Your job contains 1 sequence.
>047690
MIFSKLGRCLTRSSSRSNSLLYGGGVRSAIVGGGIPRLPRVTDGLVDGRLGVLRGYLAAI
GAKNESNLWDLNHVLANPGIYRFFSSESPKNKKNFENFYPKEKKEIPKEDEQKSESKEDS
NTDDHGNFQDTFMKQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDH
IVVSNKSVAKVFVRSSPHNQTIEDDFHGPVSGTPSKGHGGQYKYYFNIGSVEAFEEKLEE
AQETLGIDPHDFVPVTYVSEMVWYNELMRFAPTLLLLGTLMYMGRRMQGGLGVGGSGGKG
ARGIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPK
GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS
IIFIDEIDAIGRARGRGGFSGANDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDK
ALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIAN
VCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW
FLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKI
STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVRE
WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQ
GFEEEEKSSAPPETGTVDDGSSPLEPQVAPA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047690
(811 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 2800 1.4e-291 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 2766 5.8e-288 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 1520 1.6e-163 3
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 1435 5.4e-160 4
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 1427 1.3e-158 2
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1488 6.2e-157 2
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1483 1.6e-156 2
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 1486 2.1e-156 2
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 1483 3.4e-156 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 1484 5.5e-156 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 1399 1.1e-155 2
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 1425 6.9e-155 3
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 1459 2.1e-154 2
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 1458 2.7e-154 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 1415 4.5e-152 2
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 1404 2.1e-151 3
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 1437 8.3e-151 2
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 1429 8.3e-151 2
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 1424 2.8e-150 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 1370 7.9e-150 3
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 1408 1.2e-149 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 799 9.8e-146 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 799 9.8e-146 2
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 1406 7.5e-144 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 1359 1.6e-143 2
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 1229 8.8e-130 2
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 1219 8.0e-127 2
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 1200 1.3e-126 2
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 1243 1.4e-126 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 1201 5.6e-126 2
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 1186 8.1e-125 2
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 1182 1.7e-124 2
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 1179 1.2e-123 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1131 9.7e-118 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1114 6.6e-113 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1114 6.6e-113 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 632 3.1e-112 3
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 632 3.1e-112 3
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1104 7.6e-112 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 1066 8.1e-108 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1064 1.3e-107 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1062 2.1e-107 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1062 2.1e-107 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1025 2.4e-106 2
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 1052 2.5e-106 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 1052 2.5e-106 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1045 1.4e-105 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1043 2.2e-105 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1042 2.8e-105 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1042 2.8e-105 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1041 3.6e-105 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1035 1.6e-104 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1033 2.5e-104 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1026 1.4e-103 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1024 2.3e-103 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1010 6.9e-102 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1010 6.9e-102 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1004 3.0e-101 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1004 3.0e-101 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 987 1.9e-99 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 966 4.7e-99 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 979 1.3e-98 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 908 1.8e-93 2
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 928 3.4e-93 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 928 3.4e-93 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 905 9.3e-91 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 902 1.9e-90 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 900 3.1e-90 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 898 5.1e-90 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 896 8.3e-90 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 896 8.3e-90 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 896 8.3e-90 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 895 1.1e-89 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 895 1.1e-89 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 895 1.1e-89 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 894 1.4e-89 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 894 1.4e-89 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 887 7.5e-89 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 885 1.2e-88 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 885 1.2e-88 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 880 4.1e-88 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 880 4.1e-88 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 879 5.3e-88 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 877 8.6e-88 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 854 2.4e-85 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 832 5.0e-83 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 828 1.3e-82 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 826 2.2e-82 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 788 2.3e-78 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 788 2.3e-78 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 632 3.7e-66 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 632 1.0e-63 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 648 1.6e-63 1
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 637 2.9e-61 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 615 6.3e-60 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 607 5.0e-58 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 579 6.8e-56 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 531 4.0e-51 1
WB|WBGene00021615 - symbol:Y47C4A.1 species:6239 "Caenorh... 511 5.2e-49 1
WB|WBGene00022429 - symbol:Y108F1.1 species:6239 "Caenorh... 511 5.2e-49 1
WARNING: Descriptions of 608 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 2800 (990.7 bits), Expect = 1.4e-291, P = 1.4e-291
Identities = 555/757 (73%), Positives = 605/757 (79%)
Query: 58 AAIGAKNESNLWDLNHVLANPGIYRFFSSESPKNKKNFENFYPXXXXXXXXXXXXXXXXX 117
A+ A+ DL+ ANP + RFFSS++PK KKN+EN+YP
Sbjct: 60 ASFAARKGLEAGDLSRAFANPRLRRFFSSQTPK-KKNYENYYPKDSKKAPKNEQKSESRD 118
Query: 118 XXXNTDDHGNFQDTFMKQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGL 177
++ N D F ++QN++ PL+ IAL LS+FSL REQQQISFQEFKNKLLE GL
Sbjct: 119 GSKKNENE-NAGDAFSNEYQNMLIPLMAIALILSTFSLGSREQQQISFQEFKNKLLEAGL 177
Query: 178 VDHIVVSNKSVAKVFVRSSPHNQTIEDDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXX 237
VDHI VSNK VAKV+VRSSP +QT E+ GP +G P+KG GGQYKYYFNIGSV
Sbjct: 178 VDHIDVSNKEVAKVYVRSSPKSQTTEEVVQGPGNGVPAKGRGGQYKYYFNIGSVESFEEK 237
Query: 238 XXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXXXXXXXXXXXXXXXXXX- 296
+G++ HDFVPVTYVSE +WY EL+RFAP
Sbjct: 238 LEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAPTLLLVATLIFGARRMQGGLGGLGGP 297
Query: 297 XXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGA 356
IFNIGKA +T+ DKN+KNK+YF+DVAGC+EAKQEIMEFVHFL+NP+KYEDLGA
Sbjct: 298 GGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGA 357
Query: 357 KIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQ 416
KIPKGALLVGPPGTGKTLLAKATAGES VPFLSISGSDFMEMFVGVGPSRVRNLFQEARQ
Sbjct: 358 KIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQ 417
Query: 417 CAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPD 476
CAPSIIFIDEID NDERESTLNQLLVEMDGFGTTAGVVV+AGTNRPD
Sbjct: 418 CAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPD 477
Query: 477 ILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGA 536
ILDKALLRPGRFDRQITIDKPDIKGRDQIFQ+YLKKIKLDHEPSYYSQRLAALTPGFAGA
Sbjct: 478 ILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGA 537
Query: 537 DIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHA 596
DIANVCNEAALIAAR E + VTM HF++AIDRVIGGLEKKN+VISKLERRTVAYHESGHA
Sbjct: 538 DIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHA 597
Query: 597 VAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVL 656
VAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL
Sbjct: 598 VAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 657
Query: 657 LGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDA 716
+G+ISTGAQNDLEKVTKMTYAQVAVYGFSDK+GLLSFPQRED F SKPYS++TGA+ID
Sbjct: 658 IGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDEF--SKPYSNRTGAMIDE 715
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYD 776
EVREWVGKAY RTV+LIEEHKE VAQIAELLLEKEVLHQDDL +VLGERPFKS E TNYD
Sbjct: 716 EVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERPFKSGETTNYD 775
Query: 777 RFKQGFEEEEKSS---APPETGTVDDGSSPLEPQVAP 810
RFK GFEE EK S + P DDG PLEPQV P
Sbjct: 776 RFKSGFEESEKESQKESVPVKPVEDDGIPPLEPQVVP 812
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 2766 (978.7 bits), Expect = 5.8e-288, P = 5.8e-288
Identities = 551/744 (74%), Positives = 600/744 (80%)
Query: 70 DLNHVLANPGIYRFFSSESPKNKKNFENFYPXXXXXXXXXXXXXXXXXXXXNTDDHGNFQ 129
DL V ANP + RFFS E+PK KKN+EN++P N ++ N
Sbjct: 69 DLIGVFANPRLRRFFSDEAPK-KKNYENYFPKDKQEPKSDQKSEHKEGSEKNENE--NVG 125
Query: 130 DTFMKQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVA 189
D FM +FQNL+ PLL +A+F S+FS EQQQISFQEFKNKLLEPGLVDHI VSNKSVA
Sbjct: 126 DMFMNRFQNLLIPLLALAVFFSTFSFGSGEQQQISFQEFKNKLLEPGLVDHIDVSNKSVA 185
Query: 190 KVFVRSSPHNQTIEDDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDP 249
KV+VRS+P +Q D HG +G P+K GGQYKYYFNIGSV LG+D
Sbjct: 186 KVYVRSTPKDQQTTDVVHGNGNGIPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDR 245
Query: 250 HDFVPVTYVSEMVWYNELMRFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGK 309
H++VPVTYVSEMVWY E MRFAP IFNIGK
Sbjct: 246 HEYVPVTYVSEMVWYQEFMRFAPTLLLLGTLIYGARRMQGGLGVGGTGGKNGRGIFNIGK 305
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPG 369
A +T+ DK++KNK+YF+DVAGCDEAKQEIMEFVHFLKNP+KYEDLGAKIPKGALLVGPPG
Sbjct: 306 ATITRADKHSKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPG 365
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVR+LFQEARQ APSIIFIDEID
Sbjct: 366 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDA 425
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFD 489
NDERESTLNQLLVEMDGFGTTAGVVV+AGTNRPDILDKALLRPGRFD
Sbjct: 426 IGRARGRGGLGG-NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 484
Query: 490 RQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 549
RQITIDKPDIKGRDQIF++YLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA
Sbjct: 485 RQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 544
Query: 550 ARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLL 609
AR E + VTM HFE+AIDRVIGGLEKKN+VISKLERRTVAYHESGHAV GWFLEHAEPLL
Sbjct: 545 ARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLL 604
Query: 610 KVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLE 669
KVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+GKISTGAQNDLE
Sbjct: 605 KVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLE 664
Query: 670 KVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRT 729
KVTKMTYAQVAVYGFSDKVGLLSFP R+D ++ SKPYS+KTGAIID EVR+WV KAY RT
Sbjct: 665 KVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERT 724
Query: 730 VQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSS 789
V+L+EEHK VA+IAELLLEKEVLHQDDLL++LGERPFKS+E+TNYDRFK GFEE EK S
Sbjct: 725 VELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDS 784
Query: 790 A--PPETGTVDDGSSP-LEPQVAP 810
A P VDDG+ P EPQV P
Sbjct: 785 AATPTVEPVVDDGAPPPFEPQVVP 808
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 1520 (540.1 bits), Expect = 1.6e-163, Sum P(3) = 1.6e-163
Identities = 293/473 (61%), Positives = 370/473 (78%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+F+ GK+ K +K+ V F DVAG EAK EI EFV+FLKNP+K+ D+GAKIP+GA+
Sbjct: 281 MFSQGKSTANKFEKSTST-VKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAI 339
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
LVGPPGTGKTL+AKATAGE+ VPF S SGSDF+EMFVGVGPSRVR+LF++AR+ AP I+F
Sbjct: 340 LVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVF 399
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID NDERE+TLNQLLVEMDGF VVV+A TNRPDILDKALL
Sbjct: 400 IDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALL 459
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFDRQITID PD+K R++IF+V+L + LD +Y ++RL+ LTPGF+GADIANVCN
Sbjct: 460 RPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSINY-AERLSKLTPGFSGADIANVCN 518
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAALIAAR +T+EHF+AA+DRVIGGLEKKNKV+S E+RTVAYHE+GHAV WFL+
Sbjct: 519 EAALIAARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLK 578
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H PLLKV+IVPRG AALG+AQY+P E L +EQ+FDM CM LGGR AEQ+ G I+TG
Sbjct: 579 HCHPLLKVSIVPRGVAALGYAQYLPKEQFLQNQEQIFDMMCMALGGRVAEQLTFGTITTG 638
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVG 723
AQ+DLEK+TKM Y+QV++YG ++K+G LS+ + +D +++KPYS +T ++D EVR+ +
Sbjct: 639 AQDDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQDGSDLTKPYSEETAEVMDEEVRKLLK 698
Query: 724 KAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF--KSSELTN 774
AY RT Q+++EH+E + +A LLLEKEV+H +++ VLG RPF K+ E N
Sbjct: 699 SAYDRTTQVLQEHREGLISVANLLLEKEVIHFEEVEAVLGPRPFNNKTEEPKN 751
Score = 69 (29.3 bits), Expect = 1.6e-163, Sum P(3) = 1.6e-163
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 121 NTDDHGNFQDTFMKQ-----FQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLE 174
N D+ N ++FM+Q F+ + ++ I + LS F + E +I F EF ++L E
Sbjct: 126 NKDNKDNKDESFMQQMNSPEFKKYLITVISIGVILSLFRPNTEEGNEIKFSEFLDELSE 184
Score = 40 (19.1 bits), Expect = 1.6e-163, Sum P(3) = 1.6e-163
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 226 FNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTY 257
F IG LGI F+P++Y
Sbjct: 215 FKIGDKKVFEEQVEKVQSDLGIPKSQFIPISY 246
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 1435 (510.2 bits), Expect = 5.4e-160, Sum P(4) = 5.4e-160
Identities = 281/474 (59%), Positives = 363/474 (76%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
V F+DVAGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE
Sbjct: 300 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 359
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
+ VPF++++GS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID
Sbjct: 360 ANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGGQ 419
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
+ E+E+TLNQLLVEMDGF T VVV+AGTNRPDILD AL+RPGRFDRQI I PDIKGR
Sbjct: 420 S-EQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGR 478
Query: 503 DQIFQVYLKKIKLDHE--PSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTME 560
IF+V+L+ +KL+ E ++++AALTPGF+GADIANVCNEAALIAAR + + +
Sbjct: 479 ASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQK 538
Query: 561 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 620
HFE AI+RVIGGLEKK +V+ E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG
Sbjct: 539 HFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG- 597
Query: 621 LGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVA 680
LG+AQY+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL+KVT+ YAQ+
Sbjct: 598 LGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLKKVTQSAYAQIV 657
Query: 681 VYGFSDKVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEH 739
+G ++KVG +SF R+ + KPYS T +ID EVR + AY RT QL+ + K
Sbjct: 658 QFGMNEKVGQVSFDLPRQGELVLEKPYSEATARLIDTEVRNLISTAYERTQQLLSDKKPE 717
Query: 740 VAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
V ++A LLEKEVL ++D++ +LG+RPF +E + Y+ F +G ++ ++ PE
Sbjct: 718 VEKVALRLLEKEVLDKNDMVELLGKRPF--AEKSTYEEFVEGTGSVDEDTSLPE 769
Score = 68 (29.0 bits), Expect = 5.4e-160, Sum P(4) = 5.4e-160
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 213 TPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSE 260
TP K GQY +FNIGSV LGI+ + +PV Y +E
Sbjct: 196 TPGKTPVDGQY-VWFNIGSVDTFERNLETAQLELGIEGENRLPVVYSAE 243
Score = 59 (25.8 bits), Expect = 5.4e-160, Sum P(4) = 5.4e-160
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 161 QQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
+++++++F N L G+VD + V NK KV
Sbjct: 163 REVTWKDFVNSYLAKGVVDRLEVVNKRYVKV 193
Score = 45 (20.9 bits), Expect = 5.4e-160, Sum P(4) = 5.4e-160
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 79 GIYRFFSSESPKNKKNFENFYP 100
G YR SS+ PK FE ++P
Sbjct: 51 GTYRRLSSKPPKG---FEKYFP 69
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 1427 (507.4 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 288/568 (50%), Positives = 386/568 (67%)
Query: 220 GQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDF-VPVTYVSEMVWYNELMRFAPXXXXXX 278
G+ YYF IGS+ L ID DF +PV YV E W + + P
Sbjct: 248 GRNFYYFTIGSIDSFEHKLQKAQDELDIDK-DFRIPVLYVQEGNWAKAMFQILPTVLMIA 306
Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEI 338
IF + ++ K + K+ F+DVAGCDEAK+EI
Sbjct: 307 GIIWLTRRSAQAAGGSRGG------IFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEI 360
Query: 339 MEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM 398
MEFV FLK P +YE +GAKIP+GA+L GPPGTGKTLLAKATAGE+GVPF +SGS+F+EM
Sbjct: 361 MEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEM 420
Query: 399 FVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMD 458
FVGVG +RVR+LF+ AR+ APSI+FIDEID NDERE+TLNQ+LVEMD
Sbjct: 421 FVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMD 480
Query: 459 GFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHE 518
GF VVV+AGTNRPDILDKALLRPGRFDR I IDKP+++GR IF V+L +KL E
Sbjct: 481 GFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGE 540
Query: 519 PSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNK 578
RLAALTPGF+GADIANVCNEAALIAAR + V + HFE AI+RVIGG+E+K+K
Sbjct: 541 IFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSK 600
Query: 579 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQ 638
++S E++ VAYHE+GHAV GW+L++A+PLLKV+I+PRG ALG+AQY+P + LLT++Q
Sbjct: 601 LLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQ 660
Query: 639 LFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED 698
L D M+LGGR +E++ +++GA +D +KVT M A V G SDK+G +++ +R+D
Sbjct: 661 LKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDD 720
Query: 699 TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDL 758
+ +++KP+S +TG IID+EV V + + R +L++E E V +IA++LL+KEVL ++D+
Sbjct: 721 S-DLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDM 779
Query: 759 LRVLGERPFKSSELTNYDRFKQGFEEEE 786
+ +LG+RPF +D++ +E E+
Sbjct: 780 IDLLGKRPFPERN-DAFDKYLNDYETEK 806
Score = 140 (54.3 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 44/132 (33%), Positives = 62/132 (46%)
Query: 146 IALFLSSFSL----SPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSPHNQT 201
+ FL SF L S EQ +I++Q+F+ KLL G V ++V NKS+ KV + + NQ
Sbjct: 185 LTFFLLSFLLDLLNSLEEQSEITWQDFREKLLAKGYVAKLIVVNKSMVKVMLNDNGKNQA 244
Query: 202 IEDDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDF-VPVTYVSE 260
D++ G+ YYF IGS+ L ID DF +PV YV E
Sbjct: 245 --DNY-------------GRNFYYFTIGSIDSFEHKLQKAQDELDIDK-DFRIPVLYVQE 288
Query: 261 MVWYNELMRFAP 272
W + + P
Sbjct: 289 GNWAKAMFQILP 300
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 1488 (528.9 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 312/588 (53%), Positives = 405/588 (68%)
Query: 210 VSGTPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
V+ TP K GQY +FNIGSV LGI+ + VPV Y++E + L+
Sbjct: 198 VTFTPGKTPVDGQY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLL 255
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ KV K+ + V F+DV
Sbjct: 256 SMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGET-TAKVLKDEID-VKFKDV 310
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 311 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFI 370
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID + E+E+
Sbjct: 371 TVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQEN 429
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQLLVEMDGF TT VV++AGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+V
Sbjct: 430 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKV 489
Query: 509 YLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI
Sbjct: 490 HLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAI 549
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY
Sbjct: 550 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQY 608
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++
Sbjct: 609 LPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNE 668
Query: 687 KVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAE 745
KVG +SF R+ + KPYS T +ID EVR + AY RTV L+ E K V ++A
Sbjct: 669 KVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 728
Query: 746 LLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLLEKEVL ++D++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 729 LLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 774
Score = 63 (27.2 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 153 FSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
+ L R ++I++++F N L G+VD + V NK +V
Sbjct: 160 YLLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRV 198
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 1483 (527.1 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 310/588 (52%), Positives = 405/588 (68%)
Query: 210 VSGTPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
V+ TP K GQY +FNIGSV LGI+ + VPV Y++E + L+
Sbjct: 199 VTFTPGKTPVDGQY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLL 256
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ KV K+ + V F+DV
Sbjct: 257 SMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGET-TAKVLKDEID-VKFKDV 311
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 312 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFI 371
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID + E+E+
Sbjct: 372 TVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQEN 430
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQLLVEMDGF TT VV++AGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+V
Sbjct: 431 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKV 490
Query: 509 YLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI
Sbjct: 491 HLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAI 550
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY
Sbjct: 551 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQY 609
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L T+EQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++
Sbjct: 610 LPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNE 669
Query: 687 KVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAE 745
KVG +SF R+ + KPYS T +ID EVR + AY RTV L+ E K V ++A
Sbjct: 670 KVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 729
Query: 746 LLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLLEKEVL ++D++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 730 LLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 775
Score = 64 (27.6 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 148 LFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
LF F S RE I++++F N L G+VD + V NK +V
Sbjct: 159 LFYFLFKSSGRE---ITWKDFANNYLSKGVVDRLEVVNKRFVRV 199
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 1486 (528.2 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 312/588 (53%), Positives = 406/588 (69%)
Query: 210 VSGTPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
V+ TP K GQY +FNIGSV LGI+ + VPV Y++E + L+
Sbjct: 197 VTFTPGKTPVDGQY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLL 254
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ KV K+ + V F+DV
Sbjct: 255 SMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGET-TAKVLKDEID-VKFKDV 309
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 310 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFI 369
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID + E+E+
Sbjct: 370 TVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQEN 428
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQLLVEMDGF TT VV++AGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+V
Sbjct: 429 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKV 488
Query: 509 YLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI
Sbjct: 489 HLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAI 548
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY
Sbjct: 549 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQY 607
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++
Sbjct: 608 LPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNE 667
Query: 687 KVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAE 745
KVG +SF R+ + KPYS T +ID EVR + +AY RTV L+ E K V ++A
Sbjct: 668 KVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISEAYKRTVALLTEKKADVEKVAL 727
Query: 746 LLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLLEKEVL ++D++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 728 LLLEKEVLDKNDMVELLGPRPF--TEKSTYEEFVEGTGSLDEDTSLPE 773
Score = 60 (26.2 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 147 ALFLSS---FSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
ALF S + L ++I++++F N L G+VD + V NK +V
Sbjct: 150 ALFWSGVMIYFLFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRV 197
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 1483 (527.1 bits), Expect = 3.4e-156, Sum P(2) = 3.4e-156
Identities = 311/588 (52%), Positives = 404/588 (68%)
Query: 210 VSGTPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
V+ TP K GQY +FNIGSV LGI+ + VPV Y++E + L+
Sbjct: 199 VTFTPGKTPVDGQY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLL 256
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ KV K+ + V F+DV
Sbjct: 257 SMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGET-TAKVLKDEID-VKFKDV 311
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 312 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFI 371
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID + E+E+
Sbjct: 372 TVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQEN 430
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQLLVEMDGF TT VV++AGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+V
Sbjct: 431 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKV 490
Query: 509 YLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI
Sbjct: 491 HLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAI 550
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY
Sbjct: 551 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQY 609
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++
Sbjct: 610 LPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNE 669
Query: 687 KVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAE 745
KVG +SF R+ + KPYS T +ID EVR + AY RTV L+ E K V ++A
Sbjct: 670 KVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 729
Query: 746 LLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLLEKEVL ++D++ +LG RPF E + Y+ F +G ++ ++ PE
Sbjct: 730 LLLEKEVLDKNDMVELLGPRPFV--EKSTYEEFVEGTGSLDEDTSLPE 775
Score = 61 (26.5 bits), Expect = 3.4e-156, Sum P(2) = 3.4e-156
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 148 LFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
+F F S RE I++++F N L G+VD + V NK +V
Sbjct: 159 MFYFLFKSSGRE---ITWKDFVNNYLSKGVVDRLEVVNKRFVRV 199
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 1484 (527.5 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 312/588 (53%), Positives = 406/588 (69%)
Query: 210 VSGTPSKGH-GGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
V+ TP K GQY +FNIGSV LGI+ + VPV Y++E + L+
Sbjct: 197 VTFTPGKTPVDGQY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLL 254
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ KV K+ + V F+DV
Sbjct: 255 SMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGET-TAKVLKDEID-VKFKDV 309
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 310 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFI 369
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
++SGS+F+EMFVGVGP+RVR+LF AR+ AP I+FIDEID + E+E+
Sbjct: 370 TVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQEN 428
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQLLVEMDGF TT VV++AGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+V
Sbjct: 429 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKV 488
Query: 509 YLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI
Sbjct: 489 HLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAI 548
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY
Sbjct: 549 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQY 607
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++
Sbjct: 608 LPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNE 667
Query: 687 KVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAE 745
KVG +SF R+ + KPYS T +ID EVR + AY RTV L+ E K V ++A
Sbjct: 668 KVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVAL 727
Query: 746 LLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLLEKEVL ++D++++LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 728 LLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEGTGSLDEDTSLPE 773
Score = 58 (25.5 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 161 QQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
++I++++F N L G+VD + V NK +V
Sbjct: 167 REITWKDFVNNYLSKGVVDRLEVVNKRFVRV 197
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 1399 (497.5 bits), Expect = 1.1e-155, Sum P(2) = 1.1e-155
Identities = 288/575 (50%), Positives = 375/575 (65%)
Query: 222 YKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXXX 281
+ YYF +GSV LGI + +PV+YV E+ W ++ F P
Sbjct: 305 FYYYFTVGSVESFERKLDQAQFELGIPTSERIPVSYVDEVPWMATVLSFGPTLLFMGGLF 364
Query: 282 XXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEF 341
IF IGK+ + + K+ F DVAG DEAK EIMEF
Sbjct: 365 YLSRRAGSASAGRNG-------IFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEF 417
Query: 342 VHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVG 401
V FLK+P +++ LGAKIP+GA+L GPPGTGKTLLAKATAGESGVPF S+SGS+F+EMFVG
Sbjct: 418 VSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVG 477
Query: 402 VGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFG 461
VGPSRVR+LF AR+ P IIFIDEID NDERESTLNQ+L EMDGF
Sbjct: 478 VGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFN 537
Query: 462 TTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSY 521
T+ VVV+AGTNRPD+LDKAL+RPGRFDR I+ID+P + GR QIF+V+LKKI + Y
Sbjct: 538 TSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDY 597
Query: 522 YSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVIS 581
+ RL+ALTPGFAGADIAN NEAAL+AAR VTM+HFE AI+RV+GGLEKK+ V+S
Sbjct: 598 LTGRLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFERAIERVVGGLEKKSLVLS 657
Query: 582 KLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP--NENLLLTKEQL 639
E+RTVAYHE+GHA+ GW+ A+PLLKV+I+PRG ALG+AQY+P + L+T Q+
Sbjct: 658 PEEKRTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTYLMTANQM 717
Query: 640 FDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDT 699
D MTLGGR +E++ +++GA +D KVT++ A V +G S K+ + + + + +
Sbjct: 718 MDRMAMTLGGRVSEELHFDTVTSGASDDFNKVTRLATAMVTKFGMSPKLKYIYY-EEDPS 776
Query: 700 FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 759
++ KP+S +T ID EVR V +AY + L+ K+ V +AE LL KEVL +DD++
Sbjct: 777 SQLHKPFSEETAKDIDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDMV 836
Query: 760 RVLGERPF-KSSELTNYDRFKQGFEEEEKSSAPPE 793
R+LG R + +S E Y K G ++ APPE
Sbjct: 837 RLLGPREWPESGEFAKYFDGKHG-----QTIAPPE 866
Score = 140 (54.3 bits), Expect = 1.1e-155, Sum P(2) = 1.1e-155
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 145 VIALFLSSFSLSPREQQQ-ISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSPHNQTIE 203
VIA ++ S+ P + + I+++EF++K L+ GLV+ + V+N++ +V + +T
Sbjct: 238 VIAYYIYR-SIFPGDNSKDITWEEFRSKFLDKGLVERLTVTNRTRVRVELNRDAVARTYP 296
Query: 204 DDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVW 263
D P + +P+ + YYF +GSV LGI + +PV+YV E+ W
Sbjct: 297 DS---PAA-SPN------FYYYFTVGSVESFERKLDQAQFELGIPTSERIPVSYVDEVPW 346
Query: 264 YNELMRFAP 272
++ F P
Sbjct: 347 MATVLSFGP 355
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 1425 (506.7 bits), Expect = 6.9e-155, Sum P(3) = 6.9e-155
Identities = 287/501 (57%), Positives = 368/501 (73%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
V F+DVAGC+EAK EIMEFV+FLKNP++Y DLGAKIPKGA+L GPPGTGKTLLAKATAGE
Sbjct: 325 VGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 384
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
+ VPF+++SGS+F+EMFVGVGPSRVR++F AR+ AP I+FIDEID
Sbjct: 385 ANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGG- 443
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
+ E+E+TLNQLLVEMDGF TT VVV+A TNR DILDKAL+RPGRFDRQI + PDIKGR
Sbjct: 444 HSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGR 503
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
IF+V+L +K + + S+++AALTPGF GADIANVCNEAALIAAR + ++HF
Sbjct: 504 ASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHF 563
Query: 563 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 622
E AI+RVI G+EKK V++ E+RTVA+HE+GHAVAGWFLEHA+PLLKV+I+PRG LG
Sbjct: 564 EQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LG 622
Query: 623 FAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVY 682
+AQY+P ++ LL+KEQLFD CMTLGGR AE++ +I+TGAQ+DL+K+T + Y+QV +
Sbjct: 623 YAQYLPKDHYLLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQDDLKKITDIAYSQVVRF 682
Query: 683 GFSDKVGLLSFP--QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHV 740
G ++KVG +SF Q D SKPYS T +ID EVR + A+ T L+ +HKE+V
Sbjct: 683 GMNEKVGQVSFDVGQAGDPV-FSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENV 741
Query: 741 AQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE------- 793
++AE LL+ EVL +DD++ +LG RPFK E + Y+ F +G E+ + PE
Sbjct: 742 QKVAERLLQNEVLSRDDMIELLGPRPFK--EKSTYEEFVEGTGSFEEDTTLPEGLKSWNK 799
Query: 794 ----TGTVDDGSSPLEPQVAP 810
T +D GS+P P P
Sbjct: 800 EKERTEPLDAGSTPSSPPTKP 820
Score = 65 (27.9 bits), Expect = 6.9e-155, Sum P(3) = 6.9e-155
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 148 LFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSPHN 199
+ + SF+ ++IS++EF N L G+V+ + V NK +V ++ + ++
Sbjct: 173 VLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNS 224
Score = 57 (25.1 bits), Expect = 6.9e-155, Sum P(3) = 6.9e-155
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 218 HGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEM 261
+ G +FNIGSV G + +FVPV Y +E+
Sbjct: 223 NSGSGVLWFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEV 266
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 1459 (518.7 bits), Expect = 2.1e-154, Sum P(2) = 2.1e-154
Identities = 305/576 (52%), Positives = 397/576 (68%)
Query: 221 QYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXX 280
QY +FNIGSV LGI+ + +PV Y +E + L+ P
Sbjct: 54 QY-VWFNIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDG-SFLLSLLPTILIIGSL 111
Query: 281 XXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIME 340
+F++G+ KV K+ + V F+DVAGC+EAK EIME
Sbjct: 112 LYTLRRGPAGLGRGGRGMGG---LFSVGET-TAKVLKDEID-VKFKDVAGCEEAKLEIME 166
Query: 341 FVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFV 400
FV+FLKNP++YEDLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFV
Sbjct: 167 FVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFV 226
Query: 401 GVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGF 460
GVGP+RVR+LF AR+ AP I+FIDEID + E+E+TLNQLLVEMDGF
Sbjct: 227 GVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGF 285
Query: 461 GTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDH--E 518
TT VV++AGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+V+L+ +KLD +
Sbjct: 286 NTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLD 345
Query: 519 PSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNK 578
+++LA+LTPGF+GADIANVCNEAALIAAR + + +HFE AI+RVIGGLEKK +
Sbjct: 346 KDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQ 405
Query: 579 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQ 638
V+ E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P E L TKEQ
Sbjct: 406 VLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQ 464
Query: 639 LFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QRE 697
L D CMTLGGR +EQ+ G+I+TGAQ+DL+KVT+ YAQ+ +G ++KVG +SF R+
Sbjct: 465 LLDRMCMTLGGRVSEQIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQ 524
Query: 698 DTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDD 757
+ KPYS T +ID EVR + AY RT+ L+ E K V ++A LLEKEVL + D
Sbjct: 525 GDMVLEKPYSEATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSD 584
Query: 758 LLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 585 MVDLLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 618
Score = 68 (29.0 bits), Expect = 2.1e-154, Sum P(2) = 2.1e-154
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 161 QQISFQEFKNKLLEPGLVDHIVVSNKSVAKV-FVRS-SPH 198
++I++++F N L G+VD + V NK +V FV SPH
Sbjct: 14 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFVSGKSPH 53
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 1458 (518.3 bits), Expect = 2.7e-154, Sum P(2) = 2.7e-154
Identities = 303/576 (52%), Positives = 397/576 (68%)
Query: 221 QYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXX 280
++ +FNIGSV LGI+ + +PV Y +E + L+ P
Sbjct: 209 EWYVWFNIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDG-SFLLSLLPTILIIGSL 267
Query: 281 XXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIME 340
+F++G+ KV K+ + V F+DVAGC+EAK EIME
Sbjct: 268 LYTLRRGPAGLGRGGRGMGG---LFSVGET-TAKVLKDEID-VKFKDVAGCEEAKLEIME 322
Query: 341 FVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFV 400
FV+FLKNP++YEDLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFV
Sbjct: 323 FVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFV 382
Query: 401 GVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGF 460
GVGP+RVR+LF AR+ AP I+FIDEID + E+E+TLNQLLVEMDGF
Sbjct: 383 GVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGF 441
Query: 461 GTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDH--E 518
TT VV++AGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+V+L+ +KLD +
Sbjct: 442 NTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLD 501
Query: 519 PSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNK 578
+++LA+LTPGF+GADIANVCNEAALIAAR + + +HFE AI+RVIGGLEKK +
Sbjct: 502 KDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQ 561
Query: 579 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQ 638
V+ E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P E L TKEQ
Sbjct: 562 VLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQ 620
Query: 639 LFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QRE 697
L D CMTLGGR +EQ+ G+I+TGAQ+DL+KVT+ YAQ+ +G ++KVG +SF R+
Sbjct: 621 LLDRMCMTLGGRVSEQIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQ 680
Query: 698 DTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDD 757
+ KPYS T +ID EVR + AY RT+ L+ E K V ++A LLEKEVL + D
Sbjct: 681 GDMVLEKPYSEATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSD 740
Query: 758 LLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 741 MVDLLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 774
Score = 68 (29.0 bits), Expect = 2.7e-154, Sum P(2) = 2.7e-154
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 161 QQISFQEFKNKLLEPGLVDHIVVSNKSVAKV-FVRS-SPH 198
++I++++F N L G+VD + V NK +V FV SPH
Sbjct: 169 REITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFVSGKSPH 208
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 1415 (503.2 bits), Expect = 4.5e-152, Sum P(2) = 4.5e-152
Identities = 295/577 (51%), Positives = 379/577 (65%)
Query: 220 GQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXX 279
G +YYF+IGS+ LGI P +FVPV Y E+ L+ FAP
Sbjct: 196 GSGQYYFSIGSIDSFDRKLEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGS 255
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIM 339
IF IGK+ + K+ F DVAG DEAK+EIM
Sbjct: 256 VIYLSRRASGAAGGGQGG------IFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIM 309
Query: 340 EFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMF 399
EFV FLKNP+ YE LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMF
Sbjct: 310 EFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMF 369
Query: 400 VGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDG 459
VGVGPSRVR+LF AR+ AP IIFIDEID NDERESTLNQLLVEMDG
Sbjct: 370 VGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDG 429
Query: 460 FGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEP 519
F ++ +VV AGTNRPD+LD ALLRPGRFDRQITID+PDI GR+QIF+V+LK IK
Sbjct: 430 FTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNI 489
Query: 520 SYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
++RLA LT GF GADI NVCNE ALIAAR +++V M HFE AI+RV GLEKK++V
Sbjct: 490 DLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRV 549
Query: 580 ISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQL 639
+S E+ TVA+HE+GHAVAGWF+E+ +PLLKV+I+PR A LG+A Y+P + L+++ Q+
Sbjct: 550 LSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQA-LGYASYLPKDQYLMSRGQI 608
Query: 640 FDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE 697
D M L GR +E++ G KI++GA +D +KVT+M A V YG S VG +++P
Sbjct: 609 LDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPI-- 666
Query: 698 DTFE-MSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQD 756
DT E + KP+S T +ID E+R+ V AY RT +L+ EHK+ + IA+ LL+KEV+ +
Sbjct: 667 DTRETVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYN 726
Query: 757 DLLRVLGERPFKSSELTNYDRFKQG-FEEEEKSSAPP 792
++ +LG RP+ L + +Q ++ + PP
Sbjct: 727 EVETILGPRPYAYKHLNISELMRQSEYKNDHDPRNPP 763
Score = 90 (36.7 bits), Expect = 4.5e-152, Sum P(2) = 4.5e-152
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 138 NLITPLLVIALFLSSFSLSPR-EQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVR 194
N I +++A L + LSP Q+I++Q+F+ + L+ GLV+ +VV N+++ +V +R
Sbjct: 134 NTILGGILVAYILYNV-LSPNANMQEITWQDFRQQFLDKGLVERLVVVNRNMVRVILR 190
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 1404 (499.3 bits), Expect = 2.1e-151, Sum P(3) = 2.1e-151
Identities = 290/514 (56%), Positives = 371/514 (72%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+F IG+ + K+ K+ V F DVAGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGAL
Sbjct: 283 LFGIGET-IAKIIKDDIG-VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAL 340
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L GPPGTGKTLLAKATAGE+GVPF++++GS+F+EMFVGVGP+RVR++F AR+ AP I+F
Sbjct: 341 LTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILF 400
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
+DEID + E+E+TLNQLLVEMDGF +T VVV+AGTNRPD+LD AL+
Sbjct: 401 VDEIDAIGRKRGRGHFGGQS-EQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALM 459
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSY--YSQRLAALTPGF--AGADIA 539
RPGRFDRQI I PDIKGR IF+V+L+ +KLD S +++LAALTPGF +GADI+
Sbjct: 460 RPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADIS 519
Query: 540 NVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAG 599
NVCNEAALIAAR N V +HFE AI+RVIGGLEKK +V+ E+ TVAYHE+GHAV G
Sbjct: 520 NVCNEAALIAARHLNPSVGEKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVG 579
Query: 600 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGK 659
WFLEHA+PLLKV+IVPRG LG+AQ +P E L T+EQLFD C LGGR AEQ+ G+
Sbjct: 580 WFLEHADPLLKVSIVPRGKG-LGYAQCLPREQYLYTREQLFDRMCAMLGGRVAEQLFFGR 638
Query: 660 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEV 718
++TGAQ+DL KVT+ YAQ+ +G S+K+G +SF R + KP+S T +ID EV
Sbjct: 639 VTTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLIDEEV 698
Query: 719 REWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRF 778
R +G A+ RT+ L+ +E V ++ LLEKEVL + D++ +LG RPF +E Y+
Sbjct: 699 RRLIGSAHARTLDLLTRCREQVDKVGRRLLEKEVLERADMVELLGPRPF--AEKVTYEEL 756
Query: 779 KQGFEEEEKSSAPPETGTVDDGSSPL--EPQVAP 810
+G E+ +A PE G P EP +AP
Sbjct: 757 VEGTGGLEEDTALPE-GLQGWRGGPTAGEPSLAP 789
Score = 56 (24.8 bits), Expect = 2.1e-151, Sum P(3) = 2.1e-151
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 145 VIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
V+A FL + P ++ I+++ F L GLVD + V NK +V
Sbjct: 152 VVAGFLYFYFRDPGKE--ITWKHFVQYYLARGLVDRLEVVNKQFVRV 196
Score = 54 (24.1 bits), Expect = 2.1e-151, Sum P(3) = 2.1e-151
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 223 KY-YFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSE 260
KY +F+IGSV LGI+P + V Y +E
Sbjct: 206 KYAWFSIGSVDTFERNLETAQWELGIEPPNQTAVVYTTE 244
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 1437 (510.9 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 307/589 (52%), Positives = 396/589 (67%)
Query: 209 PVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELM 268
PV GT S+ +FNIGSV LGI+P + V Y +E + L
Sbjct: 195 PVPGTTSERF-----VWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTTESDG-SFLR 248
Query: 269 RFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDV 328
P +F++G+ K+ KN + V F DV
Sbjct: 249 SLVPTLVLVSILLYAMRRGPMGTGRGGRGGG----LFSVGET-TAKILKNNID-VRFADV 302
Query: 329 AGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFL 388
AGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+
Sbjct: 303 AGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFI 362
Query: 389 SISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERES 448
+++GS+F+EMFVGVGP+RVR++F AR+ AP I+FIDEID + E+E+
Sbjct: 363 TVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS-EQEN 421
Query: 449 TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQV 508
TLNQ+LVEMDGF ++ VVV+AGTNRPDILD AL RPGRFDRQI I PDIKGR IF+V
Sbjct: 422 TLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKV 481
Query: 509 YLKKIKLDHEPSY--YSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+L+ +KLD S S++LAALTPGF GADI+NVCNEAALIAAR + V HFE AI
Sbjct: 482 HLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAI 541
Query: 567 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 626
+RVIGGLEKK +V+ E+ TVAYHE+GHAV GWFLEHA+PLLKV+I+PRG LG+AQY
Sbjct: 542 ERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKG-LGYAQY 600
Query: 627 VPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSD 686
+P E L T+EQLFD CM LGGR AEQ+ G+I+TGAQ+DL KVT+ YAQ+ +G S+
Sbjct: 601 LPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSE 660
Query: 687 KVGLLSF--PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIA 744
K+G +SF P++ +T + KPYS T +ID EVR V AY RT++L+ + +E V ++
Sbjct: 661 KLGQVSFDFPRQGETM-VEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVG 719
Query: 745 ELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
LLEKEVL + D++ +LG RPF +E + Y+ F +G E+ ++ PE
Sbjct: 720 RRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFVEGTGSLEEDTSLPE 766
Score = 56 (24.8 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 134 KQFQNL-ITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVF 192
K F++L + V A FL + P ++ I+++ F L GLVD + V NK F
Sbjct: 137 KDFRSLAVLGAGVAAGFLYFYFRDPGKE--ITWKHFVQYYLARGLVDRLEVVNKQ----F 190
Query: 193 VRSSPHNQTIEDDF 206
VR P T + F
Sbjct: 191 VRVIPVPGTTSERF 204
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 1429 (508.1 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 285/489 (58%), Positives = 354/489 (72%)
Query: 319 AKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKA 378
A + F+DVAG DEAK+EIMEFV FLK+P +Y+ LGA+IPKGA+L GPPGTGKTLLAKA
Sbjct: 347 ATSTTTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKA 406
Query: 379 TAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXX 438
TAGE+GV F +ISGSDF+EMFVGVGPSRVR+LF+EAR P I+FIDEID
Sbjct: 407 TAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSRGG 466
Query: 439 XXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPD 498
NDERE+TLNQLLVEMDGF +T+GVVV AGTNR D+LD ALLRPGRFDRQI + KPD
Sbjct: 467 FH--NDERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPD 524
Query: 499 IKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVT 558
IKGR IF V+LK IKLD E +++LA LTPGF+GADIANVCNE AL+AAR + +
Sbjct: 525 IKGRKDIFMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDATSAN 584
Query: 559 MEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGT 618
+HFE AI+RV+ GL+++N+V+S ER VA+HE+GHAV GWFLEH +PLLKV+IVPRG+
Sbjct: 585 FDHFEEAIERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGS 644
Query: 619 AALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQ 678
LGFAQY P + L T+EQLFD C++LGGR AE ++ +ISTGA +DL+KVTKM A
Sbjct: 645 GTLGFAQYQPKDQYLYTREQLFDRICVSLGGRIAESIIFDRISTGAMDDLDKVTKMASAS 704
Query: 679 VAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKE 738
V YG S+KVG+ SF + D + KPYS T +ID E+R V AY +T QL+ E KE
Sbjct: 705 VVNYGMSEKVGVASFRKEGDDITVVKPYSQATARMIDEEIRRMVNDAYSKTTQLLHEKKE 764
Query: 739 HVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVD 798
+ ++A +LLEKEV+ +DDL +LG RP+ E T + E E+ A T +
Sbjct: 765 LLIKLATILLEKEVIQRDDLRTILGPRPY--GEQTTWAELTGETENEKIKEAELSTESQQ 822
Query: 799 DGSSPLEPQ 807
+EPQ
Sbjct: 823 KEVDSIEPQ 831
Score = 64 (27.6 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 126 GNFQDTFMKQF--QNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVV 183
GN D+ + F L ++A + F+ + +I +Q F+NK+L P H ++
Sbjct: 178 GNQPDSPISSFFTPRAAAILAIVAANILIFTFIKPQNDEIDYQTFRNKIL-PNAEIHSIL 236
Query: 184 SNKSVAKVFVRSSP 197
+ A+V + P
Sbjct: 237 LTNTTAEVVEKVQP 250
Score = 46 (21.3 bits), Expect = 6.6e-149, Sum P(2) = 6.6e-149
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 169 KNKLLEPGLVDHIVVSNKSVAKVFVRSSPHNQTIEDD 205
+N + ++D+ SN+++ K + SS +N IE++
Sbjct: 42 ENNKIPQSIIDNNNNSNRNILKCNIYSSFNNNKIENN 78
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 1424 (506.3 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
Identities = 287/494 (58%), Positives = 370/494 (74%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+F++G+ K+ KN + V F DVAGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+
Sbjct: 252 LFSVGET-TAKILKNNID-VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAM 309
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVGP+RVR++F AR+ AP I+F
Sbjct: 310 LTGPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILF 369
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID + E+E+TLNQ+LVEMDGF +T VVV+AGTNRPDILD AL
Sbjct: 370 IDEIDAIGRKRGRGHLGGQS-EQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALT 428
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSY--YSQRLAALTPGFAGADIANV 541
RPGRFDRQI I PDIKGR IF+V+L+ +KLD + S++LAALTPGF GADI+NV
Sbjct: 429 RPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNV 488
Query: 542 CNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWF 601
CNEAALIAAR + V HFE AI+RVIGGLEKK +V+ E+ TVAYHE+GHAV GWF
Sbjct: 489 CNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWF 548
Query: 602 LEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKIS 661
LEHA+PLLKV+I+PRG LG+AQY+P E L T+EQLFD CM LGGR AEQ+ G+I+
Sbjct: 549 LEHADPLLKVSIIPRGKG-LGYAQYLPREQYLYTREQLFDRMCMMLGGRVAEQLFFGQIT 607
Query: 662 TGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF--PQREDTFEMSKPYSSKTGAIIDAEVR 719
TGAQ+DL KVT+ YAQ+ +G S+K+G +SF P++ +T + KPYS T +ID EVR
Sbjct: 608 TGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETM-VEKPYSEATAQLIDEEVR 666
Query: 720 EWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFK 779
V AY RT++L+ + +E V ++ LLEKEVL + D++ +LG RPF +E + Y+ F
Sbjct: 667 CLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFV 724
Query: 780 QGFEEEEKSSAPPE 793
+G E+ ++ PE
Sbjct: 725 EGTGSLEEDTSLPE 738
Score = 64 (27.6 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 209 PVSGTPSKGHGGQYKY-YFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSE 260
PV GT S+ K+ +FNIGSV LG++P + V V Y +E
Sbjct: 167 PVPGTTSE------KFVWFNIGSVDTFERNLESAQWELGVEPTNQVSVVYTTE 213
Score = 54 (24.1 bits), Expect = 3.2e-149, Sum P(2) = 3.2e-149
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 134 KQFQNL-ITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVF 192
K F++L + V + FL + P ++ I+++ F L GLVD + V NK F
Sbjct: 109 KDFRSLAVLGAGVASGFLYFYFRDPGKE--ITWKHFVQYYLARGLVDRLEVVNKQ----F 162
Query: 193 VRSSPHNQTIEDDF 206
VR P T + F
Sbjct: 163 VRVIPVPGTTSEKF 176
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 1370 (487.3 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 269/463 (58%), Positives = 353/463 (76%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
KV F DVAGC+EAK EIMEFV+FLKNP++Y+DLGAKIPKGA+L GPPGTGKTLLAKATAG
Sbjct: 289 KVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAG 348
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ VPF+++SGS+F+EMFVGVGP+RVR++F AR+ +P I+FIDEID
Sbjct: 349 EANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMG 408
Query: 442 XNDERESTLNQLLVEMDGFGTT-AGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ E+E+TLNQLLVEMDGF T + V+VIA TNR DILD ALLRPGRFDRQI + PDIK
Sbjct: 409 GHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIK 468
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTME 560
GR IF+V+L ++ + + S++LAA TPGF+GADI+NVCNEAALIAAR N +++ +
Sbjct: 469 GRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNK 528
Query: 561 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 620
HFE AI+RV+ G+EKK +V+ K E++TVAYHE+GHA+AGWFL+HA+PLLKV+I+PRG
Sbjct: 529 HFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGKG- 587
Query: 621 LGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVA 680
LG+AQY+P E L +K+QL D CMTLGGR AE++ G+I+TGAQ+DL+KVT+M Y+QV
Sbjct: 588 LGYAQYLPKEQYLYSKDQLLDRMCMTLGGRVAEEIFFGRITTGAQDDLQKVTQMAYSQVV 647
Query: 681 VYGFSDKVGLLSFPQREDTFEMS--KPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKE 738
+G S+KVG LSF + EM+ KPYS T +ID EVR+ V A RT L+ E +
Sbjct: 648 KFGMSEKVGPLSF-ETPAPGEMAFDKPYSEATAQLIDQEVRDLVMNALRRTRDLLLEKRS 706
Query: 739 HVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQG 781
+ ++A LLEKE+L+++D++ ++G+RPF E Y+ G
Sbjct: 707 DIERVALRLLEKEILNREDMIELVGKRPFV--EKNTYEEMVSG 747
Score = 70 (29.7 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 82 RFFSSESPKNKKNFENFYPXXXXXXXXXXXXXXXXXXXXNTDDHGNFQDTFMKQFQNLIT 141
R+F+S+ P + K F F N + N + F +Q +
Sbjct: 72 RYFASK-PNDLKKF--FRKEASTDNKESSSSSDKKDSKGNKGEDNNPFNQFPGGWQQIAV 128
Query: 142 PLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSS 196
+ ++ L L +F + + ++IS++EF + LE GLV+ + V +K ++ V SS
Sbjct: 129 SVGIL-LALYAF-MDYQSYREISWKEFYSDFLEAGLVERLEVVDKRWVRI-VSSS 180
Score = 59 (25.8 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 19/54 (35%), Positives = 23/54 (42%)
Query: 215 SKG-HGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNEL 267
S G + GQ YFNIGSV L D +PV Y SE + E+
Sbjct: 179 SSGKYAGQ-TCYFNIGSVDSFERSLGAAQHHLQYDADRQIPVLYKSEFNFKREI 231
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 1408 (500.7 bits), Expect = 1.2e-149, Sum P(2) = 1.2e-149
Identities = 288/574 (50%), Positives = 379/574 (66%)
Query: 226 FNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXXXXXXX 285
F IGSV L I P D +P+ Y+ + L F P
Sbjct: 187 FTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSSPFTFLFPFLPTIILLGGLYFITR 246
Query: 286 XXXXXX-XXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF 344
+FN+GK+ +K K+ F++VAGCDEAKQEIMEFVHF
Sbjct: 247 KINSSPPNANGGGGGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHF 306
Query: 345 LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGP 404
LKNP KY LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMFVGVG
Sbjct: 307 LKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGA 366
Query: 405 SRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX-XNDERESTLNQLLVEMDGFGTT 463
SRVR+LF +AR APSIIFIDEID NDERE+TLNQLLVEMDGF T+
Sbjct: 367 SRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTS 426
Query: 464 AGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLD----HEP 519
VVV+AGTNRPD+LD AL+RPGRFDR I ID PD+ GR QI+ V+LK++ LD +
Sbjct: 427 DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDM 486
Query: 520 SYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
+ S +LA LTPGF GADIAN CNEAALIAAR + +T+ HFE AI+RVI GLEKK +V
Sbjct: 487 NNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRV 546
Query: 580 ISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQL 639
+SK E+R+VAYHE+GHAV GWFL++A+PLLKV+I+PRG ALG+AQY+P + L+++EQ
Sbjct: 547 LSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQF 606
Query: 640 FDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDT 699
M LGGR +E++ +++GA +D +KVT+M A V G S K+G LSF Q +
Sbjct: 607 RHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN 666
Query: 700 FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 759
F+++KP+S+KT ID EV+ V A+ +L+ ++ + V +A+ LL KE + ++D++
Sbjct: 667 FKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMI 726
Query: 760 RVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
R+LG RPFK + F++ + + + ++ PPE
Sbjct: 727 RLLGPRPFKERN----EAFEK-YLDPKSNTEPPE 755
Score = 74 (31.1 bits), Expect = 1.2e-149, Sum P(2) = 1.2e-149
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 123 DDHGNFQDTFM-KQFQNL----ITPLLVIALFLSSFSLSPREQQQI-SFQEFKNKLLEPG 176
++ G+ + F K+F N I ++ L S + S + ++ +FQ+FK K LE G
Sbjct: 102 NEFGSLSEYFRSKEFANTMFLTIGFTIIFTLLTPSSNNSGDDSNRVLTFQDFKTKYLEKG 161
Query: 177 LVDHIVVSNK 186
LV I V NK
Sbjct: 162 LVSKIYVVNK 171
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 799 (286.3 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 178/360 (49%), Positives = 222/360 (61%)
Query: 156 SPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSPHNQTIEDDFHGPVSGTPS 215
S E QQ++FQ+F +E GLV + V NK+V + + I G VS
Sbjct: 130 SESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEA--------ELIP----GAVSNISH 177
Query: 216 KGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXX 275
+G Y F IGS+ L I ++ +PV Y W + +M P
Sbjct: 178 NRNGKPY-VVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVL 236
Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAK 335
IF IGK+ ++ + K+ F+DVAGCDE+K
Sbjct: 237 LIGGLYYLTMRRMPGGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESK 296
Query: 336 QEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDF 395
+EIMEFV FL++P KYE LGAKIP+GA+L GPPGTGKTLLAKATAGE+GVPFLS+SGS+F
Sbjct: 297 EEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEF 356
Query: 396 MEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLV 455
+EMFVGVG SRVR+LF+ AR+ AP+IIF+DEID NDERE+TLNQLLV
Sbjct: 357 VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGG-NDERENTLNQLLV 415
Query: 456 EMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKL 515
EMDGF TT VVV+AGTNRPDILDKALLRPGRFDR I+ID PD++GR QIF+V+L K+KL
Sbjct: 416 EMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKL 475
Score = 646 (232.5 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 134/316 (42%), Positives = 201/316 (63%)
Query: 498 DIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQV 557
D K +D F Y +++K + E + RLAALTPGFAGADIAN CNE ALIAAR + V
Sbjct: 482 DAKQKDVDFSKY-QQLK-NEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 558 TMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 617
HFE AI+RVI GLEKK++++S E++TVAYHE+GHA+ GWFL++A+PL+KV+I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 618 TAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYA 677
ALG+AQY+P + L ++EQ MTLGGR +E++ +++GA +D +K+T+M
Sbjct: 600 QGALGYAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQ 659
Query: 678 QVAVYGFSDKVGLLSFPQREDT---FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIE 734
+ G SDK+G + + D F++ YS T IID EV+ + ++Y +L+
Sbjct: 660 MILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLT 719
Query: 735 EHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPET 794
E + V ++AE L +KEVL ++D++++ G RPF +D++ QG + + +
Sbjct: 720 EKLDLVDKVAEELFKKEVLTREDMIKICGPRPFPERN-DAFDKYLQGEDAFKGKPKSKDQ 778
Query: 795 GTVDDGSSPLEPQVAP 810
+ DDG+S P AP
Sbjct: 779 NSNDDGAS--SPSSAP 792
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 799 (286.3 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 178/360 (49%), Positives = 222/360 (61%)
Query: 156 SPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSPHNQTIEDDFHGPVSGTPS 215
S E QQ++FQ+F +E GLV + V NK+V + + I G VS
Sbjct: 130 SESEIQQLTFQDFITNYIEKGLVTKLTVVNKAVVEA--------ELIP----GAVSNISH 177
Query: 216 KGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXX 275
+G Y F IGS+ L I ++ +PV Y W + +M P
Sbjct: 178 NRNGKPY-VVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVL 236
Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAK 335
IF IGK+ ++ + K+ F+DVAGCDE+K
Sbjct: 237 LIGGLYYLTMRRMPGGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESK 296
Query: 336 QEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDF 395
+EIMEFV FL++P KYE LGAKIP+GA+L GPPGTGKTLLAKATAGE+GVPFLS+SGS+F
Sbjct: 297 EEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEF 356
Query: 396 MEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLV 455
+EMFVGVG SRVR+LF+ AR+ AP+IIF+DEID NDERE+TLNQLLV
Sbjct: 357 VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGG-NDERENTLNQLLV 415
Query: 456 EMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKL 515
EMDGF TT VVV+AGTNRPDILDKALLRPGRFDR I+ID PD++GR QIF+V+L K+KL
Sbjct: 416 EMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKL 475
Score = 646 (232.5 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 134/316 (42%), Positives = 201/316 (63%)
Query: 498 DIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQV 557
D K +D F Y +++K + E + RLAALTPGFAGADIAN CNE ALIAAR + V
Sbjct: 482 DAKQKDVDFSKY-QQLK-NEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 558 TMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 617
HFE AI+RVI GLEKK++++S E++TVAYHE+GHA+ GWFL++A+PL+KV+I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 618 TAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYA 677
ALG+AQY+P + L ++EQ MTLGGR +E++ +++GA +D +K+T+M
Sbjct: 600 QGALGYAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQ 659
Query: 678 QVAVYGFSDKVGLLSFPQREDT---FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIE 734
+ G SDK+G + + D F++ YS T IID EV+ + ++Y +L+
Sbjct: 660 MILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLT 719
Query: 735 EHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPET 794
E + V ++AE L +KEVL ++D++++ G RPF +D++ QG + + +
Sbjct: 720 EKLDLVDKVAEELFKKEVLTREDMIKICGPRPFPERN-DAFDKYLQGEDAFKGKPKSKDQ 778
Query: 795 GTVDDGSSPLEPQVAP 810
+ DDG+S P AP
Sbjct: 779 NSNDDGAS--SPSSAP 792
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
Identities = 301/578 (52%), Positives = 392/578 (67%)
Query: 221 QYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXXXXX 280
QY +FNIGSV LGI+ + VPV Y++E + L+ P
Sbjct: 1 QY-VWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLSMLPTALIIAFL 58
Query: 281 XXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIME 340
+F++G+ KV K+ + V F+DVAGC+EAK EIME
Sbjct: 59 LYTIRRGPAGIGRSGRGMGG---LFSVGET-TAKVLKDEID-VKFKDVAGCEEAKLEIME 113
Query: 341 FVHFLKNPRKYEDLGAKIPK-GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMF 399
FV+FLKNP++Y+DLGAKIPK GA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMF
Sbjct: 114 FVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMF 173
Query: 400 VGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDG 459
VGVGP+RVR+LF AR+ AP I+FIDEID + E+E+TLNQLLVEMDG
Sbjct: 174 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDG 232
Query: 460 FGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDH-- 517
F TT VV++AGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+V+L+ +KLD
Sbjct: 233 FNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTL 292
Query: 518 EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKN 577
E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI+RVIGGLEKK
Sbjct: 293 EKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKT 352
Query: 578 KVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKE 637
+V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKE
Sbjct: 353 QVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKE 411
Query: 638 QLFDMTCMTLGGRAA-EQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP-Q 695
QL D CMT G + G+I+TGAQ+D KVT+ YAQ+ +G ++KVG +SF
Sbjct: 412 QLLDRMCMTPGWPCGPRKSSFGRITTGAQDD-RKVTQSAYAQIVQFGMNEKVGQISFDLP 470
Query: 696 REDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQ 755
R+ + KPYS T +ID EVR + AY RTV L+ E K V ++A LLLEKEVL +
Sbjct: 471 RQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDK 530
Query: 756 DDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
++++ +LG RPF +E + Y+ F +G ++ ++ PE
Sbjct: 531 NNMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 566
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 1359 (483.5 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 279/574 (48%), Positives = 378/574 (65%)
Query: 218 HGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDFVPVTYVSEMVWYNELMRFAPXXXXX 277
H Q + YF IGSV I P VP+ Y ++ L+ F P
Sbjct: 273 HNQQKRLYFTIGSVESFERNLREAQDKYDIPPQLRVPIHYTTKGNMARFLINFLPTLLFL 332
Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXIFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQE 337
GK+ K ++ K+ F+DVAG EAKQE
Sbjct: 333 GAIYWMTKKAASSMGGMGP--------MGFGKSTAKKFNQETDVKIKFKDVAGMAEAKQE 384
Query: 338 IMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFME 397
+MEFV FL+NP KYE LGAKIP+GA+L GPPGTGKTLLAKATAGE+GVPF S+SGS+F+E
Sbjct: 385 VMEFVKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVE 444
Query: 398 MFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEM 457
MFVGVG SRVR+LF+ AR+ APSI+F+DEID NDERE+TLNQLLVEM
Sbjct: 445 MFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDERETTLNQLLVEM 504
Query: 458 DGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKL-- 515
DGF T+ VVV+AGTNRPDILD+AL+RPGRFDR + ID P++ GR +IF V+L+KI L
Sbjct: 505 DGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQKITLQK 564
Query: 516 DHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEK 575
D +P S RLAALTPGF+GADIANVCNEAALIAAR VT+ HFE AI+RVIGG+EK
Sbjct: 565 DIDPDL-SGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELAIERVIGGVEK 623
Query: 576 KNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLT 635
K+K+++ E++ VAYHE+GHA+ GW+L++A PLLKV+I+PRG ALG+AQY+P + L++
Sbjct: 624 KSKLLNPEEQKIVAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQYLPPDQYLMS 683
Query: 636 KEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQ 695
QL+D MTLGGR +E++ +++GA +D +KVT + + V +G S VG++++
Sbjct: 684 TLQLYDRMIMTLGGRVSEELHFASVTSGAHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYD 743
Query: 696 REDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQ 755
+++KP+S +T IID+EV+ V Y + QL+ E + V +A+ LL+KE + +
Sbjct: 744 TRSQDDLTKPFSDETSRIIDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITR 803
Query: 756 DDLLRVLGERPFKSSELTNYDRFKQG---FEEEE 786
+D++R+LG+RPF + +D++ G F+ E+
Sbjct: 804 EDMIRLLGKRPFPETN-DAFDKYLDGKPAFKNEQ 836
Score = 65 (27.9 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 137 QNLITPLLVIALFLSSFSL---SPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFV 193
+N+ LV +L +S L S + +I+FQ F L LV + V N SV +V +
Sbjct: 207 KNIFIYTLVFSL-ATSLILGMGSSNDDTEINFQSFVTDYLTKNLVKKVTVINNSVVEVEL 265
Query: 194 R---SSPHNQ 200
+S HNQ
Sbjct: 266 NENGASQHNQ 275
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 1229 (437.7 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 251/468 (53%), Positives = 324/468 (69%)
Query: 305 FNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALL 364
F I H V+ + K+ F+DVAGC EAK EI EFV +LKNP ++ LGAK+P+GALL
Sbjct: 266 FTIIDPH--SVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALL 323
Query: 365 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 424
GPPG GKTLLAKA A ES VPF+S++GS+F+E+ G+G SR+R LF+EAR AP II+I
Sbjct: 324 TGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYI 383
Query: 425 DEIDXXXXXXXXXXXXXX-----NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILD 479
DEID + E E TLNQLLVEMDG G+ GVVV+A TNR D+LD
Sbjct: 384 DEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLD 443
Query: 480 KALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIA 539
KALLRPGRFDR I+ID P + R +F++Y++KIKLDH P YSQRLAALTPGF GADI
Sbjct: 444 KALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIM 503
Query: 540 NVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAG 599
NVCNE+A+ AA + VT + E A+DRV+ G EK+++ + + ER VAYHE+GHA+ G
Sbjct: 504 NVCNESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVG 563
Query: 600 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGK 659
W LEH + LLKVTI+PR +AALGFAQY P + L +K++LFD CM LGGR AE + G+
Sbjct: 564 WMLEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELFDRMCMMLGGRCAENLKFGR 623
Query: 660 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVR 719
++GAQ+DL+KVTK YAQV +YG S VG LSFP E F++ KPYS K + D E
Sbjct: 624 ATSGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTEG-FQI-KPYSKKFASTFDQEAT 681
Query: 720 EWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF 767
V KA T LI+ + + + IA+ LL++EVL+ +D+ +++G F
Sbjct: 682 LIVAKANEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLIGTPKF 729
Score = 65 (27.9 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 121 NTDDHGNFQDTF-MKQFQNLITPLLVIALFLSS--FSLSPR-----EQQQISFQEFKNKL 172
N + GN D KQ + L I+LF F LSP+ +IS+ EF N+L
Sbjct: 88 NENGGGNKGDNDPRKQLMEKMKRWLAISLFAYGILFILSPKGAAAVTADKISWSEFINEL 147
Query: 173 LEPGLVDHIVV-SNKSVAKVF 192
L G V I++ K VA ++
Sbjct: 148 LPTGQVYRIIILPEKDVAYLY 168
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 1219 (434.2 bits), Expect = 8.0e-127, Sum P(2) = 8.0e-127
Identities = 247/474 (52%), Positives = 332/474 (70%)
Query: 305 FN-IGKAHVTKVDK-NAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGA 362
FN +G+A T VD + V FRDVAG EAKQE+ EFV +LK+P KY+ LGAK+P+GA
Sbjct: 318 FNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGA 377
Query: 363 LLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSII 422
LL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM G+G +RVR+LF+E ++ AP II
Sbjct: 378 LLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCII 437
Query: 423 FIDEIDXXXXXXXXXXXXX--XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDK 480
+IDEID + E E TLNQLLVEMDG T GV+++A TNR DILDK
Sbjct: 438 YIDEIDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDK 497
Query: 481 ALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIAN 540
ALLRPGRFDR I ID P + R +IF+ +L +KL+ P+ +SQRLA LTPGF+GADIAN
Sbjct: 498 ALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIAN 557
Query: 541 VCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW 600
VCNEAAL AAR +V+ ++ E A++R++GG EK++ +S ER+ +AYHESGHA+ GW
Sbjct: 558 VCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGW 617
Query: 601 FLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKI 660
L +++ LLKVTIVPR + ALGFAQY P+E L +KE+LFD CM LGGRAAE ++ +I
Sbjct: 618 MLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRI 677
Query: 661 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTF---EMS----KPYSSKTGAI 713
+TGAQNDLEKVTK+ Y+Q+ +G +D +G + ++T M KP+S ++
Sbjct: 678 TTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESM 737
Query: 714 IDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF 767
ID E R V AY T ++ H++ + ++AE LLEKE L D +++++G P+
Sbjct: 738 IDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQLIGPPPY 791
Score = 47 (21.6 bits), Expect = 8.0e-127, Sum P(2) = 8.0e-127
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 143 LLVIALFLSSFSL--SPREQQQ------ISFQEFKNKLLEPGLVDHIVV 183
L I +F++ FSL +PR ++ +S+ EF + +L G V +++
Sbjct: 173 LFTIYMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVGEVKELII 221
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 1200 (427.5 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
Identities = 241/465 (51%), Positives = 320/465 (68%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD + V F+DVAG EAK E+ EFV +LKNP +Y LGAK+PKG+L
Sbjct: 278 FNQLKMAKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSL 337
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++GS+F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 338 LLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVY 397
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GTT V+V+A TNR DILD AL+
Sbjct: 398 IDEIDAVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALM 457
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGR DR I ID P ++ R +IF+ +LK +KL +YS RLA LTPGF+GADIAN+CN
Sbjct: 458 RPGRLDRHIFIDLPTLQERKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICN 517
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AAR + FE A++RVI G KK+K++SK E+R VA+HESGHA+ GW LE
Sbjct: 518 EAALHAAREGFKSIDTFSFEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLE 577
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H E ++KV+I PR AALGFAQ +P + L TKEQLF+ CM LGGRA+E + K++TG
Sbjct: 578 HTEAVMKVSIAPRTNAALGFAQILPRDQFLFTKEQLFERMCMALGGRASEAITFNKVTTG 637
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSK-PYSSKTGAIIDAEVREWV 722
AQ+DL KVT++ Y+ V YG D VG +SFP E+ + + P+S +D E + +
Sbjct: 638 AQDDLRKVTRVAYSMVKQYGMVDSVGQVSFPDSENQSGIGRRPFSQGLQQQMDLEAKMLI 697
Query: 723 GKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF 767
KAY T +L+ ++++ + +A LLE+EV++ +D+ +LG PF
Sbjct: 698 AKAYRHTEKLLLDNRDKLILLANALLEREVVNYNDIEALLGPPPF 742
Score = 64 (27.6 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
Identities = 25/125 (20%), Positives = 49/125 (39%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L +IA+ +S + IS+ +F N++L G V + VV + +++
Sbjct: 127 QMYRERLRTLFIIAVIMSLLNSINTSGGNISWNDFVNEMLAKGEVSRVQVVPESDIVEIY 186
Query: 193 VRSSPHNQTIEDDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHDF 252
+ H + + G P Y + ++ L ID D
Sbjct: 187 L----HPGAV-------IFGRPRLA----LMYRMQVANIDKFEEKLRAAEEELNIDAKDR 231
Query: 253 VPVTY 257
+PVTY
Sbjct: 232 IPVTY 236
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 276/669 (41%), Positives = 390/669 (58%)
Query: 133 MKQFQNLITPLLVIALFLSSFSLSP-REQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKV 191
+++ + L+ L++ LF F++S RE IS+ F N++L G V I V
Sbjct: 109 LERLRALLIITLIVLLF--RFTVSENREGTNISWNYFINEMLSKGEVQRIEVV------- 159
Query: 192 FVRSSPHNQTIEDDFHGPVSGTPSKGHGGQYKYYFNIGSVXXXXXXXXXXXXTLGIDPHD 251
P + +E H P GTP Y + ++ L ID +
Sbjct: 160 -----PESDIVEIYLH-P-GGTPHGQVNVTLLYTMRVANIDKFEEKLRAAEDELNIDERE 212
Query: 252 FVPVTYVSEMVWYNELMRFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFN-IGKA 310
+PV+Y + N+++ FN + A
Sbjct: 213 RIPVSYKHPGFYGNDVISLLVTLVAVSMLWSIFRLIRVAGRAGGFNA------FNQLKMA 266
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGT 370
T VD + + F+DVAG EAK E+ EFV +LKNP +Y LGAK+PKGALL+GPPG
Sbjct: 267 RFTIVDGKSGKGIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGC 326
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A E+ VPFL+++GS+F+E+ G+G +RVR+LF+EA+ AP I++IDEID
Sbjct: 327 GKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAV 386
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E E TLNQLLVEMDG GTT V+V+A TNR D+LD AL+RPGR DR
Sbjct: 387 GKKRSTNVSGFANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDR 446
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
I ID P ++ R +IF+ +LK +KL + S+YSQ LA LTPGF+GADIAN+CNEAAL AA
Sbjct: 447 HIFIDLPTLQERREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAA 506
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLK 610
R + + +FE A++RVI G K+NK++S ER+ VA+HESGHA+ GW LEH E ++K
Sbjct: 507 REGHKSIDTFNFEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMK 566
Query: 611 VTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEK 670
V+I PR AALGFAQ +P E L TKEQL + CM LGGR +E + K++TGAQ+DL++
Sbjct: 567 VSIAPRTNAALGFAQILPREQYLFTKEQLLERMCMALGGRVSEAITFNKVTTGAQDDLKR 626
Query: 671 VTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSK-PYSSKTGAIIDAEVREWVGKAYVRT 729
VTK+ Y+ V YG +G +SFP E T + + P+S ++D E + V +AY RT
Sbjct: 627 VTKIAYSMVKQYGMVPSIGQISFPDGESTVGIGRRPFSQGLQQMMDHEAKVLVAQAYRRT 686
Query: 730 VQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELT------NYDRFKQGFE 783
+L+ ++++ + ++ LLEKEV++ DD+ ++G P+ ++ +R KQ
Sbjct: 687 EKLLLDNRDKLQTLSNALLEKEVINYDDIEALIGPPPYGPKKMIAPQSWLQAERDKQDTR 746
Query: 784 EEEKSSAPP 792
+EE PP
Sbjct: 747 DEEMPQQPP 755
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 1201 (427.8 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 247/508 (48%), Positives = 340/508 (66%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GTT V+V+A TNR DILD ALL
Sbjct: 407 IDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALL 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGR DR + ID P ++ R +IF+ +LK +KL S+YSQRLA LTPGF+GADIAN+CN
Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICN 526
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AAR ++ V +FE A++RVI G KK+K++SK E++ VA+HESGHA+ GW LE
Sbjct: 527 EAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLE 586
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H E ++KV+I PR AALGFAQ +P + L TKEQLF+ CM LGGR +E + K+++G
Sbjct: 587 HTEAVMKVSIAPRTNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRVSETISFNKVTSG 646
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED--TFEMSKPYSSKTGAIIDAEVREW 721
AQ+DL KVT++ Y+ V +G + +G +SFP+ ++ T +P+S ++D E +
Sbjct: 647 AQDDLRKVTRIAYSMVKQFGMAPSIGPISFPEVQEGLTGIGRRPFSQGLQQMMDHEAKLL 706
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSEL------TNY 775
V KAY T ++++++ + + +A LLEKEV++ +D+ ++G P ++ +
Sbjct: 707 VAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWSEA 766
Query: 776 DRFKQGFEEEEKSSAPPETGTVDDGSSP 803
+R KQ EEE PP G D+ S P
Sbjct: 767 EREKQDAGEEEAPQQPPLRG--DEPSWP 792
Score = 57 (25.1 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L VIA+ +S + IS+ +F +++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLFVIAVVMSLLNALSTSGGNISWNDFVHEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 1186 (422.6 bits), Expect = 8.1e-125, Sum P(2) = 8.1e-125
Identities = 243/502 (48%), Positives = 339/502 (67%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GTT V+V+A TNR DILD AL+
Sbjct: 407 IDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALM 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGR DR + ID P ++ R +IF+ +LK +KL ++YSQRLA LTPGF+GADIAN+CN
Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICN 526
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AAR ++ V +FE A++RV+ G KK+K++SK E++ VA+HESGHA+ GW LE
Sbjct: 527 EAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLE 586
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H E ++KV+I PR AALGFAQ +P + L TKEQLF+ CM LGGRA+E + ++++G
Sbjct: 587 HTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSG 646
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQ-REDTFEMSK-PYSSKTGAIIDAEVREW 721
AQ+DL KVT++ Y+ V +G + +G +SFP+ +E + + P+S ++D E R
Sbjct: 647 AQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLL 706
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRF--- 778
V KAY T ++++++ + + +A LLEKEV++ +D+ ++G P ++ R+
Sbjct: 707 VAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWIDA 766
Query: 779 ---KQ--GFEEEEKSSAPPETG 795
KQ G EE E++ PP G
Sbjct: 767 QREKQDLGEEETEETQQPPLGG 788
Score = 61 (26.5 bits), Expect = 8.1e-125, Sum P(2) = 8.1e-125
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + LLVIA+ +S + IS+ +F +++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLLVIAVVMSLLNALSTSGGSISWNDFVHEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 1182 (421.1 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
Identities = 238/492 (48%), Positives = 334/492 (67%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GTT V+V+A TNR D+LD AL+
Sbjct: 407 IDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALM 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGR DR + ID P ++ R +IF+ +LK +KL S+YSQRLA LTPGF+GADIAN+CN
Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICN 526
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AAR ++ V +FE A++RVI G KK+K++SK E+R VA+HESGHA+ GW LE
Sbjct: 527 EAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLE 586
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H E ++KV+I PR AALGF+Q +P + L TKEQLF+ CM LGGRAAE + ++++G
Sbjct: 587 HTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSG 646
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQ-REDTFEMSK-PYSSKTGAIIDAEVREW 721
AQ+DL KVT++ Y+ V +G + +G +SFP+ +E + + P+S ++D E +
Sbjct: 647 AQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAKLL 706
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQG 781
V KAY T +++ ++ + + +A LLEKEV++ +D+ ++G P ++ ++
Sbjct: 707 VAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQKWIDA 766
Query: 782 FEEEEKSSAPPE 793
E+E ++S E
Sbjct: 767 -EKERQASGEEE 777
Score = 62 (26.9 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L +IAL +S + IS+ +F N++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLFIIALVMSLLNSLSTSGGSISWADFVNEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 1179 (420.1 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 238/494 (48%), Positives = 330/494 (66%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GTT V+V+A TNR DILD ALL
Sbjct: 407 IDEIDAVGKKRSTAVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALL 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGR DR + ID P ++ R +IF+ +LK +KL S+YSQRLA LTPGF+GADIAN+CN
Sbjct: 467 RPGRLDRHVFIDLPTLQERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICN 526
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AAR ++ V + + A++RV+ G KK+KV+SK E++ VA+HESGHA+ GW LE
Sbjct: 527 EAALHAAREGHTAVHTSNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLE 586
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
H E ++KV+I PR AALGFAQ +P + L T+EQLF+ CM LGGRA+E + ++++G
Sbjct: 587 HTEAVMKVSITPRTNAALGFAQMLPRDQHLFTREQLFERMCMALGGRASESISFNRVTSG 646
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED--TFEMSKPYSSKTGAIIDAEVREW 721
AQ+DL KVT++ Y+ V +G + +G +SFP+ ++ T +P+S +ID E R
Sbjct: 647 AQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGVTGIGRRPFSQGLQQMIDHEARLL 706
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQG 781
V AY T Q++ ++ + + +A LLEKEV++ +D+ ++G P + ++
Sbjct: 707 VATAYRHTEQVLRDNLDKLHALASALLEKEVINYEDIEALIGPPPHGPKKKIAPQKWSDA 766
Query: 782 FEEEEKSSAPPETG 795
+ EK + E G
Sbjct: 767 --QREKQDSGEEEG 778
Score = 57 (25.1 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L VIA+ +S + IS+ +F +++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLFVIAVIMSLLNALGSSGGNISWNDFVHEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1131 (403.2 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 239/498 (47%), Positives = 326/498 (65%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+ N GK+ K+ + K KV FRDVAG DE KQE++E V FLK+PRK+ ++GA+IPKG L
Sbjct: 141 VMNFGKSKA-KLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVL 199
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
LVGPPGTGKTLLA+A AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ AP IIF
Sbjct: 200 LVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIF 259
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID +DERE TLNQLLVEMDGFG G+++IA TNRPDILD ALL
Sbjct: 260 IDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALL 318
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFDRQIT+D+PD+ GR+ + +V+ + LD + + +A TPGF+GAD+ N+ N
Sbjct: 319 RPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINL--RAIATRTPGFSGADLENLLN 376
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL+AAR + ++ M + A DRVI G KK++VIS+ ER VA+HE+GH V G L+
Sbjct: 377 EAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLD 436
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKIST 662
A+ + KVTIVPRG A G+A +P E+ +TK +L D LGGR AE+++ G++ST
Sbjct: 437 EADVVHKVTIVPRGQAG-GYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVFGEVST 495
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED-------TFEMSKPYSSKTGAIID 715
GA ND ++ T + V +G SDK+G + F + F + YS ID
Sbjct: 496 GAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEID 555
Query: 716 AEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRV-----LGERPFKSS 770
E++ + + Y R Q++ ++++ + IA+ LLE E L + + + L ERP S+
Sbjct: 556 MEMQTIMKECYARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHLCDYGRLPERPTSSA 615
Query: 771 EL-TNYDRFKQGFEEEEK 787
++ N + K E E+K
Sbjct: 616 DVKVNINMKKDDEESEDK 633
Score = 49 (22.3 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 136 FQNLITPLLVIALFL---SSFSLSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVF 192
F+N I LL+ + + S F+ S ++ +S+ +F KL E G V ++ + K+ VF
Sbjct: 5 FRNTIFYLLIFLVVIGIVSYFNGSTQKTTSVSYDKFITKL-EKGEVRNVQLQPKN--GVF 61
Query: 193 -VRSSPHNQTIEDDF 206
V+ +N + + F
Sbjct: 62 EVKGQFNNSSQGEQF 76
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 233/468 (49%), Positives = 315/468 (67%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+ + GK+ K+ + K +V F DVAG DE K+E+ E V FLKNPRKY +LGA+IPKG L
Sbjct: 137 VMSFGKSRA-KLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVL 195
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L G PGTGKTLLA+A AGE+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP I+F
Sbjct: 196 LFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVF 255
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID +DERE TLNQLLVEMDGF + G+++IA TNRPDILD ALL
Sbjct: 256 IDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALL 314
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFDR I +D PDI GR +I +V++K L + LA TPGF GAD+AN+ N
Sbjct: 315 RPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDL--DVLARRTPGFTGADLANMVN 372
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL+AAR + ME E AI+RVI G EKK+KVIS+ E+R VAYHE+GHA+ G+ L
Sbjct: 373 EAALLAARRNKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLP 432
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKIST 662
H +P+ K++I+PRG A G+ +P E+ +TK QL D M LGGR AE ++L IST
Sbjct: 433 HTDPVHKISIIPRGRAG-GYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDIST 491
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQ-REDTF---EMSKP--YSSKTGAIIDA 716
GA+NDLE+ T+ V YG S+++G L+F + E F ++++ YS + ID
Sbjct: 492 GARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDK 551
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
EVR+ + Y R ++++++ + +A L+E E + ++ +++ E
Sbjct: 552 EVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 233/468 (49%), Positives = 315/468 (67%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+ + GK+ K+ + K +V F DVAG DE K+E+ E V FLKNPRKY +LGA+IPKG L
Sbjct: 137 VMSFGKSRA-KLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVL 195
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L G PGTGKTLLA+A AGE+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP I+F
Sbjct: 196 LFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVF 255
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID +DERE TLNQLLVEMDGF + G+++IA TNRPDILD ALL
Sbjct: 256 IDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALL 314
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFDR I +D PDI GR +I +V++K L + LA TPGF GAD+AN+ N
Sbjct: 315 RPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDL--DVLARRTPGFTGADLANMVN 372
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL+AAR + ME E AI+RVI G EKK+KVIS+ E+R VAYHE+GHA+ G+ L
Sbjct: 373 EAALLAARRNKKVINMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLP 432
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKIST 662
H +P+ K++I+PRG A G+ +P E+ +TK QL D M LGGR AE ++L IST
Sbjct: 433 HTDPVHKISIIPRGRAG-GYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDIST 491
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQ-REDTF---EMSKP--YSSKTGAIIDA 716
GA+NDLE+ T+ V YG S+++G L+F + E F ++++ YS + ID
Sbjct: 492 GARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDK 551
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
EVR+ + Y R ++++++ + +A L+E E + ++ +++ E
Sbjct: 552 EVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 632 (227.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 135/269 (50%), Positives = 177/269 (65%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GT V+V+A TNR D+LD AL+
Sbjct: 407 IDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALM 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAG-ADIANVC 542
RPGR DR + ID P ++ R +IF+ +LK +KL S+YSQRLA LTPGF+G A + +
Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKSKIL 526
Query: 543 N-EAALIAARGENSQVT----MEHFEAAI 566
+ E + A E+ +EH EA +
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVM 555
Score = 450 (163.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 88/224 (39%), Positives = 144/224 (64%)
Query: 572 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 631
G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P +
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ 577
Query: 632 LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLL 691
L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V +G + +G +
Sbjct: 578 YLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 692 SFPQREDTFEM--SKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLE 749
SFP+ ++ +P+S ++D E R V +AY T +++ ++ + + +A LLE
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 750 KEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
KEV++ +D+ ++G P ++ ++ E+E+++S E
Sbjct: 698 KEVINYEDIEALIGPPPHGPKKMIAPQKWIDA-EKEKQASGEEE 740
Score = 60 (26.2 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L +IA+ +S + IS+ +F N++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLFIIAIVMSLLNSLSTSGGSISWADFVNEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 632 (227.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 135/269 (50%), Positives = 177/269 (65%)
Query: 305 FN-IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
FN + A T VD V F+DVAG EAK E+ EFV +LK+P ++ LGAK+PKGAL
Sbjct: 287 FNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGAL 346
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L+GPPG GKTLLAKA A E+ VPFL+++G +F+E+ G+G +RVR+LF+EAR AP I++
Sbjct: 347 LLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVY 406
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID N E E TLNQLLVEMDG GT V+V+A TNR D+LD AL+
Sbjct: 407 IDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALM 466
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAG-ADIANVC 542
RPGR DR + ID P ++ R +IF+ +LK +KL S+YSQRLA LTPGF+G A + +
Sbjct: 467 RPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKSKIL 526
Query: 543 N-EAALIAARGENSQVT----MEHFEAAI 566
+ E + A E+ +EH EA +
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVM 555
Score = 450 (163.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 88/224 (39%), Positives = 144/224 (64%)
Query: 572 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 631
G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P +
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ 577
Query: 632 LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLL 691
L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V +G + +G +
Sbjct: 578 YLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 692 SFPQREDTFEM--SKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLE 749
SFP+ ++ +P+S ++D E R V +AY T +++ ++ + + +A LLE
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 750 KEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 793
KEV++ +D+ ++G P ++ ++ E+E+++S E
Sbjct: 698 KEVINYEDIEALIGPPPHGPKKMIAPQKWIDA-EKEKQASGEEE 740
Score = 60 (26.2 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 134 KQFQNLITPLLVIALFLSSFSLSPREQQQISFQEFKNKLLEPGLVDHI-VVSNKSVAKVF 192
+ ++ + L +IA+ +S + IS+ +F N++L G V + VV V +V+
Sbjct: 136 QMYRERLRTLFIIAIVMSLLNSLSTSGGSISWADFVNEMLAKGEVQRVQVVPESDVVEVY 195
Query: 193 V 193
+
Sbjct: 196 L 196
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 238/503 (47%), Positives = 318/503 (63%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+ N GK+ K+ K +V F+DVAG DE KQE++E V FLK+PRK+ +LGA+IPKG L
Sbjct: 140 VMNFGKSKA-KLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVL 198
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
LVGPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ AP +IF
Sbjct: 199 LVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIF 258
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID +DERE TLNQLLVEMDGF G+++IA TNR DILD ALL
Sbjct: 259 IDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALL 317
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFDRQIT+D+PD+ GR+ + +V+ + LD + S +A TPGF+GAD+ N+ N
Sbjct: 318 RPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKS--IAMRTPGFSGADLENLLN 375
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL+AAR ++ + A DRVI G KK++VISK ER VAYHE GH V G L+
Sbjct: 376 EAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLD 435
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLLL-TKEQLFDMTCMTLGGRAAEQVLLGKIST 662
A+ + KVTIVPRG A G+A +P E+ TK +L D LGGR AE+++ G++ST
Sbjct: 436 EADMVHKVTIVPRGQAG-GYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVST 494
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED-------TFEMSKPYSSKTGAIID 715
GA ND ++ T + V +G S+K+G L F Q + F + YS + ID
Sbjct: 495 GAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEID 554
Query: 716 AEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRV-----LGERPFKSS 770
E++ + + Y R Q++ E+++ + IA+ LL+ E L + + + L ER F
Sbjct: 555 QEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERNFSDD 614
Query: 771 ELTNYDRFKQGFEEEEKSSAPPE 793
E + + + EEK E
Sbjct: 615 EKNDDVKVNILTKTEEKKDDTKE 637
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 221/467 (47%), Positives = 302/467 (64%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
I IG + K+ + K KV F DVAG +EAK+E+ E V FLK P +Y LGAKIPKG L
Sbjct: 158 ILGIGSSK--KLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLL 215
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
LVGPPGTGKTLLAKA AGE+ VPF S+SGS F+EMFVGVG SRVR+LF+ A++ AP+I+F
Sbjct: 216 LVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVF 275
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAG-VVVIAGTNRPDILDKAL 482
IDEID NDERE TLNQLL EMDGFGT + V+V+A TNRP++LD AL
Sbjct: 276 IDEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAAL 335
Query: 483 LRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVC 542
LRPGRFDRQ+ +DKPD KGR I +V++K +K+ P + +A LT G AGAD+AN+
Sbjct: 336 LRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKIS--PKVKVEDIARLTAGLAGADLANII 393
Query: 543 NEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFL 602
NEAAL+A R V A++R I GLEKK++ I++ E++ V YHE GHA+
Sbjct: 394 NEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETT 453
Query: 603 EHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKIS 661
+ A+ + KV+++PRG AALG+ P EN L+ K +L + LGGRAAE+V +G+IS
Sbjct: 454 KGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGEIS 513
Query: 662 TGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTF----EMSKPYSSKTGAIIDAE 717
TGA NDLE+ T + A +++YG S+ GL+ ++ +TF + K YS K +D
Sbjct: 514 TGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDY 573
Query: 718 VREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
V++ + + Y + +K + + L E+E + + + ++ E
Sbjct: 574 VKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKE 620
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 222/462 (48%), Positives = 315/462 (68%)
Query: 308 GKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGP 367
GK+ K+ A+ +V F DVAG DEAK+E+ E + FLK+P+K+ LG +IPKG LLVGP
Sbjct: 136 GKSRA-KLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGP 194
Query: 368 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEI 427
PGTGKTLLA+A AGE+GVPF SISGSDF+EMFVGVG SRVR+LF + ++ AP IIFIDEI
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 428 DXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGR 487
D +DERE TLNQLLVEMDGF + GV++IA TNRPD+LD ALLRPGR
Sbjct: 255 DAVGRHRGAGLGGG-HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGR 313
Query: 488 FDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 547
FDRQ+ + +PD+KGR+ I +V+ KK L + +A TPGF+GAD++NV NEAAL
Sbjct: 314 FDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGV--IARGTPGFSGADLSNVVNEAAL 371
Query: 548 IAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 607
+AAR + S V M+ F+ A D+V+ G+E+++ VIS+ E++ AYHE+GH + + +P
Sbjct: 372 LAARKDKSFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDP 431
Query: 608 LLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQN 666
+ KV+I+PRG A LG +P E+ KE L + + +GGRAAE+++ +++TGA N
Sbjct: 432 VHKVSIIPRGRA-LGVTMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEIIFNELTTGAGN 490
Query: 667 DLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTF----EMS--KPYSSKTGAIIDAEVRE 720
D+E+ T++ V +G S+K+G ++F ++E++ +MS K YS T ID E+R+
Sbjct: 491 DIERATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRK 550
Query: 721 WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
+ +Y R QL+ E+ + +A L+EKE L D++ R++
Sbjct: 551 IIDGSYSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRII 592
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 227/486 (46%), Positives = 320/486 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
N K+ + +N +NKV F DVAG DEAK+E++E V FLK+ ++++ LG KIPKG LL+
Sbjct: 137 NFSKSRAKLMTEN-RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
G PGTGKTLLA+A AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP IIFID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID NDERE TLNQLLVEMDGF + GV++IA TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRHRGIGLGGG-NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRP 314
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+TI PDI GR++I V++KK+ P + +A TPGF+GAD+AN+ NEA
Sbjct: 315 GRFDRQVTISIPDINGREKIINVHIKKVPT--APDVNIRTIARGTPGFSGADLANLVNEA 372
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
ALIAAR VTM FE A D+V+ G E+K+ ++++ ERR AYHE+GHA+ +F E +
Sbjct: 373 ALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEAS 432
Query: 606 EPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLF-DMTCMTLGGRAAEQVLLG--KIS 661
+P+ K TI+PRG + LG +P ++ + T+E++ D+T + +GGRAAE+++ G K++
Sbjct: 433 DPIHKATIIPRGRS-LGLVMRLPESDRVSHTREKMIADLT-VAMGGRAAEELIFGYHKVT 490
Query: 662 TGAQNDLEKVTKMTYAQVAVYGFSDKVG-LLSFPQREDTFEMSKPYSSKTGAIIDAEVRE 720
+GA +D+++ T + A V +G SDKVG L + DT S+ +ID EV+
Sbjct: 491 SGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTI------SNNLANLIDEEVKL 544
Query: 721 WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQ 780
V A R L+ EH E + +A+ LLE E L +D+ ++ + ++ K+
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQVLKR 604
Query: 781 GFEEEE 786
F ++
Sbjct: 605 SFASKQ 610
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 227/486 (46%), Positives = 320/486 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
N K+ + +N +NKV F DVAG DEAK+E++E V FLK+ ++++ LG KIPKG LL+
Sbjct: 137 NFSKSRAKLMTEN-RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
G PGTGKTLLA+A AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP IIFID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID NDERE TLNQLLVEMDGF + GV++IA TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRHRGIGLGGG-NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRP 314
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+TI PDI GR++I V++KK+ P + +A TPGF+GAD+AN+ NEA
Sbjct: 315 GRFDRQVTISIPDINGREKIINVHIKKVPT--APDVNIRTIARGTPGFSGADLANLVNEA 372
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
ALIAAR VTM FE A D+V+ G E+K+ ++++ ERR AYHE+GHA+ +F E +
Sbjct: 373 ALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEAS 432
Query: 606 EPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLF-DMTCMTLGGRAAEQVLLG--KIS 661
+P+ K TI+PRG + LG +P ++ + T+E++ D+T + +GGRAAE+++ G K++
Sbjct: 433 DPIHKATIIPRGRS-LGLVMRLPESDRVSHTREKMIADLT-VAMGGRAAEELIFGYHKVT 490
Query: 662 TGAQNDLEKVTKMTYAQVAVYGFSDKVG-LLSFPQREDTFEMSKPYSSKTGAIIDAEVRE 720
+GA +D+++ T + A V +G SDKVG L + DT S+ +ID EV+
Sbjct: 491 SGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTI------SNNLANLIDEEVKL 544
Query: 721 WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQ 780
V A R L+ EH E + +A+ LLE E L +D+ ++ + ++ K+
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQVLKR 604
Query: 781 GFEEEE 786
F ++
Sbjct: 605 SFASKQ 610
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1025 (365.9 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 225/519 (43%), Positives = 325/519 (62%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
+ GK+ ++ + + K F DVAGCDEAK+++ E V +L+ P +++ LG +IP G LLV
Sbjct: 135 SFGKSKARQLSEE-QIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLV 193
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
G PGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP IIFID
Sbjct: 194 GQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 253
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID +DERE TLNQ+LVEMDGF GV+VIA TNRPD+LD ALLRP
Sbjct: 254 EIDAVGRQRGAGMGGG-HDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRP 312
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+T+ PDI+GR+QI +V+++K+ L + ++ +A TPGF+GAD+AN+ NEA
Sbjct: 313 GRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVK--AEVIARGTPGFSGADLANLVNEA 370
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
AL AAR V+M+ F+AA D+++ G E+K+ V+S+ ER AYHE+GHA+ G +
Sbjct: 371 ALCAARTARRVVSMKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDH 430
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KIST 662
+P+ KV+I+PRG A LG Y+P ++ +Q + +L GGR AE+V+ G K+ST
Sbjct: 431 DPVYKVSIIPRGRA-LGVTMYLPEQDRFSHSKQHLESNISSLYGGRVAEEVIYGSDKVST 489
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED------TFEMSKPYSSKTGAIIDA 716
GA ND+E+ T + V +G S+K+G + F + E T S S +T ID
Sbjct: 490 GASNDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDE 549
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEV---LHQDDLLRVLGERP-----FK 768
E++ + + Y R LI+ + + + + + L++ E L DDL+ RP K
Sbjct: 550 EIKSVISRNYQRAEDLIKANMDVLHAMKDCLMKYETIDALQIDDLMARTSVRPPAGWEDK 609
Query: 769 SSELTNYDRFK-QGFEEEEKSSAPPETGTVDDGSSPLEP 806
+N D K + E + ET + + +S ++P
Sbjct: 610 GGSSSNSDDSKGDKAADVEATDKDAETTSDPEETSQVKP 648
Score = 47 (21.6 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 137 QNLITPLLVIALFLSSF-SLSPR--EQQQISFQEF 168
+NLI L++ + +S F S SP E QQ+ + F
Sbjct: 3 KNLILWLVIAVVLMSVFQSFSPNTTEDQQMDYTRF 37
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 215/459 (46%), Positives = 302/459 (65%)
Query: 313 TKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGK 372
+K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK
Sbjct: 249 SKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 308
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP I+FIDEID
Sbjct: 309 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 368
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
NDERE T+NQLL EMDGF +GV+V+A TNRPD+LD ALLRPGRFDRQ+
Sbjct: 369 QRGAGMGGG-NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 427
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
T+D+PD+ GR +I QV+ + L + + ++A TPGF GAD+ N+ NEAA++AAR
Sbjct: 428 TVDRPDVAGRVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARR 485
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVT 612
E +++ + A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++
Sbjct: 486 ELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKIS 545
Query: 613 IVPRGTAALGFAQYVPNENLL----LTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQN 666
I+PRG A G + P+E L ++ L + + LGGR AE+V+ G ++TGA N
Sbjct: 546 IIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASN 604
Query: 667 DLEKVTKMTYAQVAVYGFSDKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVRE 720
D +V+++ + +GFS K+G ++ P K YS T I+DAEVRE
Sbjct: 605 DFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRE 664
Query: 721 WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 759
V KAY R ++I H + + ++A+LL+EKE + ++ +
Sbjct: 665 LVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFM 703
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 215/459 (46%), Positives = 304/459 (66%)
Query: 313 TKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGK 372
+K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK
Sbjct: 237 SKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 296
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP I+FIDEID
Sbjct: 297 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 356
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
NDERE T+NQLL EMDGF +GV+V+A TNRPD+LD ALLRPGRFDRQ+
Sbjct: 357 QRGAGMGGG-NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 415
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
T+D+PD+ GR QI +V+ + + + Y +++A TPGF GAD+ N+ NEAA++AAR
Sbjct: 416 TVDRPDVAGRVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLMNEAAILAARR 473
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVT 612
E +++ + A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++
Sbjct: 474 ELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKIS 533
Query: 613 IVPRGTAALGFAQYVPNENLL----LTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQN 666
I+PRG A G + P+E L ++ L + + LGGR AE+V+ G ++TGA N
Sbjct: 534 IIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASN 592
Query: 667 DLEKVTKMTYAQVAVYGFSDKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVRE 720
D +V+++ V +GFS K+G ++ P + K YS T ++DAEVRE
Sbjct: 593 DFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRE 652
Query: 721 WVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 759
V KAYVR ++I + + ++A+LL+EKE + ++ +
Sbjct: 653 LVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFM 691
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 229/514 (44%), Positives = 317/514 (61%)
Query: 305 FNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALL 364
F GK+ ++ K+ K F DVAG DEA +E+ E FL+NP +Y+ LGAKIPKG LL
Sbjct: 143 FGFGKSRAKQLSKDMP-KTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLL 201
Query: 365 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 424
GPPGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR+LF++A+Q +P IIF+
Sbjct: 202 YGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFV 261
Query: 425 DEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLR 484
DEID +DERE TLNQLLVEMDGFG AGV++IA TNRPDILD ALLR
Sbjct: 262 DEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLR 320
Query: 485 PGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNE 544
PGRFDRQI + PD+ GR + +V+ K + + LA T G GAD+ANV NE
Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVINE 378
Query: 545 AALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEH 604
AAL+ AR + +T E A+DRVIGG +K ++IS+ E++ AYHE GH +A W +
Sbjct: 379 AALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPD 438
Query: 605 AEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TG
Sbjct: 439 IEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTG 497
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSF-PQREDTF---EM-SKP-YSSKTGAIIDAE 717
A +D+E+ TK+ + V +G S K+G + + + D F M ++P YS + ID E
Sbjct: 498 AVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEE 557
Query: 718 VREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDR 777
VR+ + A+ +++ E+++ + +A LLEKE LH+ +L + + K LT +D
Sbjct: 558 VRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDD 616
Query: 778 FKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 811
F ++ P ++ G +P PA
Sbjct: 617 FGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 226/520 (43%), Positives = 330/520 (63%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
+ GK+ K+ + K F DVAGCDEAK+E+ E V +L++P K++ LG +IP G L+V
Sbjct: 138 SFGKSKA-KLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMV 196
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGES VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP IIFID
Sbjct: 197 GPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFID 256
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID +DERE TLNQ+LVEMDGF G++VIA TNRPD+LD ALLRP
Sbjct: 257 EIDAVGRQRGAGLGGG-HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRP 315
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+ + PD++GR+QI +V+++K+ L + + +A TPGF+GAD+AN+ NEA
Sbjct: 316 GRFDRQVVVGLPDVRGREQILKVHMRKVPLSEDVK--ASVIARGTPGFSGADLANLVNEA 373
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
AL AARG V ME FE A D+++ G E+++ V+S+ E+ AYHE+GHA+ G +
Sbjct: 374 ALFAARGNRRVVGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEH 433
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENLLL-TKEQLFDMTCMTLGGRAAEQVLLG--KIST 662
+P+ KVTI+PRG A LG ++P + + ++ +L + GGR AE+++ G K+ST
Sbjct: 434 DPVHKVTIIPRGRA-LGVTFFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVST 492
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTF---EM--SKPYSSKTGAIIDA 716
GA D++ T + V +GFSDK+G L + + E + F M +K S +T +ID
Sbjct: 493 GASQDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDT 552
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQ---DDLLR---VLGERPFKSS 770
EV+ ++ K Y R Q+++++ + + + + L++ E + DDL+ V +++
Sbjct: 553 EVKAFIDKNYSRAKQILQDNVDILHSMKDALMKYETIDSLQIDDLMNRREVRQPADWQAD 612
Query: 771 ELTNYDRFKQGFE-----EEEKSSAPPETGTVDDGSSPLE 805
E + D+ E +E SAP E D SP++
Sbjct: 613 ENGSNDKGNGKGEPAVKVDEVVKSAPAEAELKDADESPVK 652
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 219/499 (43%), Positives = 326/499 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
+ GK+ + ++ + K F DVAGCDEAK+++ E V +L++P +++ LG KIP G L+V
Sbjct: 137 SFGKSKARMMSED-QIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMV 195
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ +P IIFID
Sbjct: 196 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFID 255
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID +DERE TLNQ+LVEMDGF G++VIA TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRQRGAGVGGG-HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRP 314
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKL--DHEPSYYSQRLAALTPGFAGADIANVCN 543
GRFDRQ+ + PD++GR+QI +V+++K+ L D EPS +A TPGF+GAD+AN+ N
Sbjct: 315 GRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSL----IARGTPGFSGADLANLVN 370
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AARG V+M FE A D+++ G E+++ V+S+ + + AYHE+GHAV G +
Sbjct: 371 EAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVP 430
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLL-LTKEQLFDMTCMTLGGRAAEQVLLGK--I 660
+P+ KV+I+PRG A LG Y+P ++ + ++K+ L M GGR AE+++ GK +
Sbjct: 431 EHDPVYKVSIIPRGRA-LGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKV 489
Query: 661 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTF-----EMSKPYSSKTGAII 714
STGA ND+E+ T++ V +GFS+K+G + + + E + F +K S T +I
Sbjct: 490 STGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLI 549
Query: 715 DAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTN 774
D EVR+ + + Y R Q+I ++ + + + + L++ E + + ++ +P
Sbjct: 550 DDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKPVI------ 603
Query: 775 YDRFKQGFEEEEKSSAPPE 793
R G+ E+ K+ + PE
Sbjct: 604 --REPAGWGEQSKTPSAPE 620
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 219/499 (43%), Positives = 326/499 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
+ GK+ + ++ + K F DVAGCDEAK+++ E V +L++P +++ LG KIP G L+V
Sbjct: 137 SFGKSKARMMSED-QIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMV 195
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ +P IIFID
Sbjct: 196 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFID 255
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID +DERE TLNQ+LVEMDGF G++VIA TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRQRGAGVGGG-HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRP 314
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKL--DHEPSYYSQRLAALTPGFAGADIANVCN 543
GRFDRQ+ + PD++GR+QI +V+++K+ L D EPS +A TPGF+GAD+AN+ N
Sbjct: 315 GRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSL----IARGTPGFSGADLANLVN 370
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
EAAL AARG V+M FE A D+++ G E+++ V+S+ + + AYHE+GHAV G +
Sbjct: 371 EAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVP 430
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPNENLL-LTKEQLFDMTCMTLGGRAAEQVLLGK--I 660
+P+ KV+I+PRG A LG Y+P ++ + ++K+ L M GGR AE+++ GK +
Sbjct: 431 EHDPVYKVSIIPRGRA-LGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKV 489
Query: 661 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTF-----EMSKPYSSKTGAII 714
STGA ND+E+ T++ V +GFS+K+G + + + E + F +K S T +I
Sbjct: 490 STGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLI 549
Query: 715 DAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTN 774
D EVR+ + + Y R Q+I ++ + + + + L++ E + + ++ +P
Sbjct: 550 DDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKPVI------ 603
Query: 775 YDRFKQGFEEEEKSSAPPE 793
R G+ E+ K+ + PE
Sbjct: 604 --REPAGWGEQSKTPSAPE 620
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 222/463 (47%), Positives = 309/463 (66%)
Query: 308 GKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGP 367
GK+ ++ + NKV F DVAG DEAK+E+ E V FL+ P+K++ LG KIPKG LL+GP
Sbjct: 140 GKSKA-RLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGP 198
Query: 368 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEI 427
PGTGKTLLAKA AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP +IFIDEI
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEI 258
Query: 428 DXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGR 487
D NDERE TLNQLLVEMDGF GV++IA TNRPD+LD ALLRPGR
Sbjct: 259 DAVGRHRGVGFGGG-NDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGR 317
Query: 488 FDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 547
FDRQITI PDI GR +I +V+LKKI P+ +A TPGF+GAD+AN+ NE+AL
Sbjct: 318 FDRQITISIPDIAGRQKILEVHLKKIPT--APNVEVSIIARGTPGFSGADLANLVNESAL 375
Query: 548 IAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 607
IAAR VT E FE A D+++ G+E+K+ V+ + E+ AYHE+GHA+ LE ++P
Sbjct: 376 IAARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDP 435
Query: 608 LLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGA 664
+ K TI+PRG A LG +P ++ + T+ ++ + +GGRAAEQV+ G K ++GA
Sbjct: 436 IHKATIIPRGRA-LGLVMRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGA 494
Query: 665 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGK 724
+D+++ T + + V +G S+KVG L + ++ D + S + +ID+EV++ V
Sbjct: 495 ASDIKQATHLARSMVTKWGMSEKVGPLLYGEQNDP--NNHILSIEMSNLIDSEVKQLVTD 552
Query: 725 AYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF 767
A +++ E+ E + ++A+ LLE E L +L +L + F
Sbjct: 553 ALKEATKILNENIESLHRVAKALLEYETLTGQELSDLLEGKSF 595
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 230/516 (44%), Positives = 319/516 (61%)
Query: 305 FNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALL 364
F KA + D+ KV F DVAG DEAK+E+ E V FL++P K++ LG K+P G LL
Sbjct: 138 FGRSKARLLSQDQV---KVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLL 194
Query: 365 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 424
VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F +A++ AP IIFI
Sbjct: 195 VGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFI 254
Query: 425 DEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLR 484
DEID +DERE TLNQLLVEMDGF G++V+A TNRPD+LD ALLR
Sbjct: 255 DEIDAVGRHRGAGLGGG-HDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLR 313
Query: 485 PGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNE 544
PGRFDRQ+ + PDIKGR+ I +V++ K+ L + + +A TPGF+GAD+AN+ NE
Sbjct: 314 PGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVK--ASVIARGTPGFSGADLANIVNE 371
Query: 545 AALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW-FLE 603
AAL AAR V+M FE A D+++ G E+++ V+S E++ AYHE+GHA+ G LE
Sbjct: 372 AALFAARENKKDVSMSEFERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLE 431
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--I 660
H +P+ KVTI+PRG A LG ++P ++ +TK +L GGR AE+++ G +
Sbjct: 432 H-DPVYKVTIIPRGRA-LGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLV 489
Query: 661 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTF-----EMSKPYSSKTGAII 714
+TGA ND+EK T++ V +G S K+G L++ + E + F K S T I
Sbjct: 490 TTGASNDIEKATEIARNMVTKWGLSQKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEI 549
Query: 715 DAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELT 773
D+EVR V AY Q +EEH E + +A+ L++ E + + + +L G+ P +
Sbjct: 550 DSEVRRIVDTAYTTAKQTLEEHIEQLHLMAKALIKYETIGEAQIKEILAGKEPSPPPDWK 609
Query: 774 NYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVA 809
+ +E + E G + +P P+ A
Sbjct: 610 EENGSASAHKENSEKELSEEKGE-EKTVNPSRPRPA 644
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 221/468 (47%), Positives = 306/468 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
N GK+ + +AK V F DVAG DEAK+E+ E V FLK P ++ +GAKIPKG LLV
Sbjct: 153 NFGKSKA-RFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLV 211
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP +IFID
Sbjct: 212 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID 271
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID NDERE TLNQLL EMDGF G+++IA TNRPD+LD AL+RP
Sbjct: 272 EIDAVGRQRGAGIGGG-NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRP 330
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+ +D PD GR +I +V+ + KL E S S +A TPGF+GAD+AN+ NEA
Sbjct: 331 GRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDS--IARRTPGFSGADLANLLNEA 388
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
A++ AR S +T+ + A+DRV+ G+E V SK +R +AYHE GHA+ G L+
Sbjct: 389 AILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSK-SKRLIAYHEVGHAIVGTLLKDH 447
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLG--KIST 662
+P+ KVT++PRG A G + PNE L TK QL +GGRAAE+ + G +++T
Sbjct: 448 DPVQKVTLIPRGQAQ-GLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTT 506
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTFE----MSKP-YSSKTGAIIDA 716
GA DL++VT+M V +G S+ +G +S + F M++ YS + IDA
Sbjct: 507 GAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDA 565
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
+VR+ + + ++++E +E V ++ +LL+EKE + ++ +++ E
Sbjct: 566 QVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAE 613
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 228/474 (48%), Positives = 305/474 (64%)
Query: 305 FNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALL 364
F KA + +DK + F +VAG DEAKQE+ E V FLK+ K++ LGA+IPKG LL
Sbjct: 141 FGRSKAKLFNMDKPT---ITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILL 197
Query: 365 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 424
+GPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF +A++ AP IIFI
Sbjct: 198 IGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFI 257
Query: 425 DEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLR 484
DEID +DERE TLNQ+LVEMDGF T V+VIA TNRPDILD ALLR
Sbjct: 258 DEIDAVGRQRGAGLGGG-HDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLR 316
Query: 485 PGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNE 544
PGRFDR++ +DKPDI GR+ I +++ K L + + LA T GF+GAD+AN+ NE
Sbjct: 317 PGRFDRRVVLDKPDITGREAILKIHAKGKPLADTVNL--ENLAKQTVGFSGADLANLLNE 374
Query: 545 AALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEH 604
AA++AAR V E E +IDRVI G E+K++ IS E+ AYHE+GH + ++
Sbjct: 375 AAILAARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQG 434
Query: 605 AEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTG 663
A+P+ K++IV RG LG + +PNE+ L+T+ Q M L G AE++ ++STG
Sbjct: 435 ADPVHKISIVARGMT-LGHTRQLPNEDRYLMTRSQFKAMMAGLLAGYVAEELTFKELSTG 493
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED-TF---EMS--KPYSSKTGAIIDAE 717
A +DL + T + + V YG SDK+G +F +E+ F E+S K Y K +ID E
Sbjct: 494 ASDDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEE 553
Query: 718 VREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRV-LGERPFKSS 770
VR + +A+ + ++ E+K + IAE L EKE L +L + +GE P S
Sbjct: 554 VRGLIEEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENLFVGEFPVSES 607
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 213/473 (45%), Positives = 310/473 (65%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
+ GK+ + ++ + K F DVAGCDEAK+E+ E V +L+ P +++ LG KIPKG L+V
Sbjct: 133 SFGKSKARMLTED-QIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMV 191
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP IIFID
Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID +DERE TLNQ+LVEMDGF G++VIA TNRPD+LD ALLRP
Sbjct: 252 EIDAVGRQRGAGLGGG-HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRP 310
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDRQ+ + PD++GR+QI +V+++++ L P + +A TPGF+GAD+AN+ NEA
Sbjct: 311 GRFDRQVVVGLPDVRGREQILKVHMRRVPL--APDIDAAIIARGTPGFSGADLANLVNEA 368
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
AL AARG V+M FE A D+++ G E+++ V+++ ++ + AYHE+GHA+ G +
Sbjct: 369 ALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEH 428
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLGK--IST 662
+P+ KVTI+PRG A LG ++P + + Q + TL GGR AE+++ G +ST
Sbjct: 429 DPVHKVTIIPRGRA-LGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVST 487
Query: 663 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRE-DTF-----EMSKPYSSKTGAIIDA 716
GA ND++ T + V +GFS+K+G L + + E + F +K S +T IID
Sbjct: 488 GASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQ 547
Query: 717 EVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQ---DDLLRVLGERP 766
EV+ + + Y R QL+ ++ + + + + L++ E + DDL+ RP
Sbjct: 548 EVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRP 600
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 225/509 (44%), Positives = 322/509 (63%)
Query: 308 GKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGP 367
GK+ K+ +V F DVAG DEAK+E+ E V FL+NP+K+ LG KIPKGALLVGP
Sbjct: 139 GKSKA-KMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGP 197
Query: 368 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEI 427
PGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FIDEI
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 428 DXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGR 487
D NDERE TLNQLLVEMDGF GV+++A TNR D+LD ALLRPGR
Sbjct: 258 DAVGRHRGAGYGGG-NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGR 316
Query: 488 FDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 547
FDR +T+ PDIKGR++I V+ +K L P + +A TPGF+GAD+AN+ NEAAL
Sbjct: 317 FDRNVTVGNPDIKGREKILGVHARKTPLG--PDVDLRIIARGTPGFSGADLANLVNEAAL 374
Query: 548 IAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 607
+AAR VTME FE A D+V+ G E+++ V+++ ++ AYHE+GHAV G L +P
Sbjct: 375 MAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDP 434
Query: 608 LLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGA 664
+ K TI+PRG ALG +P + L +++ MT+ G+AAE + G+ +S G
Sbjct: 435 VYKATIIPRG-GALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGP 493
Query: 665 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKP---YSSKTGAIIDAEVREW 721
D+++ +++ A V +G SDKVG + + + + + + S+ T +I+ EV+ +
Sbjct: 494 AGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRF 553
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELTNYDRFKQ 780
+ + Y + ++ E +E ++A+ LLE E L +++ RV+ GE P D Q
Sbjct: 554 IQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPPHAG------DDEDQ 607
Query: 781 GFEEEEKSS--APPETGTVDDGSSPLEPQ 807
G ++ +S A P+T + +EP+
Sbjct: 608 GTDQGNAASVTAIPKTKPKAPPAGGMEPE 636
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 225/509 (44%), Positives = 322/509 (63%)
Query: 308 GKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGP 367
GK+ K+ +V F DVAG DEAK+E+ E V FL+NP+K+ LG KIPKGALLVGP
Sbjct: 139 GKSKA-KMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGP 197
Query: 368 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEI 427
PGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FIDEI
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 428 DXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGR 487
D NDERE TLNQLLVEMDGF GV+++A TNR D+LD ALLRPGR
Sbjct: 258 DAVGRHRGAGYGGG-NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGR 316
Query: 488 FDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 547
FDR +T+ PDIKGR++I V+ +K L P + +A TPGF+GAD+AN+ NEAAL
Sbjct: 317 FDRNVTVGNPDIKGREKILGVHARKTPLG--PDVDLRIIARGTPGFSGADLANLVNEAAL 374
Query: 548 IAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 607
+AAR VTME FE A D+V+ G E+++ V+++ ++ AYHE+GHAV G L +P
Sbjct: 375 MAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDP 434
Query: 608 LLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGA 664
+ K TI+PRG ALG +P + L +++ MT+ G+AAE + G+ +S G
Sbjct: 435 VYKATIIPRG-GALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGP 493
Query: 665 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKP---YSSKTGAIIDAEVREW 721
D+++ +++ A V +G SDKVG + + + + + + S+ T +I+ EV+ +
Sbjct: 494 AGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRF 553
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELTNYDRFKQ 780
+ + Y + ++ E +E ++A+ LLE E L +++ RV+ GE P D Q
Sbjct: 554 IQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPPHAG------DDEDQ 607
Query: 781 GFEEEEKSS--APPETGTVDDGSSPLEPQ 807
G ++ +S A P+T + +EP+
Sbjct: 608 GTDQGNAASVTAIPKTKPKAPPAGGMEPE 636
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 218/449 (48%), Positives = 300/449 (66%)
Query: 318 NAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAK 377
+++ KV F DVAG +EAK+E++E V FLK+ +K+ LG KIPKG LL+G PGTGKTLLA+
Sbjct: 150 DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLAR 209
Query: 378 ATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXX 437
A AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP IIF+DEID
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 438 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKP 497
NDERE TLNQLLVEMDGF + GVV+IA TNRPD+LD ALLRPGRFDRQ+TI P
Sbjct: 270 LGGG-NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 498 DIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQV 557
DI GR++I V+ KK+ L P + +A TPGF+GAD+AN+ NEAALIAAR + V
Sbjct: 329 DINGREKIIAVHAKKVPL--APDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIV 386
Query: 558 TMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 617
TM FE A D+V+ G E+K+ V+ + ERR AYHE+GHAV + ++P+ K TI+PRG
Sbjct: 387 TMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRG 446
Query: 618 TAALGFAQYVPN-ENLLLTKEQLF-DMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTK 673
+ LG +P + + T+E++ D+T + +GGRAAE+++ G K+++GA +D+++ T
Sbjct: 447 RS-LGLVMRLPETDRVSHTREKMLADLT-VAMGGRAAEELIFGYNKVTSGASSDIKQATD 504
Query: 674 MTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLI 733
+ + V +G SD VG L D E + S+ +ID EV+ V A ++
Sbjct: 505 LAKSMVMKWGMSDSVGPL---YHSD--EAHERISTNLANLIDDEVKSIVSTALAEAKDVL 559
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
+H + + IA LLE E L DD+ ++
Sbjct: 560 TKHSDALHAIAANLLEFETLTGDDIADII 588
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 218/449 (48%), Positives = 300/449 (66%)
Query: 318 NAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAK 377
+++ KV F DVAG +EAK+E++E V FLK+ +K+ LG KIPKG LL+G PGTGKTLLA+
Sbjct: 150 DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLAR 209
Query: 378 ATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXX 437
A AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP IIF+DEID
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 438 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKP 497
NDERE TLNQLLVEMDGF + GVV+IA TNRPD+LD ALLRPGRFDRQ+TI P
Sbjct: 270 LGGG-NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 498 DIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQV 557
DI GR++I V+ KK+ L P + +A TPGF+GAD+AN+ NEAALIAAR + V
Sbjct: 329 DINGREKIIAVHAKKVPL--APDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIV 386
Query: 558 TMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 617
TM FE A D+V+ G E+K+ V+ + ERR AYHE+GHAV + ++P+ K TI+PRG
Sbjct: 387 TMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRG 446
Query: 618 TAALGFAQYVPN-ENLLLTKEQLF-DMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTK 673
+ LG +P + + T+E++ D+T + +GGRAAE+++ G K+++GA +D+++ T
Sbjct: 447 RS-LGLVMRLPETDRVSHTREKMLADLT-VAMGGRAAEELIFGYNKVTSGASSDIKQATD 504
Query: 674 MTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLI 733
+ + V +G SD VG L D E + S+ +ID EV+ V A ++
Sbjct: 505 LAKSMVMKWGMSDSVGPL---YHSD--EAHERISTNLANLIDDEVKSIVSTALAEAKDVL 559
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
+H + + IA LLE E L DD+ ++
Sbjct: 560 TKHSDALHAIAANLLEFETLTGDDIADII 588
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 210/451 (46%), Positives = 294/451 (65%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
V F DVAG DEAKQ+ ME V FLK P ++ +GAKIPKG LL+GPPGTGKTLLAKA AGE
Sbjct: 224 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP I+F+DEID
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGG- 342
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
NDERE TLNQLL EMDGF GV+V+A TNR DILD ALLRPGRFDRQ+++D PD+KGR
Sbjct: 343 NDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGR 402
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
I +V+ K D++ S + +A TPGF+GAD+AN+ NEAA++A R + ++ +
Sbjct: 403 TDILKVHAGNKKFDNDVSL--EIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEI 460
Query: 563 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 622
+ +IDR++ G+E K + VAYHE GHAV G + + KVT++PRG A G
Sbjct: 461 DDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQAR-G 518
Query: 623 FAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 679
++P+++ L++K+QLF LGGRAAE+++ G +++TGA DL+++T + V
Sbjct: 519 LTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMV 578
Query: 680 AVYGFSDKVG---LLSFPQREDTFE--MSK-PYSSKTGAIIDAEVREWVGKAYVRTVQLI 733
+G SD +G L+ + D M++ S K ID+ V++ AY + I
Sbjct: 579 TTFGMSD-IGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHI 637
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
+ ++E + ++ E+LLEKE + D+ +L E
Sbjct: 638 KNNREAMDKLVEVLLEKETIGGDEFRAILSE 668
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 966 (345.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 209/468 (44%), Positives = 290/468 (61%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
N K+ +AK KV F DVAG + K E+ E V +L++P+K++ +G K+PKG LLV
Sbjct: 155 NFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLV 214
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLA+A AGE+ V FLSIS S F+EMFVGVG RVR+LF A++ APSIIFID
Sbjct: 215 GPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFID 274
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
E+D +DERE TLNQLL EMDGF + V+V+A TNRPD+LD ALLRP
Sbjct: 275 ELDAVGRSRGAGLGGG-HDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRP 333
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDR + ID+PD + R++I V+ +KI LD + +A TPG AGAD+ N+ NEA
Sbjct: 334 GRFDRHVVIDRPDWRDREKILHVHTRKIPLDKDVDLAV--IARGTPGMAGADLENLVNEA 391
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
A++AAR + VTMEH E A D+V+ G E+K I++ E+R AYHE+GH + L
Sbjct: 392 AILAARENAATVTMEHMERAKDKVLMGGERK-MFITEQEKRITAYHEAGHTIVAKLLPGT 450
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENLL-LTKEQLFDMTCMTLGGRAAEQVLLGKISTGA 664
+P+ KVTI+PRG A LG Q +P ++ K L + + LGGR AE+ + G +STGA
Sbjct: 451 DPVHKVTIIPRGQA-LGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERAVFGDLSTGA 509
Query: 665 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED------TFEMSKPYSSKTGAIIDAEV 718
QNDL+ V + V +G SDK+G ++F + E+ K +S + +ID E+
Sbjct: 510 QNDLKMVNDLAEKMVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEI 569
Query: 719 REWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERP 766
+ +A + +I ++ + + + L+E+E L + VL P
Sbjct: 570 AAIIKEAEQKADNVIANNRGKLDALVDALMEEETLDGKRIDEVLASVP 617
Score = 37 (18.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 160 QQQISFQEFKNKLLEPGLVDHIVVSNKSVAKVFVRSSP 197
++ F K + +P L+ + N V V +SP
Sbjct: 82 RETAKFSTVKPAIDDPSLMADLQAKNVEVTAVTTETSP 119
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 213/467 (45%), Positives = 297/467 (63%)
Query: 307 IGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVG 366
IG++ K V F DVAG DEAKQ+ ME V FLK P ++ +GA+IPKG LLVG
Sbjct: 202 IGQSKA-KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260
Query: 367 PPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDE 426
PPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP I+F+DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 427 IDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPG 486
ID NDERE TLNQLL EMDGF GV+V+A TNR DILD ALLRPG
Sbjct: 321 IDAVGRQRGTGIGGG-NDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPG 379
Query: 487 RFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAA 546
RFDRQ+++D PD+KGR I +V+ K + S + +A TPGF+GAD+AN+ NEAA
Sbjct: 380 RFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSL--EVIAMRTPGFSGADLANLLNEAA 437
Query: 547 LIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAE 606
++A R + ++ + + +IDR++ G+E K + VAYHE GHA+ G +
Sbjct: 438 ILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHD 496
Query: 607 PLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTG 663
+ KVT++PRG A G ++P+++ L++K+QLF LGGRAAE+V+ G+ ++TG
Sbjct: 497 AVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTG 555
Query: 664 AQNDLEKVTKMTYAQVAVYGFSDKVG---LLSFPQREDTFE--MSK-PYSSKTGAIIDAE 717
A +DL+++T + V +G S+ +G L+ ++ D M++ S K ID
Sbjct: 556 AVSDLQQITGLAKQMVTTFGMSE-IGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTA 614
Query: 718 VREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 764
V+ KAY + I ++E + +I E+LLEKE + D+ +L E
Sbjct: 615 VKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSE 661
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 908 (324.7 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 205/465 (44%), Positives = 279/465 (60%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
+F I + +VD N V F DV GCDEAKQE+ E V FLK+P K+ +LG K+PKG L
Sbjct: 279 VFRIQLGNQVEVDPEEIN-VTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVL 337
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
LVGPPGTGKTLLA+A AGE+ VPF +G +F E+ VG G RVR+LF+ A+ AP +IF
Sbjct: 338 LVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIF 397
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDEID ++ T+NQLL EMDGF AGV+V+ TNR D LD+ALL
Sbjct: 398 IDEIDSVGAKRTNSVLHPYANQ---TINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALL 454
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCN 543
RPGRFD ++ + PD GR +I +YL KI L E LA T GF GAD+ N+ N
Sbjct: 455 RPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDL--DMLARGTSGFTGADLENMIN 511
Query: 544 EAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 603
+AAL AA V+M+H E A D+V+ G E+K ++ + AYHE GHA+ ++ +
Sbjct: 512 QAALRAAIDGAETVSMKHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTK 571
Query: 604 HAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KI 660
+ PL KVTI+PRG + LG Y+P E +TK QL M +GGRAAE+++ G KI
Sbjct: 572 ESHPLHKVTIMPRGPS-LGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKI 630
Query: 661 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVRE 720
++GA +DL++ T + V +G SDKVGL + + T +DAE++
Sbjct: 631 TSGASSDLKQATSIATHMVRDWGMSDKVGLRTI-EASKGLGTGDTLGPNTIEAVDAEIKR 689
Query: 721 WVGKAYVRTVQLIEEH-KEHVAQIAELLLEKEVLHQDDLLRVLGE 764
+ +Y R ++ +H +EH A +AE LL+ E L DD+ +L E
Sbjct: 690 ILSDSYERAKAILRKHTREHKA-LAEALLKYETLDADDIKAILNE 733
Score = 42 (19.8 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 121 NTDDHGNFQDTFMKQFQNLITPLLVIALFLSSFSLS 156
N++D T MK + ++ ++ + +FLS F+ S
Sbjct: 241 NSEDSPKSGKT-MKYLKTIVVIVVFLGIFLSFFTTS 275
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 196/481 (40%), Positives = 294/481 (61%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKT 373
KV + K + F ++AG DE+K E++E V F+KN KY ++GA++PKG LLVGPPG+GKT
Sbjct: 138 KVSPHFK-PIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 374 LLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXX 433
+LA+A A E+ VP++ SG +F+E++VG G R+R LF AR APSI+FIDEID
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 434 XXXXXXXXXND-ERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
E + TLNQLLVEMDGF T ++VI TNR D LD ALLRPGRFDR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
+ PDI GR +I ++Y+KKIK D + +++A LTPGF+GAD+ NV NEA ++A R
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRN 375
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE-HAEPLLKV 611
S VT+ A D+V G E+K+ S +RR AYHE+GHA+ +FL+ +P+ K
Sbjct: 376 NKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKA 435
Query: 612 TIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDL 668
TI+ RG A LG+ + +P ++ K Q+ + +GGR AE+++ GK S+GA +D+
Sbjct: 436 TIISRGNA-LGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDI 494
Query: 669 EKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVR 728
+ T++ Y V +G SDK+G L++ +R S S++T + I+ EV+ V K
Sbjct: 495 SRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSL 554
Query: 729 TVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKS 788
+ +++ H++ + +A LL+KE L +++ ++ K+ + K ++ EK
Sbjct: 555 SEEILRRHRKELDNLAFALLDKETLSGEEIKNIIDPNNSKNYS-GKVEMLKNDTKKNEKK 613
Query: 789 S 789
S
Sbjct: 614 S 614
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 196/481 (40%), Positives = 294/481 (61%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKT 373
KV + K + F ++AG DE+K E++E V F+KN KY ++GA++PKG LLVGPPG+GKT
Sbjct: 138 KVSPHFK-PIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 374 LLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXX 433
+LA+A A E+ VP++ SG +F+E++VG G R+R LF AR APSI+FIDEID
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 434 XXXXXXXXXND-ERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
E + TLNQLLVEMDGF T ++VI TNR D LD ALLRPGRFDR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
+ PDI GR +I ++Y+KKIK D + +++A LTPGF+GAD+ NV NEA ++A R
Sbjct: 317 YVPLPDINGRKKILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRN 375
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE-HAEPLLKV 611
S VT+ A D+V G E+K+ S +RR AYHE+GHA+ +FL+ +P+ K
Sbjct: 376 NKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKA 435
Query: 612 TIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDL 668
TI+ RG A LG+ + +P ++ K Q+ + +GGR AE+++ GK S+GA +D+
Sbjct: 436 TIISRGNA-LGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDI 494
Query: 669 EKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVR 728
+ T++ Y V +G SDK+G L++ +R S S++T + I+ EV+ V K
Sbjct: 495 SRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSL 554
Query: 729 TVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKS 788
+ +++ H++ + +A LL+KE L +++ ++ K+ + K ++ EK
Sbjct: 555 SEEILRRHRKELDNLAFALLDKETLSGEEIKNIIDPNNSKNYS-GKVEMLKNDTKKNEKK 613
Query: 789 S 789
S
Sbjct: 614 S 614
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 193/452 (42%), Positives = 284/452 (62%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKT 373
+V + + F DV G DEAK E+ E VH+L++P+++ LG K+PKG LLVGPPGTGKT
Sbjct: 215 EVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKT 274
Query: 374 LLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXX 433
+LA+A AGE+GVPF S SGS+F EMFVGVG RVR+LF A++C+P IIFIDEID
Sbjct: 275 MLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGS 334
Query: 434 XXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
+ TLNQ+LVE+DGF G++V+A TN P+ LDKAL+RPGRFDR I
Sbjct: 335 RNPKD----QQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIV 390
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
+ PD++GR QI + ++ K+ + +A TPGF+GAD+AN+ N AAL AA
Sbjct: 391 VPNPDVEGRRQILESHMSKVLKAEDVDLMI--IARGTPGFSGADLANLVNVAALKAAMDG 448
Query: 554 NSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTI 613
+ VTM E A DR++ G E+K+ VIS R+ A+HE GHA+ E A P+ K TI
Sbjct: 449 SKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATI 508
Query: 614 VPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEK 670
VPRG A LG +P+++ ++++Q+ + +GGR AE+++ G+ +++GA +DLE+
Sbjct: 509 VPRGMA-LGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQ 567
Query: 671 VTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTV 730
TK+ A V +G S +VGL++ +D K S++T +I++EV++ + KAY
Sbjct: 568 ATKLARAMVTKFGMSKEVGLVAH-NYDDN---GKSMSTETRLLIESEVKQLLEKAYNNAK 623
Query: 731 QLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
++ + + + +A LL+ E L + +L
Sbjct: 624 TILTVYNKELHALANALLQHETLSGKQIKELL 655
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 199/446 (44%), Positives = 278/446 (62%)
Query: 320 KNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKAT 379
KN F+DV GCD+AKQE+ E V +LKNP K+ LG K+PKG LL G PGTGKTLLAKA
Sbjct: 356 KNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 415
Query: 380 AGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXX 439
AGE+GVPF +GS+F EMFVGVG RVR+LFQ A++ AP IIFIDEID
Sbjct: 416 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW-- 473
Query: 440 XXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDI 499
+ TL+QLLVEMDGF G++V+A TN PDILD AL RPGRFDR I + PD+
Sbjct: 474 ---EGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDV 530
Query: 500 KGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTM 559
+GR++I ++YL+ + + + +A TPGF GAD+AN+ N AA+ AA +++
Sbjct: 531 RGREEILELYLQGKPMSEDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSS 588
Query: 560 EHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTA 619
E E A DR++ G E+K +S+ ++ AYHESGHA+ + A P+ K TI+PRG+A
Sbjct: 589 EQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSA 648
Query: 620 ALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTY 676
LG +P N+ ++K QL + +GGR AE+++ G I+TGA +DL + T++
Sbjct: 649 -LGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQ 707
Query: 677 AQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEH 736
V+ G S+ +G + +R P SS + IDAEV + + +AY R L++ H
Sbjct: 708 YMVSSCGMSEAIGPVHIKER--------P-SSDMQSRIDAEVVKLLREAYERVKSLLKRH 758
Query: 737 KEHVAQIAELLLEKEVLHQDDLLRVL 762
++ + +A LLE E L +D+ R+L
Sbjct: 759 EKQLHTLANALLEYETLTAEDIKRIL 784
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 203/453 (44%), Positives = 275/453 (60%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
+V F DV G DEAK E+ E V +LK+P KY LG ++PKG LLVGPPGTGKTLLA+A AG
Sbjct: 244 QVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAG 303
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ VPF +GS+F E+ VG G RVR+LF +A+ AP IIFIDEID
Sbjct: 304 EAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHP 363
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
++ T+NQLL EMDGF G++VIA TNR D LDKALLRPGRFD ++T+ KPD+ G
Sbjct: 364 YANQ---TINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAG 420
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R IF YL KI H + LA + GF GADI N+ N+AAL AA +VTM +
Sbjct: 421 RVDIFNFYLSKIV--HSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAY 478
Query: 562 FEAAIDRVIGGLEKKNKVISKLE-RRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 620
+ A DRV+ G + I E R AYHE+GH + + + A PL KVTI+PRG +
Sbjct: 479 LDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQS- 537
Query: 621 LGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYA 677
LG +P ++ LTK Q+ + +GGR AE+++ G K++TGA +DL K T++
Sbjct: 538 LGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQ 597
Query: 678 QVAVYGFSDKVGLLSFPQREDTFEMSK--PYSSKTGAIIDAEVREWVGKAYVRTVQLIEE 735
V V+G SDKVGL F +++ + K + +T +IDAE+ + ++Y R ++E
Sbjct: 598 MVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILET 657
Query: 736 HKEHVAQIAELLLEKEVLHQDDLLRVLGERPFK 768
K+ +AE LLE E L D++ RV+ + K
Sbjct: 658 KKKEHQLLAEALLEYETLSADEVKRVISGQKIK 690
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 199/459 (43%), Positives = 283/459 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAK E+ E V FL+NP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 277 VDPVQMKNVTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTL 336
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 337 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKR 396
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 397 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 453
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YLKKIK+D + ++ +A T GF+GA++ N+ N+AAL AA
Sbjct: 454 PRPDVKGRTEILKWYLKKIKVDS--AVEAEVIARGTVGFSGAELENLVNQAALKAAVDGK 511
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E A D+++ G E+++ I K + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 512 DMVTMKELEFAKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIM 571
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 572 PRGPT-LGHVSMLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSA 630
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ +++K S +T A I+ EVR + +Y R
Sbjct: 631 TKIAKMMVTRFGMSEKLGVMTYS------DLTKQ-SPETQAAIEHEVRILLRDSYERAKA 683
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVLGERPFKS 769
L++ KEH +AE LL E L ++ VL + S
Sbjct: 684 LLKSRAKEH-RNLAEALLRYETLDAKEIQLVLEGKALNS 721
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 198/478 (41%), Positives = 298/478 (62%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGAL 363
IF + VD + ++ V F+DV GCDEA+ E+ E V FLK+P K+ LG K+PKG L
Sbjct: 204 IFRNSETSDKSVDVS-QSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVL 262
Query: 364 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 423
L GPPGTGKTLLA+ATAGE+GVPF +SGS+F E++VGVG R+R LF +AR AP+IIF
Sbjct: 263 LTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIF 322
Query: 424 IDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALL 483
IDE+D + TLNQLLVE+DGF T G+++I TN P+ LDKAL
Sbjct: 323 IDELDAIGGKRNPKDQAYA----KQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALT 378
Query: 484 RPGRFDRQITIDKPDIKGRDQIFQVYLKKIKL--DHEPSYYSQRLAALTPGFAGADIANV 541
RPGRFD+++ +D PD++GR I + +++ ++ D +PS +A TPG +GA++ N+
Sbjct: 379 RPGRFDKEVIVDLPDVRGRIDILKHHMQNVETADDVDPSI----IARGTPGLSGAELMNL 434
Query: 542 CNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWF 601
N+AA+ A++ V M HFE A D+++ G KK VI++ R AYHE+GHA+ F
Sbjct: 435 VNQAAVHASQLSAPAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMF 494
Query: 602 LEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK- 659
+ A PL K TI+PRG A LG +P + + ++K++ F + +GG+ AE+++ GK
Sbjct: 495 SKGATPLYKATILPRGRA-LGITFQLPEMDKVDMSKQECFARLDVCMGGKIAEEMINGKE 553
Query: 660 -ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQR-EDTFEMSKPYSSKTGAIIDAE 717
+++G +DL T + A V YG SDK+G P R D +E +S + + D E
Sbjct: 554 NVTSGCASDLSNATSVARAMVTSYGMSDKIG----PVRLSDDWES---WSPQIRNMADNE 606
Query: 718 VREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPF-KSSELTN 774
VR+++ + RT +L+ + + + ++AE LLE E L ++++ +V+ P K+ ++N
Sbjct: 607 VRDYLLDSEKRTRKLLYDKRLELKRLAEGLLEYETLTKEEMEKVVKGEPINKAKTMSN 664
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 198/452 (43%), Positives = 281/452 (62%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 389
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 390 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 446
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 447 PRPDVKGRTEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 565 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 623
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + ++Y R
Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRESYERAKH 676
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 677 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 198/452 (43%), Positives = 281/452 (62%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 389
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 390 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 446
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 447 PRPDVKGRTEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 565 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 623
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + ++Y R
Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRESYERAKH 676
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 677 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 198/452 (43%), Positives = 280/452 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 304 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 363
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 364 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 423
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 424 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 480
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 481 PRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 538
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 539 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 598
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 599 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 657
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + +Y R
Sbjct: 658 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRDSYERAKH 710
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 711 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 741
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 198/452 (43%), Positives = 280/452 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 328 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTL 387
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 388 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 447
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 448 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 504
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 505 PRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 562
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 563 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 622
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 623 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 681
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + +Y R
Sbjct: 682 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRDSYERAKH 734
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 735 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 765
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 198/452 (43%), Positives = 280/452 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 323 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 382
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 383 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 442
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 443 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 499
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 500 PRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 557
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 558 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 617
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 618 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 676
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + +Y R
Sbjct: 677 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRDSYERAKH 729
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 730 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 760
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 200/452 (44%), Positives = 281/452 (62%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 267 VDPIQLKNVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTL 326
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP +IFIDE+D
Sbjct: 327 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR 386
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GVV+I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 387 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTV 443
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
KPD++GR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 444 PKPDVRGRTEILKWYLNKIKYDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 501
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 502 DMVTMKELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIM 561
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
RGT LG +P N+ T+ QL + +GGRAAE+++ G I+TGA +D +
Sbjct: 562 TRGTT-LGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNA 620
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ EVR + +Y R
Sbjct: 621 TKIAKLMVTRFGMSEKLGVMTYT---DTGKVS-P---ETQSAIEQEVRTLLRDSYERAKN 673
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL+ E L ++ VL
Sbjct: 674 ILKTHAKEH-KNLAEALLKYETLDAKEIQIVL 704
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 200/452 (44%), Positives = 281/452 (62%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 272 VDPIQLKNVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTL 331
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP +IFIDE+D
Sbjct: 332 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR 391
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GVV+I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 392 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTV 448
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
KPD++GR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 449 PKPDVRGRTEILKWYLNKIKYDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 506
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 507 DMVTMKELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIM 566
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
RGT LG +P N+ T+ QL + +GGRAAE+++ G I+TGA +D +
Sbjct: 567 TRGTT-LGHVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNA 625
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ EVR + +Y R
Sbjct: 626 TKIAKLMVTRFGMSEKLGVMTYT---DTGKVS-P---ETQSAIEQEVRTLLRDSYERAKN 678
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL+ E L ++ VL
Sbjct: 679 ILKTHAKEH-KNLAEALLKYETLDAKEIQIVL 709
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 186/464 (40%), Positives = 288/464 (62%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
NI H + + V F DV GCDEAK E+ E V FL NP ++ LG K+PKG LLV
Sbjct: 296 NIKGPHSNEAQPEHQT-VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLV 354
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLA+A AGE+GVPF +SGS+F E++VGVG RVR LF +AR +P+IIFID
Sbjct: 355 GPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFID 414
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
E+D + TLNQLL E+DGF + GV+++A TN P++LDKAL RP
Sbjct: 415 ELDAIGAKRNERDAAYV----KQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRP 470
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDR++ +D PD++GR I + ++K +++ + +A T GF+GAD+ N+ N+A
Sbjct: 471 GRFDRKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAV--IARGTSGFSGADLENLVNQA 528
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
A+ A+R + S+VT + F+ A D++I G E ++++I ++ AYHE+GHA+ +F +
Sbjct: 529 AIFASRNKQSKVTPKDFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSS 588
Query: 606 EPLLKVTIVPRGTAALGFAQYVPNENLLLTK--EQLFDMTCMTLGGRAAEQVLLG--KIS 661
PL K+TI+PRG + LG ++P +++ + L D+ +++GG+ AE+++ G K++
Sbjct: 589 MPLYKITIMPRGMS-LGSTHFLPEMDMVSKNYVQYLSDID-VSMGGKVAEELIYGEDKVT 646
Query: 662 TGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREW 721
+G DL T+ + V +G+S K+G + D+ SS+T I+AEVR
Sbjct: 647 SGISADLASATRTAFTLVTRFGYSKKLGNVDLYANYDSL------SSETKQEIEAEVRRL 700
Query: 722 VGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GE 764
V +A R ++ E + + + + L++ E L ++++ +VL GE
Sbjct: 701 VEEARQRATNILTERRHELELLTKALIKYETLTKEEMEKVLRGE 744
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 198/454 (43%), Positives = 280/454 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 389
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 390 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 446
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 447 PRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTG--AQNDLE 669
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TG A +D +
Sbjct: 565 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFD 623
Query: 670 KVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRT 729
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + +Y R
Sbjct: 624 NATKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRDSYERA 676
Query: 730 VQLIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 677 KHILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 709
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 204/472 (43%), Positives = 283/472 (59%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
+ F DVAG DEAK+E+ E V FLKNP +Y LGA+ P+G LLVG PGTGKTLLAKA AGE
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
S VPF+S S S+F+E++VG+G SRVR+LF A++ APSIIFIDEID
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVS 445
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
NDERE TLNQLL EMDGF +++ V+V+ TNR D+LD AL RPGRFDR +T++ PD GR
Sbjct: 446 NDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGR 505
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
+ I +V++ K +L +A++T GF GAD+AN+ NEAAL+A R V F
Sbjct: 506 ESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDF 565
Query: 563 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW----FLEHAEPLLKVTIVPRGT 618
A++R I G+EKK + E+ VA HE+GHAV G L + K++I+PR
Sbjct: 566 IHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSG 625
Query: 619 AALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKM 674
ALGF Y+P + LL ++L LGGRAAE+V+ G+ISTGA +D+ + T M
Sbjct: 626 GALGFT-YIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDM 684
Query: 675 TYAQVAVYGFSDKVGLLSFPQRE-DTFEMS--KPYSSKTGAIIDA---EVREWVGKAYVR 728
Y VA YG ++K+G +S + S P+ G ++D EV + A
Sbjct: 685 AYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGHLVDLVQREVTNLLQSALDV 744
Query: 729 TVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQ 780
+ ++ + + + + L ++E + ++L + L R S EL + + KQ
Sbjct: 745 ALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWLN-RVVPSEELAVFIKGKQ 795
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 196/452 (43%), Positives = 279/452 (61%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 389
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+ QLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 390 IEFPMHPYSRQ---TIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 446
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 447 PRPDVKGRTEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ + QL +++GGR AE+++ G I+TGA +D +
Sbjct: 565 PRGPT-LGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 623
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQ 731
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R + ++Y R
Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIRILLRESYERAKH 676
Query: 732 LIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
+++ H KEH +AE LL E L ++ VL
Sbjct: 677 ILKTHAKEH-KNLAEALLTYETLDAKEIQIVL 707
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 190/454 (41%), Positives = 286/454 (62%)
Query: 313 TKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGK 372
+ VD + F V G +EAK E+ + V FL+NP+K+ LG K+PKG LLVGPPGTGK
Sbjct: 282 SSVDPVQMKNITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGK 341
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 342 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGG 401
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
+ + T+NQLL EMDGF GV+VI TN + LD AL+RPGRFD Q+
Sbjct: 402 KRIESPMHPYSRQ---TINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQV 458
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
T+ PD+KGR +I + YLKKIK+D + ++ +A T GF+GA++ N+ N+AAL AA
Sbjct: 459 TVPIPDVKGRTEILEWYLKKIKVDS--AIDAEIIARGTVGFSGAELENLVNQAALKAAAD 516
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVT 612
VTM+ + A D+++ G E+++ I K + AYHESGHA+ ++ + A P+ K T
Sbjct: 517 GKDLVTMKELKFAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKAT 576
Query: 613 IVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLE 669
I+PRG + LG +P N+ T+ QL +++GGR AE+++ G +I++GA +D +
Sbjct: 577 IMPRGPS-LGHVSLLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFD 635
Query: 670 KVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRT 729
TK+ V +G SDK+G++++ +++K +S +T A ++ E+R + +Y R
Sbjct: 636 GATKIAQMMVTRFGMSDKLGVMTYS------DLTK-HSPETRAAVEQEIRVLLQSSYERA 688
Query: 730 VQLIEEH-KEHVAQIAELLLEKEVLHQDDLLRVL 762
++++ + KEH +A+ LL E L+ ++ +L
Sbjct: 689 KKILKTYSKEHKL-LADALLTYETLNAKEIQMIL 721
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 196/462 (42%), Positives = 284/462 (61%)
Query: 319 AKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKA 378
AK V F DV GCDEA+ E+ E V FLK+P KYE LG K+PKG LL GPPGTGKTLLA+A
Sbjct: 274 AKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARA 333
Query: 379 TAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXX 438
TAGE+GV F +SGS+F E++VGVG R+R+LF +AR AP+IIFIDE+D
Sbjct: 334 TAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKD 393
Query: 439 XXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPD 498
+ TLNQLLVE+DGF T+G+++I TN P+ LDKAL RPGRFD+ + +D PD
Sbjct: 394 QAYA----KQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPD 449
Query: 499 IKGRDQIFQVYLKKIKL-DH-EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQ 556
++GR I + ++KKI L D+ +P+ +A TPG +GA++AN+ N+AA+ A +
Sbjct: 450 VRGRADILKHHMKKITLADNVDPTI----IARGTPGLSGAELANLVNQAAVYACQKNAVS 505
Query: 557 VTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPR 616
V M HFE A D+++ G E+K V++ R+ A+HE+GHA+ + A PL K TI+PR
Sbjct: 506 VDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPR 565
Query: 617 GTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGKIST--GAQNDLEKVTK 673
G A LG +P + + +TK + + +GG+ AE+++ GK +T G +DL+ T
Sbjct: 566 GRA-LGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATG 624
Query: 674 MTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLI 733
A V YG SD VG ++ + ++ +S+K I D EV E + + R +L+
Sbjct: 625 TARAMVTQYGMSDDVGPVNLSENWES------WSNKIRDIADNEVIELLKDSEERARRLL 678
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELTN 774
+ + ++A+ L+E E L ++ +V GE+ K TN
Sbjct: 679 TKKNVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTSTN 720
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 199/454 (43%), Positives = 278/454 (61%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
+ F DVAG DEAK+E+ E V FL+NP KY LGA+ P+G LLVG PGTGKTLLAKA AGE
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
+ VPF+S S S+F+E++VG+G SRVR+LF A++ APSIIFIDEID
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGS 441
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
NDERE TLNQLL EMDGF + + V+V+ TNR D+LD AL RPGRFDR +T++ PD GR
Sbjct: 442 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGR 501
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
+ I +V++ K +L +A++T GF GAD+AN+ NEAAL+A R + V F
Sbjct: 502 ESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDF 561
Query: 563 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEH---AEPLL-KVTIVPRGT 618
A++R I G+EKK+ + E+ VA HE+GHAV G + + +P + K++I+PR
Sbjct: 562 IQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTG 621
Query: 619 AALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKM 674
ALGF Y+P + LL ++L LGGRAAE+V+ G+ISTGA +D+ + T M
Sbjct: 622 GALGFT-YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDM 680
Query: 675 TYAQVAVYGFSDKVGLLSFPQREDT-FEMS--KPYSSKTGAIIDA---EVREWVGKAYVR 728
Y VA YG + K+G +S + S P+ G ++D EV + A
Sbjct: 681 AYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDV 740
Query: 729 TVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
+ ++ + + + + L EKE + ++L + L
Sbjct: 741 ALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWL 774
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 184/408 (45%), Positives = 258/408 (63%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
VD V F V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL
Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP +IFIDE+D
Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR 389
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ + T+NQLL EMDGF GV++I TN P+ LD AL+RPGRFD Q+T+
Sbjct: 390 IESPMHPYSRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV 446
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
+PD+KGR +I + YL KIK D S + +A T GF+GA++ N+ N+AAL AA
Sbjct: 447 PRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 555 SQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 614
VTM+ E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIM 564
Query: 615 PRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKV 671
PRG LG +P N+ T+ QL +++GGR AE+++ G I+TGA +D +
Sbjct: 565 PRGPT-LGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNA 623
Query: 672 TKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVR 719
TK+ V +G S+K+G++++ DT ++S P +T + I+ E+R
Sbjct: 624 TKIAKRMVTKFGMSEKLGVMTY---SDTGKLS-P---ETQSAIEQEIR 664
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 188/467 (40%), Positives = 282/467 (60%)
Query: 315 VDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
+++ A N V F DV G DEAK+E+ E V FL++P + LG K+P+G LL GPPGTGKT+
Sbjct: 257 MEERAIN-VRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTM 315
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
LA+A AGE+ VPF +SGS F EM+VGVG RVR LF AR+ APSIIFIDE+D
Sbjct: 316 LARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKR 375
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAG----VVVIAGTNRPDILDKALLRPGRFDR 490
TLNQLLV++DGF VV I TN P+ LD AL RPGRFDR
Sbjct: 376 NARDAA----HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDR 431
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
I + PD++GR I + + + L + +A T GFAGAD+AN+ N+AA+ A+
Sbjct: 432 HIHVPLPDVRGRLAILLQHTRHVPLGKDVDL--SIIARGTSGFAGADLANLINQAAVYAS 489
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLK 610
+ ++ V+M E + DR++ G E+K+ I+ + AYHE GHA+ F ++A K
Sbjct: 490 KNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYK 549
Query: 611 VTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQND 667
TI+PRG++ LG +P+ + T+E+ M +T+GGRAAE++L GK I++GA ND
Sbjct: 550 ATIMPRGSS-LGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHND 608
Query: 668 LEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYV 727
++K T++ V +G SD++G +S D S T A++++E++ + +Y
Sbjct: 609 IDKATQVARRMVTEFGMSDRIGPVSLEAEMDNL------SPATRALVESEIKSLLEASYE 662
Query: 728 RTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELT 773
R++ L++ HK+ + +A L++ E L +++ RV+ G+R ++L+
Sbjct: 663 RSLSLLKSHKKELDALATALVDYEFLTAEEMNRVVKGDRDLLRNKLS 709
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 180/453 (39%), Positives = 272/453 (60%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLL 375
D+ + F DV G E K+E+ E V +L +P KY +GAK+PKG LL G PGTGKTLL
Sbjct: 290 DETNQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLL 349
Query: 376 AKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXX 435
A+A AGE+GV FL +GS F E +VGVG RVR LF AR+ P IIFIDEID
Sbjct: 350 ARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRN 409
Query: 436 XXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITID 495
TL QLL EMDGF + +++I TN P+ LD ALLRPGRFDR I++
Sbjct: 410 TA-------HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVP 462
Query: 496 KPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENS 555
PD+KGR +I YLKK+K H + +A TPGF GAD++N+ N AA+ A +
Sbjct: 463 IPDMKGRSEIIDHYLKKVK--HTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKE 520
Query: 556 QVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVP 615
++++ + A D ++ G + N V+S+ RR AYHE+GHA+ E A+P+ K TIV
Sbjct: 521 TISIKQIDDARDDILMGRARLNAVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQ 580
Query: 616 RGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVT 672
RG A LG +P +++ T++Q+ + L GRAAE++ G +++GA +D ++ +
Sbjct: 581 RGQA-LGMVSQLPEMDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQAS 639
Query: 673 KMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQL 732
+ ++ + +G SDKVG + + + + + E+ K II+ EV++ + K Y + +L
Sbjct: 640 SLAFSMITKWGMSDKVGFI-YHKDKTSPEVQK--------IIEDEVKDLLDKQYQYSKEL 690
Query: 733 IEEHKEHVAQIAELLLEKEVLHQDDLLRVLGER 765
I ++++++ ++ LLEKE L +++L++L +
Sbjct: 691 IIKNRDNMEKLVGQLLEKETLTGEEILKILNPK 723
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 194/466 (41%), Positives = 275/466 (59%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESG 384
F DV G +EAK E+ + V FL+NP KY +PKG LLVGPPGTGKTLLAK+ AGE+
Sbjct: 163 FADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEAR 222
Query: 385 VPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXND 444
V F++I+GS+F E FVGVG RVR LF+ AR+ +P I+FIDEID N
Sbjct: 223 VSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRV----NY 278
Query: 445 ERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 504
LNQLLVE+DGF GV+V+A TN D LD AL+R GRFDR I + PD K R
Sbjct: 279 HPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKS 338
Query: 505 IFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEA 564
I YLK + + + +A TPGF+GAD+ N+ N AAL + ++TME E
Sbjct: 339 IIDHYLKDKPIASHVN--TTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQLEN 396
Query: 565 AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFA 624
A + ++ G E+ + ++S R+ A+HE+GHA+ A + K TI+PRG A LG
Sbjct: 397 AKENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDA-LGLV 455
Query: 625 QYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVY 682
+ E +TK+QL + +GGRAAE+++LGK IS GA +D++K T + A V+ Y
Sbjct: 456 SMLEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSNY 515
Query: 683 GFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEH-KEHVA 741
G S+KVG + + Q E K SS ++D+EV+ + +Y+R QL++++ KEH
Sbjct: 516 GMSEKVGQI-YIQSE------KKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEHHL 568
Query: 742 QIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEK 787
IA LLE E L D++ ++ + + + N ++ + EE +K
Sbjct: 569 -IANALLEYETLSLDEIKDIIASKSLANKK--NREQLIKEREELKK 611
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 183/445 (41%), Positives = 261/445 (58%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
KV F DV GCDE KQE+ E + +LKN K+ +GAK+PKG LL G PGTGKTL+A+A AG
Sbjct: 250 KVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAG 309
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ VPFL SGS+F EMFVGVG R+R LFQ A++ AP I+FIDEID
Sbjct: 310 EANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD--- 366
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
N TLNQLLVE+DGF G+VVI TN P LDKAL+RPGR D+ I + PDIKG
Sbjct: 367 -NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL-IAARGENSQVTME 560
R +I ++Y KI L + + L+ T G GAD+ N+ N AA+ + G+ S V M
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHV--LSRRTVGMTGADLNNILNIAAIKCSVEGKKS-VDMN 482
Query: 561 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 620
E A DRV+ GL++K+ +++ E+ AYHE GH + ++ + ++P+ K TI+PRG +
Sbjct: 483 SIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMS- 540
Query: 621 LGFAQYVPNENLLLTK-EQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYA 677
LG +P + K + + + +GG +E+++ GK ++TG +DL+K T + +
Sbjct: 541 LGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQS 600
Query: 678 QVAVYGFSDKVGLLSFPQREDTFEM---SKPYSSKTGAI-IDAEVREWVGKAYVRTVQLI 733
V YG VG+ ED M K S+ I ID ++ + +Y R ++
Sbjct: 601 LVMNYG----VGI-----NEDNISMFLHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVL 651
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDL 758
+H + + +IA L+E E L D++
Sbjct: 652 NQHIDELHRIASALVEYETLTSDEI 676
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 183/445 (41%), Positives = 261/445 (58%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
KV F DV GCDE KQE+ E + +LKN K+ +GAK+PKG LL G PGTGKTL+A+A AG
Sbjct: 250 KVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAG 309
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ VPFL SGS+F EMFVGVG R+R LFQ A++ AP I+FIDEID
Sbjct: 310 EANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD--- 366
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
N TLNQLLVE+DGF G+VVI TN P LDKAL+RPGR D+ I + PDIKG
Sbjct: 367 -NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL-IAARGENSQVTME 560
R +I ++Y KI L + + L+ T G GAD+ N+ N AA+ + G+ S V M
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHV--LSRRTVGMTGADLNNILNIAAIKCSVEGKKS-VDMN 482
Query: 561 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 620
E A DRV+ GL++K+ +++ E+ AYHE GH + ++ + ++P+ K TI+PRG +
Sbjct: 483 SIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMS- 540
Query: 621 LGFAQYVPNENLLLTK-EQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYA 677
LG +P + K + + + +GG +E+++ GK ++TG +DL+K T + +
Sbjct: 541 LGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQS 600
Query: 678 QVAVYGFSDKVGLLSFPQREDTFEM---SKPYSSKTGAI-IDAEVREWVGKAYVRTVQLI 733
V YG VG+ ED M K S+ I ID ++ + +Y R ++
Sbjct: 601 LVMNYG----VGI-----NEDNISMFLHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVL 651
Query: 734 EEHKEHVAQIAELLLEKEVLHQDDL 758
+H + + +IA L+E E L D++
Sbjct: 652 NQHIDELHRIASALVEYETLTSDEI 676
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 632 (227.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 134/309 (43%), Positives = 197/309 (63%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
N+ +H+ V N + F DVAG DE K E+ E V FL+NP+KY++ G K+PKG L+V
Sbjct: 136 NLESSHIKPVISN----ITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMV 191
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPG GKTL+AKA AGE+GVPF SGS F+E++VG+G RVR LF +A+ APSI+FID
Sbjct: 192 GPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFID 251
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRP 485
EID N ER+STLNQLL +MDGF +GV+VIA TN+ +++D ALLR
Sbjct: 252 EIDAVGKARGEMS----NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRS 307
Query: 486 GRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 545
GRFDR+I + PD K R +I ++Y+K D + ++A + GF+GA + + NEA
Sbjct: 308 GRFDRRIFLSLPDFKDRLKILEIYMK----DKNNNINLNKIAKASVGFSGAGLETLVNEA 363
Query: 546 ALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 605
A+ A R ++ V F A +++V+ G +KK + E++ A +++ A++ ++L+
Sbjct: 364 AINALRRNSALVEESDFYAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG 422
Query: 606 EPLLKVTIV 614
K+T++
Sbjct: 423 --FEKITLI 429
Score = 309 (113.8 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 76/232 (32%), Positives = 135/232 (58%)
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
N ER+STLNQLL +MDGF +GV+VIA TN+ +++D ALLR GRFDR+I + PD K R
Sbjct: 265 NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
+I ++Y+K D + ++A + GF+GA + + NEAA+ A R ++ V F
Sbjct: 325 LKILEIYMK----DKNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDF 380
Query: 563 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 622
A +++V+ G +KK + E++ A +++ A++ ++L+ K+T++
Sbjct: 381 YAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG--FEKITLIEDR----- 432
Query: 623 FAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKM 674
F +Y E+ + +K +L + + L G A +++ + T +Q+D K+ ++
Sbjct: 433 FKEY---EHNIRSKSELINRIKVYLAGSRAMKLIYNESYTNSQDDFLKIKEL 481
Score = 59 (25.8 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 731 QLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 762
+ + K+ + +++ELLLEKE + DD+ ++
Sbjct: 505 EFLNSMKDKILKLSELLLEKEKIEYDDVKDIM 536
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 632 (227.5 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 152/377 (40%), Positives = 217/377 (57%)
Query: 305 FNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALL 364
F+ KA +VD V F DVAG DEA E+ E V +LKNP ++ +G K P G LL
Sbjct: 412 FSQSKAEA-RVD--GSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLL 468
Query: 365 VGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFI 424
GPPG GKTL+AKA AGE+GVPF ++GS+F+E+ VGVG +R+R+LF+ A+ PS+IFI
Sbjct: 469 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 528
Query: 425 DEIDXXXXXX-------XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDI 477
DEID ERE+TLNQLL+E+DGF T GV+ + TNR D+
Sbjct: 529 DEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDL 588
Query: 478 LDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGAD 537
LD ALLRPGRFDR+I + P+ KGR I +++ K+K+ S A+ PG++GA
Sbjct: 589 LDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSY--ASNLPGWSGAK 646
Query: 538 IANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAV 597
+A + EAAL+A R ++ + + A+DR+ G + + + A E G A+
Sbjct: 647 LAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAI 706
Query: 598 AGWFL---EHA--EPLLKVTIVPRG-TAALGFAQYVPNENLLLTK-EQLFDMTCMTLGGR 650
L E+A E +V+I+PRG T + + +E+ + + QL + LGGR
Sbjct: 707 TSHLLLRYENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGR 766
Query: 651 AAEQVLLGKISTGAQND 667
AAE+V+ G ++ A D
Sbjct: 767 AAEEVIYGSDTSKASVD 783
Score = 44 (20.5 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 720 EWVGKAYVRTVQLIEEHKEHVAQIAELLL-EKEV 752
E + + Y +TV L+ +++ + + ++LL +KE+
Sbjct: 856 ELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEI 889
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 132/261 (50%), Positives = 176/261 (67%)
Query: 317 KNAKNK-VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLL 375
+ +KN V F DV G D AK E++E V L+ Y+ LGA++P+G LLVGPPGTGKTLL
Sbjct: 324 RRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLL 383
Query: 376 AKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXX 435
A+A AGE+GVPF S+S S+F+E+FVG G +R+R+LF AR+ +PSIIFIDE+D
Sbjct: 384 ARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRG 443
Query: 436 XXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITID 495
NDER+ TLNQLL EMDGF + V+VIA TNRP+ LD AL RPGRF R++ +
Sbjct: 444 RSF----NDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVA 499
Query: 496 KPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENS 555
+PD +GR +I ++L+ + L+ + +A+LTPGF GAD+AN+ NEAAL+AAR
Sbjct: 500 EPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGE 559
Query: 556 QVTMEHFEAAIDRVIGGLEKK 576
V E AI+R G+ K
Sbjct: 560 AVAREDIMEAIERAKFGINDK 580
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 637 (229.3 bits), Expect = 2.9e-61, P = 2.9e-61
Identities = 161/439 (36%), Positives = 236/439 (53%)
Query: 327 DVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
DV G + AK+ ++E V +LK P K + G KIP G L GPPGTGKTLLAKA AGE +P
Sbjct: 852 DVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELP 911
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F S++ S+ G ++ LF AR+ APSIIFIDEID D +
Sbjct: 912 FFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSRD-K 970
Query: 447 ESTLNQLLVEMDGFGTT-AGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQI 505
T+N LL EMDGF V V+A TN P +LD A+ RPGRFD I D P+ R
Sbjct: 971 NLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIF 1030
Query: 506 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAA 565
F+ + K KL+ + + Q+L + G + A+I V E+ + A GEN Q+T EH +
Sbjct: 1031 FKRFASKHKLNWQETEL-QQLVSSAQGMSSAEIDQVLRES-IYQAVGENQQLTTEHIKQT 1088
Query: 566 IDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF-A 624
+ R++ G + + E+R AYHE+ H +A L +P+ +TI PR A LGF A
Sbjct: 1089 MIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQA-LGFVA 1147
Query: 625 QYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG---KISTGAQNDLEKVTKMTYAQVAV 681
E +K ++ + L GR AE++ G ++STGA ND+EK T++ A A+
Sbjct: 1148 TRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQL--AMHAI 1205
Query: 682 Y--GFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEH 739
Y G VG ++ FE S ++ A V++W+ ++ + QL+++H +
Sbjct: 1206 YEGGIEPTVGPVNIAMLTK-FEESDLLANAQQA-----VKQWLDQSEQQVEQLLKDHYQQ 1259
Query: 740 VAQIAELLLEKEVLHQDDL 758
+ +AE LL+KE L +++
Sbjct: 1260 LTLVAETLLDKESLLGEEI 1278
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 615 (221.5 bits), Expect = 6.3e-60, P = 6.3e-60
Identities = 159/448 (35%), Positives = 247/448 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 382
V F DVAG + + E+ E V F + Y G KIP G LL GPPG GKTLLAKA AGE
Sbjct: 407 VKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGE 466
Query: 383 SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXX 442
+GV F SIS S F+E++VGVG SRVR L+QEAR+ APS++FIDE+D
Sbjct: 467 AGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG- 525
Query: 443 NDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 502
ER++TLNQLLV +DGF V+ IA TNRPDILD AL+RPGRFDR+I I KP + GR
Sbjct: 526 GQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 585
Query: 503 DQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHF 562
+I QV+ +K + + Y + +A++T G GA++AN+ AA+ R +++T +
Sbjct: 586 MEILQVHARKKPMAEDLDYMA--VASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDL 643
Query: 563 -EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 621
+AA G L++K++ + R VA +E+ AV + + +TI PR L
Sbjct: 644 LQAAQIEERGMLDRKDRSLETW--RQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGREL 701
Query: 622 GFAQ----YVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMT 675
G+ + ++ + +L+++ + D + L RAA+++ G+ +ST + +
Sbjct: 702 GYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLST-IWAETSDNARSA 760
Query: 676 YAQVAVYGFSDKV-GLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIE 734
+ + G SDK GL + F ++ + ID E + Y R +++
Sbjct: 761 ARSLVLGGLSDKHHGL-------NNFWVADRIND-----IDVEALRILNMCYERAKEILG 808
Query: 735 EHKEHVAQIAELLLEKEVLHQDDLLRVL 762
++ + ++ E L++K+ L + + ++
Sbjct: 809 RNRTLMDEVVEKLVQKKSLTKQEFFTLV 836
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 607 (218.7 bits), Expect = 5.0e-58, P = 5.0e-58
Identities = 156/439 (35%), Positives = 231/439 (52%)
Query: 327 DVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
DV G AK +++ + ++K P K ++ KIP G L GPPGTGKT LAKA AGE G+P
Sbjct: 869 DVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLP 928
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F S+S S+ +G ++ LF AR+ APSI+FIDEID ER
Sbjct: 929 FFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSR-ER 987
Query: 447 ESTLNQLLVEMDGFGTTAG-VVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQI 505
+ +N LL EMDGF ++ V V+A TN P +LDKA+LRPGRFD I D P+ + R
Sbjct: 988 NAIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIF 1047
Query: 506 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAA 565
F+ + +K L + S + L + + G + A+I V EA + A G +T+EH +
Sbjct: 1048 FEKFAQKQNLQWQQSDLTA-LVSSSQGMSSAEIDQVLREA-IYQAVGTEKPLTIEHIKQT 1105
Query: 566 IDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF-A 624
I RV+ G +N + K E+R A+HE+ H + L + + TI PR + LGF A
Sbjct: 1106 IVRVVYGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQS-LGFVA 1164
Query: 625 QYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG---KISTGAQNDLEKVTKMTYAQVAV 681
E +K ++ + + L GR AE++ +ISTGA ND+EK T++ A A+
Sbjct: 1165 TRASEEYESYSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQL--AMHAI 1222
Query: 682 Y--GFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEH 739
Y G + VG P ++K S+ A V++W+ A +L+ ++
Sbjct: 1223 YDGGIEESVG----PVNVGI--LTKFEESELLAKAQKAVQQWLITAEQSVEKLLNDNCHQ 1276
Query: 740 VAQIAELLLEKEVLHQDDL 758
+ +A LLEKE L D++
Sbjct: 1277 LELVANTLLEKESLLSDEI 1295
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 579 (208.9 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 159/473 (33%), Positives = 241/473 (50%)
Query: 306 NIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHFLKNPRKYEDLGAKIPKGALLV 365
++GK+ + K V F D AG + K+E+ E V LKN ++++ G PKG LL
Sbjct: 296 SLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 355
Query: 366 GPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFID 425
GPPGTGKTLLAKA AGE+G+PF + +G+DF+EMFVGV SRV++LF +R APSIIFID
Sbjct: 356 GPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFID 415
Query: 426 EIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFG-TTAGVVVIAGTNRPDILDKALLR 484
EID ERE L Q+L EMDGF TT+ V+VI TNR DILD ALLR
Sbjct: 416 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLR 475
Query: 485 PGRFDRQITIDKPDIKGRDQIFQVYLKK--IKLDHEPSYYSQRLAALTPGFAGADIANVC 542
GRFD+ I + P GR I +V+ + + + E Q +A T F GA++ NV
Sbjct: 476 KGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVL 535
Query: 543 NEAALIAARGENSQVTMEHFEAAIDRVIG----GLEKKNKVISKLERRTVAYHESGHAVA 598
NEA ++ AR + + E A+ R G G E +V +L+ R +AY E+ AV
Sbjct: 536 NEAGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLR-LAYREAAVAVL 594
Query: 599 GWFL-EHAEPLLKVTIVP-RGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVL 656
+L + P+ + I R + +++ + + K + R E+ +
Sbjct: 595 ACYLPDQYRPISETDINSIRSQPNMRYSE--TSGRVFARKSDYVNSIIRACAPRVVEEEM 652
Query: 657 LGKIST---GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAI 713
G + A++ LE + + + G + G + + D P K A+
Sbjct: 653 FGIENLCWISAKSTLEASQRAEFL-ILQTGMT-AFGKAYYRNQRDLVPNLVP---KLEAL 707
Query: 714 IDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERP 766
D E++ A + +++E++ + +I ++LLEK + D++ + P
Sbjct: 708 RD----EYMRFAVEKCSSILQEYQSALEEITDVLLEKGEIKADEIWNIYNTAP 756
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 116/283 (40%), Positives = 168/283 (59%)
Query: 309 KAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGP 367
+A +VD+ + V + D+ G ++ QEI E V LK+P +E +G + PKG LL GP
Sbjct: 155 RAKAMEVDE--RPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGP 212
Query: 368 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEI 427
PGTGKTLLAKA A E+ F+ + GS+ ++ F+G G S V+++F+ A++ APSIIFIDEI
Sbjct: 213 PGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEI 272
Query: 428 DXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGR 487
D E + TL QLL EMDGF V +I TNRPDILD A+LRPGR
Sbjct: 273 DAIAAKRTDALTGGDR-EVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGR 331
Query: 488 FDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 547
FDR I + PD KGR +I +++ +K+ L + + + +A +T G GA++ +C EA +
Sbjct: 332 FDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAICTEAGM 389
Query: 548 IAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAY 590
A R VTM+ F A++++ +EKK + + V Y
Sbjct: 390 NAIRELRDYVTMDDFRKAVEKI---MEKKKVKVKEPAHLDVLY 429
>WB|WBGene00021615 [details] [associations]
symbol:Y47C4A.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 100/168 (59%), Positives = 125/168 (74%)
Query: 445 ERESTLNQLLVEMDGFGTTAG-VVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E E TLNQLLVEMD G+ G VVV+A TNR D+LDKALLRPGRFDR I+ID P + R
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+F++Y++KIKLDH P YSQRLA LTP F GADI NVCNE+A+ AA + VT++ E
Sbjct: 114 DMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDME 173
Query: 564 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKV 611
A+DRV+ G EK+++ + + ER VAYHE+GHA+ GW LEH + LLKV
Sbjct: 174 YALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKV 221
>WB|WBGene00022429 [details] [associations]
symbol:Y108F1.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 100/168 (59%), Positives = 125/168 (74%)
Query: 445 ERESTLNQLLVEMDGFGTTAG-VVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E E TLNQLLVEMD G+ G VVV+A TNR D+LDKALLRPGRFDR I+ID P + R
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+F++Y++KIKLDH P YSQRLA LTP F GADI NVCNE+A+ AA + VT++ E
Sbjct: 114 DMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDME 173
Query: 564 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKV 611
A+DRV+ G EK+++ + + ER VAYHE+GHA+ GW LEH + LLKV
Sbjct: 174 YALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKV 221
>WB|WBGene00022222 [details] [associations]
symbol:Y73B3A.21 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006898 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 EMBL:FO081721 RefSeq:NP_508082.2
ProteinModelPortal:Q95XE1 SMR:Q95XE1 STRING:Q95XE1 PaxDb:Q95XE1
EnsemblMetazoa:Y73B3A.21 GeneID:190639 KEGG:cel:CELE_Y73B3A.21
UCSC:Y73B3A.21 CTD:190639 WormBase:Y73B3A.21 OMA:GEAYERT
NextBio:946466 Uniprot:Q95XE1
Length = 242
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 103/210 (49%), Positives = 141/210 (67%)
Query: 540 NVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAG 599
NVCNE+A+ AA + VT++ E A+DRV+ G EK+++ + + ER VAYHE+GHA+ G
Sbjct: 2 NVCNESAIRAAFNKCHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVG 61
Query: 600 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLG 658
W LEH + LLKVTI+P+ +AALGFAQY P ++ L +K++LFD CM LGGR AE + G
Sbjct: 62 WMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELFDRMCMMLGGRCAENLKFG 121
Query: 659 KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEV 718
+I++GAQ+DL+KVTK YAQV +YG S VG LSFP E F++ KPYS K + D E
Sbjct: 122 RITSGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTEG-FQI-KPYSKKFASTFDQEA 179
Query: 719 REWVGKAYVRTVQLIEEHKEHVAQIAELLL 748
V KA T LI+ + + + + LL
Sbjct: 180 TLIVAKANEATTDLIKNNMDKLETVCARLL 209
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 109/257 (42%), Positives = 149/257 (57%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D +EI E + +K+P ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 177 VGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 236
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 237 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGG-DSEV 295
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I PD K R QI
Sbjct: 296 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQIL 355
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L ++A PG +GA++ +VC EA + A R VT E FE A+
Sbjct: 356 KIHSRKMNLMR--GIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAV 413
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 414 GKVMQKDSEKNMSIKKL 430
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 484 (175.4 bits), Expect = 4.0e-46, P = 4.0e-46
Identities = 108/257 (42%), Positives = 149/257 (57%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D+ +EI E + +K+P ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 161 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECT 220
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 221 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG-DSEV 279
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I PD K R I
Sbjct: 280 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADIL 339
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L ++A PG +GA++ +VC EA + A R VT E FE A+
Sbjct: 340 KIHSRKMNLMR--GINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAV 397
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 398 GKVMQKDSEKNMSIKKL 414
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 157 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 216
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 217 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 275
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 276 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 335
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 336 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 393
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 394 AKVMQKDSEKNMSIKKL 410
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 159 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 218
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 219 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 277
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 278 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 337
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 338 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 395
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 396 AKVMQKDSEKNMSIKKL 412
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 159 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 218
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 219 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 277
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 278 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 337
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 338 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 395
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 396 AKVMQKDSEKNMSIKKL 412
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 482 (174.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 151 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 210
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-DSEV 269
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 270 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 329
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 330 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 388 AKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 481 (174.4 bits), Expect = 9.2e-46, P = 9.2e-46
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 146 IGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 205
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 206 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG--DSEV 263
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 264 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDIL 323
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 324 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 381
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 382 AKVMQKDSEKNMSIKKL 398
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 479 (173.7 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 104/267 (38%), Positives = 148/267 (55%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
A VT + K + ++DV GC E +++ E V L +P K+ +LG PKG L+ GPP
Sbjct: 154 ASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPP 213
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTL A+A A + F+ + GS+ ++ +VG G VR+LFQ AR IIF DE+D
Sbjct: 214 GTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVD 273
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
N E + T+ +L+ ++DGF + V+ TNRPD LD ALLRPGR
Sbjct: 274 AIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRL 332
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR++ PD++GR IF ++ K + + + + LA L P GADI +VC EA +
Sbjct: 333 DRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRF--ELLARLCPNSTGADIRSVCTEAGMF 390
Query: 549 AARGENSQVTMEHFEAAIDRVIGGLEK 575
A R V+ + F AID+VI K
Sbjct: 391 AIRARRKVVSEKDFLEAIDKVIKSYAK 417
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 479 (173.7 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 107/257 (41%), Positives = 151/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D+ +EI E + +K+P ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 150 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 209
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 210 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGG-DSEV 268
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P+ + R I
Sbjct: 269 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDIL 328
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A L PG +GA++ VC EA + A R VT E FE A+
Sbjct: 329 KIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 386
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ +KN I KL
Sbjct: 387 AKVMQKDSEKNMSIKKL 403
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 461 (167.3 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 100/257 (38%), Positives = 146/257 (56%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
+ G D+ +EI E + LK+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 134 IGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCR 193
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID + E
Sbjct: 194 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSG-DSEV 252
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + +I TNR DILD ALLRPGR DR+I P ++ R I
Sbjct: 253 QRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADIL 312
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ + + L + ++A G +GA++ VC EA + A R VT E F+ A
Sbjct: 313 RIHSRSMNLTRGINL--TKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLAT 370
Query: 567 DRVIGGLEKKNKVISKL 583
+++ + K +SKL
Sbjct: 371 AKILNKHDDKEVAVSKL 387
Score = 38 (18.4 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 172 LLEPGLVDHIVVSNKSVAKVFVRSSPHNQTIED 204
L +PG VV S KV V+ P + + D
Sbjct: 49 LQQPGSYVGEVVKVMSTKKVLVKVHPEGKYVVD 81
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 477 (173.0 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 108/269 (40%), Positives = 151/269 (56%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G + QEI E V L +P YED+G K PKG +L GPPGT
Sbjct: 181 VMKVEK-APLESY-ADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A E+ FL + GS+ ++ ++G GP VR +F+ A + APSI+FIDEID
Sbjct: 239 GKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAV 298
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR D LD AL+RPGR DR
Sbjct: 299 GTKRYEATSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD K + +IFQ++ K+ + P + +GADI +C EA L+A
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMS--PDVDLEEFVMSKDELSGADIKAICTEAGLLAL 415
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
R ++T A D+ + +KK +
Sbjct: 416 RERRMKITQADLRKARDKAL--FQKKGNI 442
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 477 (173.0 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 108/269 (40%), Positives = 151/269 (56%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G + QEI E V L +P YED+G K PKG +L GPPGT
Sbjct: 181 VMKVEK-APLESY-ADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A E+ FL + GS+ ++ ++G GP VR +F+ A + APSI+FIDEID
Sbjct: 239 GKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAV 298
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR D LD AL+RPGR DR
Sbjct: 299 GTKRYEATSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD K + +IFQ++ K+ + P + +GADI +C EA L+A
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMS--PDVDLEEFVMSKDELSGADIKAICTEAGLLAL 415
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
R ++T A D+ + +KK +
Sbjct: 416 RERRMKITQADLRKARDKAL--FQKKGNI 442
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 493 (178.6 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 103/258 (39%), Positives = 157/258 (60%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
KV++ D+ G + KQ++ E + + LK P+ + +G K PKG LL GPPG KTLLAKA A
Sbjct: 618 KVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALA 677
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
ESG+ F+++ G + + +VG VR++F++ARQ +PSI+F DEID
Sbjct: 678 TESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSG 737
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
E ++QLL EMDG V +I TNRPDI+DKA+LR GR DR + I PD+
Sbjct: 738 AV----ERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLD 793
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE-NS-QVT 558
R +IF ++LKK+ H +L+ LT G++GA++ ++C EA++ A + + N+ ++
Sbjct: 794 ARKEIFNIHLKKVP--HSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKEIN 851
Query: 559 MEHFEAAIDRVIGGLEKK 576
M HF +AI V G+ ++
Sbjct: 852 MSHFISAIGNVKKGITQE 869
Score = 363 (132.8 bits), Expect = 5.9e-30, P = 5.9e-30
Identities = 93/256 (36%), Positives = 135/256 (52%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVH--FLKNPRKYEDLGAKIPKGALLVGPPGTG 371
K+D N + F+ + G D ++I E + F K + G K PKG LL GPPGTG
Sbjct: 300 KIDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDL-LKSFGVKPPKGILLYGPPGTG 358
Query: 372 KTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXX 431
KTLLA+ A ++ +I+G+D ++ F G+ ++ +F++A Q +PSIIFIDE+D
Sbjct: 359 KTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALC 418
Query: 432 XXXXXXXXXXXNDERESTLNQLLVEMDGF------------------GTTAG--VVVIAG 471
++ + + LL MDG G G V+VI
Sbjct: 419 PKREDNS----SEVEKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGC 474
Query: 472 TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTP 531
TNRPD +D AL RPGRFD +I I P+ +GR+QI ++L KI + S +A+ T
Sbjct: 475 TNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIP-NQLTSQEIAMIASKTH 533
Query: 532 GFAGADIANVCNEAAL 547
GF GADI ++C EA+L
Sbjct: 534 GFVGADIESLCKEASL 549
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 474 (171.9 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 101/265 (38%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V + +P K+ LG PKG L GPPGT
Sbjct: 154 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR I+F DE+D
Sbjct: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +++ ++DGF + V+ TNRPD LD ALLRPGR DR
Sbjct: 274 GGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD++ R QIF+++ + + + + + + LA L P GADI +VC EA + A
Sbjct: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVCTEAGMYAI 390
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R VT + F A+++VI G +K
Sbjct: 391 RARRKTVTEKDFLDAVNKVIKGYQK 415
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 105/256 (41%), Positives = 150/256 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D+ QEI E + +K+P ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 145 VGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECT 204
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ F+G G VR LF AR+ APSIIF+DEID + E
Sbjct: 205 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG--DSEV 262
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR D+LD+ALLRPGR DR+I P+ + R I
Sbjct: 263 QRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDIL 322
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A PG +GA++ VC EA + A R VT E FE A+
Sbjct: 323 KIHSRKMNLTRGINL--RKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 380
Query: 567 DRVIGGLEKKNKVISK 582
+V+ +KN I K
Sbjct: 381 SKVMMKDSEKNMSIRK 396
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 172 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 289
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 290 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 349 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 406
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 407 RERRMKVTNEDFKKSKENVL 426
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 171 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 228
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 229 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 288
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 289 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 347
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 348 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 405
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 406 RERRMKVTNEDFKKSKENVL 425
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 112/269 (41%), Positives = 153/269 (56%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G + QEI E V L +P YED+G K PKG +L G PGT
Sbjct: 176 VMKVEK-APLESY-ADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGT 233
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A + FL + GS+ ++ ++G GP VR LF+ A +PSI+FIDEID
Sbjct: 234 GKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAV 293
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD ALLRPGR DR
Sbjct: 294 GTKRYDAHSGGER-EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDR 352
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PDIK R +IFQ++ K+ L + + + F+GADI +C EA L+A
Sbjct: 353 KIEFPLPDIKTRRRIFQIHTSKMTLSEDVNL--EEFVMTKDEFSGADIKAICTEAGLLAL 410
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
R +VT F+ A ++V+ +KK V
Sbjct: 411 RERRMKVTHPDFKKAKEKVM--FKKKEGV 437
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 454 (164.9 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 99/257 (38%), Positives = 149/257 (57%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G + +EI E + +K+P +E LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK 209
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SG++ ++ ++G G VR LF AR+ APSIIF+DEID + E
Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGG-DSEV 268
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T+ + +I TNR DILD ALLRPGR DR+I P + R +I
Sbjct: 269 QRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEIL 328
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + +++A G +GAD+ VC EA + A R VT E FE A+
Sbjct: 329 RIHSRKMNLTRGINL--RKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAV 386
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ ++ ++KL
Sbjct: 387 GKVMNKNQETAISVAKL 403
Score = 39 (18.8 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 162 QISFQEFKNKLL-EPGLVDHIVVSNKSVAKVFVRSSPHNQTIED 204
++ F + + +LL EPG V+ S KV V+ P + I D
Sbjct: 54 KVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVD 97
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 100 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 157
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 158 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 217
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 218 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 276
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 277 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 334
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 335 RERRMKVTNEDFKKSKENVL 354
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 470 (170.5 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 469 (170.2 bits), Expect = 2.5e-44, P = 2.5e-44
Identities = 112/269 (41%), Positives = 153/269 (56%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G + QEI E V L +P YED+G K PKG +L G PGT
Sbjct: 176 VMKVEK-APLESY-ADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGT 233
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A + FL + GS+ ++ ++G GP VR LF+ A +PSI+FIDEID
Sbjct: 234 GKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAV 293
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD ALLRPGR DR
Sbjct: 294 GTKRYDANSGGER-EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDR 352
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PDIK R +IFQ++ K+ L + + + F+GADI +C EA L+A
Sbjct: 353 KIEFPLPDIKTRRRIFQIHTSKMTLAEDVNL--EEFVMTKDEFSGADIKAICTEAGLLAL 410
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
R +VT F+ A ++V+ +KK V
Sbjct: 411 RERRMKVTHVDFKKAKEKVM--FKKKEGV 437
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 468 (169.8 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 103/261 (39%), Positives = 151/261 (57%)
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPG 369
+V KV+K A + Y D+ G + QE+ E + L +P YE++G K PKG +L G PG
Sbjct: 171 NVMKVEK-APTESY-SDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPG 228
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A +CAPSI+FIDEID
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDA 288
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFD 489
E + T+ +LL ++DGF V VI TNR + LD AL+RPGR D
Sbjct: 289 VGTKRYDSQSGGER-EIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRID 347
Query: 490 RQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 549
R+I PDIK + +IF+++ K+ L + + + +GADI +C E+ L+A
Sbjct: 348 RKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNL--EEFVMSKDDLSGADIKAICTESGLLA 405
Query: 550 ARGENSQVTMEHFEAAIDRVI 570
R +VT F+ A ++V+
Sbjct: 406 LRERRMRVTHTDFKKAKEKVL 426
>UNIPROTKB|H3BTY6 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006508 GO:GO:0004222 EMBL:AC092123 HGNC:HGNC:11237
ChiTaRS:SPG7 Ensembl:ENST00000561911 Bgee:H3BTY6 Uniprot:H3BTY6
Length = 210
Score = 467 (169.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 87/159 (54%), Positives = 120/159 (75%)
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+IF+ +LK +KL ++YSQRLA LTPGF+GADIAN+CNEAAL AAR ++ V +FE
Sbjct: 2 EIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 61
Query: 564 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF 623
A++RV+ G KK+K++SK E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGF
Sbjct: 62 YAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGF 121
Query: 624 AQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKIST 662
AQ +P + L TKEQLF+ CM LGGRA+E + ++++
Sbjct: 122 AQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTS 160
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 467 (169.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 108/274 (39%), Positives = 153/274 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K+DK+ + D+ G + QEI E V L +P YE++G K PKG +L G PGT
Sbjct: 170 VMKMDKSPTES--YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGT 227
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL I GS+ ++ ++G GP R +F+ A + APSI+FIDEID
Sbjct: 228 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAI 287
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF V VI TN+ + LD AL+RPGR DR
Sbjct: 288 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDR 346
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD+ + +I ++ K+ L + + + L +GADI +C EA L+A
Sbjct: 347 KILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAMCTEAGLLAL 404
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLE 584
R QVT E F+ A +RV+ KNKV LE
Sbjct: 405 RERRMQVTAEDFKQAKERVM-----KNKVEENLE 433
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 466 (169.1 bits), Expect = 5.5e-44, P = 5.5e-44
Identities = 106/260 (40%), Positives = 151/260 (58%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K++K A + Y DV G D+ QEI E V L +P YE++G + PKG +L G PGT
Sbjct: 176 VMKLEK-APQETY-ADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGT 233
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL I GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 234 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAV 293
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 294 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDR 352
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L E + + +GADI +C EA L+A
Sbjct: 353 KIEFPLPDEKTKRRIFQIHTSRMTLGKEVNL--EEFITAKDELSGADIKAMCTEAGLLAL 410
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VTME F+ + + V+
Sbjct: 411 RERRMRVTMEDFQKSKENVL 430
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 449 (163.1 bits), Expect = 8.5e-44, Sum P(2) = 8.5e-44
Identities = 97/244 (39%), Positives = 142/244 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D+ +EI E + +K+P +E LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 146 VGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECK 205
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID + E
Sbjct: 206 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG-DSEV 264
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF ++ + +I TNR DILD ALLRPGR DR+I P + R I
Sbjct: 265 QRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDIL 324
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ + + L + +++A G +GAD+ VC EA + A R VT E FE A+
Sbjct: 325 KIHSRSMNLTRGINL--RKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAV 382
Query: 567 DRVI 570
+V+
Sbjct: 383 AKVM 386
Score = 37 (18.1 bits), Expect = 8.5e-44, Sum P(2) = 8.5e-44
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 171 KLL-EPGLVDHIVVSNKSVAKVFVRSSPHNQTI 202
KLL EPG VV + KV V+ P + I
Sbjct: 59 KLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKFI 91
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 464 (168.4 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 105/274 (38%), Positives = 157/274 (57%)
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPG 369
++ KV+K + Y + G D+ +EI E + +K+P +E LG PKG LL GPPG
Sbjct: 148 NLMKVEK-VPDSTYDM-IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFD 489
+ E + T+ +LL ++DGF + + V+ TNR DILD+ALLRPGR D
Sbjct: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
Query: 490 RQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 549
R+I P+ + R I +++ +K+ L +++A G +GA++ VC EA + A
Sbjct: 326 RKIEFPNPNEESRFDILKIHSRKMNLMRGIDL--KKIAEKMNGASGAELKAVCTEAGMFA 383
Query: 550 ARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKL 583
R VT E FE A+ +V+ +KN + KL
Sbjct: 384 LRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKL 417
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 464 (168.4 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 105/274 (38%), Positives = 157/274 (57%)
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPG 369
++ KV+K + Y + G D+ +EI E + +K+P +E LG PKG LL GPPG
Sbjct: 148 NLMKVEK-VPDSTYDM-IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFD 489
+ E + T+ +LL ++DGF + + V+ TNR DILD+ALLRPGR D
Sbjct: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
Query: 490 RQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 549
R+I P+ + R I +++ +K+ L +++A G +GA++ VC EA + A
Sbjct: 326 RKIEFPNPNEESRFDILKIHSRKMNLMRGIDL--KKIAEKMNGASGAELKAVCTEAGMFA 383
Query: 550 ARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKL 583
R VT E FE A+ +V+ +KN + KL
Sbjct: 384 LRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKL 417
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 463 (168.0 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKVATEKDFLEAVNKVIKSYAK 422
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 463 (168.0 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 100/265 (37%), Positives = 147/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC + +++ E V L +P +Y +LG + PKG LL GPPGT
Sbjct: 163 VTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGT 222
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 223 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAV 282
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 283 GGARFDDGQGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 341
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD+ GR I +++ K++ ++ + Y LA L P GA+I +VC EA + A
Sbjct: 342 KVEFALPDLAGRAHILKIHAKQMSVERDIRY--DLLARLCPNSTGAEIRSVCTEAGMFAI 399
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F AI++V+ G K
Sbjct: 400 RARRKVATEKDFLEAINKVVKGYAK 424
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 463 (168.0 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 105/264 (39%), Positives = 147/264 (55%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGK 372
KV+K K F D+ GC+ QE+ E V L +P YE++G PKG +L G PGTGK
Sbjct: 173 KVEKTPKET--FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGK 230
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLAKA A + F+ +GSD ++ G G VR +FQ A++ APSI+FIDEID
Sbjct: 231 TLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGT 290
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
E + TL +LL ++DGF + V +I TNR D LD AL+RPGR DR+I
Sbjct: 291 KRFDTSSRG-EQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKI 349
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
+ KPD K R +IF ++ + + +Y + + +GA+I VC EA ++A R
Sbjct: 350 ELPKPDEKTRQKIFTIHTSGMTIQKAVTY--ENVLGKEKSISGAEIKAVCTEAGMLALRA 407
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKK 576
+ V + FE A+ V+ L KK
Sbjct: 408 QRKCVGTDDFEKAVKSVM--LSKK 429
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 463 (168.0 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 100/265 (37%), Positives = 147/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC + +++ E V L +P +Y +LG + PKG LL GPPGT
Sbjct: 163 VTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGT 222
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 223 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAV 282
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 283 GGARFDDGQGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 341
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD+ GR I +++ K++ ++ + Y LA L P GA+I +VC EA + A
Sbjct: 342 KVEFALPDLAGRAHILKIHAKQMSVERDIRY--DLLARLCPNSTGAEIRSVCTEAGMFAI 399
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F AI++V+ G K
Sbjct: 400 RARRKVATEKDFLEAINKVVKGYAK 424
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 463 (168.0 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 107/260 (41%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L G PGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ + + S LA +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAK--DDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 102/257 (39%), Positives = 150/257 (58%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G D+ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 147 VGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 206
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID + E
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEV 266
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF +T + V+ TNR DILD ALLRPGR DR+I P GR I
Sbjct: 267 QRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDIL 326
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ +K+ L + ++++ G +GA++ VC EA + A R V+ E FE A+
Sbjct: 327 KIHSRKMNLTRGINL--KKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAV 384
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ ++N I+KL
Sbjct: 385 SKVMKKDSEQNMSINKL 401
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 106/260 (40%), Positives = 152/260 (58%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K++K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 172 VMKLEK-APQETY-ADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAV 289
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 290 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IF ++ ++ L + + S+ + A +GADI +C EA L+A
Sbjct: 349 KIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL-SELIMA-KDDLSGADIKAICTEAGLMAL 406
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 407 RERRMKVTNEDFKKSKESVL 426
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 152 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 211
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 212 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 271
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 272 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 330
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 331 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 388
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 389 RARRKIATEKDFLEAVNKVIKSYAK 413
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 160 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 219
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 220 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 279
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 280 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 338
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 339 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 396
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 397 RARRKIATEKDFLEAVNKVIKSYAK 421
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 24 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 83
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 84 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 143
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 144 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 202
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 203 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 260
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 261 RARRKIATEKDFLEAVNKVIKSYAK 285
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 203 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 262
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 263 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 322
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 323 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 381
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 382 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 439
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 440 RARRKIATEKDFLEAVNKVIKSYAK 464
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 162 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 221
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 222 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 281
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 282 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 340
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 341 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 398
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 399 RARRKIATEKDFLEAVNKVIKSYAK 423
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC + +++ E V L +P ++ LG PKG LL GPPGT
Sbjct: 195 VTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGT 254
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR IIF DEID
Sbjct: 255 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAV 314
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRP+ LD ALLRPGR DR
Sbjct: 315 GGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDR 373
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD++GR IF+++ K + ++ + + ++ L P GA++ +VC EA + A
Sbjct: 374 KVEFSLPDLEGRANIFRIHSKSMSVERGIRW--ELISRLCPNSTGAELRSVCTEAGMFAI 431
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+D+VI G +K
Sbjct: 432 RARRKVATEKDFLKAVDKVISGYKK 456
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 462 (167.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 99/265 (37%), Positives = 148/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 461 (167.3 bits), Expect = 2.1e-43, P = 2.1e-43
Identities = 100/274 (36%), Positives = 151/274 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG PKGALL GPPGT
Sbjct: 171 VTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR IIF DEID
Sbjct: 231 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAV 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRP LD AL+RPGR DR
Sbjct: 291 GGARFDDGAGGDN-EVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR I +++ K + ++ + + + ++ L P GA++ +V EA + A
Sbjct: 350 KIEFSLPDVEGRANILRIHAKSMSVERDIRW--ELISRLCPNATGAELRSVATEAGMFAI 407
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLE 584
R T + F AA+D+VI G K N + ++
Sbjct: 408 RARRKVATEKDFLAAVDKVIKGNLKFNSTATYMQ 441
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 460 (167.0 bits), Expect = 2.7e-43, P = 2.7e-43
Identities = 107/283 (37%), Positives = 153/283 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K+DK+ + D+ G + QEI E V L +P YE++G K PKG +L G PGT
Sbjct: 174 VMKLDKSPTES--YADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGT 231
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL I GS+ ++ ++G GP R +FQ A APSI+FIDEID
Sbjct: 232 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAI 291
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + VI TN+ + LD AL+RPGR DR
Sbjct: 292 GTKRYESTSGGER-EIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDR 350
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD + +I ++ K+ L + + + +GADI +C EA L+A
Sbjct: 351 KILFENPDANTKKKILTIHTSKMSLADDVNL--DEIVTGKDDLSGADIKAICTEAGLLAL 408
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHES 593
R QV E F++A +RV+ KNKV LE + H +
Sbjct: 409 RERRMQVKAEDFKSAKERVL-----KNKVEENLEGLNLQVHRN 446
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 460 (167.0 bits), Expect = 2.7e-43, P = 2.7e-43
Identities = 106/271 (39%), Positives = 156/271 (57%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGK 372
KV+K + Y V G D+ +E+ E + +K+P +E LG PKG LL GPPGTGK
Sbjct: 169 KVEK-VPDSTY-EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGK 226
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID
Sbjct: 227 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 286
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
+ E + T+ +LL ++DGF +T + VI TNR DILD+ALLRPGR DR+I
Sbjct: 287 QRIEGEHG--DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
P+++ R +I +++ +K+ L ++A +GA++ VC EA + A R
Sbjct: 345 EFPNPNVEARMEILKIHSRKMNLMRGIDML--KIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKL 583
VT E FE A+ +V+ +KN + KL
Sbjct: 403 RRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL 433
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 460 (167.0 bits), Expect = 2.7e-43, P = 2.7e-43
Identities = 104/253 (41%), Positives = 145/253 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K++K A + Y D+ G D QEI E V L +P YE++G K PKG +L GPPGT
Sbjct: 173 VMKLEK-APQETY-ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + PSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ L + + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFE 563
R +VT E F+
Sbjct: 408 RERRMKVTNEDFK 420
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 460 (167.0 bits), Expect = 2.7e-43, P = 2.7e-43
Identities = 106/271 (39%), Positives = 156/271 (57%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGK 372
KV+K + Y V G D+ +E+ E + +K+P +E LG PKG LL GPPGTGK
Sbjct: 169 KVEK-VPDSTY-EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGK 226
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID
Sbjct: 227 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 286
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
+ E + T+ +LL ++DGF +T + VI TNR DILD+ALLRPGR DR+I
Sbjct: 287 QRIEGEHG--DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
P+++ R +I +++ +K+ L ++A +GA++ VC EA + A R
Sbjct: 345 EFPNPNVEARMEILKIHSRKMNLMRGIDML--KIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 553 ENSQVTMEHFEAAIDRVIGGLEKKNKVISKL 583
VT E FE A+ +V+ +KN + KL
Sbjct: 403 RRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL 433
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 459 (166.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 101/257 (39%), Positives = 144/257 (56%)
Query: 328 VAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 386
V G ++ +EI E + +K+P +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 147 VGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCK 206
Query: 387 FLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDER 446
F+ +SGS+ ++ ++G G VR LF AR+ APSIIF+DEID + E
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEV 266
Query: 447 ESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 506
+ T+ +LL ++DGF T + VI TNR DILD ALLRPGR DR+I P + R +I
Sbjct: 267 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEIL 326
Query: 507 QVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
+++ + + L S +A G +GA++ VC EA + A R VT E FE A+
Sbjct: 327 RIHSRSMNLTRGIDLKS--IAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAV 384
Query: 567 DRVIGGLEKKNKVISKL 583
+V+ + + KL
Sbjct: 385 AKVLNKGDSGEMSLQKL 401
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 459 (166.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 106/260 (40%), Positives = 150/260 (57%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V KV+K A + Y D+ G D QEI E V L +P YE++G K PKG +L G PGT
Sbjct: 173 VMKVEK-APQETY-ADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEID
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF + V VI TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD K + +IFQ++ ++ + + + LA +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAK--DDLSGADIKAICTEAGLMAL 407
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +VT E F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 457 (165.9 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 95/265 (35%), Positives = 146/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K + + D+ GC E +++ E V L P ++ LG PKG LL GPPGT
Sbjct: 148 VTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGT 207
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LFQ A+ I+FIDE+D
Sbjct: 208 GKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
+ E + T+ +++ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 268 GGSRGDESAHGDH-EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDR 326
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + + + + LA L P G+DI +VC EA + A
Sbjct: 327 RIEFSLPDLEGRTHIFKIHANTMNMSRDVRF--ELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R +T + AI++VI G ++
Sbjct: 385 RARRKTITEKDLLLAINKVIHGCKQ 409
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 457 (165.9 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 95/265 (35%), Positives = 146/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K + + D+ GC E +++ E V L P ++ LG PKG LL GPPGT
Sbjct: 148 VTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGT 207
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LFQ A+ I+FIDE+D
Sbjct: 208 GKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
+ E + T+ +++ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 268 GGSRGDESAHGDH-EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDR 326
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR IF+++ + + + + + LA L P G+DI +VC EA + A
Sbjct: 327 RIEFSLPDLEGRTHIFKIHANTMNMSRDVRF--ELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R +T + AI++VI G ++
Sbjct: 385 RARRKTITEKDLLLAINKVIHGCKQ 409
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 456 (165.6 bits), Expect = 7.7e-43, P = 7.7e-43
Identities = 98/265 (36%), Positives = 147/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD++GR I +++ + + ++ + + + LA L P GA+I +VC EA + A
Sbjct: 340 KIEFSLPDLEGRTHILKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+++VI K
Sbjct: 398 RARRKIATEKDFLEAVNKVIKSYAK 422
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 440 (159.9 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 103/267 (38%), Positives = 147/267 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I I+ P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I + Y + + L+ GF GAD+ NVC EA + A R ++ VT E
Sbjct: 309 RLDILKIHSGPITKHGDIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 37 (18.1 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 159 EQQQISFQEFKNKLLEPGLVD 179
E ++ Q+++ KLLE +D
Sbjct: 3 ENREKGLQDYRKKLLEHKEID 23
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 454 (164.9 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 99/265 (37%), Positives = 144/265 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P K+ +LG + PKG LL GPPGT
Sbjct: 161 VTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGT 220
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR +IF DEID
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAI 280
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRPD LD AL+RPGR DR
Sbjct: 281 GGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD GR IF+++ + + ++ + + LA L P GA+I +VC EA + A
Sbjct: 340 KVEFGLPDQDGRSHIFKIHARSMSVERDIRF--DLLARLCPNSTGAEIRSVCTEAGMFAI 397
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+ +VI K
Sbjct: 398 RARRKVATEKDFLEAVKKVIKSYAK 422
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 453 (164.5 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 96/262 (36%), Positives = 145/262 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E +++ E V L +P ++ LG PKG LL GPPGT
Sbjct: 172 VTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGT 231
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR IIF DE+D
Sbjct: 232 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAI 291
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRP+ LD ALLRPGR DR
Sbjct: 292 GGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDR 350
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD++GR IF+++ K + ++ + + + ++ L P GA++ +VC EA + A
Sbjct: 351 KVEFSLPDLEGRANIFRIHSKTMSVEKDIRW--ELISRLCPNATGAELRSVCTEAGMFAI 408
Query: 551 RGENSQVTMEHFEAAIDRVIGG 572
R + F A+D+VI G
Sbjct: 409 RARRKVANEKDFLKAVDKVIKG 430
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 453 (164.5 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 96/265 (36%), Positives = 146/265 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
VT + K V + DV GC E + + E V L +P ++ LG PKG +L GPPGT
Sbjct: 165 VTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGT 224
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR IIF DEID
Sbjct: 225 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 284
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
N E + T+ +L+ ++DGF + V+ TNRP+ LD+AL+RPGR DR
Sbjct: 285 GGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDR 343
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
++ PD++GR I +++ K + +D + + + +A L P GA++ +VC EA + A
Sbjct: 344 KVEFGLPDLEGRAHILRIHAKSMAIDKDIRW--ELIARLCPSQTGAELRSVCTEAGMFAI 401
Query: 551 RGENSQVTMEHFEAAIDRVIGGLEK 575
R T + F A+ +V+ G +K
Sbjct: 402 RARRRVATEKDFLDAVQKVVKGNQK 426
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 452 (164.2 bits), Expect = 2.2e-42, P = 2.2e-42
Identities = 103/260 (39%), Positives = 146/260 (56%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K+DK A + Y D+ G + QE+ E V L +P YE++G K PKG +L G PGT
Sbjct: 192 VMKLDK-APTESY-ADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGT 249
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLAKA A ++ FL I GS+ ++ ++G GP VR +FQ A + APSI+FIDEID
Sbjct: 250 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAI 309
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + T+ +LL ++DGF V VI TN+ + LD AL+RPGR DR
Sbjct: 310 GTKRYDSTSGGER-EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDR 368
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD + +IF ++ K+ L + +GADI +C EA L+A
Sbjct: 369 KILFENPDQNTKKKIFTLHTSKMSLGDDVDL--DEFINQKDDLSGADIRAICTEAGLMAL 426
Query: 551 RGENSQVTMEHFEAAIDRVI 570
R +V M+ F AA +R++
Sbjct: 427 RERRMRVQMDDFRAARERIM 446
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 448 (162.8 bits), Expect = 6.2e-42, P = 6.2e-42
Identities = 100/257 (38%), Positives = 152/257 (59%)
Query: 314 KVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGK 372
+VD+ K + D+ G D+ +EI+E + + +K +++ LG K PKGAL+ GPPGTGK
Sbjct: 201 EVDEKPTEK--YTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGK 258
Query: 373 TLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXX 432
TLLA+A A E+ FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 259 TLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGT 318
Query: 433 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQI 492
E + T+ +LL ++DGF + + V+A TNR D+LD ALLR GR DR+I
Sbjct: 319 KRFDSEKSGDR-EVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKI 377
Query: 493 TIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG 552
P+ + R I Q++ +K+ ++ ++ LA T F GA + VC EA +IA R
Sbjct: 378 EFPLPNEEARANILQIHSRKMTVEDSVNW--AELARSTDEFGGAQLKAVCVEAGMIALRK 435
Query: 553 ENSQVTMEHFEAAIDRV 569
+S++ E++ AI V
Sbjct: 436 GHSKIGHENYVDAIAEV 452
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 466 (169.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 106/261 (40%), Positives = 156/261 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++N+ N+V + D+ GC + +I E V L++P+ ++ +G K PKG L+ GPPGTGKT+
Sbjct: 205 EENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + +PSIIFIDEID
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 435 XXXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
N E E ++QLL MDG + VVVIA TNRP+ +D AL R GRFDR++
Sbjct: 325 DKT-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVD 379
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
I PD +GR +I +++ K +KL + + +A+ T GF GADIA++C+EAA+ R +
Sbjct: 380 IGVPDAEGRLEILRIHTKNMKLADDVDL--EAIASETHGFVGADIASLCSEAAMQQIREK 437
Query: 554 NSQVTMEHFEAAID-RVIGGL 573
+ +E E ID V+ L
Sbjct: 438 MDLIDLE--EETIDTEVLNSL 456
Score = 420 (152.9 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 95/269 (35%), Positives = 143/269 (53%)
Query: 305 FNIGKAHVTKVDKNA-KN-KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKG 361
F +G ++ + + + +N V + D+ G D K E+ E V + + +P +Y+ G KG
Sbjct: 465 FALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKG 524
Query: 362 ALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 421
L GPPGTGKTLLAKA A E F+S+ G + + M+ G S +R++F +AR AP++
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTV 584
Query: 422 IFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKA 481
+F+DE+D + +NQLL EMDG V VI TNRPD +D A
Sbjct: 585 VFLDELDSIAKARGGSHGDAGGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 482 LLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANV 541
LLRPGR D+ I + PD R I Q L+ L EP +A +T GF+GAD++ +
Sbjct: 644 LLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPL--EPGLDLNEIAKITHGFSGADLSYI 701
Query: 542 CNEAALIAARGE-NSQVTMEHFEAAIDRV 569
+A A + +QV + + ++V
Sbjct: 702 VQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 466 (169.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 106/261 (40%), Positives = 156/261 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++N+ N+V + D+ GC + +I E V L++P+ ++ +G K PKG L+ GPPGTGKT+
Sbjct: 205 EENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + +PSIIFIDEID
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 435 XXXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
N E E ++QLL MDG + VVVIA TNRP+ +D AL R GRFDR++
Sbjct: 325 DKT-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVD 379
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
I PD +GR +I +++ K +KL + + +A+ T GF GADIA++C+EAA+ R +
Sbjct: 380 IGVPDAEGRLEILRIHTKNMKLADDVDL--EAIASETHGFVGADIASLCSEAAMQQIREK 437
Query: 554 NSQVTMEHFEAAID-RVIGGL 573
+ +E E ID V+ L
Sbjct: 438 MDLIDLE--EETIDTEVLNSL 456
Score = 420 (152.9 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 95/269 (35%), Positives = 143/269 (53%)
Query: 305 FNIGKAHVTKVDKNA-KN-KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKG 361
F +G ++ + + + +N V + D+ G D K E+ E V + + +P +Y+ G KG
Sbjct: 465 FALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKG 524
Query: 362 ALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 421
L GPPGTGKTLLAKA A E F+S+ G + + M+ G S +R++F +AR AP++
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTV 584
Query: 422 IFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKA 481
+F+DE+D + +NQLL EMDG V VI TNRPD +D A
Sbjct: 585 VFLDELDSIAKARGGSHGDAGGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 482 LLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANV 541
LLRPGR D+ I + PD R I Q L+ L EP +A +T GF+GAD++ +
Sbjct: 644 LLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPL--EPGLDLNEIAKITHGFSGADLSYI 701
Query: 542 CNEAALIAARGE-NSQVTMEHFEAAIDRV 569
+A A + +QV + + ++V
Sbjct: 702 VQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 468 (169.8 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 103/254 (40%), Positives = 151/254 (59%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHFLKNPRKYED----LGAKIPKGALLVGPPGTGKTLLAK 377
KV + DV G +E K ++ME V + P+K++D +G + P G L+ GPPG KTL+A+
Sbjct: 720 KVNWEDVGGQNEVKNQLMEAVEW---PQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMAR 776
Query: 378 ATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXX 437
A A E+ + FL++ G + +VG VR+LF +AR APSIIF DEID
Sbjct: 777 AVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKE 836
Query: 438 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKP 497
+R ++QLLVE+DG GV VIA TNRPD +D ALLRPGRFDR + + P
Sbjct: 837 NDGVSVSDR--VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPP 894
Query: 498 DIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARG--ENS 555
+ R+ I +++L+KI + + LA++T G+ GADI+ +C EAA+ A E
Sbjct: 895 NETDREAILKIHLRKIPCSSDICL--KELASITKGYTGADISLICREAAIAALEESLEME 952
Query: 556 QVTMEHFEAAIDRV 569
+++M H +AAI ++
Sbjct: 953 EISMRHLKAAISQI 966
Score = 338 (124.0 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 79/208 (37%), Positives = 112/208 (53%)
Query: 345 LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGP 404
+KN LG + KG L+ GPPGTGKT LA+ A SGV F S++G + + ++G
Sbjct: 406 IKN--SLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESE 463
Query: 405 SRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 464
+ +F+ A P+++FID++D + +TL L MDG T
Sbjct: 464 KALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEEL-SQRMVATLLNL---MDGISRTD 519
Query: 465 GVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYS- 523
GVVVIA TNRPD ++ AL RPGR DR+I I P R I + L+ ++ H S
Sbjct: 520 GVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMR--HSLSNIQV 577
Query: 524 QRLAALTPGFAGADIANVCNEAALIAAR 551
++LA T GF GAD++ +C EAA + R
Sbjct: 578 EQLAMATHGFVGADLSALCCEAAFVCLR 605
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 443 (161.0 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 98/253 (38%), Positives = 141/253 (55%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
++ + ++ K V + D+ GCD KQEI E V L + Y+ +G P+G LL GPPGT
Sbjct: 141 ISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGT 200
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDE+D
Sbjct: 201 GKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAI 260
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF T V VI TNR D LD ALLRPGR DR
Sbjct: 261 ATARFDAQTGADR-EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDR 319
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + +FQV K+ L E + + + A+IA +C EA + A
Sbjct: 320 KIEFPLPDRRQKRLVFQVCTSKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAV 377
Query: 551 RGENSQVTMEHFE 563
R + + FE
Sbjct: 378 RKNRYVILPKDFE 390
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 442 (160.7 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 98/258 (37%), Positives = 150/258 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ ++++E + + + K+E +G K PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF T V VIA TNRPD LD ALLR GR DR+I + P+ + R
Sbjct: 305 -EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + ++ + LA T F GA + VC EA +IA R +++ E F
Sbjct: 364 RILQIHSRKMNVHKDVNF--EELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFV 421
Query: 564 AAIDRVIGGLEKKNKVIS 581
I V L KK ++
Sbjct: 422 EGITSV---LSKKKSTLN 436
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 442 (160.7 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 442 (160.7 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 99/243 (40%), Positives = 144/243 (59%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 209
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 210 KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDR 269
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF T V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 270 -EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 328
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 329 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYM 386
Query: 564 AAI 566
I
Sbjct: 387 EGI 389
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 442 (160.7 bits), Expect = 3.0e-41, P = 3.0e-41
Identities = 98/258 (37%), Positives = 150/258 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ ++++E + + + K+E +G K PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF T V VIA TNRPD LD ALLR GR DR+I + P+ + R
Sbjct: 305 -EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + ++ + LA T F GA + VC EA +IA R +++ E F
Sbjct: 364 RILQIHSRKMNVHKDVNF--EELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFV 421
Query: 564 AAIDRVIGGLEKKNKVIS 581
I V L KK ++
Sbjct: 422 EGITSV---LSKKKSTLN 436
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 264 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 323 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 381 FMKAVRKVA---DSK-KLESKLDYKPV 403
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 136 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 195
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 196 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 256 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 315 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 372
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 373 FMKAVRKVA---DSK-KLESKLDYKPV 395
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 264 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 323 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 381 FMKAVRKVA---DSK-KLESKLDYKPV 403
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 122 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 181
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 182 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 241
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 242 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 301 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 358
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 359 FMKAVRKVA---DSK-KLESKLDYKPV 381
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 441 (160.3 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 104/267 (38%), Positives = 146/267 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G E +E+ E + L NP ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T V +I TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 264 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I +++ I E Y + + L+ GF GAD+ NVC EA + A R ++ V E
Sbjct: 323 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V + K K+ SKL+ + V
Sbjct: 381 FMKAVRKVA---DSK-KLESKLDYKPV 403
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 440 (159.9 bits), Expect = 5.0e-41, P = 5.0e-41
Identities = 98/261 (37%), Positives = 150/261 (57%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
+ V ++ + K + D+ G ++ QE++E + + + ++E LG + PKG LL GPP
Sbjct: 155 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPP 214
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTL+A+A A ++ FL ++G ++MF+G G VR+ FQ A++ AP IIFIDEID
Sbjct: 215 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEID 274
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGF + + VIA TNR DILD AL+R GR
Sbjct: 275 AIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRL 333
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P + R +I Q++ +K+ + H P + LA T F GA + VC EA ++
Sbjct: 334 DRKIEFPHPTEEARARILQIHSRKMNV-H-PDVNFEELARSTDDFNGAQLKAVCVEAGML 391
Query: 549 AARGENSQVTMEHFEAAIDRV 569
A R + ++V E F I +V
Sbjct: 392 ALRRDATEVNHEDFNEGIIQV 412
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 425 (154.7 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 92/243 (37%), Positives = 144/243 (59%)
Query: 325 FRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ GCD+ QE++E V + + ++ +LG PKG L+ GPPGTGKT++A+A A ++
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQT 235
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 295
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF + VIA TNR D+LD ALLR GR DR+I + P+ R
Sbjct: 296 -EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ ++ + ++ + LA T F GA VC EA +IA R + +++ E F
Sbjct: 355 RIMQIHSRKMNVNKDVNF--EELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 564 AAI 566
AI
Sbjct: 413 DAI 415
Score = 37 (18.1 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 751 EVLHQDDLLRVLGERPFKSSELTNY 775
E+LH+D + +L + K + L Y
Sbjct: 405 EILHEDFMDAILEVQAKKKASLNYY 429
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 425 (154.7 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 92/243 (37%), Positives = 144/243 (59%)
Query: 325 FRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ GCD+ QE++E V + + ++ +LG PKG L+ GPPGTGKT++A+A A ++
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQT 235
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 295
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF + VIA TNR D+LD ALLR GR DR+I + P+ R
Sbjct: 296 -EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARA 354
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ ++ + ++ + LA T F GA VC EA +IA R + +++ E F
Sbjct: 355 RIMQIHSRKMNVNKDVNF--EELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 564 AAI 566
AI
Sbjct: 413 DAI 415
Score = 37 (18.1 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 751 EVLHQDDLLRVLGERPFKSSELTNY 775
E+LH+D + +L + K + L Y
Sbjct: 405 EILHEDFMDAILEVQAKKKASLNYY 429
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 439 (159.6 bits), Expect = 6.4e-41, P = 6.4e-41
Identities = 101/261 (38%), Positives = 149/261 (57%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
+ V ++ + K + D+ G D+ +E++E V +K K+++LG K PKGAL+ GPP
Sbjct: 184 SRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPP 243
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTLLA+A A +SG FL ++ ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 244 GTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELD 303
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGFG+ V V+A TNR D LD ALLR GR
Sbjct: 304 AIGTKRFDSDKSGDR-EVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRL 362
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P + R+ + +++ +K+ D+ S + LA T F GA + V EA +I
Sbjct: 363 DRKIEFPLPSEEARESVLKIHARKLHCDNN-SVNWRELARSTDEFNGAQLKAVTVEAGMI 421
Query: 549 AARGENSQVTMEHFEAAIDRV 569
A R S + E F AI V
Sbjct: 422 ALRNGKSIIKHEDFVEAISEV 442
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 439 (159.6 bits), Expect = 6.4e-41, P = 6.4e-41
Identities = 101/262 (38%), Positives = 149/262 (56%)
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPG 369
+V K+DK A + Y D+ G + QEI E V L +P YE++G K PKG +L G PG
Sbjct: 178 NVMKLDK-APTESY-ADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPG 235
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF A + +PSI+FIDEID
Sbjct: 236 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDA 295
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA-GVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGF T+ + VI TNR LD AL+RPGR
Sbjct: 296 IGTKRYDAQSGAER-EIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRI 354
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I + PD + +IF ++ K+ L + + + L +GA+I + +EA L+
Sbjct: 355 DRKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEIKAIVSEAGLL 412
Query: 549 AARGENSQVTMEHFEAAIDRVI 570
A R +V M+ F A ++V+
Sbjct: 413 ALRERRMRVVMDDFRQAREKVL 434
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 102/279 (36%), Positives = 149/279 (53%)
Query: 304 IFNIGKAHVTKVDK--NAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPK 360
+FN+ ++ +DK N+ NKV + + G E +++ E V + NP Y+ +G K PK
Sbjct: 117 VFNM----ISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPK 172
Query: 361 GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 420
G LL GPPGTGKTLLA+A A F+ I S ++ ++G +R +F A++ P
Sbjct: 173 GVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPC 232
Query: 421 IIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDK 480
IIF+DEID E + TL +LL +DGF V +I TNRPD+LD
Sbjct: 233 IIFMDEIDAIGGRRFSQGTSADR-EIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDP 291
Query: 481 ALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIAN 540
AL+RPGR DR+I I P+ R +I +++ K+ + Y S + L GF GAD+ N
Sbjct: 292 ALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYES--VCRLCDGFNGADLRN 349
Query: 541 VCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
VC EA + A R V E F A ++ G + + K+
Sbjct: 350 VCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKI 388
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 131 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 190
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 191 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 250
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 251 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 309
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 310 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 367
Query: 564 AAI 566
I
Sbjct: 368 EGI 370
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 135 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 194
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 195 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 254
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 255 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 313
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 314 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 371
Query: 564 AAI 566
I
Sbjct: 372 EGI 374
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 305 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 364 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 564 AAI 566
I
Sbjct: 422 EGI 424
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 143 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 202
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 203 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 262
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 263 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 321
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 322 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 379
Query: 564 AAI 566
I
Sbjct: 380 EGI 382
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 305 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 364 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 564 AAI 566
I
Sbjct: 422 EGI 424
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 192 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 251
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 252 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 311
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 312 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 370
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 371 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 428
Query: 564 AAI 566
I
Sbjct: 429 EGI 431
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 102/279 (36%), Positives = 149/279 (53%)
Query: 304 IFNIGKAHVTKVDK--NAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPK 360
+FN+ ++ +DK N+ NKV + + G E +++ E V + NP Y+ +G K PK
Sbjct: 117 VFNM----ISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPK 172
Query: 361 GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 420
G LL GPPGTGKTLLA+A A F+ I S ++ ++G +R +F A++ P
Sbjct: 173 GVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPC 232
Query: 421 IIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDK 480
IIF+DEID E + TL +LL +DGF V +I TNRPD+LD
Sbjct: 233 IIFMDEIDAIGGRRFSQGTSADR-EIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDP 291
Query: 481 ALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIAN 540
AL+RPGR DR+I I P+ R +I +++ K+ + Y S + L GF GAD+ N
Sbjct: 292 ALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYES--VCRLCDGFNGADLRN 349
Query: 541 VCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKV 579
VC EA + A R V E F A ++ G + + K+
Sbjct: 350 VCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKI 388
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 308 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 366
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 367 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 564 AAI 566
I
Sbjct: 425 EGI 427
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 305 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 363
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 364 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 564 AAI 566
I
Sbjct: 422 EGI 424
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 98/243 (40%), Positives = 143/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 308 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 366
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA T F GA VC EA +IA R +++T E +
Sbjct: 367 RIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 564 AAI 566
I
Sbjct: 425 EGI 427
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 102/273 (37%), Positives = 153/273 (56%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
+ V ++ + K + DV G D+ +E++E + +K K++D+G + PKGAL+ GPP
Sbjct: 165 SRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTLLA+A A ++ FL ++ ++M++G G VR+ F A++ AP+IIFIDE+D
Sbjct: 225 GTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD 284
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGF + V V+A TNR D+LD ALLR GR
Sbjct: 285 AIGTKRFDSEKSGDR-EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRL 343
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P R QI Q++ +K+ D + ++ Q LA T F GA + V EA +I
Sbjct: 344 DRKIEFPLPSEDSRAQILQIHSRKMTTDDDINW--QELARSTDEFNGAQLKAVTVEAGMI 401
Query: 549 AARGENSQVTMEHFEAAIDRVIGGLEKKNKVIS 581
A R S V E F I V +K+K +S
Sbjct: 402 ALRNGQSSVKHEDFVEGISEVQA---RKSKSVS 431
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 435 (158.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 99/242 (40%), Positives = 135/242 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G D KQE+ E V L P YE +G + P G L+ GPPGTGKT+L KA A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ V F+ + GS+F++ ++G GP VR++F+ AR+ +PSIIFIDE+D
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + L +LL +MDGF + V VI TNR D LD ALLRPGR DR+I PD K
Sbjct: 255 DR-EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
+ IFQ + K+ + + + S T + ADIA + EA + A R +T
Sbjct: 314 KRLIFQTIISKMNVSSDVNIES--FVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAND 371
Query: 562 FE 563
FE
Sbjct: 372 FE 373
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 435 (158.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 99/242 (40%), Positives = 135/242 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G D KQE+ E V L P YE +G + P G L+ GPPGTGKT+L KA A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E+ V F+ + GS+F++ ++G GP VR++F+ AR+ +PSIIFIDE+D
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + L +LL +MDGF + V VI TNR D LD ALLRPGR DR+I PD K
Sbjct: 255 DR-EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
+ IFQ + K+ + + + S T + ADIA + EA + A R +T
Sbjct: 314 KRLIFQTIISKMNVSSDVNIES--FVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAND 371
Query: 562 FE 563
FE
Sbjct: 372 FE 373
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 453 (164.5 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 101/250 (40%), Positives = 149/250 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++N N+V + D+ GC + +I E V L++P+ ++ +G K P+G L+ GPPGTGKTL
Sbjct: 204 EENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTL 263
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + AP+IIFIDEID
Sbjct: 264 MARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR 323
Query: 435 XXXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
N E E ++QLL MDG + VVVIA TNRP+ +D AL R GRFDR++
Sbjct: 324 DKT-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVD 378
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
I PD GR ++ +++ K +KL + + LAA T G+ GADIA++C+EAA+ R +
Sbjct: 379 IGIPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCSEAAMQQIREK 436
Query: 554 NSQVTMEHFE 563
+ ++ E
Sbjct: 437 MDLIDLDEDE 446
Score = 419 (152.6 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 92/240 (38%), Positives = 129/240 (53%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + DV G DE K+E+ E V + + +P +Y G KG L GPPGTGKTLLAKA A
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E F+S+ G + + M+ G S +R++F +AR AP+++F+DE+D
Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDA 603
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
+ +NQLL EMDG V VI TNRPD +D A+LRPGR D+ I + PD
Sbjct: 604 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENA 662
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R I L+K L EP +A T GF+GAD+ + AA A + ++ + +H
Sbjct: 663 RLSILNAQLRKTPL--EPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK-DSIEAHRQH 719
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 431 (156.8 bits), Expect = 5.0e-40, P = 5.0e-40
Identities = 100/254 (39%), Positives = 138/254 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
+ F V G +E +E+ E + LKNP + +G K PKG LL GPPGTGKTLLA+A A
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
GV FL + S ++ ++G +R +F A++ P +IF+DEID
Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF +I TNRPD LD ALLRPGR DR+I I P+ G
Sbjct: 249 DR-EIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R +I +++L+K+ E Y + L LT G GAD+ NV EA IA + + V
Sbjct: 308 RMEILKIHLEKVSKQGEIDY--EALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSD 365
Query: 562 FEAAIDRVIGGLEK 575
+A R + L+K
Sbjct: 366 LMSAA-RKVADLKK 378
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 431 (156.8 bits), Expect = 5.0e-40, P = 5.0e-40
Identities = 99/259 (38%), Positives = 139/259 (53%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K+ + + DV G E +E+ E V L NP ++ +G PKG LL GPPGT
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEID
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + TL +LL ++DGF + V VI TNRPD LD ALLRPGR DR
Sbjct: 256 GGRRFSEGTSADR-EIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I I P+ + R +I +++ KI E + + + L+ GF+ AD+ NVC EA + A
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNKITKHGEIDF--EAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 551 RGENSQVTMEHFEAAIDRV 569
R E V E F A+ +V
Sbjct: 373 RAEREFVIDEDFMKAVRKV 391
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 431 (156.8 bits), Expect = 5.0e-40, P = 5.0e-40
Identities = 99/259 (38%), Positives = 139/259 (53%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
V K+ + + DV G E +E+ E V L NP ++ +G PKG LL GPPGT
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKTLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEID
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + TL +LL ++DGF + V VI TNRPD LD ALLRPGR DR
Sbjct: 256 GGRRFSEGTSADR-EIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I I P+ + R +I +++ KI E + + + L+ GF+ AD+ NVC EA + A
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNKITKHGEIDF--EAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 551 RGENSQVTMEHFEAAIDRV 569
R E V E F A+ +V
Sbjct: 373 RAEREFVIDEDFMKAVRKV 391
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 430 (156.4 bits), Expect = 6.5e-40, P = 6.5e-40
Identities = 100/261 (38%), Positives = 152/261 (58%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
A V ++ + + F D+ G D+ QE++E V + + K+++LG PKG +L GPP
Sbjct: 163 ARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPP 222
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTLLA+A A ++ FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 223 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 282
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL +++GF +TA + VIA TNR DIL ALLR GR
Sbjct: 283 AIGTKRFDSEKAGDR-EVQRTMLELLNQLNGFSSTADIKVIAATNRVDILP-ALLRSGRL 340
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P+ + R +I Q++ +K+ + ++ ++ + L+ T F GA VC EA +I
Sbjct: 341 DRKIEFPHPNEEARARIMQIHSRKMNVSNDVNF--EELSRSTDDFNGAQCKAVCVEAGMI 398
Query: 549 AARGENSQVTMEHFEAAIDRV 569
A R + VT E F AI V
Sbjct: 399 ALRRSANSVTHEDFMDAIMEV 419
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 430 (156.4 bits), Expect = 6.5e-40, P = 6.5e-40
Identities = 96/243 (39%), Positives = 142/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 180 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 239
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 240 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDR 299
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR D++I P+ + R
Sbjct: 300 -EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARA 358
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + +Y + LA F GA VC EA +IA R +++T E +
Sbjct: 359 RIMQIHSRKMNVSPDVNY--EELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYM 416
Query: 564 AAI 566
I
Sbjct: 417 EGI 419
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 415 (151.1 bits), Expect = 7.6e-40, Sum P(2) = 7.6e-40
Identities = 93/249 (37%), Positives = 131/249 (52%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
++ F + G E +E+ E + LKNP + +G K PKG LL GPPGTGKTLLAKA A
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
G F+ S ++ ++G +R +F A++ P IIF+DE+D
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
E + TL +LL +MDGF T +I TNRPD LD ALLR GR DR+I I P+
Sbjct: 288 ADR-EIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEA 346
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTME 560
GR +IF+++ K+ E + + ++ GF GADI NV EA A R + +
Sbjct: 347 GRLEIFKIHTSKVAKQGEFDF--EAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQN 404
Query: 561 HFEAAIDRV 569
A+ +V
Sbjct: 405 DLMKAVRKV 413
Score = 37 (18.1 bits), Expect = 7.6e-40, Sum P(2) = 7.6e-40
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 155 LSPREQQQISFQEFKNKLLE 174
+ P ++ +S +FK+KLLE
Sbjct: 40 IDPERERALS--KFKDKLLE 57
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 448 (162.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/255 (39%), Positives = 137/255 (53%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
KVY+ D+ G +E K ++ E + L+ + LG PKG LL GPPG KTL AKA A
Sbjct: 512 KVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALA 571
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
ESG+ FL++ G + +VG +R +F++AR APSIIF DEID
Sbjct: 572 TESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTS 631
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
N L LL E+DG GVV++A TNRPD +D ALLRPGR DR I + PD+
Sbjct: 632 AANH----VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVN 687
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN--SQVT 558
R +I + KK + E LA T G++GA++ +C EA L A + ++V
Sbjct: 688 ARLEILKKCTKKFNTE-ESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE 746
Query: 559 MEHFEAAIDRVIGGL 573
+ HFE A + G+
Sbjct: 747 LRHFEKAFKGIARGI 761
Score = 371 (135.7 bits), Expect = 5.6e-31, P = 5.6e-31
Identities = 90/274 (32%), Positives = 133/274 (48%)
Query: 304 IFNIGKAHVTKVDKNAKNKVY-------FRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLG 355
IF G H+T + N+ Y + V G D+ + + + L P + G
Sbjct: 216 IFRKGSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFG 275
Query: 356 AKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEAR 415
P+G LL GPPGTGKT+L + A S L+I+G + ++G + +R++F EAR
Sbjct: 276 VSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEAR 335
Query: 416 QCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRP 475
+ PSIIFIDEID +TL L MDG G VVVIA TNRP
Sbjct: 336 KYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATL---LTLMDGMGAAGKVVVIAATNRP 392
Query: 476 DILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHE--PSYYSQRLAALTPGF 533
+ +D AL RPGRFD+++ I PD+ R I ++ D S + +A+ T G+
Sbjct: 393 NSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGY 452
Query: 534 AGADIANVCNEAAL-IAARGENSQVTMEHFEAAI 566
GAD+ +C E+ + RG + ++ F +
Sbjct: 453 VGADLTALCRESVMKTIQRGLGTDANIDKFSLKV 486
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 150 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 209
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 210 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 269
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 270 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 328
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 329 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 386
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 387 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 414
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/269 (37%), Positives = 147/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALLRPGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + IF K+ L E + A +GADI ++C E+ ++A
Sbjct: 330 KIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 94/261 (36%), Positives = 151/261 (57%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
+ V ++ + K + D+ G ++ QE++E + + + ++E LG + PKG LL GPP
Sbjct: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPP 213
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTL+A+A A ++ FL ++G ++MF+G G VR+ F A++ +P IIFIDEID
Sbjct: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEID 273
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGF + + VIA TNR DILD AL+R GR
Sbjct: 274 AIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P + R +I Q++ +K+ ++ + ++ + LA T F GA + VC EA ++
Sbjct: 333 DRKIEFPHPTEEARGRILQIHSRKMNVNADVNF--EELARSTDDFNGAQLKAVCVEAGML 390
Query: 549 AARGENSQVTMEHFEAAIDRV 569
A R + ++V E F I +V
Sbjct: 391 ALRRDATEVNHEDFNEGIIQV 411
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 448 (162.8 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 101/254 (39%), Positives = 151/254 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++N N+V + D+ GC + +I E V L++P+ ++ +G K P+G LL GPPGTGKTL
Sbjct: 212 EENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTL 271
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + +P+IIFIDEID
Sbjct: 272 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR 331
Query: 435 XXXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++
Sbjct: 332 EKT-----NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVD 386
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
I PD GR +I Q++ K +KL + +++AA T G+ G+D+A +C+EAA+ R +
Sbjct: 387 IGIPDPTGRLEILQIHTKNMKLGDDVDL--EQIAAETHGYVGSDVAALCSEAAMQQIREK 444
Query: 554 NSQVTMEHFEAAID 567
+ ++ E ID
Sbjct: 445 MDLIDLD--EDTID 456
Score = 405 (147.6 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 88/230 (38%), Positives = 124/230 (53%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G DE KQ++ E V + + +P K+ G +G L GPPGTGKT+LAKA A
Sbjct: 493 VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E F+S+ G + + M+ G S +R++F +AR AP I+F+DE+D
Sbjct: 553 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDA 612
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
+ +NQLL EMDG + V VI TNRP+ LD AL RPGR D I + PD G
Sbjct: 613 GGAS-DRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG 671
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 551
R I + L+K + + Q +A T GF+GAD+ + A IA +
Sbjct: 672 RLSILKAQLRKTPVSDDVDL--QYIANKTHGFSGADLGFITQRAVKIAIK 719
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 411 (149.7 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 91/222 (40%), Positives = 131/222 (59%)
Query: 345 LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGP 404
+ + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++ FL ++G ++MF+G G
Sbjct: 223 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 282
Query: 405 SRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 464
VR+ F A++ APSIIFIDE+D E + T+ +LL ++DGF
Sbjct: 283 KLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNT 341
Query: 465 GVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQ 524
V VIA TNR DILD ALLR GR DR+I P+ + R +I Q++ +K+ + + +Y +
Sbjct: 342 QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--E 399
Query: 525 RLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAI 566
LA T F GA VC EA +IA R +++T E + I
Sbjct: 400 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGI 441
Score = 39 (18.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 325 FRDVAGCDEAKQEIMEFVH 343
+ D+ G D+ QE+ E H
Sbjct: 186 YSDIGGLDKQIQEVREARH 204
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 426 (155.0 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/241 (38%), Positives = 132/241 (54%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
+V + D+ G ++ K+E+ E V + +++P K+ G KG L GPPG GKTLLAKA A
Sbjct: 205 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 264
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
E F+SI G + + M+ G + VR +F +ARQ AP ++F DE+D
Sbjct: 265 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 324
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ +NQ+L EMDG T V +I TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 325 GGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 383
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE-NSQVTM 559
R I + L+K + + LA +T GF+GAD+ +C A +A R S++
Sbjct: 384 SRVAILKANLRKSPVAKDVDL--DFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRR 441
Query: 560 E 560
E
Sbjct: 442 E 442
Score = 275 (101.9 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 67/170 (39%), Positives = 95/170 (55%)
Query: 391 SGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXNDERESTL 450
SG + M G S +R F+EA + AP+IIFIDE+D ER +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV---ERR-IV 57
Query: 451 NQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQVYL 510
+QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I PD GR +I Q++
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 117
Query: 511 KKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTME 560
K +KL + +++ T G GAD+A +C+EAAL A R + + +E
Sbjct: 118 KNMKLADDVDL--EQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLE 165
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 445 (161.7 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 103/257 (40%), Positives = 144/257 (56%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
KV++ D+ G +E K++++E V L+ +++LG PKG LL GPPG KTL AKA A
Sbjct: 495 KVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALA 554
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
ESG+ FL++ G + +VG +R +F++AR +PSIIF DEID
Sbjct: 555 TESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSST 614
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ L LL E+DG GVV++ TN+P +D ALLRPGR DR I + PD
Sbjct: 615 TA---ASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYD 671
Query: 501 GRDQIFQVYLKKIKLDH-EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQ--- 556
R QI Q +K L + S Q+LA LT G +GA++ +C EA L AA EN +
Sbjct: 672 ARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGL-AAIMENKEATT 730
Query: 557 VTMEHFEAAIDRVIGGL 573
VT +HFE A+ + G+
Sbjct: 731 VTNKHFEHALKGISRGI 747
Score = 359 (131.4 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 85/263 (32%), Positives = 136/263 (51%)
Query: 318 NAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLA 376
N ++ + V G + + + + L NP + D G P+G LL GPPGTGKT+L
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 377 KATAGE-SGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXX 435
+ A + L+I+G + ++G + +R++F EA++ PSIIF+DEID
Sbjct: 281 RCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRT 340
Query: 436 XXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ E ES + QLL MDG G +VVI TNRP+ +D AL RPGRFD+++ I
Sbjct: 341 SDD----SGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEI 396
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAAL---TPGFAGADIANVCNEAALIAA- 550
PD++ R++I K+ + + + +A++ T G+ GAD+ +C E+ + A
Sbjct: 397 GIPDVEAREEILTKQFAKMNSE-KCQITKEEIASIASKTHGYVGADLTALCRESVMKAIN 455
Query: 551 RGENSQVTMEHFEAAIDRVIGGL 573
RG + + +D V L
Sbjct: 456 RGLTVGIPQTAIKVTVDDVYHAL 478
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 424 (154.3 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 96/243 (39%), Positives = 142/243 (58%)
Query: 325 FRDVAGCDEAKQEIMEFVHFLKNPR-KYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 383
+ D+ G D+ QE++E + N + K+E+LG + PKG L+ GPPGTGKTLLA+A A ++
Sbjct: 173 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 232
Query: 384 GVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXXXN 443
FL ++G ++MF+G G VR+ F A++ APSIIFIDE+D
Sbjct: 233 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 292
Query: 444 DERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 503
E + T+ +LL ++DGF V VIA TNR DILD ALLR GR DR+I P+ + R
Sbjct: 293 -EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARA 351
Query: 504 QIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFE 563
+I Q++ +K+ + + ++ + LA T F GA VC EA +IA R +++ E +
Sbjct: 352 RIMQIHSRKMNVCPDVNF--EELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYM 409
Query: 564 AAI 566
I
Sbjct: 410 EGI 412
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 444 (161.4 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 96/246 (39%), Positives = 143/246 (58%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++ + N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 253
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+E + AP+IIFIDE+D
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDD 313
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
+ ++QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I
Sbjct: 314 CFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 373
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
PD GR +I Q++ K +KL + +++A T G GAD+A +C+EAAL A R +
Sbjct: 374 GIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKM 431
Query: 555 SQVTME 560
+ +E
Sbjct: 432 DLIDLE 437
Score = 426 (155.0 bits), Expect = 4.2e-37, P = 4.2e-37
Identities = 92/241 (38%), Positives = 132/241 (54%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
+V + D+ G ++ K+E+ E V + +++P K+ G KG L GPPG GKTLLAKA A
Sbjct: 477 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
E F+SI G + + M+ G + VR +F +ARQ AP ++F DE+D
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 596
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ +NQ+L EMDG T V +I TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 597 GGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 655
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE-NSQVTM 559
R I + L+K + + LA +T GF+GAD+ +C A +A R S++
Sbjct: 656 SRVAILKANLRKSPVAKDVDL--DFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRR 713
Query: 560 E 560
E
Sbjct: 714 E 714
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 423 (154.0 bits), Expect = 3.9e-39, P = 3.9e-39
Identities = 92/251 (36%), Positives = 134/251 (53%)
Query: 320 KNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKA 378
+ ++ F + G E +E+ E + LKNP ++ +G K PKG LL GPPGTGKTLLAKA
Sbjct: 175 QGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKA 234
Query: 379 TAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXX 438
A G F+ S ++ ++G +R +F A++ P IIF+DE+D
Sbjct: 235 VAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEG 294
Query: 439 XXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPD 498
E + TL +LL +MDGF +I TNRPD LD ALLRPGR DR++ I P+
Sbjct: 295 TSADR-EIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
Query: 499 IKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVT 558
GR +IF+++ K+K E + + ++ GF GADI N EA A R + +
Sbjct: 354 EAGRLEIFKIHTAKVKKTGEFDF--EAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHIN 411
Query: 559 MEHFEAAIDRV 569
+ A+ +V
Sbjct: 412 PDDLMKAVRKV 422
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 422 (153.6 bits), Expect = 5.0e-39, P = 5.0e-39
Identities = 99/269 (36%), Positives = 146/269 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
+ + + K V + D+ G D KQE+ E V L + Y+ +G P+G L+ GPPG
Sbjct: 151 IMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 210
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 270
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF V VI TNR D LD ALL PGR DR
Sbjct: 271 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDR 329
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + +F K+ L E + A +GADI ++C EA ++A
Sbjct: 330 KIEFPLPDRRQKRLVFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQEAGMLAV 387
Query: 551 RGENSQVTM-EHFEAAIDRVIGGLEKKNK 578
R EN + + + FE A VI E++++
Sbjct: 388 R-ENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 442 (160.7 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 100/246 (40%), Positives = 146/246 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++ + N + + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL
Sbjct: 196 EEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 255
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + AP+IIFIDE+D
Sbjct: 256 VARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 315
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
ER ++QLL MDG A VVV+A TNRP+ +D AL R GRFDR+I I
Sbjct: 316 EKTHGEV---ERR-IVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDI 371
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
PD GR +I Q++ K +KL + ++++A T G GAD+A +C+EAAL A R +
Sbjct: 372 GIPDSTGRLEILQIHTKNMKLSEDVDL--EQISAETHGHVGADLAALCSEAALQAIRKKM 429
Query: 555 SQVTME 560
+ + +E
Sbjct: 430 TLIDLE 435
Score = 420 (152.9 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 91/232 (39%), Positives = 128/232 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G DE K+E+ E V + ++ P K+ G +G L GPPG GKTLLAKA A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E F+SI G + + M+ G + VR++F +ARQ AP I+F DE+D
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
+ +NQ+L EMDG V +I TNRPDI+D A+LRPGR D+ I I PD+
Sbjct: 596 GG-AADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPS 654
Query: 502 RDQIFQVYLKK--IKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 551
R I + L+K + D + Y S+ +T GF+GAD+ +C A +A R
Sbjct: 655 RTAILRANLRKSPVAKDVDLMYLSK----ITEGFSGADLTEICQRACKLAIR 702
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 442 (160.7 bits), Expect = 6.2e-39, P = 6.2e-39
Identities = 96/239 (40%), Positives = 130/239 (54%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G + K+E+ E V + +++P K+E G KG L GPPG GKTLLAKA A
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E F+S+ G + + M+ G + VR +F +ARQ AP ++F DE+D
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
+ LNQLL EMDG V +I TNRPDI+D ALLRPGR D+ I I PD
Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTME 560
R IF+ L+K + + + LA T GF+GADI +C A A R EN + +E
Sbjct: 657 RLNIFKAALRKSPIAKDVDIGA--LAKYTQGFSGADITEICQRACKYAIR-ENIEKDIE 712
Score = 434 (157.8 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 106/269 (39%), Positives = 154/269 (57%)
Query: 304 IFNIGKAHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGA 362
IF G+ V + D+ + V + DV G + +I E V L++P+ ++ +G K PKG
Sbjct: 186 IFCEGEP-VKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 244
Query: 363 LLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSII 422
LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSII
Sbjct: 245 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 304
Query: 423 FIDEIDXXXXXXXXXXXXXXNDERESTL-NQLLVEMDGFGTTAGVVVIAGTNRPDILDKA 481
FIDEID N E E + +QLL MDG + A V+V+ TNRP+ +D A
Sbjct: 305 FIDEIDSIAPKREKT-----NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 359
Query: 482 LLRPGRFDRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANV 541
L R GRFDR+I I PD GR ++ +++ K +KL + +R++ T G+ GAD+A +
Sbjct: 360 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAAL 417
Query: 542 CNEAALIAARGENSQVTMEHFEAAIDRVI 570
C EAAL R + + +E + +ID I
Sbjct: 418 CTEAALQCIREKMDVIDLE--DDSIDAEI 444
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 421 (153.3 bits), Expect = 6.5e-39, P = 6.5e-39
Identities = 97/254 (38%), Positives = 138/254 (54%)
Query: 311 HVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPG 369
H+ D+ + D+ G D KQE+ E V L + Y+ +G P+G LL GPPG
Sbjct: 137 HLLGADEKPSES--YSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPG 194
Query: 370 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDX 429
TGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ AR+ +P+IIFIDEID
Sbjct: 195 TGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDA 254
Query: 430 XXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFD 489
E + L +LL +MDGF + V VI TNR D LD ALLRPGR D
Sbjct: 255 IATKRFDAQTGADR-EVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLD 313
Query: 490 RQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIA 549
R+I PD + + IFQV K+ L E + + +GA+I ++C EA + A
Sbjct: 314 RKIEFPLPDRRQKRLIFQVITSKMNLSDEVDL--EDYVSRPDKLSGAEIQSICQEAGMHA 371
Query: 550 ARGENSQVTMEHFE 563
R + + FE
Sbjct: 372 IRKNRYVILPKDFE 385
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 421 (153.3 bits), Expect = 6.5e-39, P = 6.5e-39
Identities = 95/272 (34%), Positives = 153/272 (56%)
Query: 310 AHVTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPP 368
+ V ++ + K + D+ G D+ QE++E V + + ++E +G K PKG L+ GPP
Sbjct: 152 SRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPP 211
Query: 369 GTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 428
GTGKTLLA+A A ++ +L ++G ++MF+G G VR+ F A++ P+IIFIDE+D
Sbjct: 212 GTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELD 271
Query: 429 XXXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRF 488
E + T+ +LL ++DGF + A + VIA TNR DILD ALLR GR
Sbjct: 272 AIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRL 330
Query: 489 DRQITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 548
DR+I P+ + R I Q++ +K+ + + ++ LA + F GA + VC EA +I
Sbjct: 331 DRKIEFPLPNEEARAHILQIHSRKMNVSADVNF--DELARSSEDFNGAQLKAVCVEAGMI 388
Query: 549 AARGENSQVTMEHFEAAIDRVIGGLEKKNKVI 580
A R +++ F ++ + + KK K +
Sbjct: 389 ALRRGGTELIHNDF---VEGCVEVMAKKKKTL 417
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 421 (153.3 bits), Expect = 6.5e-39, P = 6.5e-39
Identities = 99/267 (37%), Positives = 140/267 (52%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + ++ G +E+ E V L P + +G K PKG LL GPPGTGKTLLA+A A
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
FL + S ++ ++G +R +F AR P +IF+DEID
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF T + V +I TNRPD+LD ALLRPGR DR+I I P+ G
Sbjct: 254 DR-EIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAG 312
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R + +++ I + Y + +A L GF AD+ NVC EA + A R E V E
Sbjct: 313 RVDVLKIHAANITKHGDVDY--EAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEED 370
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ + ++ K+ KL+ + V
Sbjct: 371 FMKAVRKC----QEAKKLEGKLDYQKV 393
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 421 (153.3 bits), Expect = 6.5e-39, P = 6.5e-39
Identities = 97/254 (38%), Positives = 139/254 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
++ + + K V + D+ G D KQEI E V L + Y+ +G P+G L+ GPPG
Sbjct: 146 ISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 205
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+IIFIDEID
Sbjct: 206 GKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAI 265
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF T V VI TNR D LD ALLRPGR DR
Sbjct: 266 ATKRFDAQTGADR-EVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 324
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I PD + + +F K+ L + + A +GADI +C EA + A
Sbjct: 325 KIEFPLPDRRQKRLVFSTITSKMNLSEDVDL--EEFVARPDKISGADINAICQEAGMHAV 382
Query: 551 RGENSQVTM-EHFE 563
R EN + + + FE
Sbjct: 383 R-ENRYIVLAKDFE 395
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 421 (153.3 bits), Expect = 6.5e-39, P = 6.5e-39
Identities = 95/253 (37%), Positives = 138/253 (54%)
Query: 312 VTKVDKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGT 370
++ + + K + + D+ G D KQEI E V L + + Y+ +G P+G LL GPPG
Sbjct: 138 ISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGC 197
Query: 371 GKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXX 430
GKT+LAKA A + F+ + GS+F++ ++G GP VR+LF+ A+Q +PSIIFIDEID
Sbjct: 198 GKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAI 257
Query: 431 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDR 490
E + L +LL +MDGF T + VI TNR D LD ALLRPGR DR
Sbjct: 258 ATKRFDAQTGADR-EVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDR 316
Query: 491 QITIDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAA 550
+I + PD + + +F K+ + + + + A + ADI +C EA + A
Sbjct: 317 KIELPLPDRRQKRLVFTTITSKMNVGEDVDL--EDIIARPDKISNADINAICQEAGMHAV 374
Query: 551 RGENSQVTMEHFE 563
R V + FE
Sbjct: 375 RENRYVVNAKDFE 387
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 441 (160.3 bits), Expect = 8.7e-39, P = 8.7e-39
Identities = 99/254 (38%), Positives = 150/254 (59%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++N N+V + D+ GC + +I E V L++P+ ++ +G K P+G L+ GPPGTGKTL
Sbjct: 215 EENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 274
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + +P+IIFIDEID
Sbjct: 275 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR 334
Query: 435 XXXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQIT 493
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++
Sbjct: 335 EKT-----NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVD 389
Query: 494 IDKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGE 553
I PD GR +I ++ K +KL + + +AA T G+ G+D+A++C+EAA+ R +
Sbjct: 390 IGIPDPTGRLEILSIHTKNMKLGEDVDL--ETIAAETHGYVGSDLASLCSEAAMQQIREK 447
Query: 554 NSQVTMEHFEAAID 567
+ ++ E ID
Sbjct: 448 MDLIDLD--EDTID 459
Score = 403 (146.9 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 83/230 (36%), Positives = 128/230 (55%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + D+ G +E K+E++E V + + +P K++ G +G L GPPGTGKT+LAKA A
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
E F+S+ G + + M+ G S +R++F +AR AP ++F+DE+D
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDA 615
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
+ +NQLL EMDG + V VI TNRP+ LD AL+RPGR D + + PD
Sbjct: 616 GGAS-DRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS 674
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 551
R+ I + L+K + + + +A+ T GF+GAD+ V A +A +
Sbjct: 675 REGILKAQLRKTPVASDVDI--EFIASKTHGFSGADLGFVTQRAVKLAIK 722
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 419 (152.6 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 101/267 (37%), Positives = 140/267 (52%)
Query: 323 VYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATAG 381
V + + G + +E+ E + L NP + +G PKG LL GPPGTGKTLLA+A A
Sbjct: 138 VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVAS 197
Query: 382 ESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXXX 441
+ FL + S ++ ++G +R +F AR P IIF+DEID
Sbjct: 198 QLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 257
Query: 442 XNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 501
E + TL +LL +MDGF + V +I TNRPD LD ALLRPGR DR+I I P+ +
Sbjct: 258 DR-EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQA 316
Query: 502 RDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEH 561
R +I +++ KI E Y + + L+ F GAD+ NVC EA L A R E V
Sbjct: 317 RLEILKIHALKIAKHGEIDY--EAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGD 374
Query: 562 FEAAIDRVIGGLEKKNKVISKLERRTV 588
F A+ +V K+ SKL+ + V
Sbjct: 375 FMKAVRKV----SDNKKLESKLDYKPV 397
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 439 (159.6 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 99/246 (40%), Positives = 145/246 (58%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++ + N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 253
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + AP+IIFIDE+D
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 313
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
ER ++QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I
Sbjct: 314 EKTHGEV---ERR-IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
PD GR +I Q++ K +KL + +++A T G GAD+A +C+EAAL A R +
Sbjct: 370 GIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 555 SQVTME 560
+ +E
Sbjct: 428 DLIDLE 433
Score = 425 (154.7 bits), Expect = 5.3e-37, P = 5.3e-37
Identities = 90/231 (38%), Positives = 128/231 (55%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
+V + D+ G ++ K+E+ E V + +++P K+ G KG L GPPG GKTLLAKA A
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
E F+SI G + + M+ G + VR +F +ARQ AP ++F DE+D
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 592
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ +NQ+L EMDG T V +I TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 593 GGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 551
R I + L+K + + LA +T GF+GAD+ +C A +A R
Sbjct: 652 SRIAILKANLRKSPVAKDVDL--DFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 439 (159.6 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 99/246 (40%), Positives = 145/246 (58%)
Query: 316 DKNAKNKVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTL 374
++ + N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL
Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 253
Query: 375 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXX 434
+A+A A E+G F I+G + M G S +R F+EA + AP+IIFIDE+D
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR 313
Query: 435 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITI 494
ER ++QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I
Sbjct: 314 EKTHGEV---ERR-IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 495 DKPDIKGRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEN 554
PD GR +I Q++ K +KL + +++A T G GAD+A +C+EAAL A R +
Sbjct: 370 GIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 555 SQVTME 560
+ +E
Sbjct: 428 DLIDLE 433
Score = 419 (152.6 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 89/231 (38%), Positives = 127/231 (54%)
Query: 322 KVYFRDVAGCDEAKQEIMEFVHF-LKNPRKYEDLGAKIPKGALLVGPPGTGKTLLAKATA 380
+V + D+ G ++ K+E+ E V + +++P K+ G KG L GPPG GKTLLAKA A
Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 381 GESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDXXXXXXXXXXXX 440
E F+SI G + + M+ G + VR +F +ARQ AP ++F DE+D
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 592
Query: 441 XXNDERESTLNQLLVEMDGFGTTAGVVVIAGTNRPDILDKALLRPGRFDRQITIDKPDIK 500
+ +NQ+L EMDG V +I TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 593 GGG-AADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651
Query: 501 GRDQIFQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 551
R I + L+K + + LA +T GF+GAD+ +C A +A R
Sbjct: 652 SRMAILKANLRKSPVAKDVDV--DFLAKMTNGFSGADLTEICQRACKLAIR 700
WARNING: HSPs involving 458 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 811 692 0.00081 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 708
No. of states in DFA: 615 (65 KB)
Total size of DFA: 340 KB (2172 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.38u 0.12s 58.50t Elapsed: 00:00:03
Total cpu time: 58.44u 0.13s 58.57t Elapsed: 00:00:03
Start: Mon May 20 15:23:51 2013 End: Mon May 20 15:23:54 2013
WARNINGS ISSUED: 2