BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047693
MGLKSLVYAVILVAAMGALMADAQGGVIGTLLGLIHIEGTLYYTVNGKIGDLGQATPVFP
NAKVELQCGGNVNSTAVTSESGSFSIVLDPVQIVVSSLLNDCCLVLKTPLATCNSNLPSA
GDLFSPLTIVGNTLLGILLKP

High Scoring Gene Products

Symbol, full name Information P value
AT3G16660 protein from Arabidopsis thaliana 6.6e-26
AT3G16670 protein from Arabidopsis thaliana 4.6e-18
AT5G05020 protein from Arabidopsis thaliana 6.1e-07
AT2G41390 protein from Arabidopsis thaliana 1.1e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047693
        (141 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089313 - symbol:AT3G16660 "AT3G16660" species...   293  6.6e-26   1
TAIR|locus:2089328 - symbol:AT3G16670 "AT3G16670" species...   219  4.6e-18   1
TAIR|locus:2175284 - symbol:AT5G05020 species:3702 "Arabi...   114  6.1e-07   1
TAIR|locus:2040262 - symbol:AT2G41390 "AT2G41390" species...   102  1.1e-05   1


>TAIR|locus:2089313 [details] [associations]
            symbol:AT3G16660 "AT3G16660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR006041
            Pfam:PF01190 EMBL:BT009651 EMBL:AK117310 IPI:IPI00529614
            RefSeq:NP_188288.2 UniGene:At.38862 PRIDE:Q8GYY6
            EnsemblPlants:AT3G16660.1 GeneID:820918 KEGG:ath:AT3G16660
            eggNOG:NOG315800 OMA:ISIIPAG ProtClustDB:CLSN2718605
            Genevestigator:Q8GYY6 Uniprot:Q8GYY6
        Length = 180

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 63/139 (45%), Positives = 94/139 (67%)

Query:     2 GLKSLVYAVILVAAMGALMADAQGGVIGTLLGLIHIEGTLYYTVNGKIGDLGQATPVFPN 61
             GL  L+    LV  +G L+    GG++G +L L++I G ++ ++NG     G +TP F N
Sbjct:    36 GLGGLIGG--LVGGLGGLV----GGLVGGILNLVNINGVVFCSLNG--APSGTSTPAFAN 87

Query:    62 AKVELQCG--GNVNSTAVTSESGSFSIVLDPVQIVVSSLLNDCCLVLKTPLATCNSNLPS 119
             A VELQCG    V STA T+ +G FS+  D +Q+++S+LL+DC +V+ TPL+TCN+NLPS
Sbjct:    88 AGVELQCGRQNRVVSTATTNAAGLFSLPTDSIQMLLSTLLSDCRVVVTTPLSTCNANLPS 147

Query:   120 AGDLFSPLTIVGNTLLGIL 138
              G+L S L ++GN+L G+L
Sbjct:   148 VGNLVSRLAMIGNSLTGLL 166


>TAIR|locus:2089328 [details] [associations]
            symbol:AT3G16670 "AT3G16670" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006979 "response to
            oxidative stress" evidence=IMP] EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006979 EMBL:AB022217
            InterPro:IPR006041 Pfam:PF01190 ProtClustDB:CLSN2718605
            EMBL:AY102103 EMBL:AY143804 IPI:IPI00533067 RefSeq:NP_188289.1
            UniGene:At.43368 PRIDE:Q9LUR6 EnsemblPlants:AT3G16670.1
            GeneID:820919 KEGG:ath:AT3G16670 TAIR:At3g16670 eggNOG:NOG293600
            HOGENOM:HOG000006238 InParanoid:Q9LUR6 OMA:NDCRIVV PhylomeDB:Q9LUR6
            Genevestigator:Q9LUR6 Uniprot:Q9LUR6
        Length = 154

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 51/139 (36%), Positives = 87/139 (62%)

Query:     4 KSLVYAVILVAAMGAL-MADAQGGVIGTLLGLIHIEGTLYYTVNGKIGDLGQATPVFPNA 62
             K + ++++L+  +    MA+AQ G+ G  + +I+  G L+ T+NG   + G   P F NA
Sbjct:     6 KHITFSLVLLCLIVVSPMANAQSGLGGINVPIIN--GVLFCTINGAPLN-GTPAPAFANA 62

Query:    63 KVELQCGGNVN---STAVTSESGSFSIVLDPVQIVVSSLLNDCCLVLKTPLATCNSNLPS 119
              V+LQCG N+N   +  +T+ +G F+   + +QI + +LLNDC +V+ TP ++C++ LPS
Sbjct:    63 VVQLQCG-NLNRVVAETITNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLPS 121

Query:   120 AGDLFSPLTIVGNTLLGIL 138
              G L S L +VG+ + G+L
Sbjct:   122 TGQLISQLNLVGSIVSGLL 140


>TAIR|locus:2175284 [details] [associations]
            symbol:AT5G05020 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB005245 InterPro:IPR006041
            Pfam:PF01190 HOGENOM:HOG000142239 ProtClustDB:CLSN2686456
            EMBL:BT012522 EMBL:BT014822 IPI:IPI00537553 RefSeq:NP_196121.1
            UniGene:At.23202 PaxDb:Q9FF72 PRIDE:Q9FF72
            EnsemblPlants:AT5G05020.1 GeneID:830384 KEGG:ath:AT5G05020
            TAIR:At5g05020 PhylomeDB:Q9FF72 Genevestigator:Q9FF72
            Uniprot:Q9FF72
        Length = 154

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 40/132 (30%), Positives = 64/132 (48%)

Query:     3 LKSLVYAVILVAAMGALMADAQG-GVIGTLLGLIHIEGTLYYTVNGKIGDLGQATPVFPN 61
             + S++  +++  AM  L   + G  + G  LG   I G L   ++G       A PV   
Sbjct:     8 ITSILLILLMAIAMALLSTSSHGLSIAGLSLGQGQIYGVLRCNISGD----PNAPPV-SG 62

Query:    62 AKVELQCGGNVNST---AVTSESGSFSIVLDPVQIVVSSLLNDCCLVLKTPLATCNSNLP 118
             A V L+C G+ N+T   AVT   G+F ++L  VQ V+ S  + C L+   P   C+  +P
Sbjct:    63 APVYLKCDGS-NTTIADAVTKPDGTFRVLLSAVQTVLISP-SSCYLLANLPGGNCSIYVP 120

Query:   119 SAGDLFSPLTIV 130
               G L +  T++
Sbjct:   121 D-GALTATFTLL 131


>TAIR|locus:2040262 [details] [associations]
            symbol:AT2G41390 "AT2G41390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR006041 Pfam:PF01190
            IPI:IPI00529824 RefSeq:NP_181670.2 UniGene:At.42839
            UniGene:At.66394 EnsemblPlants:AT2G41390.1 GeneID:818737
            KEGG:ath:AT2G41390 OMA:KCEIKAN Uniprot:F4IK06
        Length = 148

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 41/142 (28%), Positives = 72/142 (50%)

Query:     4 KSLVY--AVILVAAMGALMADAQGGVIGTLLGLIHIEGTLYYTVNGKIGDLGQATPVFPN 61
             KS V+  +++L+A++ ++    Q  + G  +  + I G +Y +++G       A PV  N
Sbjct:     3 KSNVFLLSILLMASLFSISHAFQ--LWGYAIDRVSIRGVVYCSLDGD----PSAPPV-SN 55

Query:    62 AKVELQCGGNVNST---AVTSESGSFSIVLDPVQIVVSSLLNDCCLVLKTPLATCNSNLP 118
             A V ++C G  NST   AVT++ G F++V +P      +  N C + +  P  +C    P
Sbjct:    56 ATVYIECPGGSNSTLAQAVTNQVGVFTLVFNPGNTTFVNP-NKCDIKVNLPTNSCFI-YP 113

Query:   119 SAGDLFSPLTIVGNTLLGILLK 140
               G L + +    N LL I+L+
Sbjct:   114 PGGVLIASV----NELLSIILQ 131


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 22  0.45    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  517 (55 KB)
  Total size of DFA:  107 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.18u 0.09s 14.27t   Elapsed:  00:00:00
  Total cpu time:  14.18u 0.09s 14.27t   Elapsed:  00:00:00
  Start:  Mon May 20 15:35:42 2013   End:  Mon May 20 15:35:42 2013

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