11223456789999994 34444
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
.+..|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 158 ----~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 158 ----YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 455799999999999999999999999999999999999999999999987643 455666899999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 252
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.8e-35 Score=328.91 Aligned_cols=232 Identities=22% Similarity=0.271 Sum_probs=180.7
Q ss_pred EEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHh
Q 047682 89 RFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALA 168 (1425)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~ 168 (1425)
+.+|++.++.... ..+++.+..++.+ .++.+.+++|+|+|+++++|++++|+|||||||||||++|+
T Consensus 2 ~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~ 68 (236)
T cd03267 2 EVSNLSKSYRVYS---KEPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILS 68 (236)
T ss_pred ceecchhhccCcC---CccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 4677777775532 2233333333322 22334567999999999999999999999999999999999
Q ss_pred cCCCCCCCcccEEEECCccCCCC--CccceEEEEc-cCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCC
Q 047682 169 GKLDPSLKLSGRVTYNGHNMDEF--VPQRTAAYIS-QHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIK 245 (1425)
Q Consensus 169 G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~ 245 (1425)
|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.+||+|++.+.....+...
T Consensus 69 Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~------------------ 127 (236)
T cd03267 69 GLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP------------------ 127 (236)
T ss_pred CCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH------------------
Confidence 999998 99999999875432 1246799997 54667789999999988644321100
Q ss_pred CCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCCh
Q 047682 246 PDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDS 325 (1425)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~ 325 (1425)
++....++.+++.+||++..++.++ .||||||||++||+||+.+|++++|||||+|||+
T Consensus 128 ----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 128 ----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred ----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 0112235678889999988887664 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEec
Q 047682 326 STTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQG 376 (1425)
Q Consensus 326 ~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 376 (1425)
.++..+.+.|+++++..+. +|+.++|+.+++.+++|++++|++|++++.|
T Consensus 187 ~~~~~l~~~l~~~~~~~~~-tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 187 VAQENIRNFLKEYNRERGT-TVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHhcCCC-EEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998654344 4555788888899999999999999998765
No 253
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=336.01 Aligned_cols=213 Identities=24% Similarity=0.347 Sum_probs=176.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56778877663 2359999999999999999999999999999999999765 35899999998753
Q ss_pred c-----ccccceEEEeecCCCC-CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q-----ETFARISGYCEQNDIH-SPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. ...++.+||++|++.. +...|+.||+.+....+ ....++.++.++++++.+++.+..+.. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1234679999999753 34568999998764332 223344455678899999998777665 45799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999997 67888
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 254
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.7e-35 Score=325.66 Aligned_cols=195 Identities=27% Similarity=0.374 Sum_probs=165.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-CccceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-VPQRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999988 99999999877542 124579999999888989999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.+.....+. ....++++++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999886432110 01234667888999877666554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.| ++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-ii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGIT-VLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 3444 55578888889999999999999999
Q ss_pred EEec
Q 047682 373 VFQG 376 (1425)
Q Consensus 373 v~~G 376 (1425)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 255
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.07 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=167.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999998 99999999987542 34689999998888889999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||+.++....+.. . .+....++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 9998864322110 0 011224567889999987666544 459
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc--CCe
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS--EGQ 371 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 371 (1425)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.++||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999999865434 445557888889999999999998 599
Q ss_pred EEEecChh
Q 047682 372 IVFQGPRE 379 (1425)
Q Consensus 372 iv~~G~~~ 379 (1425)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99888653
No 256
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-35 Score=319.65 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=162.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEcCcc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKISGYP 904 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~g~~ 904 (1425)
.++|+|++|.++.+ .+++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58999999998632 13457999999999999999999999999999999999976522 468999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 905 KKQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 905 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
... ...++.++|++|++.+++.+||+||+.+....+ .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 543 234567999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766654468889999999997 677765
Q ss_pred C
Q 047682 1062 G 1062 (1425)
Q Consensus 1062 G 1062 (1425)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 257
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-35 Score=333.26 Aligned_cols=217 Identities=26% Similarity=0.345 Sum_probs=179.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67788887662 2469999999999999999999999999999999999755 35799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.++|++|+..+++.+|+.|++.+....... .....+..++.++++++.+++.+..+.. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23445689999999888889999999875311000 0111123345678899999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998877999999999996 58889999999997 6788888
Q ss_pred CCC
Q 047682 1063 PLG 1065 (1425)
Q Consensus 1063 ~~~ 1065 (1425)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 864
No 258
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.1e-35 Score=327.69 Aligned_cols=198 Identities=31% Similarity=0.468 Sum_probs=166.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCCH
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 212 (1425)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 999999999875421 24679999999988888999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.+.....+.. ..+....++++++.+||++..+..++ .
T Consensus 96 ~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------------------------------GDELTARLEELADRLGMEELLDRRVG-----G 136 (218)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhhhhh-----h
Confidence 99998754322110 00112345678999999877766554 5
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LG-KCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999854 34 4555578888899999999999999999
Q ss_pred EEec
Q 047682 373 VFQG 376 (1425)
Q Consensus 373 v~~G 376 (1425)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8754
No 259
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-35 Score=298.76 Aligned_cols=200 Identities=27% Similarity=0.393 Sum_probs=176.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYE 931 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 931 (1425)
..+|+|||++|.+||.++++||||||||||||+++|..+ +..|.|.+||.++....- ..|.|+|++.++|-+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999877 458999999998754322 3489999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 047682 932 SLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1011 (1425)
Q Consensus 932 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~ 1011 (1425)
|+.|+..++ .+++.++++.+.+.+..+||.+..+.. +-.||||||||+.|||||+.+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 578889999999999999999887765 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCEEEEEeCC-cEEEEECCC
Q 047682 1012 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GYEIYVGPL 1064 (1425)
Q Consensus 1012 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G-g~~~y~G~~ 1064 (1425)
-+++.++++|-++. ++|+.++++||+.. |..-+++++++|+.| |+++.-=|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 99999999998876 45999999999986 455577999999843 566665555
No 260
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=333.59 Aligned_cols=220 Identities=27% Similarity=0.355 Sum_probs=180.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEcCcc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKISGYP 904 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~g~~ 904 (1425)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 377888887663 246999999999999999999999999999999999976532 236999999986
Q ss_pred CCc--------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 047682 905 KKQ--------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-----PDVDSETRRMFLEEIMELVELNPLRQSLV 971 (1425)
Q Consensus 905 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 971 (1425)
... ...++.++|++|++.+++.+||.||+.+......+ .....++.++.++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999999999999999875321100 01112334456889999999987777653
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEE
Q 047682 972 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1050 (1425)
Q Consensus 972 g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~ 1050 (1425)
..||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|+++ .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999754 899999999986 4788999999
Q ss_pred EEeCCcEEEEECCCC
Q 047682 1051 LMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1051 ~l~~Gg~~~y~G~~~ 1065 (1425)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9996 6778988864
No 261
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=347.86 Aligned_cols=201 Identities=24% Similarity=0.302 Sum_probs=173.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeecCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE---T----FARISGYCEQNDIHS 924 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~~~ 924 (1425)
..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++... . .++.+||++|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 468999999999999999999999999999999999765 3479999999875421 1 235799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 047682 925 PNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1425)
Q Consensus 925 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDE 1004 (1425)
+.+||+||+.+....+ ....++.++.+.++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||
T Consensus 119 ~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 9999999999876543 233444556788999999998877765 45799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1005 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999986 57889999999997 688888875
No 262
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=322.97 Aligned_cols=215 Identities=24% Similarity=0.323 Sum_probs=180.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCcccEEEECCccCCCCCc-------cceEEEEccC
Q 047682 133 KFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD-P-SLKLSGRVTYNGHNMDEFVP-------QRTAAYISQH 203 (1425)
Q Consensus 133 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 203 (1425)
..++++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4569999999999999999999999999999999999997 4 33467999999998755442 2579999998
Q ss_pred C--CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc
Q 047682 204 D--VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCA 281 (1425)
Q Consensus 204 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 281 (1425)
+ .+-|.+||.+.+.-..+...... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 4 78899999999876544321000 0112344567889999998643
Q ss_pred cccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhc
Q 047682 282 DTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLF 361 (1425)
Q Consensus 282 ~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~ 361 (1425)
. +-+.++.+|||||||||.||.||+.+|++||.|||||+||..++.+|++.|+++.++ .+++++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 2 335778899999999999999999999999999999999999999999999999874 4677777999999999999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 047682 362 DDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 362 D~vilL~~G~iv~~G~~~~~~ 382 (1425)
|||+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999884
No 263
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=329.35 Aligned_cols=219 Identities=22% Similarity=0.291 Sum_probs=175.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCC---CCceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~---~~~~~~G~i~i~g 902 (1425)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 477888887663 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++ .|+.||+.+....+. ....+..++.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988876 699999987654331 11223344567889999998642211111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4899999999997 57789999999986 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 8999975
No 264
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.22 Aligned_cols=217 Identities=19% Similarity=0.242 Sum_probs=178.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
.++++|+++.++ .+.+|+|+|++|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377888888763 246999999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|+..+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999987654331 1123344556788999998842 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 689999999986 5778999999997
Q ss_pred C-----CcEEEEECCC
Q 047682 1054 R-----GGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~-----Gg~~~y~G~~ 1064 (1425)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4788999875
No 265
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=336.06 Aligned_cols=218 Identities=23% Similarity=0.324 Sum_probs=176.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ....+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 36788888876310 0011359999999999999999999999999999999999765 3589999999875
Q ss_pred Cc-------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCC
Q 047682 906 KQ-------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPG 975 (1425)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~ 975 (1425)
.. ...++.++|++|++ .+++ .||+||+.+..... ..+.++.++.++++++.++|.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN----- 142 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 23456789999986 3444 69999998764322 2233444556788999999963 44544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 143 PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 57788999999996
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 678888875
No 266
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-35 Score=334.06 Aligned_cols=218 Identities=22% Similarity=0.288 Sum_probs=180.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 588899988773 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.++|++|++.+++..|++|++.+...-..+ .....+..++.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23345789999999988899999999865211100 0011123345678999999998776665 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999864 899999999986 58899999999986 67889
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99864
No 267
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-35 Score=330.22 Aligned_cols=194 Identities=22% Similarity=0.295 Sum_probs=165.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHH
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRE 214 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 214 (1425)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999998 9999999987643 2467999999988888899999
Q ss_pred HHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 047682 215 TLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGIS 294 (1425)
Q Consensus 215 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LS 294 (1425)
|+.++... . ....++.+++.+||++..+..+ ..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 99874210 0 0113456788899987666554 4699
Q ss_pred hhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEE
Q 047682 295 GGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVF 374 (1425)
Q Consensus 295 GGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 374 (1425)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-viivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFT-VLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999986544445 5557888888899999999999999999
Q ss_pred ecChh
Q 047682 375 QGPRE 379 (1425)
Q Consensus 375 ~G~~~ 379 (1425)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 268
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-35 Score=317.61 Aligned_cols=190 Identities=59% Similarity=0.953 Sum_probs=161.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 36788888877421 012469999999999999999999999999999999999643224589999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 344567999999998999999999998643110 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998644678899999998757888875
No 269
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.89 Aligned_cols=219 Identities=24% Similarity=0.302 Sum_probs=175.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC---CceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~---~~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... ..+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 588999988763 2369999999999999999999999999999999999632 113579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+........ .+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHE-SAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87532 133567999999988887 599999988654321 112233345678889999985421111111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999854 799999999986 57788999999997 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 8888875
No 270
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=339.41 Aligned_cols=214 Identities=20% Similarity=0.228 Sum_probs=173.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCccCCCCCc-------cceEEEEccCC-
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL-KLSGRVTYNGHNMDEFVP-------QRTAAYISQHD- 204 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 204 (1425)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987421 128999999998865432 13699999986
Q ss_pred -CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 047682 205 -VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADT 283 (1425)
Q Consensus 205 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 283 (1425)
.+.|.+||.+++....+.... . ...+....++++++.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~------------------------~~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------G------------------------NKKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------C------------------------CHHHHHHHHHHHHHHCCCCChHH-
Confidence 478899999998765432100 0 00112335677899999975221
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
+-++.++.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+..+ ++++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g-~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN-MALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCE
Confidence 11244567999999999999999999999999999999999999999999999976544 4566688999999999999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 047682 364 IILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~~ 383 (1425)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999998853
No 271
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.1e-35 Score=322.96 Aligned_cols=194 Identities=26% Similarity=0.390 Sum_probs=162.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999999988 999999999876542 235799999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++....+.. ....+..++++++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------------------------------EREIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCh--
Confidence 8999999999865422100 0011234567889999987666555
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|+..++.++||++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEe
Confidence 45999999999999999999999999999999999999999999999854 34 45555788888999999999999
Q ss_pred cCCe
Q 047682 368 SEGQ 371 (1425)
Q Consensus 368 ~~G~ 371 (1425)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 272
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=327.87 Aligned_cols=203 Identities=24% Similarity=0.372 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 3569999999888988
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVL-GLDVCADTMVGDE 288 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~ 288 (1425)
+||+||+.++..... . . +....++.+++.+ ++.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~---------~------------------------~~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R---------D------------------------QFQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h---------h------------------------HHHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999987532110 0 0 0011233455555 455444443
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.| ++.++|+.+++.+++|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMT-IFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCE-EEEEeCcHHHHHhhCCEEEEEe
Confidence 346999999999999999999999999999999999999999999999865 3445 5557888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988774
No 273
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-34 Score=332.16 Aligned_cols=223 Identities=23% Similarity=0.297 Sum_probs=178.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.....+ ..+++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67788887763110000 0113579999999999999999999999999999999999765 35899999998754
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 047682 907 QE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 977 (1425)
.. ..++.++|++|++ .+.+.+||+|++.+..... ........++.++++++.+++. +..+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1345799999996 4667899999997654311 1222334455688999999995 555554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998865 899999999986 57778999999986 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 88899886
No 274
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=325.52 Aligned_cols=212 Identities=27% Similarity=0.394 Sum_probs=178.6
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
.++|+++.++ .+.+++|+|++++||++++|+|+||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4677777652 24699999999999999999999999999999999997653 47999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 908 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 908 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
. ..++.++|++|+...++.+|+.||+.+....+ ..+....++.++++++.+++.+..+.. +..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHH
Confidence 1 23467899999999988999999998765433 123334455678899999998877765 35799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 57889999999997 677888864
No 275
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.5e-34 Score=324.43 Aligned_cols=212 Identities=25% Similarity=0.359 Sum_probs=174.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47889988776310 011359999999999999999999999999999999999765 3489999999875
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 906 KQET------F-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 906 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
.... . ++.++|++|++.+++.+|+.||+.+....+ .....+.++.++++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 4211 1 246999999998999999999998765432 123344456788999999998776665 347
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999986 34 56999999997 56
Q ss_pred EE
Q 047682 1058 EI 1059 (1425)
Q Consensus 1058 ~~ 1059 (1425)
++
T Consensus 224 i~ 225 (228)
T PRK10584 224 LQ 225 (228)
T ss_pred EE
Confidence 54
No 276
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-35 Score=333.32 Aligned_cols=218 Identities=28% Similarity=0.373 Sum_probs=179.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478889887662 2469999999999999999999999999999999999765 3579999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888899999999875321110 00111223456788999999987766653 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57789999999996 67888
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88763
No 277
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6.4e-35 Score=327.21 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=166.6
Q ss_pred eeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHH
Q 047682 855 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLL 934 (1425)
Q Consensus 855 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 934 (1425)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 578999999999999999999999999999999865 35899999998764321 12489999999999999999998
Q ss_pred HHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 047682 935 YSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1014 (1425)
Q Consensus 935 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~ 1014 (1425)
+......+ ..+.++.++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 233344455678999999998777665 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1015 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1015 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57888999999997 677877764
No 278
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-35 Score=325.02 Aligned_cols=197 Identities=29% Similarity=0.444 Sum_probs=166.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--ccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 211 (1425)
.++|+|+|+++++| +++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 35999999999999 99999999999999999999999998 999999998875432 2467999999988899999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.+.....+.. + .+....++.+++.+||++..++.++
T Consensus 89 v~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 129 (211)
T cd03264 89 VREFLDYIAWLKGIP----------S------------------------KEVKARVDEVLELVNLGDRAKKKIG----- 129 (211)
T ss_pred HHHHHHHHHHHhCCC----------H------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----
Confidence 999999864432110 0 0112245678899999877776554
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++ + ++++.++|+..++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 4 556667888888989999999999999
Q ss_pred EEEec
Q 047682 372 IVFQG 376 (1425)
Q Consensus 372 iv~~G 376 (1425)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 279
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.3e-34 Score=323.32 Aligned_cols=196 Identities=23% Similarity=0.351 Sum_probs=161.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------c-ceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------Q-RTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~-~~~~yv~Q~d~~ 206 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... + +.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999998 9999999998765432 1 569999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++.+||+||+.++....... . .+....++++++.+||++..++.+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------V------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 88999999999864321100 0 011223567889999987666554
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++++..+.|+ +.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~ti-i~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSF-LVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEE-EEEeCCHHHHh-hcCEEEE
Confidence 45999999999999999999999999999999999999999999999875444554 44667776664 5799999
Q ss_pred EcCCeEE
Q 047682 367 ISEGQIV 373 (1425)
Q Consensus 367 L~~G~iv 373 (1425)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 280
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.71 Aligned_cols=214 Identities=29% Similarity=0.351 Sum_probs=177.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788887663 12359999999999999999999999999999999999765 34799999998753
Q ss_pred c-----ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. ...++.++|++|++. .+...||.|++.+..... ....++.++.+.++++.++|.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKP-----PHHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCC-----hhhCC
Confidence 1 123567999999963 334579999998764321 233444556688999999998887776 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999997 68888
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 281
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=337.49 Aligned_cols=208 Identities=20% Similarity=0.247 Sum_probs=174.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCC--C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHD--V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 205 (1425)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999999987 999999999886543 235799999986 5
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV-CADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~ 284 (1425)
+.+.+||.+++....+.... ..+ .+...++.++++.+||+. ..++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSA------------------------AERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCH------------------------HHHHHHHHHHHHHCCCChHHhcCC
Confidence 88899999999875432210 000 012235678899999963 45544
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987654 455666899999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 282
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.47 Aligned_cols=217 Identities=21% Similarity=0.248 Sum_probs=177.5
Q ss_pred CceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-ceEEEEEEE
Q 047682 824 PLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKI 900 (1425)
Q Consensus 824 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~-~~~~G~i~i 900 (1425)
...++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34588999988763 2369999999999999999999999999999999999753 1 135799999
Q ss_pred cCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 047682 901 SGYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLV 971 (1425)
Q Consensus 901 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~ 971 (1425)
+|.+... ...++.++|++|+..+++ .|++||+.+....+. ..+.++.++.++++++.+++.+ ..+..
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 153 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS- 153 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC-
Confidence 9987531 234567999999988877 899999987653221 2333444566889999999843 23332
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEE
Q 047682 972 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1051 (1425)
Q Consensus 972 g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~ 1051 (1425)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|++++
T Consensus 154 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~ 227 (260)
T PRK10744 154 ----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAF 227 (260)
T ss_pred ----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEE
Confidence 45799999999999999999999999999999999999999999999996 4789999999986 57788999999
Q ss_pred EeCCcEEEEECCC
Q 047682 1052 MKRGGYEIYVGPL 1064 (1425)
Q Consensus 1052 l~~Gg~~~y~G~~ 1064 (1425)
|++ |+++..|+.
T Consensus 228 l~~-G~i~~~g~~ 239 (260)
T PRK10744 228 MYL-GELIEFGNT 239 (260)
T ss_pred EEC-CEEEEeCCH
Confidence 996 688888875
No 283
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.22 Aligned_cols=215 Identities=24% Similarity=0.321 Sum_probs=179.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788999877631 23469999999999999999999999999999999999765 3479999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ..+++.+||++|++. .++.+||+||+.+..... ..+.++.++.++++++.++|.+..+.. ++.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCC-----cccCCH
Confidence 43 234667999999974 567899999998764322 223444456788999999998877766 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 599999999986 34 57999999997 67788
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 284
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.5e-35 Score=371.26 Aligned_cols=206 Identities=23% Similarity=0.322 Sum_probs=166.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++++|||.++|+|+||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 4899999999999999999999999999999999999998 9999999999887654 5789999998776654 9
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++|||.++.. . +.+.+.+++...+ .++.++ .|++..||.+|+.+.
T Consensus 431 i~~NI~~~~~---~-----------------------~d~~i~~a~~~~g------l~~~i~--~lp~Gldt~i~e~g~- 475 (592)
T PRK10790 431 FLANVTLGRD---I-----------------------SEEQVWQALETVQ------LAELAR--SLPDGLYTPLGEQGN- 475 (592)
T ss_pred HHHHHHhCCC---C-----------------------CHHHHHHHHHHcC------cHHHHH--hccccccccccCCCC-
Confidence 9999998631 0 0111111111111 111222 256778999998654
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++|||||+++|++++||||||+||+.++..|.+.|+++.. ++|+|++ +|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIiv-tHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVI-AHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEE-ecch-HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998743 5666664 4443 5677899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++..|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 285
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.2e-34 Score=323.71 Aligned_cols=170 Identities=25% Similarity=0.312 Sum_probs=133.9
Q ss_pred eeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHh
Q 047682 858 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSA 937 (1425)
Q Consensus 858 vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~ 937 (1425)
=.++|..||+++++||||-||||+.++|+|-.++ .+|. .. .-.++|=||--.-....||++-|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhh
Confidence 4567889999999999999999999999997653 2444 10 124678888755557889999875433
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHH
Q 047682 938 WLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1017 (1425)
Q Consensus 938 ~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i 1017 (1425)
.-+.. ..-+..++.+-|.|.++.+..+ .+|||||.|||+||.+|.+++++.+||||++.||++.+..+
T Consensus 427 ~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~v 494 (591)
T COG1245 427 RSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIV 494 (591)
T ss_pred hhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHH
Confidence 21111 1123467888899999888874 57999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 1018 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 1018 ~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
-++||+.... ++|.+++-||... +--..||+++.+
T Consensus 495 akvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 495 AKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999998754 7899999999753 444568877665
No 286
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.57 Aligned_cols=205 Identities=25% Similarity=0.349 Sum_probs=169.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC----ccceEEEEccCCC-CCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV----PQRTAAYISQHDV-HIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 208 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999876422 2467999999863 344
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
..||.|++.|+....+.. ..+....++++++.+||+...++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------------------------------PEEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 579999999875322110 00112346788999999887776654
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|+..++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-illvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGIT-IILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecChHHHhc-CCEEEEEE
Confidence 599999999999999999999999999999999999999999999986543444 4546777777765 99999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 287
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.9e-35 Score=326.69 Aligned_cols=210 Identities=26% Similarity=0.323 Sum_probs=172.6
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4677776652 2469999999999999999999999999999999999765 357999999987542
Q ss_pred c----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcC-CccccccccCCCCCCcCCHH
Q 047682 908 E----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVE-LNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 908 ~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ..++.++|++|+..+++.+|+.|++.+....+. .. .++..+++++.++ +.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124568999999999999999999987654321 11 1233567777776 45555554 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998864 899999999986 57778999999986 678898
Q ss_pred CCCC
Q 047682 1062 GPLG 1065 (1425)
Q Consensus 1062 G~~~ 1065 (1425)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 8864
No 288
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.7e-35 Score=378.34 Aligned_cols=255 Identities=24% Similarity=0.393 Sum_probs=193.5
Q ss_pred HHhHHHHHHhhhhcccCHHHHHHHHHHHHhhcCCCCC--ceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhc
Q 047682 48 LERQRLIDKLVKVADVDNEQLLLKLKNRVDRVGISLP--EIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLH 125 (1425)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (1425)
++-+.-++|+.++.+.+++.. .+....+.+ ...++|+|+++.++.
T Consensus 429 ~~~~~~~~ri~~il~~~~e~~-------~~~~~~~~~~~~~~I~~~~vsf~Y~~-------------------------- 475 (694)
T TIGR03375 429 QQAKTALQSLDELMQLPVERP-------EGTRFLHRPRLQGEIEFRNVSFAYPG-------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHcCCCCCC-------CCCCCCCCCCccceEEEEEEEEEeCC--------------------------
Confidence 455566667666666544310 000001111 246899999988732
Q ss_pred cccCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEcc
Q 047682 126 ILPSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQ 202 (1425)
Q Consensus 126 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 202 (1425)
.++++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|
T Consensus 476 ------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q 546 (694)
T TIGR03375 476 ------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQ 546 (694)
T ss_pred ------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECC
Confidence 1235899999999999999999999999999999999999998 9999999999887654 578999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 047682 203 HDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCAD 282 (1425)
Q Consensus 203 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 282 (1425)
++.+| +.|++|||.++.. +.+.+++.+++...+ .+..+ -.|++..|
T Consensus 547 ~~~lf-~~TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i--~~lp~gl~ 592 (694)
T TIGR03375 547 DPRLF-YGTLRDNIALGAP-------------------------YADDEEILRAAELAG------VTEFV--RRHPDGLD 592 (694)
T ss_pred Chhhh-hhhHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC------hHHHH--HhCccccc
Confidence 77655 5699999998521 122223333322211 11112 24677889
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
|.+|+.+. .||||||||++||||++.+|++++||||||+||+.++..|.+.|+++.+ ++|+|+ ++|.. ++.+.||
T Consensus 593 T~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~ii-ItHrl-~~~~~~D 667 (694)
T TIGR03375 593 MQIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVL-VTHRT-SLLDLVD 667 (694)
T ss_pred ceecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCH-HHHHhCC
Confidence 99998764 6999999999999999999999999999999999999999999998743 566666 44444 4668999
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 047682 363 DIILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 363 ~vilL~~G~iv~~G~~~~~~~ 383 (1425)
+|++|++|+++++|+++++++
T Consensus 668 ~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 668 RIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEEeCCEEEeeCCHHHHHH
Confidence 999999999999999999875
No 289
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.4e-35 Score=331.59 Aligned_cols=217 Identities=28% Similarity=0.390 Sum_probs=177.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 46777777652 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAW-LRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ...++.++|++|++.+++.+||+||+.+... .+........+..+.+.++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHH
Confidence 2 2334568999999877888999999987521 10000011122345678899999998777765 3479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 57789999999997 5788888
Q ss_pred CCC
Q 047682 1063 PLG 1065 (1425)
Q Consensus 1063 ~~~ 1065 (1425)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 763
No 290
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-35 Score=346.80 Aligned_cols=213 Identities=27% Similarity=0.465 Sum_probs=179.5
Q ss_pred cCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcC
Q 047682 823 EPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISG 902 (1425)
Q Consensus 823 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g 902 (1425)
.++.++.+|+++.++ +.+++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 456677789998874 233799999999999999999999999999999999998764 589999999
Q ss_pred ccCC---cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcccccc------ccCC
Q 047682 903 YPKK---QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQS------LVGL 973 (1425)
Q Consensus 903 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~------~~g~ 973 (1425)
.+.. ...+++.++||+|++.+++. |++||+.++. ++.++++ +.++++..++.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~-----~~~s~e~----i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR-----PDASDEE----IIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC-----CcCCHHH----HHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 45688999999999988765 9999998752 2333333 6778888888766544 3443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3578999999999999999999999999999999999999999999999986 599999999984 567789999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 6 688888875
No 291
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=332.28 Aligned_cols=205 Identities=24% Similarity=0.359 Sum_probs=171.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGEM 210 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 210 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2357999999853 45578
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.++....+.. ..+....++++++.+||.+..++.++
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVPH---- 136 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCcc----
Confidence 9999998764321110 00112346778999999877776654
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+.||+|++|++|
T Consensus 137 -~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 137 -HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYG-MTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999876434 55565788888999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 292
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-35 Score=329.34 Aligned_cols=206 Identities=20% Similarity=0.346 Sum_probs=171.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++..... ++.++|++|++..++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999998 9999999998765432 3579999999888888
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.+..+.... .. ..+....++.+++.+||++..+..+
T Consensus 93 ~tv~enl~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LS------------------------AEQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhcccc---------cC------------------------HHHHHHHHHHHHHHcCCHHHhhcch----
Confidence 9999999875432100 00 0011234567889999986655544
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.++++.+ .+. +++.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~-tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGL-GVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCC-EEEEEEcCHHHHHHhcCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998864 344 455567888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 293
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=332.26 Aligned_cols=205 Identities=25% Similarity=0.355 Sum_probs=168.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 209 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999998 999999999886432 2467999999863 6778
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++....+.. ..+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 99999999864321100 0011234677889999987777655
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. ++++++.++|+.+++ ..+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~-~~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEA-ILADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHH-hhCCEEEEEEC
Confidence 459999999999999999999999999999999999999999999998653 334444456666666 47999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 294
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=362.49 Aligned_cols=220 Identities=21% Similarity=0.307 Sum_probs=184.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 6 l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 78889888763 24699999999999999999999999999999999997654335899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
.. ..++.+||++|++.+++.+||+||+.+....+.....+.++.++.++++++.+++.+..+..+ ..||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHH
Confidence 32 124569999999988999999999988653321111223344556889999999987777654 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeec
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999996 6888999
Q ss_pred CCCC
Q 047682 1063 PLGR 1066 (1425)
Q Consensus 1063 ~~~~ 1066 (1425)
+..+
T Consensus 226 ~~~~ 229 (506)
T PRK13549 226 PAAG 229 (506)
T ss_pred cccc
Confidence 8754
No 295
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.8e-34 Score=328.56 Aligned_cols=206 Identities=22% Similarity=0.317 Sum_probs=171.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC----------------ccceE
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV----------------PQRTA 197 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 197 (1425)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 35999999999999999999999999999999999999998 999999998875321 24679
Q ss_pred EEEccCCCCCCCCCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC
Q 047682 198 AYISQHDVHIGEMTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLG 276 (1425)
Q Consensus 198 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 276 (1425)
+|++|++.+++..||+||+.++... .+.. . .+....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcC
Confidence 9999998889999999999875321 0000 0 011223567889999
Q ss_pred CcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhh
Q 047682 277 LDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPE 356 (1425)
Q Consensus 277 L~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~ 356 (1425)
+++..+..+ +.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++++.++|+.++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEH-DLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHH
Confidence 987666544 4699999999999999999999999999999999999999999999987643 4555557888889
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 047682 357 TYDLFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 357 ~~~~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 296
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.3e-34 Score=326.73 Aligned_cols=206 Identities=22% Similarity=0.384 Sum_probs=169.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999863 22389999999987542 1246799999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD----VCADT 283 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t 283 (1425)
+ +||+||+.++.+..+... . .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------K------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 999999998654321000 0 01122456788999997 44444
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
. ++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 4 456999999999999999999999999999999999999999999999865 3 4555578888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 047682 364 IILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~ 382 (1425)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 297
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-34 Score=318.78 Aligned_cols=198 Identities=20% Similarity=0.315 Sum_probs=152.1
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.+-.+||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|...+ ..|+..-|
T Consensus 586 vLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn---- 647 (807)
T KOG0066|consen 586 VLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN---- 647 (807)
T ss_pred eeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc----
Confidence 467788888764 356799999999999999999999999999999999997764 35654322
Q ss_pred CcccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 906 KQETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
.+-.+|+..|+. .+...-|.-|.|.-.. .++.++ ....|-.+||...++++- +..|||||
T Consensus 648 ----hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq~----ARK~LG~fGL~sHAHTik----ikdLSGGQ 709 (807)
T KOG0066|consen 648 ----HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQE----ARKQLGTFGLASHAHTIK----IKDLSGGQ 709 (807)
T ss_pred ----ceeeeechhhhhHHhhccccCHHHHHHHhc------CCChHH----HHHHhhhhhhhhccceEe----eeecCCcc
Confidence 223578888863 3445667778775221 222222 346778889988888763 56799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
|-||++|..-++.|+||+|||||++||..+...+-++|++. ...||+++||-.. +.+--..++|+.+.|.---.|.
T Consensus 710 KaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdGd 785 (807)
T KOG0066|consen 710 KARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDGD 785 (807)
T ss_pred hHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcccc
Confidence 99999999999999999999999999999999999999876 4679999999763 5555567888887665444443
No 298
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=329.46 Aligned_cols=222 Identities=23% Similarity=0.252 Sum_probs=179.4
Q ss_pred cCceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEE
Q 047682 823 EPLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIK 899 (1425)
Q Consensus 823 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~ 899 (1425)
.+..++++|+++.++ .+.+|+|+|+++++||++||+|||||||||||++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 334689999988763 24699999999999999999999999999999999997542 13589999
Q ss_pred EcCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 047682 900 ISGYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLP 974 (1425)
Q Consensus 900 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 974 (1425)
++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.+.++++.++|.+..+.....
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~- 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK- 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-
Confidence 99987632 123567999999988877 69999998864321 1123334456678899999985422222221
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
.+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.+|++++|++
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~ 237 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL 237 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC
Confidence 256899999999999999999999999999999999999999999999986 4799999999997 57889999999986
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 238 -G~i~~~g~~ 246 (267)
T PRK14237 238 -GDLIEYDKT 246 (267)
T ss_pred -CEEEEeCCH
Confidence 688899886
No 299
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=330.43 Aligned_cols=220 Identities=23% Similarity=0.263 Sum_probs=176.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. .....+.++.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87532 2345678999999888875 999999886543311 11223334567889999999642111111 1145
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999986 57788999999996 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 8888875
No 300
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.2e-34 Score=342.66 Aligned_cols=204 Identities=21% Similarity=0.288 Sum_probs=175.5
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc----CCc---c---cc-cceEEEee
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP----KKQ---E---TF-ARISGYCE 918 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~----~~~---~---~~-~~~~gyv~ 918 (1425)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+ ... . .. ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 34679999999999999999999999999999999999765 357999999952 211 1 11 24799999
Q ss_pred cCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCc
Q 047682 919 QNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 998 (1425)
Q Consensus 919 Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~ 998 (1425)
|+..++|.+||+||+.|....+ ..+.+++++.++++++.+||.+..+... ..||||||||++|||+|+++|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2345566677899999999988877763 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 999 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999765 899999999987 57899999999997 6888999863
No 301
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=326.13 Aligned_cols=220 Identities=21% Similarity=0.273 Sum_probs=177.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478888887763 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.++.. ..+++.++|++|+..+++.+|++||+.+....+. ..+..+.++.++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87532 2346679999999999999999999987543221 12233334567888999998642111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57789999999986 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 8888885
No 302
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=331.41 Aligned_cols=216 Identities=24% Similarity=0.294 Sum_probs=179.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788999887631 12358999999999999999999999999999999999865 3589999999875
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+.. +..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677889999998864322 223344455678999999998777665 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999996 455 4999999986 68889
Q ss_pred ECCCC
Q 047682 1061 VGPLG 1065 (1425)
Q Consensus 1061 ~G~~~ 1065 (1425)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98863
No 303
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.9e-34 Score=325.02 Aligned_cols=212 Identities=26% Similarity=0.391 Sum_probs=178.4
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4667776652 2469999999999999999999999999999999999765 347999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 908 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 908 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
. ..++.++|++|++.+++.+|+.||+.+....+ ..+.....+.++++++.+++.+..+... ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 23467999999999999999999998765433 1223334456788999999987777653 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
++||++|+++|++++|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999986 57788999999996 678888885
No 304
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=344.92 Aligned_cols=195 Identities=25% Similarity=0.412 Sum_probs=169.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-------CccceEEEEccCCCCCCCCC
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-------VPQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 211 (1425)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999887531 12467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.|+.+.. ....++++++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999999853200 0123567889999987776655 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+..++.+++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREIN-IPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 5999999999999999999999999999999999999999999999876444 455557888999999999999999999
Q ss_pred EEEecChhHHH
Q 047682 372 IVFQGPREHVL 382 (1425)
Q Consensus 372 iv~~G~~~~~~ 382 (1425)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 305
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=336.57 Aligned_cols=223 Identities=18% Similarity=0.234 Sum_probs=179.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNIKISGYP 904 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~-~-~~~G~i~i~g~~ 904 (1425)
++++|+++.++.. .+...+|+||||+|++||++||+|+||||||||+++|+|..+. + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888777421 1124699999999999999999999999999999999997542 2 358999999987
Q ss_pred CCc---cc----ccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 047682 905 KKQ---ET----FARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG 975 (1425)
Q Consensus 905 ~~~---~~----~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 975 (1425)
+.. .. .++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.+||.+..+..- ..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--VY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--CC
Confidence 542 11 124699999997 47889999998876543321 2344556677899999999975322111 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
...|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|+|++|.+
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~ 229 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA 229 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999976 4899999999986 47788999999996
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 230 -G~ive~g~~ 238 (326)
T PRK11022 230 -GQVVETGKA 238 (326)
T ss_pred -CEEEEECCH
Confidence 789999985
No 306
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.5e-33 Score=371.70 Aligned_cols=135 Identities=21% Similarity=0.271 Sum_probs=108.2
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCcCCHHHHHHHHHHHHHh---hCCc
Q 047682 923 HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 998 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqRl~ia~~L~---~~p~ 998 (1425)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44568999999876542211112233344455 47889999875 4554 3579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----CCcEEEEECCCC
Q 047682 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPLG 1065 (1425)
Q Consensus 999 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~-----~Gg~~~y~G~~~ 1065 (1425)
+++|||||+|||+.+...+++.|+++++.|.|||+++|++. .+ +.+|++++|. +||+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8999999996 368899999863
No 307
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=336.01 Aligned_cols=205 Identities=21% Similarity=0.319 Sum_probs=169.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCCC-
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHDV- 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 205 (1425)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 999999999875321 1357999999852
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
.+..+||+||+.|+....+.. . .+....++++++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 444689999999864321100 0 01123467789999996 455555
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 45999999999999999999999999999999999999999999999854 3 455666889999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 308
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.9e-35 Score=323.96 Aligned_cols=195 Identities=24% Similarity=0.371 Sum_probs=163.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999999998 999999999876532 235799999998899
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++....+.. . .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------P------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999999865432110 0 011224567889999987766655
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 45999999999999999999999999999999999999999999999854 34 45555788888898999999999
Q ss_pred cCCeE
Q 047682 368 SEGQI 372 (1425)
Q Consensus 368 ~~G~i 372 (1425)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 309
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-34 Score=326.29 Aligned_cols=202 Identities=25% Similarity=0.333 Sum_probs=166.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999998 9999999988765432 3569999999888999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC-CcccccccccCc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLG-LDVCADTMVGDE 288 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~ 288 (1425)
+||+||+.++....+.. .....+.+++.++ +++..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCC----
Confidence 99999999864321100 0011244555565 44444444
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
++.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++++.++|+.+++.+++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEG-GMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcC-CcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 44699999999999999999999999999999999999999999999986533 4455557888889999999999999
Q ss_pred CCeEEEecChhHH
Q 047682 369 EGQIVFQGPREHV 381 (1425)
Q Consensus 369 ~G~iv~~G~~~~~ 381 (1425)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 310
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=328.56 Aligned_cols=205 Identities=22% Similarity=0.314 Sum_probs=169.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC----------------CccceE
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF----------------VPQRTA 197 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 197 (1425)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 35999999999999999999999999999999999999988 99999999876421 113579
Q ss_pred EEEccCCCCCCCCCHHHHHHhhhh-hcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC
Q 047682 198 AYISQHDVHIGEMTVRETLAFSAR-CQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLG 276 (1425)
Q Consensus 198 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 276 (1425)
+|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999988989999999987532 11000 0011234567889999
Q ss_pred Ccccc-cccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChh
Q 047682 277 LDVCA-DTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAP 355 (1425)
Q Consensus 277 L~~~~-~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~ 355 (1425)
|.+.. +. ..+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 97643 43 3456999999999999999999999999999999999999999999999864 3 445555788888
Q ss_pred hHHhhcCeEEEEcCCeEEEecChhHHH
Q 047682 356 ETYDLFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 356 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 899999999999999999999988764
No 311
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.1e-34 Score=320.35 Aligned_cols=189 Identities=24% Similarity=0.381 Sum_probs=161.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC---c----ccccceEEEeecCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK---Q----ETFARISGYCEQNDIHS 924 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 924 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999765 35799999998742 1 12356799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 047682 925 PNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1425)
Q Consensus 925 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDE 1004 (1425)
+.+|++||+.+....+ .....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQK-----IYELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 223344456688999999998777765 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 047682 1005 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1052 (1425)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l 1052 (1425)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999985 34689999875
No 312
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-34 Score=320.06 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=166.4
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHH
Q 047682 854 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-ETFARISGYCEQNDIHSPNVTVYES 932 (1425)
Q Consensus 854 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 932 (1425)
.++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999765 347999999987542 2345679999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 047682 933 LLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1012 (1425)
Q Consensus 933 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~ 1012 (1425)
+.+...... ... ...++.++++++.+++.+..+.. +..||||||||++||++|+.+|++++|||||+|||..
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986542211 111 22345578899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECC
Q 047682 1013 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1063 (1425)
Q Consensus 1013 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~ 1063 (1425)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 57788999999986 67777763
No 313
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.8e-34 Score=324.99 Aligned_cols=201 Identities=29% Similarity=0.422 Sum_probs=168.6
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEee-cCCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ--ETFARISGYCE-QNDIHSPN 926 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 926 (1425)
+.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34579999999999999999999999999999999999765 358999999976432 23456789997 55677789
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 047682 927 VTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1425)
Q Consensus 927 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPT 1006 (1425)
+|++|++.+....+ ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765433 2233444556788999999988777763 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 1007 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 57788999999987 5776654
No 314
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.66 Aligned_cols=217 Identities=23% Similarity=0.287 Sum_probs=179.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCce-EEEEEEEcCcc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNIKISGYP 904 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~-~~G~i~i~g~~ 904 (1425)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788898887631 12359999999999999999999999999999999999764321 13899999987
Q ss_pred CCc---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 905 KKQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
... ...++.+||++|++. .++..||.||+.|....+ ..+.++.++.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567899999974 567899999998764322 234455556788999999998877765 45799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 34 57999999986 6888
Q ss_pred EECCC
Q 047682 1060 YVGPL 1064 (1425)
Q Consensus 1060 y~G~~ 1064 (1425)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99986
No 315
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.2e-33 Score=361.54 Aligned_cols=123 Identities=24% Similarity=0.297 Sum_probs=102.6
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCcCCHHHHHHHHHHHHHhhCC---cEEE
Q 047682 926 NVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1001 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p---~ill 1001 (1425)
.+||.|++.|...+. . . ....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~-----i-~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K-----I-ARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h-----h-hHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999998865432 1 1 123578899999763 4443 3579999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----CCcEEEEECCC
Q 047682 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPL 1064 (1425)
Q Consensus 1002 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~-----~Gg~~~y~G~~ 1064 (1425)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 346899999994 57899999986
No 316
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-35 Score=379.50 Aligned_cols=206 Identities=26% Similarity=0.362 Sum_probs=166.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|++.++ +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 35899999999999999999999999999999999999998 9999999999887653 58899999976655 66
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|++|||.++. |+.+.+.+.+++...+ .++.+ -.++...||.+|+.+
T Consensus 568 Ti~eNi~l~~-------------------------~~~~~~~i~~al~~~~------l~~~i--~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWD-------------------------PTIPDADLVRACKDAA------IHDVI--TSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCC-------------------------CCCCHHHHHHHHHHhC------CHHHH--HhCcCcccceeccCC-
Confidence 9999998752 1112222222222111 11111 236677899999876
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.+||||||||++||||++++|++++||||||+||+.++..|.+.|++ .++|+|+ ++|.. +....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999975 2566666 45554 456779999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 317
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=372.91 Aligned_cols=209 Identities=23% Similarity=0.378 Sum_probs=168.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+| +.
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLF-ND 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceee-cc
Confidence 35899999999999999999999999999999999999998 9999999999887653 47899999976666 56
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|++|||.++... +.+.+++.+++...+ .++.++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~------------------------~~~~~~i~~al~~~~------l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTE------------------------QYSREQIEEAARMAY------AMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCC------------------------CCCHHHHHHHHHHhC------cHHHHH--hcccccCceeCCCC-
Confidence 999999985210 011222222221111 111222 36778899999875
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++.+ ++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999988643 466666 44444 567889999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 318
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=326.39 Aligned_cols=219 Identities=21% Similarity=0.255 Sum_probs=175.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-ceEEEEEEEcCccC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNIKISGYPK 905 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~-~~~~G~i~i~g~~~ 905 (1425)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778877663 24699999999999999999999999999999999997431 24589999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .......++.++++++.+++.+....... .....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM-IKNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc-ccChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999988887 6999999886543311 01123334557889999999532111111 124579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57788999999996 6888888
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 319
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.72 Aligned_cols=219 Identities=25% Similarity=0.347 Sum_probs=177.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc------eEEEEEEE
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNIKI 900 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~------~~~G~i~i 900 (1425)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778777652 246999999999999999999999999999999999976432 12799999
Q ss_pred cCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccC-CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 047682 901 SGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRL-PPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGV 976 (1425)
Q Consensus 901 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 976 (1425)
+|.+... ..+++.++|++|++..++.+|++||+.+....+. .......+.++.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987532 2345568999999876667999999987532111 00111123345678899999998766654 4
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhc
Q 047682 977 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1046 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~---------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~f 1046 (1425)
..||||||||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998776 899999999986 577889
Q ss_pred CEEEEEeCCcEEEEECCCC
Q 047682 1047 DELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1047 D~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999996 6888999864
No 320
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=336.38 Aligned_cols=226 Identities=24% Similarity=0.260 Sum_probs=183.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++.+|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478889888774321000 001235799999999999999999999999999999999997653 479999999875
Q ss_pred Cc------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 047682 906 KQ------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLVGLPGV 976 (1425)
Q Consensus 906 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 976 (1425)
.. ..+++.++|++|++ .+.|.+|+.+++....... ......+.++.+.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999997 5789999999997654332 12344556677899999999963 44544 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
..||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+.+ .+.+.+|+|++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 999999999986 46678999999996
Q ss_pred cEEEEECCCC
Q 047682 1056 GYEIYVGPLG 1065 (1425)
Q Consensus 1056 g~~~y~G~~~ 1065 (1425)
|+++..|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 6889999863
No 321
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=329.40 Aligned_cols=204 Identities=22% Similarity=0.300 Sum_probs=168.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGEM 210 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 210 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2467999999864 68888
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|+++|+.|.....+.. . .+....++.+++.+|+.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------Y------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 011224567889999987666554
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999986533445 4446677777765 9999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988774
No 322
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=329.14 Aligned_cols=204 Identities=27% Similarity=0.386 Sum_probs=169.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-----ccceEEEEccCCC-CCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDV-HIG 208 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 208 (1425)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999998 999999999874211 2467999999852 445
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
..||+||+.++....+. .+ .+....+..+++.+||++..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL----------SK------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCC----------CH------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 67999999875321110 00 0112245678999999877776654
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999865 3 4555667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998875
No 323
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=324.59 Aligned_cols=200 Identities=22% Similarity=0.369 Sum_probs=166.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 211 (1425)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999998 999999998875432 2467999999877665 69
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccccCccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTMVGDEML 290 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~ 290 (1425)
|+||+.++....+ . ....++.+++.+||+ +..++. +
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRD-----V 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 9999987532110 0 011245678889996 344443 4
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
..|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+..+. +|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNL-TVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccHHHHHHhCCEEEEEeCC
Confidence 569999999999999999999999999999999999999999999998654344 4555788888999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 324
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.58 Aligned_cols=203 Identities=26% Similarity=0.396 Sum_probs=169.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC----ccceEEEEccCCC-CCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV----PQRTAAYISQHDV-HIGE 209 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~~ 209 (1425)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4999999999999999999999999999999999999998 999999999876432 2357999999864 4677
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
.||+||+.++....+.. ..+....++++++.+||++..++.++
T Consensus 93 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 135 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRSPK--- 135 (274)
T ss_pred chHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCcc---
Confidence 89999999865322110 00112346678899999887776554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++ ..+|+|++|++
T Consensus 136 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 136 --TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 3 44555567777777 56999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 325
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=327.07 Aligned_cols=206 Identities=20% Similarity=0.290 Sum_probs=165.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999998620 1289999999886421 1246799999987776
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD----VCADT 283 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t 283 (1425)
.+||+||+.++....+... ..+....++..++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKD---------------------------------KKKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4899999998643221000 001122345667777763 33444
Q ss_pred cccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCe
Q 047682 284 MVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDD 363 (1425)
Q Consensus 284 ~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 363 (1425)
. ++.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++.+ + ++++.++|+..++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999999843 4 4555578888889999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 047682 364 IILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 364 vilL~~G~iv~~G~~~~~~ 382 (1425)
+++|++|+++.+|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988874
No 326
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=327.39 Aligned_cols=206 Identities=18% Similarity=0.301 Sum_probs=166.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987510 1289999999887532 124579999998777
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD----VCAD 282 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~ 282 (1425)
++ +||+||+.|+.+..+.. . .+....++++++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------K------------------------KDLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 89999999864322110 0 00112356678888884 2334
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
+. ++.|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 150 ~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 SP-----ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 33 456999999999999999999999999999999999999999999999843 4 455557888889999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 047682 363 DIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 363 ~vilL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 327
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.1e-34 Score=336.52 Aligned_cols=225 Identities=20% Similarity=0.280 Sum_probs=182.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-eEEEEEEEcCcc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKISGYP 904 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~~~G~i~i~g~~ 904 (1425)
-++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47888988776421 12356999999999999999999999999999999999976532 237999999987
Q ss_pred CCc---cc---cc-ceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 047682 905 KKQ---ET---FA-RISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG 975 (1425)
Q Consensus 905 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 975 (1425)
+.. .. ++ +.++|++|++ .+.|.+|+.+++.+...... ..+.++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 542 11 22 4799999998 67899999999977654332 234455566788999999997533221 1 22
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+.+||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 46778999999986
Q ss_pred CcEEEEECCCC
Q 047682 1055 GGYEIYVGPLG 1065 (1425)
Q Consensus 1055 Gg~~~y~G~~~ 1065 (1425)
|+++..|+..
T Consensus 238 -G~ive~g~~~ 247 (330)
T PRK09473 238 -GRTMEYGNAR 247 (330)
T ss_pred -CEEEEECCHH
Confidence 6899999863
No 328
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=334.42 Aligned_cols=219 Identities=19% Similarity=0.295 Sum_probs=176.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++.. ......+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKK--------TPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCC--------CccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 47889998877310 0001359999999999999999999999999999999999765 3479999999875
Q ss_pred C--------cccccceEEEeecCCCC-CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCC
Q 047682 906 K--------QETFARISGYCEQNDIH-SPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPG 975 (1425)
Q Consensus 906 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 975 (1425)
. ....++.++|++|++.. ....|++||+.|....+ ....+...+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999732 23469999998864322 223344445678899999994 555554
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 57889999999996
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 678888875
No 329
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=329.52 Aligned_cols=206 Identities=32% Similarity=0.489 Sum_probs=171.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999998 9999999988754322 35699999998887889
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.++....+. . . ++....++.+++.+||++..++.++
T Consensus 92 tv~e~l~~~~~~~~~-~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGL-S---------R------------------------AEDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCC-C---------c------------------------HHHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 999999885321110 0 0 0012235678899999876666554
Q ss_pred ccCChhhhhhHHHHHHHh------cCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 291 RGISGGQRKRVTTGEMLV------GPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~------~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
.|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++.+..+. +|+.++|+..++.+++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGL-AVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEECCHHHHHHhcCEE
Confidence 59999999999999999 599999999999999999999999999998744444 5555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 330
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9.1e-35 Score=333.91 Aligned_cols=235 Identities=28% Similarity=0.451 Sum_probs=193.1
Q ss_pred hcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccccCccccceeeeceEEEEeCCeEEEEEcCCC
Q 047682 78 RVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHILPSRKKKFTILKDVNGIVKPSRLTLLLGPPA 157 (1425)
Q Consensus 78 ~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 157 (1425)
+..++-|+..++.|++++-. ...++++|+|+||.+.+|+-++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~P--------------------------------Pg~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTAAP--------------------------------PGQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeeecC--------------------------------CCCCCcceecceeEecCCceEEEECCCC
Confidence 45567788889999988721 1234679999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc---ceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhH
Q 047682 158 SGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ---RTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVE 234 (1425)
Q Consensus 158 sGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 234 (1425)
||||||.|+|.|..+|. +|.|.+||.+++..+.. +.|||.||+ ..++..||.|||. |+
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQd-VeLF~GTIaeNIa---Rf------------ 433 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQD-VELFDGTIAENIA---RF------------ 433 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCccc-ceecCCcHHHHHH---hc------------
Confidence 99999999999999998 99999999999877653 889999995 5555679999996 22
Q ss_pred hhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEe
Q 047682 235 LSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALAL 314 (1425)
Q Consensus 235 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~il 314 (1425)
.++.|.+.+.+|+...+ ..|- ++.|++.+||.||+.+. +||||||||+++||||+++|.++
T Consensus 434 ----------~~~~d~~kIieAA~lAg-----vHel---Il~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 434 ----------GEEADPEKVIEAARLAG-----VHEL---ILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred ----------cccCCHHHHHHHHHHcC-----hHHH---HHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCcEE
Confidence 12344455555543322 2233 36799999999998665 69999999999999999999999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecChhHHHHHH
Q 047682 315 FMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGPREHVLEFF 385 (1425)
Q Consensus 315 lLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F 385 (1425)
+||||-|.||++.+..+.+.+.+... .|+|+|++ .|++.+...+|+|++|++|++-.+|+++|++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvi--aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVI--AHRPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEE--ecCHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999998754 46666663 4456799999999999999999999999998754
No 331
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=331.29 Aligned_cols=208 Identities=23% Similarity=0.332 Sum_probs=169.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGEM 210 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 210 (1425)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4899999999999999999999999999999999999987212399999999886432 2357999999863 67789
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.|..+..+.. .++....++.+++.+||++..++.+
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998864322110 0111234677899999987666554
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+.| |+.++|+..++ ..||++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999987543445 44466777777 589999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 332
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.7e-34 Score=343.01 Aligned_cols=199 Identities=24% Similarity=0.422 Sum_probs=170.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-------CccceEEEEccCCCCCCCCC
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-------VPQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 211 (1425)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999998 99999999987532 12467999999999999999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.|+.+... . .+....++++++.+||++..++.+ +
T Consensus 92 v~enl~~~~~~~~------------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------P------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC------------h------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998643110 0 001224567899999988777655 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++.+..+. +++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~-tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGI-PILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 59999999999999999999999999999999999999999999998764444 45557888889999999999999999
Q ss_pred EEEecChhHHH
Q 047682 372 IVFQGPREHVL 382 (1425)
Q Consensus 372 iv~~G~~~~~~ 382 (1425)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988874
No 333
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.61 Aligned_cols=218 Identities=21% Similarity=0.291 Sum_probs=179.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecc
Confidence 77889888774110 0012469999999999999999999999999999999999765 35799999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 Q----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
. ...++.+||++|++. .+...||.|++.|..... .....+.++.++++++.+||.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 3 234567999999974 233469999998865422 2334455567899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999997 354 4999999987 67888
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 225 ~g~~ 228 (280)
T PRK13633 225 EGTP 228 (280)
T ss_pred ecCH
Confidence 8875
No 334
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2e-34 Score=323.59 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=162.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCC--CC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHD--VH 206 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 206 (1425)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876533 246799999987 46
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTMV 285 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~v 285 (1425)
++.+||+||+.+.....+... .+ .......+.+++.++|. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~----------~~----------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLS----------KK----------------------EARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCc----------HH----------------------HHHHHHHHHHHHHCCCChhHhhCCc
Confidence 678999999988643221100 00 00011124678888985 4455444
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++..++ +|+.++|+.+++.+++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGL-TLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEE
Confidence 459999999999999999999999999999999999999999999998754344 45557788888888999999
Q ss_pred EEcCCeEEEec
Q 047682 366 LISEGQIVFQG 376 (1425)
Q Consensus 366 lL~~G~iv~~G 376 (1425)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 335
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=336.07 Aligned_cols=211 Identities=20% Similarity=0.302 Sum_probs=169.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
.++|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|+++.
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 01289999999998632 235679999998776
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
+ +.||+||+.|+....+.. .. +..+..++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~----------~~-----------------------~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIN----------DR-----------------------KILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCC----------hH-----------------------HHHHHHHHHHHHHcCCcchhhhhhh
Confidence 6 589999999864322100 00 0011224556777777655455665
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+ ....|||||||||+||||++.+|+|++|||||+|||+.+...+.+.|+++.+ + .++++++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4557999999999999999999999999999999999999999999998854 3 4566678888889999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999884
No 336
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-34 Score=366.77 Aligned_cols=206 Identities=26% Similarity=0.428 Sum_probs=165.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+| +.|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLF-SAT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhh-ccc
Confidence 5899999999999999999999999999999999999998 9999999999887654 46799999976655 569
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++||+.++.. +.+.+++.+++...+ .+..+ -. ++..||.+|+.+.
T Consensus 430 i~~Ni~~~~~-------------------------~~~~~~i~~al~~~~------l~~~i--~~-p~GldT~vge~g~- 474 (574)
T PRK11160 430 LRDNLLLAAP-------------------------NASDEALIEVLQQVG------LEKLL--ED-DKGLNAWLGEGGR- 474 (574)
T ss_pred HHHHhhcCCC-------------------------ccCHHHHHHHHHHcC------CHHHH--cC-ccccCchhcCCCC-
Confidence 9999998631 111111222211111 01111 12 5678999998654
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||||++++|++++|||||++||+.++..|.+.|+++.+ ++|+|++ +|..+ ....+|+|++|++|+
T Consensus 475 ~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tviii-tHr~~-~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 475 QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLMI-THRLT-GLEQFDRICVMDNGQ 550 (574)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEEE-ecChh-HHHhCCEEEEEeCCe
Confidence 6999999999999999999999999999999999999999999998743 5666664 44444 456799999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+++++++
T Consensus 551 i~~~g~~~~l~~ 562 (574)
T PRK11160 551 IIEQGTHQELLA 562 (574)
T ss_pred EEEeCCHHHHHh
Confidence 999999999864
No 337
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=329.33 Aligned_cols=214 Identities=22% Similarity=0.289 Sum_probs=174.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.++ .+.+|+|+|++|++||+++|+|||||||||||++|+|..+. .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997531 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~--- 151 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES--- 151 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC---
Confidence 87531 234567999999998887 499999988654331 112 23345677888888743 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.+|++++|+
T Consensus 152 --~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 152 --GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5888999999999
Q ss_pred C--------C--cEEEEECCC
Q 047682 1054 R--------G--GYEIYVGPL 1064 (1425)
Q Consensus 1054 ~--------G--g~~~y~G~~ 1064 (1425)
+ | |++++.|++
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 6 3 678888876
No 338
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=325.98 Aligned_cols=209 Identities=26% Similarity=0.350 Sum_probs=173.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 467888887762 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.++|++|++.+++ .|++||+.+....+ . . .++.+.++++.++|. +..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988876 69999997653221 1 1 123567889999996 455543 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57788999999997 57788
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 339
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=322.45 Aligned_cols=199 Identities=29% Similarity=0.390 Sum_probs=170.7
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcc-cccceEEEeecCCCCCCCCCHHHH
Q 047682 854 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQE-TFARISGYCEQNDIHSPNVTVYES 932 (1425)
Q Consensus 854 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 932 (1425)
+|+|+|++|+|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999765 3579999999876431 234578999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 047682 933 LLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1012 (1425)
Q Consensus 933 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~ 1012 (1425)
+.+..... .....+.++.+.++++.++|.+..+..+ ..||||||||++||++|+++|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764322 2233444456788999999988777663 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1013 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1013 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 899999999986 57788999999986 678888875
No 340
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.4e-34 Score=376.11 Aligned_cols=207 Identities=25% Similarity=0.375 Sum_probs=167.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||+++++... ++.++||+|++.+| +.|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIF-SGS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceeh-hHH
Confidence 4899999999999999999999999999999999999998 9999999999877654 57899999977665 569
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+|||.++.+ |+.+.+.+.+++...+ .++.+ -.++...||.||+.+ .
T Consensus 564 I~eNi~l~~~------------------------~~~~~~~i~~a~~~a~------l~~~i--~~lp~gldt~i~e~G-~ 610 (708)
T TIGR01193 564 ILENLLLGAK------------------------ENVSQDEIWAACEIAE------IKDDI--ENMPLGYQTELSEEG-S 610 (708)
T ss_pred HHHHHhccCC------------------------CCCCHHHHHHHHHHhC------CHHHH--HhcccccCcEecCCC-C
Confidence 9999998631 1111222222222111 11112 246778899999865 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
+||||||||++||||++++|++++||||||+||+.++..+.+.|+++ .++|+|+ ++|.. ++.+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999874 2566655 45554 4668899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++++|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999999875
No 341
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=324.73 Aligned_cols=203 Identities=25% Similarity=0.328 Sum_probs=168.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCC------C---CccceEEEEccCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDE------F---VPQRTAAYISQHDV 205 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 205 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999998 9999999987631 1 12357999999988
Q ss_pred CCCCCCHHHHHHhhh-hhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 206 HIGEMTVRETLAFSA-RCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
+++.+||+||+.+.. ...+.. . .+....++..++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 999999999997532 111100 0 01122456788999998766655
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ +.|||||||||+||||++.+|++++|||||+|||..++..+.+.|+++.+ .+ ++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998854 34 45555788888998999999
Q ss_pred EEEcCCeEEEecChhHH
Q 047682 365 ILISEGQIVFQGPREHV 381 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~ 381 (1425)
++|++|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999988764
No 342
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5e-34 Score=320.15 Aligned_cols=197 Identities=25% Similarity=0.332 Sum_probs=162.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999998 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.+.....+.. ..+....++.+++.+||.+..+..++
T Consensus 101 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~- 145 (228)
T PRK10584 101 PTLNALENVELPALLRGES----------------------------------SRQSRNGAKALLEQLGLGKRLDHLPA- 145 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhCChh-
Confidence 9999999998864321100 00112345678899999876665554
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|+ ++|+..++ +.+|++++|
T Consensus 146 ----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 146 ----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIL-VTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEE-EecCHHHH-HhCCEEEEE
Confidence 599999999999999999999999999999999999999999999986544455554 66777666 559999999
Q ss_pred cCCeEEEe
Q 047682 368 SEGQIVFQ 375 (1425)
Q Consensus 368 ~~G~iv~~ 375 (1425)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 343
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.00 Aligned_cols=211 Identities=23% Similarity=0.290 Sum_probs=174.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ + + ..|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~-~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYH------------H-L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEEC------------C-c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 56788887763 1 1 138999999999999999999999999999999765 35799999998754
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 907 QE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 907 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.++|.+..+..+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 22457899999999999999999998653211 111 1233456889999999988777764 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999996 688898875
No 344
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-34 Score=292.73 Aligned_cols=205 Identities=24% Similarity=0.376 Sum_probs=177.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||++++- +...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 9999999998764 334568999999999999999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||++|+.++.|.++. +....+.+.+...||++..+..+ -.|
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~~~i-----~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEHKYI-----WQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCcccccccce-----Eee
Confidence 999999998886432 11234567889999998766544 569
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc--CCe
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS--EGQ 371 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 371 (1425)
||||||||.|||||..+|+.|+||||+++||.-|+.++.+.|-++.+..++.+. .++|+.+|..-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~l-liTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVL-LITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEE-EEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999998887665554 47999999999999999998 489
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
|+..=+.+-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998766664433
No 345
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.7e-34 Score=325.34 Aligned_cols=212 Identities=23% Similarity=0.366 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++..... ..+...... ...+....++++++.+|+++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 999999998643110 000000000 000112346778999999877666554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ++ +|+.++|+.+++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KH-SVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CC-EEEEEECCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999854 44 555578888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 346
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=328.59 Aligned_cols=210 Identities=22% Similarity=0.338 Sum_probs=171.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 35999999999999999999999999999999999999998 999999998875432 235799999988888999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||.||+.++..... .... .. . ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~--~~~~--------------~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH--GALG--------------RF-G-------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc--cccc--------------CC-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 0000 00 0 0012245678899999876666654
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+ ++|+.++|+.+++.+.+|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999865434 44555788888999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987763
No 347
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.8e-34 Score=373.48 Aligned_cols=206 Identities=25% Similarity=0.408 Sum_probs=163.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.++ +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 35899999999999999999999999999999999999998 9999999999887653 47899999976655 67
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|+||||.++.. +.+.+++.+++...+. +..++ .|++..||.+|+.+
T Consensus 570 TIreNI~~g~~-------------------------~~~~e~i~~al~~a~l------~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLT-------------------------DTPDEEIMAAAKAANA------HDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCC-------------------------CCCHHHHHHHHHHcCC------HHHHH--hCCCccCCcccCCC-
Confidence 99999998632 1111222222211111 11222 35677899999865
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
..||||||||++||||++++|+|++||||||+||+.++..+.+ ... ..++|+|+ ++|.. +..+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999998887 221 23455555 55555 456789999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+|+++|+++++++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999875
No 348
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8e-35 Score=337.99 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=175.8
Q ss_pred CceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCc
Q 047682 824 PLSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGY 903 (1425)
Q Consensus 824 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~ 903 (1425)
+-+++|+||++++. +++++|+++||+|++||.+||+|+|||||||++|+|.+... .+|+|.|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34699999999884 34569999999999999999999999999999999998654 4799999999
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCC
Q 047682 904 PKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGL 973 (1425)
Q Consensus 904 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 973 (1425)
++++ +..|+.+||||||..+|. -||.+|+.|+. ++.+.++ |-++.+..++.+. .++.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8653 567889999999988775 59999999863 3444443 4455566666543 3445665
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
.| ..|||||||||+|||+++.||+|+++|||||.||+.+...+++.+++.. .|+|+|++.|+. ++...||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM-SGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc-CCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 53 4699999999999999999999999999999999999999999999843 589999999997 5788999999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |.+...|+-
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 8 567787875
No 349
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=324.97 Aligned_cols=207 Identities=22% Similarity=0.317 Sum_probs=165.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcccEEEECCccCCCC-----CccceEEEEccCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD-----PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHD 204 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 204 (1425)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 58999999999999999999999999999999999864 34 89999999987532 1246799999988
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+++ .||+||+.++....+...+ ......++..++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987533211000 00122355677888885422112
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. ++..+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ + .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCCEE
Confidence 2 234557999999999999999999999999999999999999999999999843 4 45555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 350
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.3e-34 Score=312.65 Aligned_cols=190 Identities=49% Similarity=0.843 Sum_probs=161.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCC--CCceEEEEEEEcCc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNIKISGY 903 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~--~~~~~~G~i~i~g~ 903 (1425)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 478889988774210 001246999999999999999999999999999999999976 4 45899999998
Q ss_pred cCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHH
Q 047682 904 PKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQ 983 (1425)
Q Consensus 904 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 983 (1425)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8654445677999999998899999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 984 rqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986557788999999997 5776654
No 351
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=325.39 Aligned_cols=215 Identities=27% Similarity=0.296 Sum_probs=174.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 378899888763 2469999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ..+++.++|++|+..+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 234567999999988877 899999987653321 1122333456788899988753 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5788999999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 7 678888875
No 352
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.6e-34 Score=322.58 Aligned_cols=204 Identities=24% Similarity=0.322 Sum_probs=167.4
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcccEEEECCccCCCCCc-cceEEEEccCCC--CCC
Q 047682 136 ILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP----SLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDV--HIG 208 (1425)
Q Consensus 136 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 208 (1425)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 9999999998765433 257999999864 556
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc---cccccc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV---CADTMV 285 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~v 285 (1425)
.+|+.|++.+.....+.. . .+....++++++.+||++ ..+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLKK-- 121 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHhC--
Confidence 789999998754321100 0 011234667899999973 3333
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
.+..|||||||||+||+|++.+|++++|||||+|||..+...+.+.|+++.+.. +++|+.++|+.+++..++|+++
T Consensus 122 ---~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 122 ---YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLF-GTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred ---ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 345699999999999999999999999999999999999999999999986533 4455557888889999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|+++..|+.+++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 353
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.16 Aligned_cols=221 Identities=22% Similarity=0.297 Sum_probs=173.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 209 (1425)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.++++
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765332 2358999999999999
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++........ ....... .+... ....+....++..++.+||++..++.+
T Consensus 95 ~tv~enl~~~~~~~~~~~---~~~~~~~-------~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKTG---LFSGLLK-------TPAFR---------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccch---hhhhhcc-------ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 999999998643110000 0000000 00000 000011234567889999987666555
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+..+ ++|+.++|+..++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHN-VTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 45999999999999999999999999999999999999999999999865334 4555578888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 354
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.4e-34 Score=328.43 Aligned_cols=207 Identities=24% Similarity=0.324 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCC--C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHD--V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 205 (1425)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 999999999876532 235699999985 4
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
+.+.+||+||+.+....... .. ..+....++++++.+||+ ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS---------LD------------------------ESEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC---------CC------------------------HHHHHHHHHHHHHHcCCChhhhhCC
Confidence 66789999999875421100 00 001123456788999996 555554
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+...+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFG-TAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHHhcEE
Confidence 4 46999999999999999999999999999999999999999999999875434 45555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999998874
No 355
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=326.46 Aligned_cols=219 Identities=20% Similarity=0.251 Sum_probs=175.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 378899988763 2469999999999999999999999999999999999653 11 1479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++.++.++++++.+++.+....... ....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87532 2345679999999888875 99999987643321 11233444567888999988542111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999986 57789999999986 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 8888875
No 356
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2e-34 Score=321.87 Aligned_cols=196 Identities=22% Similarity=0.332 Sum_probs=164.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC------ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 35999999999999999999999999999999999999998 999999999876432 235799999998888
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.+.....+.. .++....++..++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGAS----------------------------------GDDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCc--
Confidence 9999999999864322110 0011223566788999987666544
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+ . +++++.++|+.+++.+.+|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999864 2 455666788888999999999999
Q ss_pred cCCeEE
Q 047682 368 SEGQIV 373 (1425)
Q Consensus 368 ~~G~iv 373 (1425)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 357
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=335.67 Aligned_cols=225 Identities=16% Similarity=0.210 Sum_probs=177.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--ceEEEEEEEcCcc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNIKISGYP 904 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~--~~~~G~i~i~g~~ 904 (1425)
++++|+++.+... .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888777421 1235699999999999999999999999999999999997542 2357999999987
Q ss_pred CCc---cc----ccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCC---CCHHHHHHHHHHHHHHcCCccccccccC
Q 047682 905 KKQ---ET----FARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPD---VDSETRRMFLEEIMELVELNPLRQSLVG 972 (1425)
Q Consensus 905 ~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~~g 972 (1425)
+.. .. .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+..+..
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~-- 152 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAM-- 152 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHH--
Confidence 532 11 1346999999975 5788999999976422110000 11223456688999999997532211
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEE
Q 047682 973 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1051 (1425)
Q Consensus 973 ~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~ 1051 (1425)
...+..|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|++++
T Consensus 153 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~v 231 (330)
T PRK15093 153 RSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINV 231 (330)
T ss_pred hCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEE
Confidence 1124579999999999999999999999999999999999999999999999874 899999999986 57789999999
Q ss_pred EeCCcEEEEECCC
Q 047682 1052 MKRGGYEIYVGPL 1064 (1425)
Q Consensus 1052 l~~Gg~~~y~G~~ 1064 (1425)
|.+ |+++..|+.
T Consensus 232 m~~-G~ive~g~~ 243 (330)
T PRK15093 232 LYC-GQTVETAPS 243 (330)
T ss_pred EEC-CEEEEECCH
Confidence 986 789999986
No 358
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=324.65 Aligned_cols=215 Identities=21% Similarity=0.230 Sum_probs=175.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367888887663 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ .|++||+.|...... .....+.++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87532 123567999999998887 899999987654321 1123344456788999998853 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 689999999986 5788899999998
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 6 678888886
No 359
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.3e-34 Score=322.80 Aligned_cols=202 Identities=28% Similarity=0.350 Sum_probs=166.5
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHH
Q 047682 137 LKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETL 216 (1425)
Q Consensus 137 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 216 (1425)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999999998 9999999998765432 358999998889999999999
Q ss_pred HhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChh
Q 047682 217 AFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGG 296 (1425)
Q Consensus 217 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 296 (1425)
.++..... .. ... .+....++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~-~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVL-PD-------LSK------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcc-cC-------CCH------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 88532100 00 000 0112245678899999877666554 59999
Q ss_pred hhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEec
Q 047682 297 QRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQG 376 (1425)
Q Consensus 297 qrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 376 (1425)
|||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+..++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRV-TVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998764444 4555788888999999999999999999988
Q ss_pred ChhHH
Q 047682 377 PREHV 381 (1425)
Q Consensus 377 ~~~~~ 381 (1425)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 360
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=325.09 Aligned_cols=219 Identities=19% Similarity=0.249 Sum_probs=173.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcCc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISGY 903 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g~ 903 (1425)
-+++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35667776552 2469999999999999999999999999999999999753 11 25899999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 904 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 904 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
+... ...++.++|++|++.+++. |+.||+.+....+. ........++.++++++.+++.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999888875 99999987643321 1112233445678899999986522111111 2457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999997 688
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 888875
No 361
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=340.08 Aligned_cols=190 Identities=24% Similarity=0.377 Sum_probs=166.3
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 047682 857 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 857 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999765 348999999977532 1235679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+||+.|... ...++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 11234578999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 68889999999997 688898886
No 362
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-34 Score=319.52 Aligned_cols=194 Identities=27% Similarity=0.428 Sum_probs=160.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 209 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.+.. .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999998 999999999876432 2367999999864 4678
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 99999998864321100 0 011223567888999987666554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++++.++|+.+++.++||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 459999999999999999999999999999999999999999999998653 44566678888899999999999999
Q ss_pred Ce
Q 047682 370 GQ 371 (1425)
Q Consensus 370 G~ 371 (1425)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 363
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.5e-34 Score=340.26 Aligned_cols=194 Identities=25% Similarity=0.381 Sum_probs=168.4
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 047682 857 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 857 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999765 347999999987532 1235679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+||+.|+.... ...+.++.++++++.++|.+..+.. +..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 1233445688999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999865 899999999996 57888999999997 688898875
No 364
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.7e-34 Score=328.26 Aligned_cols=223 Identities=20% Similarity=0.253 Sum_probs=178.5
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++.+.. +...+.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 788999887742100 000012469999999999999999999999999999999999865 35799999998754
Q ss_pred c---ccccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCC
Q 047682 907 Q---ETFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lS 980 (1425)
. ...++.++|++|++. +.+.+|+.|++.+...... ........+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 122356899999875 5678899999987654331 223334445678999999994 455544 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57778999999986 6778
Q ss_pred EECCC
Q 047682 1060 YVGPL 1064 (1425)
Q Consensus 1060 y~G~~ 1064 (1425)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88875
No 365
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=324.97 Aligned_cols=212 Identities=20% Similarity=0.321 Sum_probs=168.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCC--C---CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDE--F---VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|+++|+++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999999762 1138999999998752 1 1245799999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++....+.... ..+....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhhh-c
Confidence 999999999986532211000 0011123566788888743211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+..+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34456999999999999999999999999999999999999999999999853 4 45555788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 366
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-34 Score=317.74 Aligned_cols=191 Identities=25% Similarity=0.375 Sum_probs=162.3
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 047682 857 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 857 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999765 347999999976531 1235679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+||+.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233445678899999998766654 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|+.+++.+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 57788999999997 5776654
No 367
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=329.29 Aligned_cols=205 Identities=28% Similarity=0.382 Sum_probs=168.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-----CccceEEEEccCCC-CC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDV-HI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~ 207 (1425)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999998 99999999987421 12357999999864 34
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+..|+.||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------E------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 5678999998864322110 0 011223567888999987766655
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 45999999999999999999999999999999999999999999999864 34 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 368
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=325.64 Aligned_cols=221 Identities=21% Similarity=0.254 Sum_probs=177.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
.++++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988763 235999999999999999999999999999999999975431 2369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|+..+++ .|+.||+.+...... .....+.++.+.++++.+++.+..+..... .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87521 234567999999988887 899999987643221 112233345678899999985422211111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCC-
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1055 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~G- 1055 (1425)
.||||||||++||++|+++|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999996 588899999999974
Q ss_pred ---cEEEEECCC
Q 047682 1056 ---GYEIYVGPL 1064 (1425)
Q Consensus 1056 ---g~~~y~G~~ 1064 (1425)
|+++++|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 788999986
No 369
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=323.94 Aligned_cols=215 Identities=22% Similarity=0.286 Sum_probs=174.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887763 23699999999999999999999999999999999996431 12479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87542 134567899999988887 899999988654321 1123344566788888888753 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999854 899999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 7 678888875
No 370
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-34 Score=321.14 Aligned_cols=206 Identities=27% Similarity=0.370 Sum_probs=173.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-ccceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-PQRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+.. .++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999998 999999999876533 24679999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.++....+.. .......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLP----------------------------------KAEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99998864432110 0011224567889999987776655 46
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+..+.|+++ ++|+..++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii-~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVF-VTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543445544 67888889999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 371
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=334.72 Aligned_cols=217 Identities=16% Similarity=0.167 Sum_probs=171.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcccEEEECCccCCCCCc-------cceEEEEccCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL-KLSGRVTYNGHNMDEFVP-------QRTAAYISQHDV 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 205 (1425)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 469999999999999999999999999999999999986311 128999999998765432 246999999864
Q ss_pred --CCCCCCHHHHHHhhhhhcCC-CCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 047682 206 --HIGEMTVRETLAFSARCQGV-GSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCAD 282 (1425)
Q Consensus 206 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 282 (1425)
+.+.+||.+++.+....... +.++ .. ..+....+.++++.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999864221100 0000 00 0011234677899999975321
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
+-++.+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +++++.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1134456799999999999999999999999999999999999999999999987644 4556668999999999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 047682 363 DIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 363 ~vilL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998874
No 372
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=327.13 Aligned_cols=210 Identities=23% Similarity=0.380 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 35999999999999999999999999999999999999998 9999999998754332 35699999998888899
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+||+.++..-.. ... ... .......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (265)
T PRK10253 97 TVQELVARGRYPHQ--PLF----------------TRW------------RKEDEEAVTKAMQATGITHLADQSV----- 141 (265)
T ss_pred cHHHHHHhCccccc--ccc----------------cCC------------CHHHHHHHHHHHHHcCCHHHhcCCc-----
Confidence 99999987521000 000 000 0001224567889999987666554
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.+++|++++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~-~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKG-YTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999865334 45555788888999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 373
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=323.89 Aligned_cols=218 Identities=23% Similarity=0.301 Sum_probs=174.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcCc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISGY 903 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g~ 903 (1425)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887662 246999999999999999999999999999999999975421 25799999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 904 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 904 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+... ...+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhh
Confidence 7532 134567999999998887 899999987653321 1122334455788889988864211111 112467
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 57888999999997 577
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888875
No 374
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.4e-34 Score=320.29 Aligned_cols=206 Identities=29% Similarity=0.445 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 212 (1425)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 35999999999999999999999999999999999999988 9999999998765333 3679999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.+..+..+.. . ......++++++.+++....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------K------------------------AKIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 99998864422100 0 001123467888899976666554 45
Q ss_pred CChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeE
Q 047682 293 ISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQI 372 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 372 (1425)
||||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+..++|+++ ++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli-~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVF-VTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533445544 67777888999999999999999
Q ss_pred EEecChhHHH
Q 047682 373 VFQGPREHVL 382 (1425)
Q Consensus 373 v~~G~~~~~~ 382 (1425)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988774
No 375
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.5e-34 Score=320.22 Aligned_cols=197 Identities=25% Similarity=0.334 Sum_probs=167.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 213 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 213 (1425)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999998 999999998775432 35799999998888899999
Q ss_pred HHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 047682 214 ETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGI 293 (1425)
Q Consensus 214 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 293 (1425)
||+.+.....+. .+..++.+++.+||++..|..+ +.|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 999876432110 0112456788899987666554 459
Q ss_pred ChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEE
Q 047682 294 SGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIV 373 (1425)
Q Consensus 294 SGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 373 (1425)
|||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.+ .+. +|+.++|+..++.+.+|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~-tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGI-TVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999864 344 4555778888899999999999999999
Q ss_pred EecChh
Q 047682 374 FQGPRE 379 (1425)
Q Consensus 374 ~~G~~~ 379 (1425)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999864
No 376
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=323.69 Aligned_cols=219 Identities=23% Similarity=0.237 Sum_probs=174.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367888887663 246999999999999999999999999999999999975421 3479999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 903 YPKKQ----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 903 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
.+... ...++.++|++|++.+++ .||.||+.+...... ....+..++.+.++++.+++.+........ ....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999998887 899999987643221 112233345677888888875321111111 1457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 699999999986 57888999999997 688
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 888875
No 377
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=325.03 Aligned_cols=216 Identities=22% Similarity=0.282 Sum_probs=176.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc-e--EEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~-~--~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899987763 246999999999999999999999999999999999975422 1 479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ .|++||+.+....+. ..+..+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654331 1223334456788899998843 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 467999999999999999999999999999999999999999999999865 699999999997 6888999999998
Q ss_pred C----CcEEEEECCC
Q 047682 1054 R----GGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~----Gg~~~y~G~~ 1064 (1425)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4789999986
No 378
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=319.73 Aligned_cols=201 Identities=24% Similarity=0.412 Sum_probs=168.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 217 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 217 (1425)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998765332 357999999988899999999998
Q ss_pred hhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 047682 218 FSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQ 297 (1425)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 297 (1425)
++... ... . . ......++++++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~--~------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--L------N-------------------------AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--C------C-------------------------HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 0 0 0012245678899999877776654 599999
Q ss_pred hhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEecC
Q 047682 298 RKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQGP 377 (1425)
Q Consensus 298 rqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 377 (1425)
||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+..+.| ++.++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~t-iii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLT-LLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999986644444 5557888889999999999999999999999
Q ss_pred hhHHH
Q 047682 378 REHVL 382 (1425)
Q Consensus 378 ~~~~~ 382 (1425)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88775
No 379
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-34 Score=330.48 Aligned_cols=205 Identities=19% Similarity=0.304 Sum_probs=166.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCC----C----CccceEEEEccCCC-
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDE----F----VPQRTAAYISQHDV- 205 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 205 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4899999999999999999999999999999999999998 9999999988642 1 12457999999863
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
.+...||+||+.|+....+.. . .+....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN----------K------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 234569999999864321100 0 01112356678889995 455544
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+ +.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.++||++
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYK-KRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999875434 45555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 380
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=333.15 Aligned_cols=220 Identities=19% Similarity=0.243 Sum_probs=178.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.+.. +.+.+|+|+|++|++||++||+|||||||||||++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5899999987741 224699999999999999999999999999999999997531 23579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCC-HHHHHHHHHHHHHHcCCccccccccCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVD-SETRRMFLEEIMELVELNPLRQSLVGLPGV 976 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~-~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 976 (1425)
.++.. ...++.++||+|++.+++ .|++||+.|..... ..+ .+..++.++++++.++|.+-.++.++.. .
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 98642 234667999999998874 79999999864321 122 2223345678888888854333333332 5
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|+|++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999986 47778999999996 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
+++..|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 88999986
No 381
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=325.38 Aligned_cols=209 Identities=25% Similarity=0.382 Sum_probs=170.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999988 999999998765432 235699999998888889
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||.||+.++..-.. ..+ ... .......++++++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW----------------GRL------------SAEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhc----------------cCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999998631000 000 000 0011224567888999987666655
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|+.+++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~-~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QG-KTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHhcCEEEEEECC
Confidence 45999999999999999999999999999999999999999999999864 34 45555788888999999999999999
Q ss_pred eEEEecChhHHH
Q 047682 371 QIVFQGPREHVL 382 (1425)
Q Consensus 371 ~iv~~G~~~~~~ 382 (1425)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987763
No 382
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=325.43 Aligned_cols=213 Identities=22% Similarity=0.312 Sum_probs=169.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCCC---ccceEEEEccCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 208 (1425)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 013899999999875432 2467999999988889
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDE 288 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 288 (1425)
.+||+||+.++.+..+... .. .+....++++++.+||.+..+... +.
T Consensus 96 ~~tv~enl~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~ 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK--------SK------------------------KELQERVRWALEKAQLWDEVKDRL-DA 142 (250)
T ss_pred CCcHHHHHHHHHHhccccC--------CH------------------------HHHHHHHHHHHHHcCCCcchhhhh-cC
Confidence 9999999998643221000 00 011234567888899864211111 23
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+.+|++++|+
T Consensus 143 ~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l~ 219 (250)
T PRK14247 143 PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--D-MTIVLVTHFPQQAARISDYVAFLY 219 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEEEE
Confidence 3456999999999999999999999999999999999999999999999843 4 455667888888899999999999
Q ss_pred CCeEEEecChhHHH
Q 047682 369 EGQIVFQGPREHVL 382 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~ 382 (1425)
+|++++.|+.+++.
T Consensus 220 ~G~i~~~g~~~~~~ 233 (250)
T PRK14247 220 KGQIVEWGPTREVF 233 (250)
T ss_pred CCeEEEECCHHHHH
Confidence 99999999988774
No 383
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=329.00 Aligned_cols=204 Identities=22% Similarity=0.352 Sum_probs=166.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCCC-C
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHDV-H 206 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~-~ 206 (1425)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 5999999999999999999999999999999999999998 999999999875421 2357999999852 3
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-cccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV-CADTMV 285 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~v 285 (1425)
+...||+||+.+.....+.. . .+....++.+++.+||.. ..+..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFEKNP 143 (280)
T ss_pred hccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCCc
Confidence 44579999998864321100 0 011223567888899963 445444
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+++
T Consensus 144 -----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 144 -----FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEE
Confidence 46999999999999999999999999999999999999999999999864 3 4455557788888999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988774
No 384
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.8e-34 Score=320.29 Aligned_cols=200 Identities=27% Similarity=0.435 Sum_probs=160.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCC--CCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHI--GEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 211 (1425)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999998 9999999987642 346799999986553 3489
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
|+||+.++..... ..++. + ..+....++.+++.+||++..++.++
T Consensus 87 v~e~l~~~~~~~~--~~~~~--------------~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~----- 131 (213)
T cd03235 87 VRDVVLMGLYGHK--GLFRR--------------L--------------SKADKAKVDEALERVGLSELADRQIG----- 131 (213)
T ss_pred HHHHHHhcccccc--ccccC--------------C--------------CHHHHHHHHHHHHHcCCHHHHhCCcc-----
Confidence 9999988542110 00000 0 00112345678899999876666554
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++++.++|+..++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 5999999999999999999999999999999999999999999999865 3 445566788888999999999999886
Q ss_pred EEEec
Q 047682 372 IVFQG 376 (1425)
Q Consensus 372 iv~~G 376 (1425)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 55554
No 385
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.3e-34 Score=324.79 Aligned_cols=208 Identities=28% Similarity=0.434 Sum_probs=171.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.+... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 34699999998778889
Q ss_pred CHHHHHHhhhh-hcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 211 TVRETLAFSAR-CQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 211 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
||+||+.++.. .... + . .+ ..+....++.+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~~~~---~-------~-------~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 136 (256)
T TIGR03873 91 TVRDVVALGRIPHRSL---W-------A-------GD--------------SPHDAAVVDRALARTELSHLADRDMS--- 136 (256)
T ss_pred CHHHHHHhcchhhhhh---c-------c-------CC--------------CHHHHHHHHHHHHHcCcHhhhcCCcc---
Confidence 99999988521 0000 0 0 00 00112245678889999776666554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ . +++|+.++|+..++.+++|+|++|++
T Consensus 137 --~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 137 --TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred --cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 5999999999999999999999999999999999999999999999864 3 45566678888899999999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|+++..|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999987763
No 386
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-34 Score=286.82 Aligned_cols=197 Identities=27% Similarity=0.402 Sum_probs=168.5
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---c----cccceEEEeecCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---E----TFARISGYCEQNDI 922 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~----~~~~~~gyv~Q~~~ 922 (1425)
....||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++..+ + -..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 457899999999999999999999999999999999997653 58999999988543 1 23467999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEE
Q 047682 923 HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1002 (1425)
Q Consensus 923 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illL 1002 (1425)
+.|++|..||+.....++.... ...++...+.++.+||.+-.+.. +.+|||||+|||+||||++..|+|||-
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999998887774322 22234467889999998766655 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEE
Q 047682 1003 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1059 (1425)
Q Consensus 1003 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~ 1059 (1425)
||||-+||..+...|.+.|-.+.++ |.|.|++||||. +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999888654 999999999985 6788999999997 5654
No 387
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=356.42 Aligned_cols=218 Identities=25% Similarity=0.323 Sum_probs=182.7
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|++++++ ++.+|+|+|++|++||++||+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 77888887763 24699999999999999999999999999999999997653 4799999998753
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 907 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ..++.+||++|++.+++.+||+|++.+....+.. ...+..+.++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245689999999899999999999886432211 11223334456889999999988777664 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|.|||+++|+++ ++.+.+|++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999997 688889
Q ss_pred CCCCC
Q 047682 1062 GPLGR 1066 (1425)
Q Consensus 1062 G~~~~ 1066 (1425)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98754
No 388
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-34 Score=328.14 Aligned_cols=216 Identities=24% Similarity=0.310 Sum_probs=179.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 3788999887631 112359999999999999999999999999999999999765 3579999999875
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 567789999998764322 223444456688999999998877665 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 4 46999999997 57788
Q ss_pred ECCC
Q 047682 1061 VGPL 1064 (1425)
Q Consensus 1061 ~G~~ 1064 (1425)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 389
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=326.29 Aligned_cols=205 Identities=20% Similarity=0.286 Sum_probs=169.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGE 209 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 209 (1425)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999998 999999999876432 2467999999863 6778
Q ss_pred CCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 047682 210 MTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEM 289 (1425)
Q Consensus 210 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 289 (1425)
.||.||+.++....+.. . .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------R------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998764321110 0 011224677888999987666554
Q ss_pred cccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC
Q 047682 290 LRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE 369 (1425)
Q Consensus 290 ~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 369 (1425)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-iil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLT-VLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHH-hCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987543445 555778887775 6999999999
Q ss_pred CeEEEecChhHHH
Q 047682 370 GQIVFQGPREHVL 382 (1425)
Q Consensus 370 G~iv~~G~~~~~~ 382 (1425)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 390
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.27 Aligned_cols=211 Identities=19% Similarity=0.319 Sum_probs=166.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
.+|+|+|++|+||++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5899999999999999999999999999999999998741 01289999999987532 1246799999987777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+. ||+||+.++....+.... + .+....++.+++.+||.+...... +
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 64 999999986543211000 0 011223567888889864211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +. +|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~-tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NY-TIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CC-eEEEEEcCHHHHHhhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999854 44 5555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 391
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=325.79 Aligned_cols=216 Identities=22% Similarity=0.301 Sum_probs=172.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC--------ccceEEEEccCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV--------PQRTAAYISQHDV 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 205 (1425)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|+++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45999999999999999999999999999999999999875223699999998875321 1356999999988
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
+++.+||+||+.++..... . ...... . . ...+.+..++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~~--~--~-------------~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTCF--S--W-------------FTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhhc--c--c-------------ccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987632100 0 000000 0 0 00011234677899999987776655
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+ .|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 599999999999999999999999999999999999999999999987543 4555557888888999999999
Q ss_pred EEcCCeEEEecChhHH
Q 047682 366 LISEGQIVFQGPREHV 381 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~ 381 (1425)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 392
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=324.21 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=165.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|+..++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111289999999887431 1246799999987777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ .||+||+.++........ . .+....++++++.+|+........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------R------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------H------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 6 899999988643211000 0 011224567788888743111111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+....||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999842 4 45566788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 393
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.5e-34 Score=320.68 Aligned_cols=201 Identities=24% Similarity=0.300 Sum_probs=166.0
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc--eEEEEEEEcCccCCcccc-cceEEEeecCCC--CCCCCC
Q 047682 854 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNIKISGYPKKQETF-ARISGYCEQNDI--HSPNVT 928 (1425)
Q Consensus 854 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 928 (1425)
+|+|+|++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976531 158999999987643322 357899999974 557789
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc---cccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 047682 929 VYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN---PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1425)
Q Consensus 929 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~---~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEP 1005 (1425)
+.|++.+...... ...+..++.++++++.+++. +..+.. +..||||||||++||++|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233445688999999997 344443 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1006 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999987 678888875
No 394
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-34 Score=319.91 Aligned_cols=204 Identities=27% Similarity=0.446 Sum_probs=172.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHH
Q 047682 136 ILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRE 214 (1425)
Q Consensus 136 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 214 (1425)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 467999999988898999999
Q ss_pred HHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 047682 215 TLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGIS 294 (1425)
Q Consensus 215 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LS 294 (1425)
|+.++....+.. . .+....++++++.+||.+..++.+. .||
T Consensus 91 ~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------K------------------------KEIERKVLEIAEMLGIDHLLNRKPE-----TLS 131 (235)
T ss_pred HHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHHhcCcc-----cCC
Confidence 998864321100 0 0112235568889999877776654 599
Q ss_pred hhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEE
Q 047682 295 GGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVF 374 (1425)
Q Consensus 295 GGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 374 (1425)
|||||||+||+|++.+|++++|||||+|||..++..+.+.|++++...+.| ++.++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~t-ili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVT-VLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986544444 5556788888999999999999999999
Q ss_pred ecChhHHH
Q 047682 375 QGPREHVL 382 (1425)
Q Consensus 375 ~G~~~~~~ 382 (1425)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 395
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.26 Aligned_cols=216 Identities=25% Similarity=0.276 Sum_probs=174.6
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCce---EEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~---~~G~i~i~g 902 (1425)
-+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788887663 2469999999999999999999999999999999999754322 379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 1345679999999999999999999987643221 1122333455667777777642 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999987 5777899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 7 678888875
No 396
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=6.6e-34 Score=317.20 Aligned_cols=209 Identities=23% Similarity=0.335 Sum_probs=174.0
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++. ..+.+.+|+|+|+++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 567888776531 0112579999999999999999999999999999999999765 35899999998753
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCC
Q 047682 907 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 980 (1425)
. ...++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1245679999999999999999999988654321 123444556789999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++|
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~g 217 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999876 4899999999985 45789999999874
No 397
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=303.17 Aligned_cols=213 Identities=21% Similarity=0.336 Sum_probs=188.4
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCccceEEEEccCCCCC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHI 207 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~ 207 (1425)
+++.+++.+++|+||.++||+|.+++|||||||||.+++|+|+++|+ +|+|+++|.+++... ..+|||.|.+.-++
T Consensus 9 tK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy 84 (300)
T COG4152 9 TKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLY 84 (300)
T ss_pred hhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccC
Confidence 34456778999999999999999999999999999999999999998 999999999886543 35799999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||.|.|.|-|+++|+.. ++.....+..|+.+++......+|
T Consensus 85 ~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~kI-- 128 (300)
T COG4152 85 PKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTKKI-- 128 (300)
T ss_pred ccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccchH--
Confidence 99999999999999988632 223445778999999988776555
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..||-|.+|++-+-.+++++|++++||||+||||+.++..+-+.+.++.. .+++|+..+|.++.+.++||++++|
T Consensus 129 ---k~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL 203 (300)
T COG4152 129 ---KELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLML 203 (300)
T ss_pred ---HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhhee
Confidence 46999999999999999999999999999999999999999999999865 3566666789999999999999999
Q ss_pred cCCeEEEecChhHHHHHH
Q 047682 368 SEGQIVFQGPREHVLEFF 385 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~~~F 385 (1425)
++|+.|.+|+.+++..-|
T Consensus 204 ~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 204 KKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCceEEeccHHHHHHhc
Confidence 999999999999998744
No 398
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-34 Score=316.34 Aligned_cols=195 Identities=23% Similarity=0.359 Sum_probs=163.4
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 217 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 217 (1425)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999998765432 367999999988888999999998
Q ss_pred hhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhh
Q 047682 218 FSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQ 297 (1425)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 297 (1425)
++...... . . .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~-~--------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-L--------T-------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccC-c--------c-------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 75321100 0 0 001224567899999987776655 4699999
Q ss_pred hhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEEec
Q 047682 298 RKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVFQG 376 (1425)
Q Consensus 298 rqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 376 (1425)
|||++||+||+.+|++++|||||+|||..++..+.+.|+++++..+ .+|+.++|+..++.++||++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETK-MTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999999865434 44555788898999999999999999998764
No 399
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=324.82 Aligned_cols=219 Identities=22% Similarity=0.256 Sum_probs=176.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 488999988763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ..+++.++|++|++.+++. |++||+.+....+. ....+..++.++++++.+++.+........ .+.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Ccc
Confidence 87542 1345679999999988876 99999987654321 112223345578888988886421111111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 799999999986 57788999999997 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 8888875
No 400
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=322.28 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++.+. ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 01389999999987532 124579999998777
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++ .||+||+.++.+..+... .++....++++++.++|.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------------------------------KKVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhhh-
Confidence 76 699999998643211000 0011234566788888864322222
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
++.++.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhcCEEEE
Confidence 244567999999999999999999999999999999999999999999998842 4 4556577888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 401
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.6e-34 Score=391.17 Aligned_cols=213 Identities=23% Similarity=0.350 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC---------------------------------------
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--------------------------------------- 174 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 174 (1425)
.+||+|+|++|+||+.+||+||||||||||+++|+|+++|+
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999982
Q ss_pred ------------CCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHh
Q 047682 175 ------------LKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRRE 239 (1425)
Q Consensus 175 ------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 239 (1425)
...+|+|++||+++++... ++.++||+|++.+| +.|++|||.++..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~------------------ 1321 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE------------------ 1321 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC------------------
Confidence 0138999999999987664 57899999976655 7899999999731
Q ss_pred hhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecC
Q 047682 240 KDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEI 319 (1425)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEp 319 (1425)
+.+.+++.+|+...+. .+.+ -.|++.+||.||+.+. .||||||||++|||||+++|+||+||||
T Consensus 1322 -------~at~eeI~~A~k~A~l-----~~fI---~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1322 -------DATREDVKRACKFAAI-----DEFI---ESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -------CCCHHHHHHHHHHcCC-----HHHH---HhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1122233333322111 1222 3588999999998765 5999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcC----CeEE-EecChhHHHH
Q 047682 320 STGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISE----GQIV-FQGPREHVLE 383 (1425)
Q Consensus 320 tsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~----G~iv-~~G~~~~~~~ 383 (1425)
||+||+.++..|.+.|+++....++|+|+ +.|.. ++.+.||+|++|++ |+++ ++|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEE-EechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999874223566666 45544 56788999999999 9955 8999999863
No 402
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.35 Aligned_cols=219 Identities=20% Similarity=0.233 Sum_probs=174.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 377888887763 246999999999999999999999999999999999975431 2369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 999999887543311 1122234556778888887532111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57788999999986 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 8888875
No 403
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=356.63 Aligned_cols=218 Identities=26% Similarity=0.316 Sum_probs=181.6
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 70 (510)
T PRK09700 6 ISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYN 70 (510)
T ss_pred EEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECC
Confidence 78889887763 2469999999999999999999999999999999999765 34799999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHhhcc--C-C-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 907 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLR--L-P-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr--~-~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
.. ..++.+||++|++.+++.+||+||+.++.... . . ...+.++.++.++++++.+||.+..+..+ ..
T Consensus 71 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (510)
T PRK09700 71 KLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----AN 145 (510)
T ss_pred CCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hh
Confidence 31 12346899999998999999999998753210 0 0 01123344566889999999988777664 47
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. .+.+.+|++++|++ |++
T Consensus 146 LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i 223 (510)
T PRK09700 146 LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSS 223 (510)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999999888999999999986 57788999999996 678
Q ss_pred EEECCCCC
Q 047682 1059 IYVGPLGR 1066 (1425)
Q Consensus 1059 ~y~G~~~~ 1066 (1425)
++.|+..+
T Consensus 224 ~~~g~~~~ 231 (510)
T PRK09700 224 VCSGMVSD 231 (510)
T ss_pred eeecchhh
Confidence 89998753
No 404
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8e-34 Score=321.84 Aligned_cols=213 Identities=23% Similarity=0.297 Sum_probs=169.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEECCccCCCCCc----cceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKL--DPSLKLSGRVTYNGHNMDEFVP----QRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 207 (1425)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 45999999999999999999999999999999999995 576 9999999998765432 23489999999999
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV-CADTMVG 286 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg 286 (1425)
+.+|++|++.+..+....... +. ..+ ..+....++.+++.+||+. ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~----------~~------~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG----------EE------PLD-----------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc----------cc------ccc-----------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999886432110000 00 000 0011234677899999973 4554443
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh-cCeEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDL-FDDII 365 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~-~D~vi 365 (1425)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999854 34 4555578888888888 89999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987654
No 405
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.67 Aligned_cols=219 Identities=25% Similarity=0.263 Sum_probs=175.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478889887763 246999999999999999999999999999999999964311 1379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++. ||+||+.+....+. .......++.+.++++.+++.+....... ..+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87542 2345679999999988875 99999998754431 11223344567888888887532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 57788999999997 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 8888875
No 406
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.87 Aligned_cols=215 Identities=25% Similarity=0.266 Sum_probs=174.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc-
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP- 904 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~- 904 (1425)
-++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 378889888763 2369999999999999999999999999999999999765 347999999986
Q ss_pred ----CCcc---c----ccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 047682 905 ----KKQE---T----FARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSL 970 (1425)
Q Consensus 905 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 970 (1425)
.... . .++.++|++|+.. +.+.+|+.||+.+...... .....+.++.+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5678899999976432111 1122334556788999999963 44443
Q ss_pred cCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEE
Q 047682 971 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1049 (1425)
Q Consensus 971 ~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v 1049 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEeCCcEEEEECCC
Q 047682 1050 FLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1050 ~~l~~Gg~~~y~G~~ 1064 (1425)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99997 688898875
No 407
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.89 Aligned_cols=210 Identities=18% Similarity=0.287 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCcccEEEECCccCCCCC-----ccceEEEEccCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGK---LDPSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDV 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 205 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3599999999999999999999999999999999997 3331 12899999999875421 2357999999887
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
.++ .||+||+.++.+..+... . ......++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD----------N-----------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc----------H-----------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 699999988643321100 0 001224567888899864322222
Q ss_pred cCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
+..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+++
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEE
Confidence 234456999999999999999999999999999999999999999999999842 4 455557888889999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 408
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.34 Aligned_cols=213 Identities=22% Similarity=0.270 Sum_probs=173.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc--eEEEEEEEcCc
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNIKISGY 903 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~--~~~G~i~i~g~ 903 (1425)
.++++|+++.++ +.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578899887651 25899999999999999999999999999999999976531 15799999998
Q ss_pred cCCcccc-cceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc---ccccccCCCCCC
Q 047682 904 PKKQETF-ARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP---LRQSLVGLPGVS 977 (1425)
Q Consensus 904 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~g~~~~~ 977 (1425)
+...... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643222 356999999974 4567899999876443221 111 2245788999999976 23433 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 57788999999986 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 78888875
No 409
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.07 Aligned_cols=211 Identities=19% Similarity=0.316 Sum_probs=166.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCCC-----ccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 206 (1425)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998751 013899999999875421 24679999999877
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++ +|++||+.|.....+... . .+....++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKD---------K------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 76 899999998653321100 0 011223456778888742110111
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+...+.||||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+ +. +++.++|+..++.+++|++++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~-tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EY-TIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEEcCHHHHHHhcCEEEE
Confidence 233456999999999999999999999999999999999999999999999854 44 455577888889999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999998874
No 410
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.24 Aligned_cols=212 Identities=19% Similarity=0.292 Sum_probs=168.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|+..+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111289999999987532 124679999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++.+||+||+.++.+..+... . .+....++++++.+|+........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------R------------------------SEADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 999999999987643211000 0 001223567788888854211111
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+..++.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123456999999999999999999999999999999999999999999999854 4 4556578888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 411
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=326.10 Aligned_cols=215 Identities=20% Similarity=0.275 Sum_probs=174.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~-~~~~G~i~i~g 902 (1425)
.+.++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578999988763 2359999999999999999999999999999999999632 1 02579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN----PLRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++. ||.||+.+....+. ..+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 99999998654321 112233345677888888874 223332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 7 688888875
No 412
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=321.06 Aligned_cols=218 Identities=19% Similarity=0.242 Sum_probs=176.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--c-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~--~-~~~G~i~i~g 902 (1425)
.+..+++++.+ +++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.++|
T Consensus 8 ~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 74 (261)
T PRK14263 8 VMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLG 74 (261)
T ss_pred eEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECC
Confidence 46667766654 235799999999999999999999999999999999997542 1 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ....++.++++++.++|.+..+...+ ...+
T Consensus 75 ~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 148 (261)
T PRK14263 75 QDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGL 148 (261)
T ss_pred EeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87532 23456799999998877 5999999988754331 1 12234567889999998643322221 1256
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe----
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK---- 1053 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~---- 1053 (1425)
.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~ 226 (261)
T PRK14263 149 SLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDIS 226 (261)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 799999999999999999999999999999999999999999999986 4799999999986 5778999999997
Q ss_pred ---CCcEEEEECCC
Q 047682 1054 ---RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ---~Gg~~~y~G~~ 1064 (1425)
++|+++..|+.
T Consensus 227 ~~~~~G~i~~~g~~ 240 (261)
T PRK14263 227 QGTRTGYLVEMGPT 240 (261)
T ss_pred cccCCceEEEeCCH
Confidence 45899999985
No 413
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4e-34 Score=317.66 Aligned_cols=195 Identities=22% Similarity=0.364 Sum_probs=162.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCC-----CccceEEEEccCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 208 (1425)
.++|+|+|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999998 99999999987421 12467999999988888
Q ss_pred CCCHHHHHHhhhhh-cCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 209 EMTVRETLAFSARC-QGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
.+||+||+.++... .+.. ..+....++.+++.+|+++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------------------------------KAEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 99999999886421 1100 0011224567888999987666555
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++++.++|+..++.+++|++++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 45999999999999999999999999999999999999999999999865 34 44555788888999999999999
Q ss_pred cCCeE
Q 047682 368 SEGQI 372 (1425)
Q Consensus 368 ~~G~i 372 (1425)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 414
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.5e-34 Score=324.89 Aligned_cols=207 Identities=20% Similarity=0.249 Sum_probs=169.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCC--CCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDV--HIG 208 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 208 (1425)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999998 9999999998753221 246999999864 567
Q ss_pred CCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccccC
Q 047682 209 EMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTMVGD 287 (1425)
Q Consensus 209 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~ 287 (1425)
.+||.|++.+..+.... ... .+....++.+++.+||. +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LEP------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccC---------CCH------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999876432110 000 01122456789999994 5555444
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+..++.++||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQG-ISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhcCEEEEE
Confidence 46999999999999999999999999999999999999999999999875434 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 415
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.85 Aligned_cols=219 Identities=23% Similarity=0.285 Sum_probs=177.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899988773 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 047682 903 YPKKQ----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSG 978 (1425)
Q Consensus 903 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 978 (1425)
.+... ...++.++|++|++.+++ .|++||+.+..... ...+.++.++.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567899999988887 89999998764322 112334444556788899998653221111 12467
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEE
Q 047682 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1058 (1425)
Q Consensus 979 lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~ 1058 (1425)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57889999999996 688
Q ss_pred EEECCC
Q 047682 1059 IYVGPL 1064 (1425)
Q Consensus 1059 ~y~G~~ 1064 (1425)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 898885
No 416
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=313.97 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=171.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ ++.+++++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478899887652 23699999999999999999999999999999999997653 479999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 906 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
.....++.++|++|++.+++.+|++||+.+....+. .. .++.++++++.++|.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988898999999987654321 11 2234678899999987766653 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
|++||++|+.+|++|+|||||+|||+.+++.+.+.|+++.++|+|||+++|+++ ++.+.+|++++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999997 68899999999863
No 417
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=323.87 Aligned_cols=215 Identities=20% Similarity=0.252 Sum_probs=173.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~-~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999988763 2469999999999999999999999999999999999532 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++. |++||+.+..... ........++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 1345679999999988875 9999998764322 11122233455778888888852 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778999999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 688898875
No 418
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.13 Aligned_cols=215 Identities=26% Similarity=0.321 Sum_probs=174.0
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g 902 (1425)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 378889888763 2469999999999999999999999999999999999754 11 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999988776 799999987643221 1122333456788899999852 22322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 677888875
No 419
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-33 Score=319.11 Aligned_cols=203 Identities=23% Similarity=0.264 Sum_probs=166.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcccEEEECCccCCCCCc-cceEEEEccCCC--CC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP----SLKLSGRVTYNGHNMDEFVP-QRTAAYISQHDV--HI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~ 207 (1425)
++|+|+|+++++||+++|+||||||||||+++|+|.++| + +|+|.++|++++.... ++.++|++|++. +.
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~ 93 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFN 93 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccC
Confidence 489999999999999999999999999999999999988 6 9999999998754332 257999999864 44
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc---ccccc
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV---CADTM 284 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~ 284 (1425)
+..|+.+++.+.++..+.. .....++.+++.+||.+ ..++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (254)
T PRK10418 94 PLHTMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKLY 137 (254)
T ss_pred ccccHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhcC
Confidence 6679999987643221100 00123566888899975 23333
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
.+.|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+.+|++
T Consensus 138 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v 211 (254)
T PRK10418 138 -----PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDV 211 (254)
T ss_pred -----CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987643 445555788888899999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 212 AVMSHGRIVEQGDVETLF 229 (254)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999988774
No 420
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=313.66 Aligned_cols=224 Identities=22% Similarity=0.297 Sum_probs=181.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC-C-c-eEEEEEEEcCc
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YITGNIKISGY 903 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~-~-~-~~~G~i~i~g~ 903 (1425)
++.+|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4567777666432 123579999999999999999999999999999999999765 2 3 56789999998
Q ss_pred cCC---ccc----ccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 047682 904 PKK---QET----FARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLP 974 (1425)
Q Consensus 904 ~~~---~~~----~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 974 (1425)
++- ++. +.+.++|++|++ .+.|.+||.+.+.-......... .+++.++.+.++|+.++|.+-....-.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~-- 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS-- 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--
Confidence 642 221 235799999996 56799999988876554332111 355567778999999999864333222
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
...+|||||||||.||.||+.+|++|+.||||++||...+++|++.|+++.+ .|.|+|++|||.. -+.+++|||.||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 2468999999999999999999999999999999999999999999999986 5999999999997 4889999999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
. |++|..||.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 6 799999996
No 421
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=318.81 Aligned_cols=209 Identities=19% Similarity=0.281 Sum_probs=167.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcccEEEECCccCCCCC---ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD---PSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 207 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|+++|+++.+.. .++.++|++|++.++
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 359999999999999999999999999999999999975 45 899999999886543 245799999988777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ .||+||+.++....+... .. ......++.+++.+||........ +
T Consensus 92 ~-~tv~eni~~~~~~~~~~~-------------------~~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 137 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIK-------------------NK-------------DEEEALVVDCLQKVGLFEEVKDKL-K 137 (246)
T ss_pred c-ccHHHHhhhHHhhcCccc-------------------Ch-------------HHHHHHHHHHHHHcCCChhhhHHh-c
Confidence 6 699999998643321100 00 011223567888899853211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+..+.|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++.+ + ++++.++|+.+++.+.+|++++|
T Consensus 138 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~l 214 (246)
T PRK14269 138 QNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--N-LSMIMVTHNMQQGKRVADYTAFF 214 (246)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecCHHHHHhhCcEEEEE
Confidence 34467999999999999999999999999999999999999999999998743 4 45565788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 215 HLGELIEFGESKEFF 229 (246)
T ss_pred ECCEEEEECCHHHHH
Confidence 999999999988764
No 422
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.4e-34 Score=312.06 Aligned_cols=199 Identities=23% Similarity=0.303 Sum_probs=164.8
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677776652 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHH
Q 047682 907 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQR 984 (1425)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 984 (1425)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.+||.+..+.. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988999999999988654321 1 1234578899999998776665 457999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 047682 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1052 (1425)
Q Consensus 985 qRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l 1052 (1425)
||++||++|+++|++++|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998877899999999986 354444566655
No 423
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.40 Aligned_cols=225 Identities=25% Similarity=0.331 Sum_probs=178.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++... ..+. ..++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888887763100 0000 013579999999999999999999999999999999999765 35899999998653
Q ss_pred c------ccccceEEEeecCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 047682 907 Q------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 977 (1425)
. ...++.++|++|+. .+.+..|+.|++.+..... ...+..+....++++++.+++. +..+.. ..
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12356799999997 3567899999987643211 1223344455688999999996 455554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 57778999999986 6
Q ss_pred EEEEECCCCC
Q 047682 1057 YEIYVGPLGR 1066 (1425)
Q Consensus 1057 ~~~y~G~~~~ 1066 (1425)
++++.|+..+
T Consensus 229 ~i~~~g~~~~ 238 (268)
T PRK10419 229 QIVETQPVGD 238 (268)
T ss_pred EEeeeCChhh
Confidence 8889998643
No 424
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.1e-34 Score=311.73 Aligned_cols=184 Identities=27% Similarity=0.336 Sum_probs=159.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ--ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 4699999999999999999999999999999999998653 47999999987532 2345679999999988889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+||+.+.... . .++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999875311 1 134578899999998776665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 047682 1010 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1052 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l 1052 (1425)
|+.++..+++.|+++.++|+|+|+++|++. +..+.+|+++++
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998877999999999986 577889999877
No 425
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.7e-33 Score=355.26 Aligned_cols=209 Identities=23% Similarity=0.359 Sum_probs=165.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++ .
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~-~ 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFP-G 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCccccc-c
Confidence 35899999999999999999999999999999999999998 9999999999876543 468999999877765 5
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|++||+.++.. +.+.+.+.+++... ..++.++. |++..||.+|+.+
T Consensus 407 ti~~Ni~~~~~-------------------------~~~~~~~~~~~~~~------~~~~~i~~--l~~gl~t~~~~~g- 452 (544)
T TIGR01842 407 TVAENIARFGE-------------------------NADPEKIIEAAKLA------GVHELILR--LPDGYDTVIGPGG- 452 (544)
T ss_pred cHHHHHhccCC-------------------------CCCHHHHHHHHHHh------ChHHHHHh--CccccccccCCCc-
Confidence 99999985421 00111111111110 11233333 4556789998754
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|+ ++|+.+ ..+.||+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~-ith~~~-~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVV-ITHRPS-LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEE-EeCCHH-HHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998742 3456666 455544 56789999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
++++.|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 426
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=319.00 Aligned_cols=219 Identities=25% Similarity=0.305 Sum_probs=172.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--Cc-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~~-~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 378889887763 2469999999999999999999999999999999999642 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++......... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 87531 234567999999988887 6999999886543311 1122223456677888876421111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 589999999986 57788999999986 67
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 8888875
No 427
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=318.63 Aligned_cols=210 Identities=21% Similarity=0.344 Sum_probs=165.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++..+
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 5212389999999987431 1246799999988777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ +||+||+.++....+... + ......++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD--K-------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 899999998643221100 0 001223456777787743211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.++.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34456999999999999999999999999999999999999999999999853 4 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 428
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.6e-33 Score=352.17 Aligned_cols=220 Identities=23% Similarity=0.353 Sum_probs=180.4
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56778877662 24699999999999999999999999999999999997653224899999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHcCCcccc-ccccCCCCCCcCC
Q 047682 907 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPP-DVDSETRRMFLEEIMELVELNPLR-QSLVGLPGVSGLS 980 (1425)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lS 980 (1425)
.. ..++.+||++|++.+++.+||+|++.+....+... ....++.++.++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 31 12356899999998899999999998764332111 122334456688999999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 981 gGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999997 57888
Q ss_pred ECCCCC
Q 047682 1061 VGPLGR 1066 (1425)
Q Consensus 1061 ~G~~~~ 1066 (1425)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 888753
No 429
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=313.21 Aligned_cols=192 Identities=28% Similarity=0.437 Sum_probs=160.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCCCCCCCCC
Q 047682 139 DVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 139 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 211 (1425)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 999999998865311 2457999999988888999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++||+.+..... . . ......++.+++.+||++..++.+ +
T Consensus 92 ~~~~l~~~~~~~---~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R---------N------------------------REDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C---------H------------------------HHHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998753210 0 0 001123567888999986666544 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++++.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLN-IPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999876434 455557888889999999999999999
Q ss_pred EEEec
Q 047682 372 IVFQG 376 (1425)
Q Consensus 372 iv~~G 376 (1425)
++++|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98765
No 430
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.20 Aligned_cols=210 Identities=20% Similarity=0.326 Sum_probs=165.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999987 3212389999999987531 1245799999998777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+. ||+||+.++.+..+... . .+....++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKN---------K------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 99999988643221000 0 011223456778888753211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
...+.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.. ++ +++.++|+.+++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KY-TIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CC-EEEEEEcCHHHHHHhCCEEEEE
Confidence 34456999999999999999999999999999999999999999999999843 44 4555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998874
No 431
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.96 Aligned_cols=211 Identities=20% Similarity=0.324 Sum_probs=166.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999987410 1289999999887421 1246799999998889
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+.+||+||+.++....+... . ......++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------K------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 99999999988653221000 0 011224566788888842111111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..+..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++ ++ +|+.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DY-TIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CC-EEEEEecCHHHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999853 44 5555788888999999999999
Q ss_pred c------CCeEEEecChhHHH
Q 047682 368 S------EGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~------~G~iv~~G~~~~~~ 382 (1425)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999988774
No 432
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=358.74 Aligned_cols=207 Identities=24% Similarity=0.382 Sum_probs=166.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++++||+.++|+|+||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|++.++ +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 4899999999999999999999999999999999999998 9999999999887653 47899999976655 669
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++|||.++.. +.+.+.+.+++...+ .+..++ .+++..||.+|+.+ +
T Consensus 425 i~~Ni~~~~~-------------------------~~~d~~i~~al~~~~------l~~~i~--~lp~gldt~i~~~g-~ 470 (588)
T PRK13657 425 IEDNIRVGRP-------------------------DATDEEMRAAAERAQ------AHDFIE--RKPDGYDTVVGERG-R 470 (588)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHHH--hCcccccchhcCCC-C
Confidence 9999998521 111111222211110 111122 25677899998764 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++|||||+++|++++||||||+||+.++..|.+.|++..+ ++|+|+ ++|+. +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-itHr~-~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMK--GRTTFI-IAHRL-STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhc--CCEEEE-EEecH-HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999988642 566666 45544 4568899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 433
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-33 Score=312.32 Aligned_cols=199 Identities=22% Similarity=0.331 Sum_probs=165.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-ccceEEEEccCCCCCCCCCHHH
Q 047682 136 ILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-PQRTAAYISQHDVHIGEMTVRE 214 (1425)
Q Consensus 136 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 214 (1425)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999998 999999999875432 2467999999988899999999
Q ss_pred HHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 047682 215 TLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRGIS 294 (1425)
Q Consensus 215 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LS 294 (1425)
|+.+...... .. + .+....++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~------------------~---------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KL------------------N---------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Cc------------------c---------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 00 0 001223567889999987666554 4699
Q ss_pred hhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCeEEE
Q 047682 295 GGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQIVF 374 (1425)
Q Consensus 295 GGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 374 (1425)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSER-QRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999999999999999999999999999999986533 4555557888888899999999999999998
Q ss_pred ecC
Q 047682 375 QGP 377 (1425)
Q Consensus 375 ~G~ 377 (1425)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 434
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.9e-33 Score=313.95 Aligned_cols=192 Identities=26% Similarity=0.351 Sum_probs=159.2
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
+++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999765 358999999975321 1112334578999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 047682 930 YESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgL 1009 (1425)
+||+.+....+ ..+..+.++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99998765432 1233444556788999999988777654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 1010 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998877899999999986 57778999999986 6776654
No 435
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.1e-34 Score=363.37 Aligned_cols=210 Identities=27% Similarity=0.418 Sum_probs=174.6
Q ss_pred ceEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc
Q 047682 825 LSLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP 904 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~ 904 (1425)
..++|+|+++.+. +++++|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986542 1246999999999999999999999999999999999976 3 37999999988
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccCCC
Q 047682 905 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-------LRQSLVGLP 974 (1425)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 974 (1425)
..+ +.+++.++||+|++.++.. |++||+.++. ++.++++ ++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~-----~~~~~ee----i~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN-----PDASDEQ----LQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC-----CCCCHHH----HHHHHHHhCHHHHHHhcccccccccccC
Confidence 653 4567889999999988864 9999998752 2344433 556666666553 236667755
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 975 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 975 ~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999885 5899999999985 5678999999986
Q ss_pred CcEEEEECCC
Q 047682 1055 GGYEIYVGPL 1064 (1425)
Q Consensus 1055 Gg~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 688888874
No 436
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.9e-34 Score=323.03 Aligned_cols=209 Identities=25% Similarity=0.384 Sum_probs=161.0
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 46777766531 12469999999999999999999999999999999999765 347999999986532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHH-----HHHHHHHHc--CCccccccccCCCCCC
Q 047682 908 ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRM-----FLEEIMELV--ELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 908 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~-----~v~~~l~~l--~l~~~~~~~~g~~~~~ 977 (1425)
..+++.++|++|++.+++ .||.||+.+... ........+ ..+++++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987764 699999976421 111111110 112233333 333222222 46
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|+++ ++ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 899999999996 35 56999999997 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 8898875
No 437
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-33 Score=352.53 Aligned_cols=211 Identities=22% Similarity=0.319 Sum_probs=179.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 378899988763 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCH
Q 047682 906 KQE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 981 (1425)
... . .++.+||++|++.+++.+||+|++.+... . ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 421 1 22458999999999999999999987531 1 1233456789999999987777654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1061 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~ 1061 (1425)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 57788999999997 678899
Q ss_pred CCCC
Q 047682 1062 GPLG 1065 (1425)
Q Consensus 1062 G~~~ 1065 (1425)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9874
No 438
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.69 Aligned_cols=218 Identities=24% Similarity=0.390 Sum_probs=174.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 478899988763 12469999999999999999999999999999999999865 3589999999875
Q ss_pred CcccccceEEEeecCCCCC--CCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 906 KQETFARISGYCEQNDIHS--PNVTVYESLLYSAWLRLP-PDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
.....++.++|++|++.+. ...+++|++.+....... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997652 235788988653210000 01111223445788899999988777654 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577899999777 5 6888999
Q ss_pred CCC
Q 047682 1063 PLG 1065 (1425)
Q Consensus 1063 ~~~ 1065 (1425)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 439
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-34 Score=311.48 Aligned_cols=202 Identities=25% Similarity=0.297 Sum_probs=181.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc------cc-ccceEEEeecCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ------ET-FARISGYCEQNDIHS 924 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~-~~~~~gyv~Q~~~~~ 924 (1425)
..-++|+|++|+.||++.|||-||||||||+++|.+... +..|+|.++|.++.. .. .++.++.|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 346899999999999999999999999999999999876 458999999987532 12 345789999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 047682 925 PNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1425)
Q Consensus 925 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDE 1004 (1425)
|+.||.||..|+..++ .+++++++++..+.++.+||..+.+.. +.+||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 577889999999999999999999887 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1005 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|+|.|||--+.++++-|.++.++ ++|||++|||.. |.+.+-|||.+|++ |+++-.|.+.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimkd-G~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMKD-GEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEecC-CeEEEeCCHH
Confidence 99999999999999999888655 899999999997 78899999999985 7999999874
No 440
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=322.21 Aligned_cols=215 Identities=22% Similarity=0.231 Sum_probs=172.8
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~-~~~~G~i~i~g 902 (1425)
-++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 488999988763 2358999999999999999999999999999999999753 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN----PLRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 973 (1425)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999988877 499999988653321 112223344567777777543 222322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1053 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~ 1053 (1425)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 799999999986 5778899999999
Q ss_pred CCcEEEEECCC
Q 047682 1054 RGGYEIYVGPL 1064 (1425)
Q Consensus 1054 ~Gg~~~y~G~~ 1064 (1425)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 7 678888875
No 441
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=322.08 Aligned_cols=206 Identities=20% Similarity=0.315 Sum_probs=163.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcccEEEECCccCCCC-----CccceEEEEccCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD-----PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHD 204 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 204 (1425)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 58999999999999999999999999999999999987 35 99999999886421 1235799999998
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+++ .||+||+.+++...+.. . +....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~----------~-------------------------~~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYT----------G-------------------------DMDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCc----------H-------------------------HHHHHHHHHHHHhCCcchhhhh
Confidence 7777 59999999875432110 0 0011234566677664211111
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. +..++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.++||++
T Consensus 148 ~-~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 L-NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred h-CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEE
Confidence 1 233456999999999999999999999999999999999999999999998843 4 45566788888999999999
Q ss_pred EEEcC-----------CeEEEecChhHHHH
Q 047682 365 ILISE-----------GQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~-----------G~iv~~G~~~~~~~ 383 (1425)
++|++ |++++.|+.+++.+
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHHh
Confidence 99996 67899999988753
No 442
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=317.87 Aligned_cols=210 Identities=21% Similarity=0.350 Sum_probs=164.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDP--SLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|++|++||+++|+||||||||||+++|+|..++ ....+|+|.++|+++.+. ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998763 112389999999987531 1245799999988777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ +||+||+.++....+... . ......++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKD---------K------------------------KKLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 899999998654322100 0 001223455677777642111111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.+..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++.+ +. +|+.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~-tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DY-TIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CC-eEEEEEeCHHHHHhhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999843 44 4555788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 443
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=302.32 Aligned_cols=168 Identities=29% Similarity=0.444 Sum_probs=148.2
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 4667766552 23599999999999999999999999999999999997653 47999999987543
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHH
Q 047682 908 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRK 985 (1425)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrq 985 (1425)
..+++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998889899999873 8999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 986 Rl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999986 577789999999975
No 444
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=317.52 Aligned_cols=211 Identities=20% Similarity=0.343 Sum_probs=166.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 11289999999887532 124679999998877
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++ .||+||+.++....+... . ...+..+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS---------K------------------------HKLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc---------H------------------------HHHHHHHHHHHHHcCCCchhHHH-H
Confidence 76 899999998643221100 0 00112345677778875421111 1
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
++..+.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++++.++|+..++.+++|++++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 344567999999999999999999999999999999999999999999999853 4 4555578888889999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988774
No 445
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4.4e-33 Score=317.43 Aligned_cols=220 Identities=23% Similarity=0.292 Sum_probs=174.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378889887663 2469999999999999999999999999999999999621124589999999875
Q ss_pred Ccc---cccc-eEEEeecCCCCCCCCCHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 047682 906 KQE---TFAR-ISGYCEQNDIHSPNVTVYESLLYSAWLRLP----PDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGV 976 (1425)
Q Consensus 906 ~~~---~~~~-~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 976 (1425)
... ..++ .++|++|++.+++.+|++|++.+....... .+....+..+.+.++++.+++. +..+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999999765432110 1112223345678889999996 34444422
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEeCC
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1055 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fD~v~~l~~G 1055 (1425)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999999877999999999986 35555 799999986
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 688999976
No 446
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=321.19 Aligned_cols=218 Identities=19% Similarity=0.217 Sum_probs=173.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCc---eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~---~~~G~i~i~g 902 (1425)
-+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 588999988763 246999999999999999999999999999999999964311 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.+++.++.+++......... ..+.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCcc
Confidence 87532 2345679999999888775 99999987643321 11 1223446677888877421111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC---
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1054 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~--- 1054 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~ 238 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEID 238 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999875 799999999997 58889999999972
Q ss_pred -----CcEEEEECCC
Q 047682 1055 -----GGYEIYVGPL 1064 (1425)
Q Consensus 1055 -----Gg~~~y~G~~ 1064 (1425)
.|++++.|+.
T Consensus 239 ~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 239 EYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccCceEEEeCCH
Confidence 4788999986
No 447
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=322.17 Aligned_cols=213 Identities=23% Similarity=0.270 Sum_probs=173.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~---~~~~G~i~i~g 902 (1425)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 488899988763 24699999999999999999999999999999999997541 13579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGL 973 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 973 (1425)
.+... ...++.++|++|+..+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999888775 99999987654331 122 23456788999998853 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEE-EE
Q 047682 974 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1052 (1425)
Q Consensus 974 ~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~-~l 1052 (1425)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999986 5778899975 56
Q ss_pred eCCcEEEEECCC
Q 047682 1053 KRGGYEIYVGPL 1064 (1425)
Q Consensus 1053 ~~Gg~~~y~G~~ 1064 (1425)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 75 678888875
No 448
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.03 Aligned_cols=207 Identities=24% Similarity=0.343 Sum_probs=168.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCcc-----CCCCCc-------cceEEEEc
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHN-----MDEFVP-------QRTAAYIS 201 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 201 (1425)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999998 9999999987 554321 24699999
Q ss_pred cCC--CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc
Q 047682 202 QHD--VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDV 279 (1425)
Q Consensus 202 Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 279 (1425)
|++ .+.+.+|+.||+.+.....+. . +. .+....++++++.+|+..
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~-~---------------------~~-----------~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGA-R---------------------HY-----------GDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhcc-C---------------------cH-----------HHHHHHHHHHHHHcCCCh
Confidence 986 357778999999764221100 0 00 001223567888999963
Q ss_pred -cccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHH
Q 047682 280 -CADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETY 358 (1425)
Q Consensus 280 -~~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~ 358 (1425)
..++.+ ..|||||||||+|||||+.+|++++|||||+|||..+...+.+.|+++.+.. +.+|+.++|+..++.
T Consensus 143 ~~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHH
Confidence 445444 4699999999999999999999999999999999999999999999886543 455666788998999
Q ss_pred hhcCeEEEEcCCeEEEecChhHHH
Q 047682 359 DLFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 359 ~~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988764
No 449
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=318.63 Aligned_cols=207 Identities=17% Similarity=0.278 Sum_probs=162.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcccEEEECCccCCCC-----CccceEEEEccCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD-----PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHD 204 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 204 (1425)
++|+|+|+++++||+++|+||||||||||+++|+|..+ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 58999999999999999999999999999999999864 45 89999999987532 1245799999998
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+++. ||+||+.++.+..+... . ...+..++..++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERR---------K------------------------SVLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCCcchHHH
Confidence 77775 99999998643211000 0 00012244566777774211011
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. ++.+..||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+++|+|
T Consensus 158 ~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 L-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred H-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1 233456999999999999999999999999999999999999999999999853 4 45555788888899999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 450
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=350.16 Aligned_cols=216 Identities=27% Similarity=0.324 Sum_probs=179.1
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 77888887763 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 907 Q----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
. ..+++.+||++|++.+++.+||+||+.+....+.....+..+.++.++++++.++|.+..+.. +..||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCHH
Confidence 2 123567999999998999999999998753211111123334456688999999998766655 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEEC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1062 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G 1062 (1425)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeec
Confidence 999999999999999999999999999999999999999999878999999999986 57788999999997 5777666
Q ss_pred CC
Q 047682 1063 PL 1064 (1425)
Q Consensus 1063 ~~ 1064 (1425)
+.
T Consensus 223 ~~ 224 (501)
T PRK11288 223 DD 224 (501)
T ss_pred Cc
Confidence 53
No 451
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=4.3e-32 Score=349.01 Aligned_cols=123 Identities=23% Similarity=0.298 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCcCCHHHHHHHHHHHHHhh---CCcEEE
Q 047682 926 NVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1001 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqrqRl~ia~~L~~---~p~ill 1001 (1425)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 578888888765432 11 123578888999753 3443 45799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----CCcEEEEECCC
Q 047682 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPL 1064 (1425)
Q Consensus 1002 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~-----~Gg~~~y~G~~ 1064 (1425)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 346799999994 57899999986
No 452
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-33 Score=280.52 Aligned_cols=201 Identities=27% Similarity=0.384 Sum_probs=170.3
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc-------cceEEEEcc
Q 047682 130 RKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP-------QRTAAYISQ 202 (1425)
Q Consensus 130 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 202 (1425)
...+.+||++|++.|++||.++|+|||||||||||-+|+|+.+|+ +|+|.+.|+++..+.. .+.+|+|+|
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQ 95 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQ 95 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEE
Confidence 345678999999999999999999999999999999999999999 9999999999876542 268999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 047682 203 HDVHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCAD 282 (1425)
Q Consensus 203 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 282 (1425)
...++|+||..||+...+.+++-..+ +........|+.+||.+-.+
T Consensus 96 SF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~ 141 (228)
T COG4181 96 SFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRLT 141 (228)
T ss_pred eeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCcccccc
Confidence 99999999999999988776652111 01223456789999987665
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
.. +.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+.. +++++.++|+ +.....||
T Consensus 142 Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~-G~TlVlVTHD-~~LA~Rc~ 214 (228)
T COG4181 142 HY-----PAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRER-GTTLVLVTHD-PQLAARCD 214 (228)
T ss_pred cC-----ccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhc-CceEEEEeCC-HHHHHhhh
Confidence 44 45699999999999999999999999999999999999999999999998765 4555545555 46778999
Q ss_pred eEEEEcCCeEEE
Q 047682 363 DIILISEGQIVF 374 (1425)
Q Consensus 363 ~vilL~~G~iv~ 374 (1425)
|++-|.+|+++.
T Consensus 215 R~~r~~~G~l~~ 226 (228)
T COG4181 215 RQLRLRSGRLVE 226 (228)
T ss_pred heeeeecceecc
Confidence 999999999974
No 453
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=317.21 Aligned_cols=212 Identities=19% Similarity=0.311 Sum_probs=166.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCCC-----ccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEFV-----PQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|++|++|++++|+||||||||||+++|+|..+ |+...+|+|+++|+++.+.. .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 359999999999999999999999999999999999986 21112899999998865321 24679999998877
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++. ||+||+.++....+.... ..+....++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------------------------------KKKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHh-
Confidence 775 999999886432211000 0001123566788899865322222
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+..++.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++.+ + .+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--N-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhcCEEEE
Confidence 234457999999999999999999999999999999999999999999998842 4 4555578888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 454
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-33 Score=355.61 Aligned_cols=207 Identities=25% Similarity=0.342 Sum_probs=165.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+++ .|
T Consensus 329 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~t 404 (569)
T PRK10789 329 PALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS-DT 404 (569)
T ss_pred ccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeecc-cc
Confidence 5899999999999999999999999999999999999998 9999999999876543 467999999876665 69
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++|||.++... .+.+.+.+++...+ .+. ....|++..||.+|+.+ .
T Consensus 405 i~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~------l~~--~i~~lp~gl~t~~~~~g-~ 450 (569)
T PRK10789 405 VANNIALGRPD-------------------------ATQQEIEHVARLAS------VHD--DILRLPQGYDTEVGERG-V 450 (569)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHcC------CHH--HHHhCcCcccceecCCC-C
Confidence 99999875210 01111111111100 000 12346778899999864 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++. .++|+|++ +|+. +..+.+|+|++|++|+
T Consensus 451 ~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~i-tH~~-~~~~~~d~i~~l~~G~ 526 (569)
T PRK10789 451 MLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIIS-AHRL-SALTEASEILVMQHGH 526 (569)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecch-hHHHcCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999874 35666664 4444 4557799999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++.+|+++++.+
T Consensus 527 i~~~g~~~~l~~ 538 (569)
T PRK10789 527 IAQRGNHDQLAQ 538 (569)
T ss_pred EEEecCHHHHHH
Confidence 999999998864
No 455
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-34 Score=332.03 Aligned_cols=212 Identities=25% Similarity=0.381 Sum_probs=178.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++++++. ++.++|+|+|+++++||.+||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6899999999863 34579999999999999999999999999999999999765 4589999999885
Q ss_pred C---cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcccccc-------ccCCCC
Q 047682 906 K---QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQS-------LVGLPG 975 (1425)
Q Consensus 906 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~ 975 (1425)
. +...++.+++++|...+|. -|+++||..+. ++.++++ +.++++.+||++.... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~AsDEe----l~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDASDEE----LWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCCHHH----HHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 4 3345677899999876664 59999997642 3444443 6788999999876444 3444 3
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
.+.||||||||++|||+|++|.++++|||||.|||+.+.++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999998774 999999999985 4688999999996
Q ss_pred cEEEEECCCC
Q 047682 1056 GYEIYVGPLG 1065 (1425)
Q Consensus 1056 g~~~y~G~~~ 1065 (1425)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 6889998753
No 456
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=315.39 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=165.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (251)
T PRK14249 17 HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNP 96 (251)
T ss_pred eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999998751 1259999999887532 124679999999887
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++. ||+||+.++....+... . ++.....+.+++.+||.+......
T Consensus 97 ~~~-tv~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~l~~~~- 141 (251)
T PRK14249 97 FPK-SIFDNVAFGPRMLGTTA----------Q-----------------------SRLDEVVEKSLRQAALWDEVKDNL- 141 (251)
T ss_pred CcC-cHHHHHhhHHHhcCCCh----------h-----------------------hHHHHHHHHHHHHhCCchhhhhHh-
Confidence 775 99999998654321100 0 001122345566667643211111
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
++....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+.+|++++
T Consensus 142 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tilivsh~~~~~~~~~d~i~~ 218 (251)
T PRK14249 142 HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--QN-YTIAIVTHNMQQAARASDWTGF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHhhCCEEEE
Confidence 23455799999999999999999999999999999999999999999999883 24 4555578899999999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 219 LLTGDLVEYGRTGEIF 234 (251)
T ss_pred EeCCeEEEeCCHHHHH
Confidence 9999999999988774
No 457
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=316.80 Aligned_cols=211 Identities=20% Similarity=0.351 Sum_probs=164.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD--PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 359999999999999999999999999999999999986 2111389999999987431 124579999998877
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++ .||+||+.++....+... . +.....++.+++.+++........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKD----------K-----------------------ELIDQRVEESLKQAAIWKETKDNL- 141 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCC----------H-----------------------HHHHHHHHHHHHHcCCCcchHHHh-
Confidence 75 799999988643221100 0 001123456777888842110011
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
+...+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+|++
T Consensus 142 ~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 218 (251)
T PRK14251 142 DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH--Q-YTFIMVTHNLQQAGRISDQTAF 218 (251)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHHhhcCEEEE
Confidence 234457999999999999999999999999999999999999999999999843 4 4566678888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|+++..|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 219 LMNGDLIEAGPTEEMF 234 (251)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 458
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=319.39 Aligned_cols=218 Identities=20% Similarity=0.256 Sum_probs=172.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--c-eEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~--~-~~~G~i~i~g 902 (1425)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 378899988763 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKK-----QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+.. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8752 1234567999999988887 499999987653321 11 1233456677888887432111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC---
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1054 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~--- 1054 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 68899999999982
Q ss_pred -----CcEEEEECCC
Q 047682 1055 -----GGYEIYVGPL 1064 (1425)
Q Consensus 1055 -----Gg~~~y~G~~ 1064 (1425)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 3788999875
No 459
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4e-33 Score=317.82 Aligned_cols=214 Identities=26% Similarity=0.288 Sum_probs=171.9
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCcc--
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYP-- 904 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~-- 904 (1425)
++++|+++.++ .+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 77888887663 2358999999999999999999999999999999999765 347999999875
Q ss_pred ---CCc---c----cccceEEEeecCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-cccccc
Q 047682 905 ---KKQ---E----TFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-LRQSLV 971 (1425)
Q Consensus 905 ---~~~---~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~ 971 (1425)
... . ..++.++|++|++. +.+.+|+.|++.+..... . .......++.++++++.+++.+ ..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 321 1 12346899999974 446789999986542211 1 0111233456788999999963 55554
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEE
Q 047682 972 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1050 (1425)
Q Consensus 972 g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~ 1050 (1425)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4579999999999999999999999999999999999999999999998754 899999999986 5777899999
Q ss_pred EEeCCcEEEEECCC
Q 047682 1051 LMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1051 ~l~~Gg~~~y~G~~ 1064 (1425)
+|++ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9997 688888875
No 460
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.3e-33 Score=313.71 Aligned_cols=209 Identities=22% Similarity=0.352 Sum_probs=168.4
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
-++++|+++.++ ++.+++|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899987763 2469999999999999999999999999999999999754 3579999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCcCCH
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVSGLST 981 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 981 (1425)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 224567899999988876 4999999875433211 11 124467899999995 355554 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEE
Q 047682 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1060 (1425)
Q Consensus 982 GqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y 1060 (1425)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++ +.+|++++|++.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 899999999986 34 57999999963333344
Q ss_pred EC
Q 047682 1061 VG 1062 (1425)
Q Consensus 1061 ~G 1062 (1425)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 461
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.1e-33 Score=364.01 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=190.6
Q ss_pred HHhHHHHHHhhhhcccCHHHHHHHHHHHHhhcCCCCCceeEEEeeeEEEEEEecCCCCCCCchhhHHHHHHhHhhhhccc
Q 047682 48 LERQRLIDKLVKVADVDNEQLLLKLKNRVDRVGISLPEIEVRFEHLNVEAEAYVGGRALPTFFNFCANLIEGFLNCLHIL 127 (1425)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (1425)
++-+..++|+.++.+.+++... + +....+.....++++|+++.+..
T Consensus 422 ~~~~~~~~ri~~~l~~~~e~~~----~--~~~~~~~~~~~i~~~~vsf~y~~---------------------------- 467 (694)
T TIGR01846 422 QQTGIALERLGDILNSPTEPRS----A--GLAALPELRGAITFENIRFRYAP---------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHcCCCCccC----C--CCCCCCCCCCeEEEEEEEEEcCC----------------------------
Confidence 3555666777776665544100 0 00001111346889999887631
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHD 204 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 204 (1425)
.++++|+|+|++++||+.++|+|+||||||||+|+|+|.++|+ +|+|.+||+++++... ++.++||+|++
T Consensus 468 ----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~ 540 (694)
T TIGR01846 468 ----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQEN 540 (694)
T ss_pred ----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCC
Confidence 1234899999999999999999999999999999999999998 9999999999887653 57899999976
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.++ +.|++|||.++.. +.+.+.+.+++...+ .++.++ .|+...||.
T Consensus 541 ~lf-~~ti~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i~--~lp~gl~t~ 586 (694)
T TIGR01846 541 VLF-SRSIRDNIALCNP-------------------------GAPFEHVIHAAKLAG------AHDFIS--ELPQGYNTE 586 (694)
T ss_pred eeh-hhhHHHHHhcCCC-------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcCccCcE
Confidence 655 5699999987521 111222222221111 112222 356778999
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+|+.+ .+||||||||++|||||+.+|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|..+ ..+.||+|
T Consensus 587 i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~~-~~~~~d~i 661 (694)
T TIGR01846 587 VGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRLS-TVRACDRI 661 (694)
T ss_pred ecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCChH-HHHhCCEE
Confidence 99765 5799999999999999999999999999999999999999999999873 3556555 455554 45679999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|+++++|+++++++
T Consensus 662 i~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 662 IVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEeCCEEEEeCCHHHHHH
Confidence 9999999999999999864
No 462
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=349.72 Aligned_cols=206 Identities=25% Similarity=0.325 Sum_probs=173.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeecCCCCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ----ETFARISGYCEQNDIHSPNV 927 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~l 927 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999765 348999999987532 12345689999999888999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 047682 928 TVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1425)
Q Consensus 928 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEPTs 1007 (1425)
||+||+.+..........+.++.++.++++++.+++.+..+.. +..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211111112333445688999999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCC
Q 047682 1008 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGR 1066 (1425)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~ 1066 (1425)
|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 57788999999997 68899998654
No 463
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-33 Score=316.08 Aligned_cols=215 Identities=22% Similarity=0.295 Sum_probs=174.2
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--ce--EEEEEEEcC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNIKISG 902 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~--~~--~~G~i~i~g 902 (1425)
+.+++++++++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ |. +.|++.++|
T Consensus 11 i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 78888887663 34699999999999999999999999999999999997542 21 346666666
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCCCC
Q 047682 903 YPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP----LRQSLVGLPG 975 (1425)
Q Consensus 903 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~~~ 975 (1425)
.+... ...++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+ ..+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 65421 2345679999999999999999999988643221 1123344566889999999864 23332
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
+..||+|||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999864 699999999986 57788999999986
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 688888875
No 464
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-33 Score=366.00 Aligned_cols=208 Identities=27% Similarity=0.382 Sum_probs=175.9
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++|+++. +++.+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +.+|+|.+||.+.
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 6999999999841 23469999999999999999999999999999999999876 3589999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPL-------RQSLVGLPG 975 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 975 (1425)
++ ..+++.+|||+|++.+++ -|++||+.++. + .+++ .+.++++..++.+. .|+.+|..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~e----~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTLD----EAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCHH----HHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 457788999999998876 49999998642 1 2332 35677788777653 35556644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 4679999999999999999999999999999999999999999999886 589999999985 5678999999997
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 688999985
No 465
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.3e-33 Score=316.84 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=168.0
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHH
Q 047682 854 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVTVY 930 (1425)
Q Consensus 854 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 930 (1425)
+|+|+|+++++||+++|+||||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987542 22345689999998888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 047682 931 ESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1003 (1425)
Q Consensus 931 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~-------~p~illLD 1003 (1425)
||+.+.... ..+....++.++++++.++|.+..+.. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 122233345678999999998776665 35799999999999999998 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCC
Q 047682 1004 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1065 (1425)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~ 1065 (1425)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999986 57889999999996 6788888753
No 466
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=316.37 Aligned_cols=219 Identities=22% Similarity=0.278 Sum_probs=175.3
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-ceEEEEEEEcC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKISG 902 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~--~-~~~~G~i~i~g 902 (1425)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 467888887652 2469999999999999999999999999999999999642 1 12579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 903 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
.+... ...++.++|++|++.+++. |+.||+.+..... ...+.+..++.+.++++.+++.+....... ..+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIH--GEDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhc--CCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87532 1345679999999988875 9999998764322 111233345667888999988542211111 1256
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999986 68888999999986 68
Q ss_pred EEEECCC
Q 047682 1058 EIYVGPL 1064 (1425)
Q Consensus 1058 ~~y~G~~ 1064 (1425)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 8898875
No 467
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-33 Score=322.55 Aligned_cols=211 Identities=18% Similarity=0.284 Sum_probs=172.2
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++. +...+|+|+|++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3788999887741 22359999999999999999999999999999999999864 369999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCC------CCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGL------PGV 976 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~------~~~ 976 (1425)
.. ...++.++|++|++.+++. |++||+.... .... +.+.++++.+||.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 32 3456679999999998874 9999995321 1122 2357788889998765554321 134
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999985 34 45999999986 6
Q ss_pred EEEEECCCC
Q 047682 1057 YEIYVGPLG 1065 (1425)
Q Consensus 1057 ~~~y~G~~~ 1065 (1425)
+++++|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 889999873
No 468
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-34 Score=320.85 Aligned_cols=208 Identities=25% Similarity=0.384 Sum_probs=172.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+++++|++++++||+|+||||++++|-.+++++ +|.|+++|+++.+.. .++.||.|||+.. +++.
T Consensus 276 r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDtv-LFND 351 (497)
T COG5265 276 RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDTV-LFND 351 (497)
T ss_pred chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccce-ehhh
Confidence 46999999999999999999999999999999999999999 999999999987654 3578999999555 5577
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
|...|+.++.. +...++...++.. .+..+. .-.|++.+||.||+++.
T Consensus 352 ti~yni~ygr~-------------------------~at~eev~aaa~~-----aqi~~f---i~~lP~gy~t~Vgergl 398 (497)
T COG5265 352 TIAYNIKYGRP-------------------------DATAEEVGAAAEA-----AQIHDF---IQSLPEGYDTGVGERGL 398 (497)
T ss_pred hHHHHHhccCc-------------------------cccHHHHHHHHHH-----hhhhHH---HHhCchhhhcccchhee
Confidence 99999998732 2222222222211 111122 23589999999999998
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
+ |||||||||+|||+++.+|+||+|||.||+||+.|...|...|++... ++|+++. . |+..+.--+|.|++|++|
T Consensus 399 k-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~--~rttlvi-a-hrlsti~~adeiivl~~g 473 (497)
T COG5265 399 K-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSA--GRTTLVI-A-HRLSTIIDADEIIVLDNG 473 (497)
T ss_pred e-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhC--CCeEEEE-e-ehhhhccCCceEEEeeCC
Confidence 7 999999999999999999999999999999999999999999999864 6788773 3 344566679999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
+|++.|++++++.
T Consensus 474 ~i~erg~h~~ll~ 486 (497)
T COG5265 474 RIVERGTHEELLA 486 (497)
T ss_pred EEEecCcHHHHHH
Confidence 9999999999986
No 469
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=320.26 Aligned_cols=203 Identities=19% Similarity=0.349 Sum_probs=163.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcccEEEECCccCCCC-----CccceEEEEccCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLD-----PSLKLSGRVTYNGHNMDEF-----VPQRTAAYISQHD 204 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 204 (1425)
.+|+|+|++|++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 58999999999999999999999999999999999864 35 99999999887532 1246799999998
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD----VC 280 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 280 (1425)
.+++. ||+||+.++....+... . ......++.+++.+|+. +.
T Consensus 130 ~l~~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFPK-SIFDNIAYGPRLHGIND---------K------------------------KQLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCcc-CHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHhCCccchhhH
Confidence 77764 99999998643221100 0 00112345567777764 22
Q ss_pred ccccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 047682 281 ADTMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDL 360 (1425)
Q Consensus 281 ~~t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~ 360 (1425)
.+ ..+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|+.+++.++
T Consensus 176 ~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~ 247 (286)
T PRK14275 176 LD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRV 247 (286)
T ss_pred hh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHh
Confidence 33 33456999999999999999999999999999999999999999999998853 3 4566678888899999
Q ss_pred cCeEEEEcCCeEEEecChhHHH
Q 047682 361 FDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 361 ~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
+|++++|++|+++..|+.+++.
T Consensus 248 ~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 248 SDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988774
No 470
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=320.00 Aligned_cols=213 Identities=26% Similarity=0.380 Sum_probs=169.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCcccEEEECCccCCCCCc---cceEEEEccCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS-----LKLSGRVTYNGHNMDEFVP---QRTAAYISQHDV 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 205 (1425)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|+++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 45999999999999999999999999999999999999874 1137999999998764332 346899999877
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMV 285 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 285 (1425)
.++.+||+||+.++..... .... ... .+....++.+++.+||+...++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~--~~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHA--RRAG-------------ALT---------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhcccccc--cccc-------------cCC---------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 6677999999987531100 0000 000 001224567889999986655544
Q ss_pred cCcccccCChhhhhhHHHHHHHh---------cCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhh
Q 047682 286 GDEMLRGISGGQRKRVTTGEMLV---------GPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPE 356 (1425)
Q Consensus 286 g~~~~~~LSGGqrqRvsia~al~---------~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~ 356 (1425)
..|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++.+..+ ++++.++|+..+
T Consensus 144 -----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~ 217 (272)
T PRK13547 144 -----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNL 217 (272)
T ss_pred -----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHH
Confidence 469999999999999999 59999999999999999999999999999865434 445557888888
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 047682 357 TYDLFDDIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 357 ~~~~~D~vilL~~G~iv~~G~~~~~~ 382 (1425)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 98999999999999999999988763
No 471
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.6e-33 Score=314.42 Aligned_cols=209 Identities=26% Similarity=0.385 Sum_probs=166.4
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++. .++.+|+|+|++|++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 667787776521 12459999999999999999999999999999999999765 34799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccC------CCCCC
Q 047682 907 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVG------LPGVS 977 (1425)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~ 977 (1425)
. ...++.++|++|++.+++ .|+.|++.+... ... ++.+.++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223557899999988776 699999976321 111 1235677888888776655321 11245
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 89999999986 3 479999999997 56
Q ss_pred EEEEC
Q 047682 1058 EIYVG 1062 (1425)
Q Consensus 1058 ~~y~G 1062 (1425)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 66654
No 472
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=318.82 Aligned_cols=211 Identities=18% Similarity=0.276 Sum_probs=168.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCC
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHD 204 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 204 (1425)
+++.+|+|+|++++|||+++|+||||||||||+++|+|.++|.. ..+|+|+++|+++... ..++.++|++|++
T Consensus 19 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 98 (261)
T PRK14263 19 GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQP 98 (261)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCC
Confidence 34569999999999999999999999999999999999997610 1389999999987532 1246799999987
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
..+ .+|++||+.++....+.. .+....++.+++.+||.+..+..
T Consensus 99 ~~~-~~tv~enl~~~~~~~~~~-----------------------------------~~~~~~~~~~l~~~~l~~~i~~~ 142 (261)
T PRK14263 99 NPF-SMSIFDNVAFGLRLNRYK-----------------------------------GDLGDRVKHALQGAALWDEVKDK 142 (261)
T ss_pred ccc-cccHHHHHHHHHhhcCch-----------------------------------HHHHHHHHHHHHHcCCchhhhhh
Confidence 766 699999999875422100 00112356677888885433222
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. +...+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~--~-~tii~isH~~~~i~~~~d~v 218 (261)
T PRK14263 143 L-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK--D-YTIALVTHNMQQAIRVADTT 218 (261)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEE
Confidence 2 234567999999999999999999999999999999999999999999999842 4 45666788888899999999
Q ss_pred EEEc--------CCeEEEecChhHHH
Q 047682 365 ILIS--------EGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~--------~G~iv~~G~~~~~~ 382 (1425)
++|+ +|++++.|+.+++.
T Consensus 219 ~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 219 AFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEEecccccccCCceEEEeCCHHHHH
Confidence 9996 89999999988774
No 473
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-33 Score=314.33 Aligned_cols=219 Identities=19% Similarity=0.259 Sum_probs=175.2
Q ss_pred ceEEEecceeeeecch----hhhh--ccc-cCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEE
Q 047682 825 LSLTFEDVVYSVDMPQ----EMKL--QGV-LDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGN 897 (1425)
Q Consensus 825 ~~l~~~~~~~~~~~~~----~~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~ 897 (1425)
+++..+|++..+.... ..+. .+. ....+.+|+|+|++|++||++||+||||||||||+++|+|..+ +..|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 4677777765554321 1111 011 1234679999999999999999999999999999999999765 34799
Q ss_pred EEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 047682 898 IKISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVS 977 (1425)
Q Consensus 898 i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 977 (1425)
|.++|. ++++.|+..+.+.+|+.||+.+..... ..+.++..+.++++++.+++.+..+.. +.
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VK 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cc
Confidence 999984 356777777778899999998754332 223444455677888888998776664 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcE
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1057 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~ 1057 (1425)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999986 57788999999986 67
Q ss_pred EEEECCCC
Q 047682 1058 EIYVGPLG 1065 (1425)
Q Consensus 1058 ~~y~G~~~ 1065 (1425)
++..|+..
T Consensus 221 i~~~g~~~ 228 (264)
T PRK13546 221 LKDYGELD 228 (264)
T ss_pred EEEeCCHH
Confidence 88888864
No 474
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2e-33 Score=306.02 Aligned_cols=178 Identities=26% Similarity=0.332 Sum_probs=150.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc-----ccccceEEEeecCCC-CCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ-----ETFARISGYCEQNDI-HSP 925 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 925 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999765 348999999987531 123567899999973 333
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 047682 926 NVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1425)
Q Consensus 926 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDEP 1005 (1425)
..||+||+.+..... ..+.++.++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865422 223344455678999999998777765 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 047682 1006 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1039 (1425)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1039 (1425)
|+|||+.++..+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 475
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.2e-33 Score=329.44 Aligned_cols=211 Identities=28% Similarity=0.375 Sum_probs=178.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccC--CCC---CccceEEEEccC--C
Q 047682 132 KKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNM--DEF---VPQRTAAYISQH--D 204 (1425)
Q Consensus 132 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~--~~~---~~~~~~~yv~Q~--d 204 (1425)
+...+++||||.+++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+. +.. ..++.+-+|+|+ .
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4567999999999999999999999999999999999999998 99999999872 111 123567788887 4
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
.+.|.+||+++|.......+... ..+...+++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 78999999999987655432110 11223468889999999842
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
..++++..|||||||||+|||||+.+|+++++|||||.||+.++.+|.+.|+++.++.+ .+.+.|+|+..-+..+||||
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g-~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELG-LTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHhhCceE
Confidence 44577788999999999999999999999999999999999999999999999988765 55566899999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|+||+.||.+++.+
T Consensus 501 ~vm~~G~iVE~G~~~~v~~ 519 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVFE 519 (539)
T ss_pred EEEECCeEEEeCCHHHHhc
Confidence 9999999999999998853
No 476
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.9e-33 Score=315.86 Aligned_cols=206 Identities=27% Similarity=0.416 Sum_probs=158.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 210 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 35899999999999999999999999999999999999998 999999998775432 245799999987665 57
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHh--CCcccccccccCc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVL--GLDVCADTMVGDE 288 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~t~vg~~ 288 (1425)
||+||+.+... . ...+... .... ....+..++.+ +++...+ +
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~---------------------~~~~------~~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVI---------------------EAAK------LAGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHH---------------------HHHH------HcCcHHHHHhCcccccchhh-----c
Confidence 99999987431 0 0000000 0000 00112344444 4443333 2
Q ss_pred ccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEc
Q 047682 289 MLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILIS 368 (1425)
Q Consensus 289 ~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 368 (1425)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.| |+.++|+.+++ +.+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~t-iii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--GRT-VIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--CCE-EEEEeCCHHHH-HhCCEEEEEE
Confidence 3456999999999999999999999999999999999999999999999842 445 55566777777 5699999999
Q ss_pred CCeEEEecChhHHHH
Q 047682 369 EGQIVFQGPREHVLE 383 (1425)
Q Consensus 369 ~G~iv~~G~~~~~~~ 383 (1425)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887753
No 477
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.4e-33 Score=359.28 Aligned_cols=208 Identities=25% Similarity=0.431 Sum_probs=166.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|+.+++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++. +++.|
T Consensus 346 ~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~-lf~~T 421 (571)
T TIGR02203 346 PALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVV-LFNDT 421 (571)
T ss_pred ccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCcc-ccccc
Confidence 5899999999999999999999999999999999999998 9999999999876653 467999999765 55679
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++|||.++... +.+.+++.+++...+ .++.++ .|++..||.+|+.+ +
T Consensus 422 i~~Ni~~~~~~------------------------~~~~~~i~~~l~~~~------l~~~i~--~lp~gldt~i~~~g-~ 468 (571)
T TIGR02203 422 IANNIAYGRTE------------------------QADRAEIERALAAAY------AQDFVD--KLPLGLDTPIGENG-V 468 (571)
T ss_pred HHHHHhcCCCC------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcCcccceecCCC-C
Confidence 99999976310 111122222211110 111121 35667899999875 5
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++||||++.+|++++||||||+||..++..|.+.|++..+ ++|+|++ +|+. +..+.||+|++|++|+
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~--~~tiIii-tH~~-~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ--GRTTLVI-AHRL-STIEKADRIVVMDDGR 544 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhC--CCEEEEE-ehhh-HHHHhCCEEEEEeCCE
Confidence 6999999999999999999999999999999999999999999998642 5666664 4443 5678899999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
++..|+++++.+
T Consensus 545 i~~~g~~~~l~~ 556 (571)
T TIGR02203 545 IVERGTHNELLA 556 (571)
T ss_pred EEeeCCHHHHHH
Confidence 999999999864
No 478
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=317.55 Aligned_cols=208 Identities=23% Similarity=0.330 Sum_probs=165.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 359999999999999999999999999999999999987631 1379999999987532 124579999999888
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD----VCAD 282 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~ 282 (1425)
++.+|++||+.++....+... . ++.....+..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD----------R-----------------------DHLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC----------H-----------------------HHHHHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987643211000 0 00111233445555543 2233
Q ss_pred ccccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcC
Q 047682 283 TMVGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFD 362 (1425)
Q Consensus 283 t~vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D 362 (1425)
+. ++.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++++.++|+..++.+.+|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 33 456999999999999999999999999999999999999999999999853 4 555667888889999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 047682 363 DIILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 363 ~vilL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988874
No 479
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-34 Score=319.16 Aligned_cols=195 Identities=26% Similarity=0.329 Sum_probs=155.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCH
Q 047682 853 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVTV 929 (1425)
Q Consensus 853 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 929 (1425)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 58999999999999999999999999999999999865 357999999976432 234567899999988776 699
Q ss_pred HHHHHHHhhccCCCCCCHHHHHH-----HHHHHHHHc--CCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEE
Q 047682 930 YESLLYSAWLRLPPDVDSETRRM-----FLEEIMELV--ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1002 (1425)
Q Consensus 930 ~E~l~~~~~lr~~~~~~~~~~~~-----~v~~~l~~l--~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illL 1002 (1425)
+||+.+... ........+ .+++.++.+ ++.+..+.. +..||||||||++||++|+.+|++|+|
T Consensus 93 ~enl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRP-----GATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999976432 111111111 234444444 444444332 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1003 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1003 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++. .+|++++|++ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~-~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TIE-NADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HHh-hCCEEEEecC-CeEeeeCCH
Confidence 999999999999999999999864 899999999996 454 5999999997 577888764
No 480
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-33 Score=308.78 Aligned_cols=198 Identities=29% Similarity=0.388 Sum_probs=164.4
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|++..++ ++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67788877652 2469999999999999999999999999999999999765 34799999997643
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHH
Q 047682 907 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKR 986 (1425)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqR 986 (1425)
....++.++|++|++.+++.+|+.||+.+....+ ... ++.++++++.+||.+..+.. ...||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFL---GGE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhc---CCc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHH
Confidence 2225567899999988888999999998755332 111 12378899999998766655 34799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeC
Q 047682 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1054 (1425)
Q Consensus 987 l~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~ 1054 (1425)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++. . |+++.++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~~ 200 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLGP 200 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeecC
Confidence 99999999999999999999999999999999999998878999999999985 344 3 88887753
No 481
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.4e-33 Score=314.84 Aligned_cols=219 Identities=26% Similarity=0.304 Sum_probs=170.3
Q ss_pred EEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCC
Q 047682 827 LTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKK 906 (1425)
Q Consensus 827 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~ 906 (1425)
++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56778877663 24699999999999999999999999999999999997321135799999998753
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHHhh-ccC--C-CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 047682 907 QE---T-FARISGYCEQNDIHSPNVTVYESLLYSAW-LRL--P-PDVDSETRRMFLEEIMELVELN-PLRQSLVGLPGVS 977 (1425)
Q Consensus 907 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~-lr~--~-~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 977 (1425)
.. . .++.++|++|++.+++.+|+.+++.+... ++. . .........+++++.++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 23468999999988888887777643211 110 0 0112223345678889999984 3444432 12
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEeCCc
Q 047682 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1056 (1425)
Q Consensus 978 ~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fD~v~~l~~Gg 1056 (1425)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 35554 899999986 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 78899875
No 482
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-33 Score=315.07 Aligned_cols=211 Identities=20% Similarity=0.298 Sum_probs=165.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 206 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 206 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 35899999999999999999999999999999999987531 11389999999987543 124579999999887
Q ss_pred CCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 047682 207 IGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVG 286 (1425)
Q Consensus 207 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 286 (1425)
++. ||+||+.++.+..+... . ......++.+++.+++.+...+..
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKN---------K------------------------KTLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCC---------H------------------------HHHHHHHHHHHHHhcCchhhHHHh-
Confidence 774 99999998754321100 0 001123455677777743211111
Q ss_pred CcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEE
Q 047682 287 DEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIIL 366 (1425)
Q Consensus 287 ~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 366 (1425)
++..+.||||||||++|||+++.+|++++|||||+|||..++..+.+.|+++.+ + .+++.++|+.+++.+.+|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 234456999999999999999999999999999999999999999999998854 3 4555578888889999999999
Q ss_pred EcCCeEEEecChhHHH
Q 047682 367 ISEGQIVFQGPREHVL 382 (1425)
Q Consensus 367 L~~G~iv~~G~~~~~~ 382 (1425)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999988764
No 483
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.2e-33 Score=302.68 Aligned_cols=170 Identities=39% Similarity=0.666 Sum_probs=148.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcccEEEECCccCCCCCccceEEEEccCCCCCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKL--DPSLKLSGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 211 (1425)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++..++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998765434577999999988889999
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++||+.++.++ +
T Consensus 99 ~~~~i~~~~~~-----------------------------------------------------------~--------- 110 (194)
T cd03213 99 VRETLMFAAKL-----------------------------------------------------------R--------- 110 (194)
T ss_pred HHHHHHHHHHh-----------------------------------------------------------c---------
Confidence 99999864210 0
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecCh-hhHHhhcCeEEEEcCC
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPA-PETYDLFDDIILISEG 370 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~-~~~~~~~D~vilL~~G 370 (1425)
.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++.+ .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999999854 3556555 45555 4788899999999999
Q ss_pred eEEEec
Q 047682 371 QIVFQG 376 (1425)
Q Consensus 371 ~iv~~G 376 (1425)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998764
No 484
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=316.58 Aligned_cols=210 Identities=20% Similarity=0.279 Sum_probs=164.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|+++++||+++|+|+||||||||+|+|+|.++++. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 58999999999999999999999999999999999987531 1389999999987431 1235799999998777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ +||+||+.++....+.. ++ .+....++.+++.+|+....... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~-------------------~~--------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKL-------------------PQ--------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCC-------------------CH--------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 6 89999998864322100 00 01122345667777774211111 12
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..++.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ + .+++.++|+.+++.+++|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 34457999999999999999999999999999999999999999999999853 4 45555788999999999999999
Q ss_pred c-----CCeEEEecChhHHH
Q 047682 368 S-----EGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~-----~G~iv~~G~~~~~~ 382 (1425)
+ +|+++++|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 7 59999999998874
No 485
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.23 Aligned_cols=212 Identities=21% Similarity=0.306 Sum_probs=168.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +..+|+|.++|+++... ..++.++|++|+..++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 5899999999999999999999999999999999999874 12479999999886421 1245799999987777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ +||+||+.++....+.. +. .+....+..+++.+++.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~-------------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWR-------------------PK--------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCC-------------------cH--------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 89999998864321100 00 001123566788888754221111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
+.+..||||||||++|||+|+.+|++++|||||+|||..+...+.+.|++++...+ ++|+.++|+..++.++||+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999999865434 45555788889999999999999
Q ss_pred cC-----CeEEEecChhHHH
Q 047682 368 SE-----GQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~-----G~iv~~G~~~~~~ 382 (1425)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 486
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=319.86 Aligned_cols=211 Identities=24% Similarity=0.320 Sum_probs=168.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCCC----ccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEFV----PQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 207 (1425)
+++|+|+|++|++||+++|+||||||||||+++|+|+++|. ...+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 45999999999999999999999999999999999998751 012899999999875431 246799999988777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ .||+||+.++........ . .+....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP---------R------------------------KEFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 899999987643211000 0 011123456778888865432222 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..++.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998854 3 45566788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 487
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=316.97 Aligned_cols=210 Identities=19% Similarity=0.305 Sum_probs=165.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPS--LKLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++..+
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5899999999999999999999999999999999998741 01289999999987531 1246799999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+. ||+||+.++....+... + ...+..++++++.+++.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R-------------------------------RVLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 99999988654321100 0 001123456677778753211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
...+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +. +++.++|+..++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~-tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--KY-TIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHhhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999854 44 4555788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+++++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 488
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-34 Score=291.53 Aligned_cols=215 Identities=24% Similarity=0.357 Sum_probs=184.8
Q ss_pred cCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCcc---ceEEEEccCC
Q 047682 128 PSRKKKFTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVPQ---RTAAYISQHD 204 (1425)
Q Consensus 128 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d 204 (1425)
+++.+++.+|+|+|..|++|.+|+++|||||||||||.+++++++.+ +|+|+++|+++.....+ +.++..-|+.
T Consensus 8 ~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N 84 (252)
T COG4604 8 SKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQEN 84 (252)
T ss_pred hHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhc
Confidence 34456678999999999999999999999999999999999999998 99999999999776543 6788999988
Q ss_pred CCCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 047682 205 VHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTM 284 (1425)
Q Consensus 205 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 284 (1425)
..-..+||||-+.||. +.....| + ..+.+..+++.++-|+|++..|..
T Consensus 85 ~i~~rlTV~dLv~FGR-fPYSqGR-----------------l--------------t~eD~~~I~~aieyl~L~~l~dry 132 (252)
T COG4604 85 HINSRLTVRDLVGFGR-FPYSQGR-----------------L--------------TKEDRRIINEAIEYLHLEDLSDRY 132 (252)
T ss_pred hhhheeEHHHHhhcCC-CcccCCC-----------------C--------------chHHHHHHHHHHHHhcccchHHHh
Confidence 8888999999999983 2111000 0 012244678889999999887755
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
. ..||||||||.-||..++.+.+.++||||.+.||-..+.++++.|++++++.++|+|+ +.|+-.....++|+|
T Consensus 133 L-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~I 206 (252)
T COG4604 133 L-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHI 206 (252)
T ss_pred H-----HhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhhe
Confidence 5 4699999999999999999999999999999999999999999999999999888877 567888888999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
+-|.+|+++.+|+++++.+
T Consensus 207 VAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 207 VALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeecCCEEEecCCHHHhcC
Confidence 9999999999999999863
No 489
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=318.51 Aligned_cols=208 Identities=21% Similarity=0.299 Sum_probs=161.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCCC-----CccceEEEEccCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDEF-----VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 207 (1425)
++|+|+|++|++||+++|+||||||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|+...+
T Consensus 34 ~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~ 113 (274)
T PRK14265 34 LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPF 113 (274)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccc
Confidence 58999999999999999999999999999999999986311 1389999999887431 1246799999987777
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+. ||.||+.++....+... . .+...+..++.+++........ +
T Consensus 114 ~~-tv~~nl~~~~~~~~~~~---------------------~--------------~~~~~~~~l~~~~l~~~l~~~~-~ 156 (274)
T PRK14265 114 PK-SIYENIAFAPRANGYKG---------------------N--------------LDELVEDSLRRAAIWEEVKDKL-K 156 (274)
T ss_pred cc-cHHHHHHhHHHhcCchH---------------------H--------------HHHHHHHHHHHcccchhhHHHh-c
Confidence 64 99999988643211000 0 0011234556666532111111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
..+..|||||||||+|||||+.+|+++||||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 157 ~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 233 (274)
T PRK14265 157 EKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE--Q-YTIIMVTHNMQQASRVADWTAFF 233 (274)
T ss_pred CCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999853 4 45666789999999999999999
Q ss_pred c---------CCeEEEecChhHHH
Q 047682 368 S---------EGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~---------~G~iv~~G~~~~~~ 382 (1425)
+ +|++++.|+.+++.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~~~~ 257 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTEQMF 257 (274)
T ss_pred ecccccccccCceEEEeCCHHHHH
Confidence 7 89999999998874
No 490
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-34 Score=304.05 Aligned_cols=197 Identities=26% Similarity=0.418 Sum_probs=171.7
Q ss_pred eceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC-------ccceEEEEccCCCCCCCC
Q 047682 138 KDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV-------PQRTAAYISQHDVHIGEM 210 (1425)
Q Consensus 138 ~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~l 210 (1425)
=++++..+.--+|||-|+||||||||+|+|+|+.+|+ +|.|.+||..+.+.. .+|++|||+|+-.+||.+
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3577777765899999999999999999999999999 999999998764422 248899999999999999
Q ss_pred CHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 047682 211 TVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEML 290 (1425)
Q Consensus 211 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 290 (1425)
||+.||.|+.... .....|.+.+.||+++..+.+ +
T Consensus 92 tVrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P 126 (352)
T COG4148 92 TVRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----P 126 (352)
T ss_pred EEecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----C
Confidence 9999999985321 011246788999999988755 4
Q ss_pred ccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCC
Q 047682 291 RGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEG 370 (1425)
Q Consensus 291 ~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 370 (1425)
..|||||||||+|||||++.|++|+||||.+.||-....+|+-.|+++.++. +.-|+.++|...|+.+++|+|++|++|
T Consensus 127 ~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 127 GTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred CccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCC
Confidence 5699999999999999999999999999999999999999999999998765 456677899999999999999999999
Q ss_pred eEEEecChhHHHH
Q 047682 371 QIVFQGPREHVLE 383 (1425)
Q Consensus 371 ~iv~~G~~~~~~~ 383 (1425)
++...|+.+++.+
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999998853
No 491
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=316.82 Aligned_cols=211 Identities=21% Similarity=0.315 Sum_probs=164.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcccEEEECCccCCC-C---CccceEEEEccCCCCC
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSL--KLSGRVTYNGHNMDE-F---VPQRTAAYISQHDVHI 207 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 207 (1425)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+|.. ..+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 459999999999999999999999999999999999987520 128999999988742 1 1246799999998877
Q ss_pred CCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 047682 208 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGD 287 (1425)
Q Consensus 208 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 287 (1425)
+ .||+||+.++....+... + ......+++.++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKD---------K------------------------KVLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCc---------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 899999988643211000 0 001123445667777653211111 2
Q ss_pred cccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEE
Q 047682 288 EMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILI 367 (1425)
Q Consensus 288 ~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 367 (1425)
.....|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999854 4 45555788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 047682 368 SEGQIVFQGPREHVL 382 (1425)
Q Consensus 368 ~~G~iv~~G~~~~~~ 382 (1425)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 218 LMGELVEHDDTQVIF 232 (249)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 492
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-33 Score=301.45 Aligned_cols=170 Identities=29% Similarity=0.424 Sum_probs=148.8
Q ss_pred EEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc
Q 047682 828 TFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ 907 (1425)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 907 (1425)
+++|+++.++ ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4667766552 2469999999999999999999999999999999999765 358999999987532
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHH
Q 047682 908 -----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTE 982 (1425)
Q Consensus 908 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 982 (1425)
...++.++|++|++.+++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987532 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 983 qrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999986 566789999999875
No 493
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.8e-33 Score=318.74 Aligned_cols=198 Identities=22% Similarity=0.237 Sum_probs=159.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCC---ccceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 211 (1425)
.+|+|+|+.|++||+++|+||||||||||+++|+|+++ . +|+|.++|.++.... .++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 48999999999999999999999999999999999997 5 899999999886543 2467999999988776 59
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-------cccccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-------VCADTM 284 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-------~~~~t~ 284 (1425)
|+||+...... . . + .+...++.+||. ...++.
T Consensus 93 v~~nl~~~~~~----~-~---------------------~---------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGKW----S-D---------------------E---------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccCC----C-H---------------------H---------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 99999632100 0 0 0 011223334443 445667
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
+++ ....||||||||++||||++.+|++++|||||+|||+.+...+.+.|++.. .+ ++|+.++|+.+++. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--AD-CTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--CC-CEEEEEECCHHHHH-hCCEE
Confidence 765 456799999999999999999999999999999999999999999999763 24 45555777776665 59999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 047682 365 ILISEGQIVFQGPREHVLE 383 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~~ 383 (1425)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 494
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=6e-33 Score=314.78 Aligned_cols=201 Identities=26% Similarity=0.393 Sum_probs=167.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCCH
Q 047682 136 ILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTV 212 (1425)
Q Consensus 136 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 212 (1425)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999984 3 8999999998765432 2468999999888889999
Q ss_pred HHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 047682 213 RETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLRG 292 (1425)
Q Consensus 213 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 292 (1425)
+||+.+.... +. . . .+....++++++.+||++..++.+ +.
T Consensus 87 ~~nl~~~~~~-~~-~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPD-KT-R---------T------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCcc-CC-C---------c------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 9999875211 00 0 0 001234567889999987666555 45
Q ss_pred CChhhhhhHHHHHHHhc-------CCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEE
Q 047682 293 ISGGQRKRVTTGEMLVG-------PALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDII 365 (1425)
Q Consensus 293 LSGGqrqRvsia~al~~-------~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 365 (1425)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++.+ . +++++.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999999864 3 4456667888889999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 047682 366 LISEGQIVFQGPREHVL 382 (1425)
Q Consensus 366 lL~~G~iv~~G~~~~~~ 382 (1425)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987763
No 495
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=356.08 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=176.7
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 6999999998841 234699999999999999999999999999999999998663 479999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccCCCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNP-------LRQSLVGLPG 975 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 975 (1425)
++ ..+++.++|++|++.+++ -|++||+.++. +.+.+++ .++++++..++.+ -.|+.+|..
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~~----~i~~al~~~~l~~~i~~lp~Gldt~ig~~- 477 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSRE----QIEEAARMAYAMDFINKMDNGLDTVIGEN- 477 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCHH----HHHHHHHHhCcHHHHHhcccccCceeCCC-
Confidence 53 456788999999998886 59999997641 2223333 3566677766543 246667754
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCC
Q 047682 976 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1055 (1425)
Q Consensus 976 ~~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~G 1055 (1425)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~- 553 (582)
T PRK11176 478 GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED- 553 (582)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 36799999999999999999999999999999999999999999999875 4799999999984 5778999999996
Q ss_pred cEEEEECCC
Q 047682 1056 GYEIYVGPL 1064 (1425)
Q Consensus 1056 g~~~y~G~~ 1064 (1425)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 688998884
No 496
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.5e-33 Score=318.50 Aligned_cols=196 Identities=29% Similarity=0.415 Sum_probs=153.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCC
Q 047682 852 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPNVT 928 (1425)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 928 (1425)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999765 347999999976532 223456999999988776 69
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcccccc-------ccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEE
Q 047682 929 VYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQS-------LVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1001 (1425)
Q Consensus 929 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~~~~lSgGqrqRl~ia~~L~~~p~ill 1001 (1425)
|+|++.+.... ...+. ..+.++..++.+..+. ... ..+..||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764321 11111 2233333333222111 111 1246799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCC
Q 047682 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1064 (1425)
Q Consensus 1002 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~ 1064 (1425)
|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++ +.||++++|++ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999986 35 48999999997 578888875
No 497
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=292.70 Aligned_cols=205 Identities=25% Similarity=0.391 Sum_probs=178.5
Q ss_pred CceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeecCCCCCCC
Q 047682 850 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPKKQ---ETFARISGYCEQNDIHSPN 926 (1425)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 926 (1425)
+.+.+|+|+|..|++|.+++++|||||||||||.++++... ..+|+|.++|.+... +..++..+..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45789999999999999999999999999999999998655 358999999998643 3456677888898888889
Q ss_pred CCHHHHHHHHhhccCCC--CCCHHHHHHHHHHHHHHcCCccccccccCCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 047682 927 VTVYESLLYSAWLRLPP--DVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1425)
Q Consensus 927 lTv~E~l~~~~~lr~~~--~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqrqRl~ia~~L~~~p~illLDE 1004 (1425)
+||+|-+.|+. .|. +...++.+..+++.++.++|+++.|.. ..+||||||||.-||+.|+.+.+.++|||
T Consensus 90 lTV~dLv~FGR---fPYSqGRlt~eD~~~I~~aieyl~L~~l~dry-----Ld~LSGGQrQRAfIAMVlaQdTdyvlLDE 161 (252)
T COG4604 90 LTVRDLVGFGR---FPYSQGRLTKEDRRIINEAIEYLHLEDLSDRY-----LDELSGGQRQRAFIAMVLAQDTDYVLLDE 161 (252)
T ss_pred eEHHHHhhcCC---CcccCCCCchHHHHHHHHHHHHhcccchHHHh-----HHhcccchhhhhhhheeeeccCcEEEecC
Confidence 99999999863 332 233345567799999999999999987 45799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEeCCcEEEEECCCCC
Q 047682 1005 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGR 1066 (1425)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg~~~y~G~~~~ 1066 (1425)
|.++||-..+..+|+.||+++++ |+|||++.||... ...+.|+|+-|++ |+++..|++++
T Consensus 162 PLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 162 PLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 99999999999999999999977 9999999999875 4567899999997 69999999853
No 498
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=7e-33 Score=351.44 Aligned_cols=207 Identities=21% Similarity=0.349 Sum_probs=164.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 047682 135 TILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 211 (1425)
Q Consensus 135 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 211 (1425)
++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.++ +.|
T Consensus 349 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf-~~t 424 (585)
T TIGR01192 349 QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDAGLF-NRS 424 (585)
T ss_pred ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCCccC-ccc
Confidence 4899999999999999999999999999999999999998 9999999998876543 47899999987655 579
Q ss_pred HHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 047682 212 VRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLDVCADTMVGDEMLR 291 (1425)
Q Consensus 212 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 291 (1425)
++||+.++... .+.++..+++...+ .+..+ ..+++..||.+|+.+ .
T Consensus 425 i~~Ni~~~~~~-------------------------~~~~~~~~a~~~~~------~~~~i--~~l~~g~~t~~~~~~-~ 470 (585)
T TIGR01192 425 IRENIRLGREG-------------------------ATDEEVYEAAKAAA------AHDFI--LKRSNGYDTLVGERG-N 470 (585)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhC------cHHHH--HhccccccchhcCCC-C
Confidence 99999885311 11111112111100 01111 235666789998754 4
Q ss_pred cCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeEEEEcCCe
Q 047682 292 GISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDIILISEGQ 371 (1425)
Q Consensus 292 ~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 371 (1425)
.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++. .++|+|+ ++|+.+.+ +.+|+|++|++|+
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~~-~~~d~i~~l~~G~ 546 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLSTV-RNADLVLFLDQGR 546 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHHH-HcCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998863 2556555 55555454 6799999999999
Q ss_pred EEEecChhHHHH
Q 047682 372 IVFQGPREHVLE 383 (1425)
Q Consensus 372 iv~~G~~~~~~~ 383 (1425)
+++.|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (585)
T TIGR01192 547 LIEKGSFQELIQ 558 (585)
T ss_pred EEEECCHHHHHH
Confidence 999999998864
No 499
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.4e-33 Score=317.07 Aligned_cols=207 Identities=25% Similarity=0.323 Sum_probs=169.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcccEEEECCccCCCCCc------cceEEEEccCC--C
Q 047682 134 FTILKDVNGIVKPSRLTLLLGPPASGKTTLLLALAGKLDPSLKLSGRVTYNGHNMDEFVP------QRTAAYISQHD--V 205 (1425)
Q Consensus 134 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 205 (1425)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999988 9999999998765432 45799999986 3
Q ss_pred CCCCCCHHHHHHhhhhhcCCCCcchhhhHhhHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 047682 206 HIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKDANIKPDPDIDVFMKALATEGQEASVVTDYVIKVLGLD-VCADTM 284 (1425)
Q Consensus 206 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 284 (1425)
+.+..|++|++.+...... ... ..+....++.+++.+|+. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~---------~~~------------------------~~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL---------SLD------------------------KAERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc---------cCC------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 5678999999976432100 000 001123467788899996 345544
Q ss_pred ccCcccccCChhhhhhHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhcCeE
Q 047682 285 VGDEMLRGISGGQRKRVTTGEMLVGPALALFMDEISTGLDSSTTFQIVTSLRQIIHILNGTAVISLLQPAPETYDLFDDI 364 (1425)
Q Consensus 285 vg~~~~~~LSGGqrqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 364 (1425)
.+.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++++.. +++++.++|+..++.+++|++
T Consensus 149 -----~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiiivsH~~~~i~~~~d~i 222 (268)
T PRK10419 149 -----PPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQF-GTACLFITHDLRLVERFCQRV 222 (268)
T ss_pred -----CccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHc-CcEEEEEECCHHHHHHhCCEE
Confidence 34699999999999999999999999999999999999999999999986543 455555788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 047682 365 ILISEGQIVFQGPREHVL 382 (1425)
Q Consensus 365 ilL~~G~iv~~G~~~~~~ 382 (1425)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999988764
No 500
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=316.06 Aligned_cols=211 Identities=25% Similarity=0.384 Sum_probs=164.5
Q ss_pred eEEEecceeeeecchhhhhccccCCceeeeeceeEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCceEEEEEEEcCccC
Q 047682 826 SLTFEDVVYSVDMPQEMKLQGVLDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKISGYPK 905 (1425)
Q Consensus 826 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~l~g~~~~~~~~G~i~i~g~~~ 905 (1425)
.++++|+++.++ +.+.+++|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 367888887663 12359999999999999999999999999999999999765 3479999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCcccccccc-C-----CCCC
Q 047682 906 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLV-G-----LPGV 976 (1425)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~-g-----~~~~ 976 (1425)
.. ..+++.++|++|++.+++. |++||+.+... .... ..+++.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999887775 99999976421 1111 12344455555443332211 0 1124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEeCCc
Q 047682 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1056 (1425)
Q Consensus 977 ~~lSgGqrqRl~ia~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fD~v~~l~~Gg 1056 (1425)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999986 34 56999999997 6
Q ss_pred EEEEECCC
Q 047682 1057 YEIYVGPL 1064 (1425)
Q Consensus 1057 ~~~y~G~~ 1064 (1425)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 77887764
Done!