BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047705
(585 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 402 RTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK-SFDVE 460
+ FS EL A+D FS N++GRGGFG VYK RL DG VAVK + + + F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE---KHLYSTNCILDIFQRLNIM 517
E++ HRNL+++ C + LV YM GS+ + + LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ A L YLH C +IH D+K +N+LLD+ A + DFG+AKL+ +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 204
Query: 578 ATIGYMAP 585
TIG++AP
Sbjct: 205 GTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 402 RTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK-SFDVE 460
+ FS EL A+D F N++GRGGFG VYK RL DG VAVK + + + F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---STNCILDIFQRLNIM 517
E++ HRNL+++ C + LV YM GS+ L + LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ A L YLH C +IH D+K +N+LLD+ A + DFG+AKL+ +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 196
Query: 578 ATIGYMAP 585
IG++AP
Sbjct: 197 GXIGHIAP 204
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 155/395 (39%), Gaps = 85/395 (21%)
Query: 12 LEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGXXX 71
L+EL L+ N G +P + N S L L L N LSG++ S L L +L LW
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWL--- 448
Query: 72 XXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIG 131
N L+G +P+ + +LE + ++TG+IP +
Sbjct: 449 ----------------------NMLEGEIPQELM--YVKTLETLILDFNDLTGEIPSGLS 484
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191
N TNL I L N+L G I + +L+ L L L +N G+IP ++ L L+L
Sbjct: 485 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 544
Query: 192 NKLSRSIPACF--------NNLIALRILSLGSNDPLPLE---IGNLKVLVGI-------- 232
N + +IPA N IA + ND + E GNL GI
Sbjct: 545 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 604
Query: 233 ------------------------------DFSMNNFSGIIPKEIGGLKNLEYLFLGYNR 262
D S N SG IPKEIG + L L LG+N
Sbjct: 605 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 664
Query: 263 LQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFG 322
+ G IPD G G IP ++ L+ L +++LS N L G IP G F
Sbjct: 665 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 724
Query: 323 NFSAESFEGNELLCGSPNLQVPPCKTS-----IHH 352
F F N LCG P +P C S HH
Sbjct: 725 TFPPAKFLNNPGLCGYP---LPRCDPSNADGYAHH 756
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 143/344 (41%), Gaps = 33/344 (9%)
Query: 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNL 61
IP +G+ L+ LD+ NKL G AI + LKLL + N G I + L +L
Sbjct: 213 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG---PIPPLPLKSL 268
Query: 62 EELVLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPK------------TSIGNLS 109
+ L L C +LT + LS N G +P S N S
Sbjct: 269 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 328
Query: 110 -----------HSLEDFQMHNCNVTGDIPEEIGNLT-NLITIDLGGNKLNGSILITLSKL 157
L+ + +G++PE + NL+ +L+T+DL N +G IL L +
Sbjct: 329 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 388
Query: 158 QK--LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGS 215
K LQ L L +N G IP + EL L L N LS +IP+ +L LR L L
Sbjct: 389 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 448
Query: 216 N---DPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFG 272
N +P E+ +K L + N+ +G IP + NL ++ L NRL G IP G
Sbjct: 449 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 273 XXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIP 316
G IPA L L L+L+ N G IP
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 1 EIP-LEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLP 59
EIP G L LDL N G VP + S L+ L L N+ SG L T +++
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 340
Query: 60 NLEELVLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHN 119
L+ L L SL + LS+N G + N ++L++ + N
Sbjct: 341 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 400
Query: 120 CNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC 179
TG IP + N + L+++ L N L+G+I +L L KL+ L L N LEG IP ++
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 460
Query: 180 RLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSN---DPLPLEIGNLKVLVGIDFSM 236
+ L L L N L+ IP+ +N L +SL +N +P IG L+ L + S
Sbjct: 461 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 237 NNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIP 268
N+FSG IP E+G ++L +L L N G IP
Sbjct: 521 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 153/387 (39%), Gaps = 80/387 (20%)
Query: 12 LEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGXXX 71
L+EL L+ N G +P + N S L L L N LSG++ S L L +L LW
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWL--- 451
Query: 72 XXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIG 131
N L+G +P+ + +LE + ++TG+IP +
Sbjct: 452 ----------------------NMLEGEIPQELM--YVKTLETLILDFNDLTGEIPSGLS 487
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191
N TNL I L N+L G I + +L+ L L L +N G+IP ++ L L+L
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 192 NKLSRSIPACF--------NNLIALRILSLGSNDPLPLE---IGNLKVLVGI-------- 232
N + +IPA N IA + ND + E GNL GI
Sbjct: 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607
Query: 233 ------------------------------DFSMNNFSGIIPKEIGGLKNLEYLFLGYNR 262
D S N SG IPKEIG + L L LG+N
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 263 LQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFG 322
+ G IPD G G IP ++ L+ L +++LS N L G IP G F
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727
Query: 323 NFSAESFEGNELLCGSPNLQVPPCKTS 349
F F N LCG P +P C S
Sbjct: 728 TFPPAKFLNNPGLCGYP---LPRCDPS 751
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 143/344 (41%), Gaps = 33/344 (9%)
Query: 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNL 61
IP +G+ L+ LD+ NKL G AI + LKLL + N G I + L +L
Sbjct: 216 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG---PIPPLPLKSL 271
Query: 62 EELVLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPK------------TSIGNLS 109
+ L L C +LT + LS N G +P S N S
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 110 -----------HSLEDFQMHNCNVTGDIPEEIGNLT-NLITIDLGGNKLNGSILITLSKL 157
L+ + +G++PE + NL+ +L+T+DL N +G IL L +
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391
Query: 158 QK--LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGS 215
K LQ L L +N G IP + EL L L N LS +IP+ +L LR L L
Sbjct: 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451
Query: 216 N---DPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFG 272
N +P E+ +K L + N+ +G IP + NL ++ L NRL G IP G
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 273 XXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIP 316
G IPA L L L+L+ N G IP
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 1 EIP-LEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLP 59
EIP G L LDL N G VP + S L+ L L N+ SG L T +++
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 343
Query: 60 NLEELVLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHN 119
L+ L L SL + LS+N G + N ++L++ + N
Sbjct: 344 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 120 CNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC 179
TG IP + N + L+++ L N L+G+I +L L KL+ L L N LEG IP ++
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 180 RLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSN---DPLPLEIGNLKVLVGIDFSM 236
+ L L L N L+ IP+ +N L +SL +N +P IG L+ L + S
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 237 NNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIP 268
N+FSG IP E+G ++L +L L N G IP
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS 466
++L AT+ F LIG G FG VYK L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASA 523
RH +L+ +I C L+ +YM G+L++HLY ++ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
L YLH + +IH D+K N+LLD+N + ++DFGI+K DQ+ T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 584 AP 585
P
Sbjct: 209 DP 210
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS 466
++L AT+ F LIG G FG VYK L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASA 523
RH +L+ +I C L+ +YM G+L++HLY ++ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
L YLH + +IH D+K N+LLD+N + ++DFGI+K Q+ T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 584 AP 585
P
Sbjct: 209 DP 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 30/259 (11%)
Query: 89 IGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNG 148
IG NN + I P +I L+ L + + NV+G IP+ + + L+T+D N L+G
Sbjct: 83 IGGINNLVGPIPP--AIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG 139
Query: 149 SILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELY-KLELGGNKLSRSIPACFNNLIA 207
++ ++S L L G+ D N++ G+IPD +L+ + + N+L+ IP F NL
Sbjct: 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-- 197
Query: 208 LRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLI 267
L +D S N G G KN + + L N L +
Sbjct: 198 --------------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 268 PDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAE 327
G G +P L +L +L LN+SFN L GEIP+GG+ F
Sbjct: 238 -GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVS 296
Query: 328 SFEGNELLCGSPNLQVPPC 346
++ N+ LCGSP +P C
Sbjct: 297 AYANNKCLCGSP---LPAC 312
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSL-SSITDVRLPN 60
IP I L L L + + G +P + + TL L N+LSG+L SI+ LPN
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS--LPN 150
Query: 61 LEELVLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNC 120
L + G K T + +S N L G +P T NL+ + D +
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNLAFVDLSRN-- 207
Query: 121 NVTGDIPEEIGNLTNLITIDLGGNKLNGSI-LITLSKLQKLQGLVLDDNKLEGSIPDDIC 179
+ GD G+ N I L N L + + LSK L GL L +N++ G++P +
Sbjct: 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSK--NLNGLDLRNNRIYGTLPQGLT 265
Query: 180 RLVELYKLELGGNKLSRSIP 199
+L L+ L + N L IP
Sbjct: 266 QLKFLHSLNVSFNNLCGEIP 285
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 401 WRTFSYLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 450
+ +FS+ EL T+ F E N +G GGFG VYK + + VAVK + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--- 507
+ FD E ++M +H NL++++ S+ + LV YMP GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 127
Query: 508 --LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565
L R I A+ + +LH IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 566 GEDQSMTQTQTLATIGYMAP 585
Q++ ++ + T YMAP
Sbjct: 185 KFAQTVMXSRIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 401 WRTFSYLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 450
+ +FS+ EL T+ F E N +G GGFG VYK + + VAVK + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--- 507
+ FD E ++M +H NL++++ S+ + LV YMP GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 127
Query: 508 --LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565
L R I A+ + +LH IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 566 GEDQSMTQTQTLATIGYMAP 585
Q++ + + T YMAP
Sbjct: 185 KFAQTVMXXRIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 401 WRTFSYLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 450
+ +FS+ EL T+ F E N +G GGFG VYK + + VAVK + ++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--- 507
+ FD E ++M +H NL++++ S+ + LV YMP GSL L +C+
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGT 121
Query: 508 --LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565
L R I A+ + +LH IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 566 GEDQSMTQTQTLATIGYMAP 585
Q + + + T YMAP
Sbjct: 179 KFAQXVMXXRIVGTTAYMAP 198
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK--SFDVECEIMKSIRHRNLIKVISSC 479
IG G FG+V++A G +VAVK+ Q A + F E IMK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCI--LDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V EY+ +GSL + L+ + LD +RL++ DVA + YLH + P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK N+L+D + DFG+++L + T +MAP
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAP 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK--SFDVECEIMKSIRHRNLIKVISSC 479
IG G FG+V++A G +VAVK+ Q A + F E IMK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCI--LDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V EY+ +GSL + L+ + LD +RL++ DVA + YLH + P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+LK N+L+D + DFG+++L ++ T +MAP
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 401 WRTFSYLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 450
+ +FS+ EL T+ F E N G GGFG VYK + + VAVK + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--- 507
+ FD E ++ +H NL++++ S+ + LV Y P GSL L +C+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGT 118
Query: 508 --LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565
L R I A+ + +LH IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 566 GEDQSMTQTQTLATIGYMAP 585
Q + ++ + T Y AP
Sbjct: 176 KFAQXVXXSRIVGTTAYXAP 195
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNL--QCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ + F++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL KHL+ +FQ ++I A ++YLH + +IH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+K +N+ L + + + DFG+A + S Q ++ +MAP
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIM 464
+ + F ++G G F +V AR L E A+K+ L+ R K V E ++M
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 64
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
+ H +K+ + ++E L Y G L K++ + R ++ SAL
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 123
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
EYLH +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++
Sbjct: 124 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 585 P 585
P
Sbjct: 181 P 181
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIM 464
+ + F ++G G F +V AR L E A+K+ L+ R K V E ++M
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 63
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
+ H +K+ + ++E L Y G L K++ + R ++ SAL
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 122
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
EYLH +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++
Sbjct: 123 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 585 P 585
P
Sbjct: 180 P 180
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIM 464
+ + F ++G G F +V AR L E A+K+ L+ R K V E ++M
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 62
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
+ H +K+ + ++E L Y G L K++ + R ++ SAL
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 121
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
EYLH +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++
Sbjct: 122 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 585 P 585
P
Sbjct: 179 P 179
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 92
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 151
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIM 464
+ + F ++G G F +V AR L E A+K+ L+ R K V E ++M
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 61
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
+ H +K+ + ++E L Y G L K++ + R ++ SAL
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 120
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
EYLH +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++
Sbjct: 121 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 585 P 585
P
Sbjct: 178 P 178
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 71
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 130
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 421 LIGRGGFGSVYKA-RLGDGMEVAVKVF----NLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+IG GGFG VY+A +GD EVAVK + + ++ E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
C E LV+E+ G L + L DI +N + +A + YLH P+
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 536 IHCDLKPSNVLLDD--------NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK SN+L+ N I ++DFG+A+ E T+ +MAP
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAP 183
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 153 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 130
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+++ ++ + ++I A ++YLH + +IH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L ++ + DFG+A + S Q +I +MAP
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 127 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 128 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 155
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 121 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 122 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 129 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 416 FSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R G VAVK + F+ E EI+K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 466 SIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
S++H N++K C + + L++EY+P GSL +L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 416 FSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R G VAVK + F+ E EI+K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 466 SIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
S++H N++K C + + L++EY+P GSL +L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 126 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F +V AR L E A+K+ L+ R K V E ++M +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 94
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ ++E L Y G L K++ + R ++ SALEYL
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 153
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 416 FSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R G VAVK + F+ E EI+K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 466 SIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
S++H N++K C + + L++EY+P GSL +L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-----ECEIMKSI 467
+ F ++G G F + AR L E A+K+ L+ R K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H +K+ + ++E L Y G L K++ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H +IH DLKP N+LL+++M ++DFG AK+L E + + T Y++P
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 416 FSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R G VAVK + F+ E EI+K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 466 SIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
S++H N++K C + + L++EY+P GSL +L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 416 FSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R G VAVK + F+ E EI+K
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 466 SIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
S++H N++K C + + L++EY+P GSL +L +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 125 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+++ ++ + ++I A ++YLH + +IH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L ++ + DFG+A S Q +I +MAP
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++E++P GSL ++L +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH DL N+L+++ + DFG+ K+L
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A S Q +I +MAP
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A S Q +I +MAP
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+ ++ + ++I A ++YLH + +IH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 148
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L +++ + DFG+A S Q +I +MAP
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 75 EPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 131 RAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 174
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 334 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 389
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 390 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 433
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +V ++ SL HL+++ ++ + ++I A ++YLH + +IH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLK +N+ L ++ + DFG+A S Q +I +MAP
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 78 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 134 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 177
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 411 RATDGFSENNL-----IGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVE 460
R F E +L +G+G FGSV R G VAVK + F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
EI+KS++H N++K C + + L++EY+P GSL +L +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ +EYL + IH +L N+L+++ + DFG+ K+L
Sbjct: 123 QICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 251 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 307 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 251 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 307 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 138 RAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP 181
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 138 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 181
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQ-C--RRAFKSFDV 459
F + E+ RA IG+G FG V + D ++ A+K N Q C R ++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 460 ECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMID 519
E +IM+ + H L+ + S +EE +V++ + G L HL + +L + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICE 123
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA- 578
+ AL+YL + +IH D+KP N+LLD++ +++DF IA +L E TQ T+A
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAG 176
Query: 579 TIGYMAP 585
T YMAP
Sbjct: 177 TKPYMAP 183
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 81
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 142 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V+EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 184
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 156
Query: 475 V------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ +E + LVL+Y+P+ + +H L + M + +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 527 LH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 110
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 84
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 145 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 115
Query: 475 V------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ +E + LVL+Y+P+ + +H L + M + +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 527 LH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V+EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 110
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 112
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 173 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 104
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 165 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 202
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L T L + Q +++ +AS + Y+ +H DL
Sbjct: 251 EPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 307 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 95
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 156 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 193
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 89
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 150 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 187
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 88
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 88
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 77
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 138 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 175
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 80
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 141 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 422 IGRGGFGSVYKAR------LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V+ A D M VAVK A K F E E++ +++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYS---------------TNCILDIFQRLNIMIDV 520
C + + +V EYM G L K L + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
AS + YL S +H DL N L+ N++ + DFG+++ + D T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 581 GYMAP 585
+M P
Sbjct: 200 RWMPP 204
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAF-----KSFDVECEIMKSIRHRNLIKV 475
IGRG FG V+ RL D VAVK CR F E I+K H N++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
I C+ ++ +V+E + G L + L + L ++ D A+ +EYL C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAK 562
IH DL N L+ + + +SDFG+++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL C VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 133
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 176
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 420 NLIGRGGFGSVYKARLGDGMEVAVKV----FNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
++G+G FG K + EV V F+ + +R F E ++M+ + H N++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKF 72
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
I ++ + EY+ G+L + S + QR++ D+AS + YLH S +
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
IH DL N L+ +N ++DFG+A+L++ E TQ + L ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEK---TQPEGLRSL 171
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +AFK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQG-KAFK--NRELQIMRKLDHCNIV 76
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAF-----KSFDVECEIMKSIRHRNLIKV 475
IGRG FG V+ RL D VAVK CR F E I+K H N++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
I C+ ++ +V+E + G L + L + L ++ D A+ +EYL C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAK 562
IH DL N L+ + + +SDFG+++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +AFK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQG-KAFK--NRELQIMRKLDHCNIV 76
Query: 474 KV------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ +E + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
Y+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL C VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 130
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + F E E+M + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL C VIH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 150
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 193
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL C VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 128
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 171
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 422 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC 479
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 480 SNEEFKG---LVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
E KG +V EYM +GSL +L S +L L +DV A+EYL
Sbjct: 75 VEE--KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 129
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DL NVL+ ++ +A +SDFG+ K + S TQ + + AP
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 174
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 74 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 130 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 173
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAF-----KSFDVECEIMKSIRHRNLIKV 475
+G GGFG V + D G +VA+K QCR+ + + +E +IMK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 476 ------ISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYL 527
+ + + L +EY G L K+L + C L ++ D++SAL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 528 HFGCSTPVIHCDLKPSNVLLD---DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
H +IH DLKP N++L +I + D G AK L DQ T+ + T+ Y+A
Sbjct: 138 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 191
Query: 585 P 585
P
Sbjct: 192 P 192
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAF-----KSFDVECEIMKSIRHRNLIKV 475
+G GGFG V + D G +VA+K QCR+ + + +E +IMK + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 476 ------ISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYL 527
+ + + L +EY G L K+L + C L ++ D++SAL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 528 HFGCSTPVIHCDLKPSNVLLD---DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
H +IH DLKP N++L +I + D G AK L DQ T+ + T+ Y+A
Sbjct: 139 H---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 192
Query: 585 P 585
P
Sbjct: 193 P 193
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 22/182 (12%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+++ +IG G FG VY+A+L D E VA+K LQ +R FK + E +IM+ + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 474 KV----ISSCSNEE--FKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALE 525
++ SS ++ + LVL+Y+P+ + +H L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 526 YLH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
Y+H FG + H D+KP N+LLD D + L DFG AK L+ + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 584 AP 585
AP
Sbjct: 190 AP 191
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 417 SENNLIGRGGFGSVYKARLGDG---MEVAVKVFNLQCRRAFKS---FDVECEIMKSIRHR 470
+ +IG G FG VYK L EV V + L+ K F E IM H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N+I++ S + ++ EYM G+L+K L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQT 574
+ +H DL N+L++ N++ +SDFG++++L + ++ T
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 76 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 132 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 175
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 26/186 (13%)
Query: 419 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDVECEIMKSI-RHRNLI 473
++IG G FG V KAR+ DG M+ A+K + + F E E++ + H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLY---------------STNCILDIFQRLNIMI 518
++ +C + + L +EY P G+L L ST L Q L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
DVA ++YL IH DL N+L+ +N +A ++DFG+++ G++ + +T
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 579 TIGYMA 584
+ +MA
Sbjct: 194 PVRWMA 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG+A++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 26/186 (13%)
Query: 419 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDVECEIMKSI-RHRNLI 473
++IG G FG V KAR+ DG M+ A+K + + F E E++ + H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLY---------------STNCILDIFQRLNIMI 518
++ +C + + L +EY P G+L L ST L Q L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
DVA ++YL IH DL N+L+ +N +A ++DFG+++ G++ + +T
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 579 TIGYMA 584
+ +MA
Sbjct: 204 PVRWMA 209
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 422 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC 479
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 480 SNEEFKG---LVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
E KG +V EYM +GSL +L S +L L +DV A+EYL
Sbjct: 84 VEE--KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 138
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DL NVL+ ++ +A +SDFG+ K + S TQ + + AP
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 183
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 422 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC 479
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 480 SNEEFKG---LVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
E KG +V EYM +GSL +L S +L L +DV A+EYL
Sbjct: 69 VEE--KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 123
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DL NVL+ ++ +A +SDFG+ K + S TQ + + AP
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 168
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL C VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 131
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 174
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 21/177 (11%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDVECEIMKSIRHRNLI 473
IG+GGFG V+K RL D VA+K L + F+ F E IM ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 534 PVIHCDLKPSNVL---LDDN--MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
P++H DL+ N+ LD+N + A ++DFG+++ + + + L +MAP
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV-----HSVSGLLGNFQWMAP 195
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
+++ +IG G FG VY+A+L D E+ V + + +AFK + E +IM+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 475 V------ISSCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ +E + LVL+Y+P + +H L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 527 LH-FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLI 565
+H FG + H D+KP N+LLD D + L DFG AK L+
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 405 SYLELCRATDGFSEN---------NLIGRGGFGSVYKARL----GDGMEVAVKVFNL-QC 450
+Y E RA F+ +IG G G V RL + VA+K
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDI 510
R + F E IM H N+I++ + +V EYM GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 511 FQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE-DQ 569
Q + ++ V + + YL +H DL NVL+D N++ +SDFG++++L + D
Sbjct: 151 MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 570 SMTQTQTLATIGYMAP 585
+ T T I + AP
Sbjct: 208 AXTTTGGKIPIRWTAP 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 19/180 (10%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
++ +IG G FG V++A+L + EVA+K LQ +R FK + E +IM+ ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVD 96
Query: 475 VIS------SCSNEEFKGLVLEYMPQG--SLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ + +E F LVLEY+P+ +H + + M + +L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 527 LHFGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H S + H D+KP N+LLD + + L DFG AK+LI + +++ + + Y AP
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRAP 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 405 SYLELCRATDGFSEN---------NLIGRGGFGSVYKARL----GDGMEVAVKVFNL-QC 450
+Y E RA F+ +IG G G V RL + VA+K
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDI 510
R + F E IM H N+I++ + +V EYM GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 511 FQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE-DQ 569
Q + ++ V + + YL +H DL NVL+D N++ +SDFG++++L + D
Sbjct: 151 MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 570 SMTQTQTLATIGYMAP 585
+ T T I + AP
Sbjct: 208 AYTTTGGKIPIRWTAP 223
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVA---VKVFNLQCRRAFKSFDVECEIMKSIRHRN 471
F IGRG F VY+A L DG+ VA V++F+L +A E +++K + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLE---KHLYSTNCILDIFQRLNIMIDVASALEYLH 528
+IK +S + +VLE G L KH ++ + + SALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H D+KP+NV + + L D G+ + ++ + T YM+P
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSP 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V+EYM +G L L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIM-------KSIRHRNL 472
+IG+G FG V AR EV V LQ + K + E IM K+++H L
Sbjct: 44 KVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFL 101
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ + S + VL+Y+ G L HL C L+ R ++ASAL YLH S
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---S 157
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+++ DLKP N+LLD L+DFG+ K I + + T + T Y+AP
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI--EHNSTTSTFCGTPEYLAP 208
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 422 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC 479
IG+G FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 480 SNEEFKG---LVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
E KG +V EYM +GSL +L S +L L +DV A+EYL
Sbjct: 256 VEE--KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 310
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DL NVL+ ++ +A +SDFG+ K + S TQ + + AP
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 355
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 AAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 21/177 (11%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDVECEIMKSIRHRNLI 473
IG+GGFG V+K RL D VA+K L + F+ F E IM ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 534 PVIHCDLKPSNVL---LDDN--MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
P++H DL+ N+ LD+N + A ++DFG ++ + + + L +MAP
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV-----HSVSGLLGNFQWMAP 195
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDG-MEVAVKV-FNLQCRR--AFKSFDVECEIMKSIRH 469
D F +G+G FG+VY AR VA+KV F Q + E EI + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N++++ + + L+LEY P+G L K L +C D + IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH- 140
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+KP N+LL ++DFG + S+ + T+ Y+ P
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPP 190
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 154
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 422 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V+ A D + VAVK A K F E E++ +++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTN------------CILDIFQRLNIMIDVASA 523
C + +V EYM G L K L + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
+ YL S +H DL N L+ +N++ + DFG+++ + D T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 584 AP 585
P
Sbjct: 198 PP 199
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 164
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY + VAVK + F E +MK I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +V EYMP G+L +L N + L + ++SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 137
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V EYM GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG+ ++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K + ++F E ++MK +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + Q +++ +AS + Y+ +H DL
Sbjct: 252 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+ +L+ ED T Q I + AP
Sbjct: 308 RAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAP 351
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 416 FSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRR--------AFKSFDVECEIMKS 466
+ ++IGRG V + G E AVK+ + R ++ E I++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 467 IR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALE 525
+ H ++I +I S + F LV + M +G L +L + L + +IM + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVS 214
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMA 584
+LH + ++H DLKP N+LLDDNM LSDFG + L GE + T GY+A
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLA 267
Query: 585 P 585
P
Sbjct: 268 P 268
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS--IRHRNLIKVISS 478
LIGRG +G+VYK L D VAVKVF+ R+ F + E I + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN---EKNIYRVPLMEHDNIARFIVG 75
Query: 479 CSNEEFKG-----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS- 532
G LV+EY P GSL K+L D + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 533 ----TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE------DQSMTQTQTLATIG 581
P I H DL NVL+ ++ +SDFG++ L G ++ + TI
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 582 YMAP 585
YMAP
Sbjct: 194 YMAP 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 26/186 (13%)
Query: 419 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDVECEIMKSI-RHRNLI 473
++IG G FG V KAR+ DG M+ A+K + + F E E++ + H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLY---------------STNCILDIFQRLNIMI 518
++ +C + + L +EY P G+L L ST L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
DVA ++YL IH +L N+L+ +N +A ++DFG+++ G++ + +T
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 579 TIGYMA 584
+ +MA
Sbjct: 201 PVRWMA 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G+G FG V+ VA+K ++F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 482 EEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +G L L L + Q +++ +AS + Y+ +H DL
Sbjct: 85 EPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +N++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 141 RAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 421 LIGRGGFGSVYKARLGD--GMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKV 475
+IG G FG V + RL E V + L+ R + F E IM H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+N ++ E+M G+L+ L + + Q + ++ +AS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAP 585
+H DL N+L++ N++ +SDFG+++ L T+T +L I + AP
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ LV E+M G L +L + + L + +DV + YL VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+ +N + +SDFG+ + ++ +DQ + T T + + +P
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK-----SFDVECEIMKSIRH 469
+ + + +G G F +VYKAR + + VA+K L R K + E ++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N+I ++ + ++ LV ++M + LE + + +L M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH- 129
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP+N+LLD+N + L+DFG+AK +++ + T Y AP
Sbjct: 130 --QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRAP 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 426 GFGSVYKARLGD----GMEVAVKVFNLQCRRAFKSFDV------ECEIMKSIRHRNLIKV 475
G G+ K ++G+ G +VAVK+ N R+ +S DV E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
S +V+EY+ G L ++ + ++ R + + SA++Y H V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DLKP NVLLD +M A ++DFG++ ++ D +T + + Y AP
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRT-SCGSPNYAAP 179
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +++E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 182
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 22/178 (12%)
Query: 423 GRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS--IRHRNLIKVISS-- 478
RG FG V+KA+L + VAVK+F LQ +++++S E EI + ++H NL++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS---EREIFSTPGMKHENLLQFIAAEK 79
Query: 479 -CSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF------- 529
SN E + L+ + +GSL +L I+ + ++ ++ L YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 530 -GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP 585
G + H D K NVLL ++ A L+DFG+A + G+ T Q + T YMAP
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAP 194
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 21/177 (11%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDVECEIMKSIRHRNLI 473
IG+GGFG V+K RL D VA+K L + F+ F E IM ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 534 PVIHCDLKPSNVL---LDDN--MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
P++H DL+ N+ LD+N + A ++DF +++ + + + L +MAP
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV-----HSVSGLLGNFQWMAP 195
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 426 GFGSVYKARLGD----GMEVAVKVFNLQCRRAFKSFDV------ECEIMKSIRHRNLIKV 475
G G+ K ++G+ G +VAVK+ N R+ +S DV E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
S +V+EY+ G L ++ + ++ R + + SA++Y H V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+H DLKP NVLLD +M A ++DFG++ ++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 419 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVIS 477
+ +G G FG VY+ + VAVK + F E +MK I+H NL++++
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLG 74
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C+ E ++ E+M G+L +L N + L + ++SA+EYL I
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DL N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P+G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYC 129
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +++E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSIRHRNLIKVIS 477
+G+G FG+VY AR + A+KV F Q +A E EI +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ L+LEY P G++ + L + D + + ++A+AL Y H S VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LL N ++DFG + S +T T+ Y+ P
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 179
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
LE D + ++G+G +G VY R L + + +A+K + R + E + K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMI-DVASA 523
++H+N+++ + S S F + +E +P GSL L S + D Q + +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDD-NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 582
L+YLH ++H D+K NVL++ + + +SDFG +K L G + T+T T T+ Y
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQY 175
Query: 583 MAP 585
MAP
Sbjct: 176 MAP 178
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +++E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRR---AFKSFDVECEIMKSIRHRNLIKVIS 477
+G GG +VY A ++VA+K + R K F+ E + H+N++ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
++ LV+EY+ +L +++ S + L + +N + +++ H ++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQT-QTLATIGYMAP 585
D+KP N+L+D N + DFGIAK L + S+TQT L T+ Y +P
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSP 181
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 88 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 143
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 144 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 187
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 89 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 144
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 145 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 188
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 82 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 137
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 138 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 181
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 179
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +++E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E +++E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMK 465
LE D + ++G+G +G VY R L + + +A+K + R + E + K
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMI-DVASA 523
++H+N+++ + S S F + +E +P GSL L S + D Q + +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDD-NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 582
L+YLH ++H D+K NVL++ + + +SDFG +K L G + T+T T T+ Y
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQY 189
Query: 583 MAP 585
MAP
Sbjct: 190 MAP 192
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 419 NNLIGRGGFGSVYKARL-GDGME---VAVKV----FNLQCRRAFKSFDVECEIMKSIRHR 470
+IG G FG V + RL G + VA+K + + RR F S E IM H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS---EASIMGQFEHP 75
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N+I++ +N ++ E+M G+L+ L + + Q + ++ +AS + YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL--- 132
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAP 585
+H DL N+L++ N++ +SDFG+++ L T T +L I + AP
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 81 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 180
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T+ T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDYLPP 175
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 186
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 179
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 179
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 85 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 140
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 141 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 184
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 90 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 145
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 146 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 189
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 420 NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDV------ECEIMKSIRHRNL 472
+ +G G FG V + G +VAVK+ N R+ +S DV E + +K RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
IK+ S +V+EY+ G L ++ N LD + + + S ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
V+H DLKP NVLLD +M A ++DFG++ ++
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 75 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 174
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 185
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 389 PSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKV 445
PS AN L R F EL + ++G G FG+V+K G+ +++ V +
Sbjct: 16 PSEKANKVLA---RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 446 FNLQCRRAFKSFDVECEIM---KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY 502
++ + +SF + M S+ H ++++++ C + LV +Y+P GSL H+
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVR 124
Query: 503 STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
L LN + +A + YL ++H +L NVLL ++DFG+A
Sbjct: 125 QHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 563 LLIGEDQSMTQTQTLATIGYMA 584
LL +D+ + ++ I +MA
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMA 203
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L D +VAVKV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V + E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+++ + DFGIA+ + S+TQT + T Y+
Sbjct: 130 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 584 AP 585
+P
Sbjct: 187 SP 188
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L D +VAVKV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V + E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+++ + DFGIA+ + S+TQT + T Y+
Sbjct: 130 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 584 AP 585
+P
Sbjct: 187 SP 188
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 422 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIKV 475
+G G FG V G G VAVK C +S + E +I++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 476 ISSCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C ++ K L V+EY+P GSL +L + + + Q L + + YLH S
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAP 585
IH +L NVLLD++ + + DFG+AK + G + + + + + AP
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 185
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 389 PSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-F 446
P N+ L + + + A + F +G+G FG+VY AR + A+KV F
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 447 NLQCRRA--FKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST 504
Q +A E EI +RH N++++ + L+LEY P G++ + L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 505 NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ D + + ++A+AL Y H S VIH D+KP N+LL ++DFG +
Sbjct: 129 S-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--- 181
Query: 565 IGEDQSMTQTQTLATIGYMAP 585
S +T T+ Y+ P
Sbjct: 182 -VHAPSSRRTTLCGTLDYLPP 201
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI------DVASALEYLHFGCSTP 534
E ++ E+M G+L +L N Q +N ++ ++SA+EYL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DL N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 194
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 183
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 183
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VA+K +SF E +IMK ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 482 EEFKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +V EYM +GSL L L + +++ VA+ + Y+ IH DL
Sbjct: 76 EPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ + +I ++DFG+A+L+ ED T Q I + AP
Sbjct: 132 RSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAP 175
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V E M GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 25/179 (13%)
Query: 423 GRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE 482
RG FG V+KA+L + VAVK+F +Q ++++++ + E + ++H N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGA---- 86
Query: 483 EFKG--------LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF----- 529
E +G L+ + +GSL L + ++ + +I +A L YLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 530 --GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP 585
G + H D+K NVLL +N+ A ++DFG+A K G+ T Q + T YMAP
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAP 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P+G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH---FGCS 532
L+ Y GSL +L T LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 533 -TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-----LATIGYMAP 585
P I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ + +VAVK + ++F E +MK+++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFGCSTPVIHCDL 540
EE ++ EYM +GSL L S + +L + +A + Y+ IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +NVL+ ++++ ++DFG+A+++ ED T + I + AP
Sbjct: 137 RAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 180
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 422 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTN--------------CILDIFQRLNIMIDVA 521
C+ +V EYM G L + L S L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 522 SALEY---LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
+ + Y LHF +H DL N L+ ++ + DFG+++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 579 TIGYMAP 585
I +M P
Sbjct: 223 PIRWMPP 229
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 422 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIKV 475
+G G FG V G G VAVK C +S + E EI++++ H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 476 ISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C ++ K LV+EY+P GSL +L +C+ + Q L + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 131
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
IH L NVLLD++ + + DFG+AK
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPP 175
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N + L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGE 567
L N L+ +N + ++DFG+++L+ G+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V E M GSL+ L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 420 NLIGRGGFGSVYKARL----GDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLI 473
++G G FGSV + L G ++VAVK L +R + F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 474 KVISSCSNEEFKGL-----VLEYMPQGSLEKHLYSTNC-----ILDIFQRLNIMIDVASA 523
+++ C +G+ +L +M G L +L + + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568
+EYL + +H DL N +L D+M ++DFG++K + D
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGE 567
L N L+ +N + ++DFG+++L+ G+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 174
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+ ++G G FG V RL E++V + L+ + + F E IM H N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ + + +V E M GSL+ L + + Q + ++ +AS ++YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 137
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 422 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIKV 475
+G G FG V G G VAVK C +S + E EI++++ H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 476 ISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C ++ K LV+EY+P GSL +L +C+ + Q L + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 130
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
IH L NVLLD++ + + DFG+AK
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++ +
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 422 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V R GD G +VAVK + E EI++++ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 476 ISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C+ + G L++E++P GSL+++L +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
+H DL NVL++ + DFG+ K + + + T
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH---FGCS 532
L+ Y GSL +L T LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 533 -TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-----LATIGYMAP 585
P I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH---FGCS 532
L+ Y GSL +L T LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 533 -TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-----LATIGYMAP 585
P I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VAVK+ + + F E + M + H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
E +V EY+ G L +L S L+ Q L + DV + +L S IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
N L+D ++ +SDFG+ + ++ +DQ ++ T + + AP
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP 174
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 407 LELCRATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKS 456
L C+ F E +L +G+G FGSV R LGD G VAVK +
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 457 FDVECEIMKSIRHRNLIKV--ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL 514
F E +I+K++ ++K +S + LV+EY+P G L L LD + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQ 573
+ +EYL S +H DL N+L++ ++DFG+AKLL + +D + +
Sbjct: 131 LYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 574 TQTLATIGYMAP 585
+ I + AP
Sbjct: 188 EPGQSPIFWYAP 199
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 175
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSIRHRNLIKVIS 477
+G+G FG+VY AR + A+KV F Q +A E EI +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ L+LEY P G++ + L + D + + ++A+AL Y H S VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 538 CDLKPSNVLLDDNMIAYLSDFG 559
D+KP N+LL N ++DFG
Sbjct: 136 RDIKPENLLLGSNGELKIADFG 157
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 175
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 175
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 422 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V R GD G +VAVK + E EI++++ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 476 ISSCSNEEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C+ + G L++E++P GSL+++L +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
+H DL NVL++ + DFG+ K + + + T
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 176
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 410 CRATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDV 459
C+ F E +L +G+G FGSV R LGD G VAVK + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 460 ECEIMKSIRHRNLIKV--ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIM 517
E +I+K++ ++K +S + LV+EY+P G L L LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQT 576
+ +EYL S +H DL N+L++ ++DFG+AKLL + +D + +
Sbjct: 121 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 577 LATIGYMAP 585
+ I + AP
Sbjct: 178 QSPIFWYAP 186
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 180
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 419 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVIS 477
+ +G G +G VY+ + VAVK + F E +MK I+H NL++++
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLG 74
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C+ E ++ E+M G+L +L N + L + ++SA+EYL I
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DL N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAP 179
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 422 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIKV 475
+G G FG V G G VAVK C +S + E +I++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 476 ISSCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C ++ K L V+EY+P GSL +L + + + Q L + + YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAP 585
IH +L NVLLD++ + + DFG+AK + G + + + + + AP
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPP 176
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
N L++D + +SDFG+++ ++ ++ + ++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR 164
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 138
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++ +
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++ +
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 422 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTN--------------CILDIFQRLNIMIDVA 521
C+ +V EYM G L + L S L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 522 SALEY---LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
+ + Y LHF +H DL N L+ ++ + DFG+++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 579 TIGYMAP 585
I +M P
Sbjct: 194 PIRWMPP 200
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 172
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 141
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 192
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 422 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTN--------------CILDIFQRLNIMIDVA 521
C+ +V EYM G L + L S L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 522 SALEY---LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
+ + Y LHF +H DL N L+ ++ + DFG+++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 579 TIGYMAP 585
I +M P
Sbjct: 200 PIRWMPP 206
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 385
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDVECEIMKSIRH 469
D F +G+G FG+VY AR + A+KV L+ E EI +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N++++ + + + L+LE+ P+G L K L + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+KP N+L+ ++DFG + S+ + T+ Y+ P
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPP 181
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG+G G+VY A + G EVA++ NLQ + + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+EY+ GSL + T +D Q + + ALE+LH S VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K N+LL + L+DFG + E +++ + T +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAP 185
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L D +VAVKV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V + E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+L+ + DFGIA+ + S+ QT + T Y+
Sbjct: 130 NFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 584 AP 585
+P
Sbjct: 187 SP 188
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDVECEIMKSIRH 469
D F +G+G FG+VY AR + A+KV L+ E EI +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N++++ + + + L+LE+ P+G L K L + D + M ++A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 132
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+KP N+L+ ++DFG + S+ + T+ Y+ P
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPP 182
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 389 PSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-F 446
P N+ L + + + A + F +G+G FG+VY AR + A+KV F
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 447 NLQCRRA--FKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST 504
Q +A E EI +RH N++++ + L+LEY P G++ + L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 505 NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA 561
+ D + + ++A+AL Y H S VIH D+KP N+LL ++DFG +
Sbjct: 129 S-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 131
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++ +
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 416 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R LGD G VAVK + F E +I+K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 466 SIRHRNLIKV--ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ ++K +S + LV+EY+P G L L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGY 582
+EYL S +H DL N+L++ ++DFG+AKLL + +D + + + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 583 MAP 585
AP
Sbjct: 185 YAP 187
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N ++ L + ++SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 427
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ + +VAVK + ++F E +MK+++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFGCSTPVIHCDL 540
EE ++ E+M +GSL L S + +L + +A + Y+ IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +NVL+ ++++ ++DFG+A+++ ED T + I + AP
Sbjct: 136 RAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 179
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 419 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
++GRG FG V KA+ +VA+K + R K+F VE + + H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCI--LDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C N LV+EY GSL L+ + ++ + + + YLH +I
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 537 HCDLKPSNVLL-DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP N+LL + + DFG A D T + +MAP
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP 173
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541
+ ++ EYM G L +L Q L + DV A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 127
Query: 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
N L++D + +SDFG+++ ++ ++ +
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH +L
Sbjct: 76 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 175
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 419 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
++GRG FG V KA+ +VA+K + R K+F VE + + H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCI--LDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C N LV+EY GSL L+ + ++ + + + YLH +I
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 537 HCDLKPSNVLL-DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP N+LL + + DFG A D T + +MAP
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP 172
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 416 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDVECEIMK 465
F E +L +G+G FGSV R LGD G VAVK + F E +I+K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 466 SIRHRNLIKV--ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ ++K +S LV+EY+P G L L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGY 582
+EYL S +H DL N+L++ ++DFG+AKLL + +D + + + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 583 MAP 585
AP
Sbjct: 181 YAP 183
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 420 NLIGRGGFGSVYKARL---GDGMEVAVKVFNLQCRRAFKSFDVECEIM---KSIRHRNLI 473
++G G FG+V+K G+ +++ V + ++ + +SF + M S+ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+++ C + LV +Y+P GSL H+ L LN + +A + YL
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EH 134
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
++H +L NVLL ++DFG+A LL +D+ + ++ I +MA
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 389 PSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKA-RLGDG----MEVAV 443
PS A P A R EL R ++G G FG+VYK + +G + VA+
Sbjct: 22 PSGTA--PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAI 72
Query: 444 KVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY 502
K+ N +A F E IM S+ H +L++++ C + + LV + MP G L ++++
Sbjct: 73 KILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH 131
Query: 503 STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
+ LN + +A + YL ++H DL NVL+ ++DFG+A+
Sbjct: 132 EHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 563 LLIGEDQSMTQTQTLATIGYMA 584
LL G+++ I +MA
Sbjct: 189 LLEGDEKEYNADGGKMPIKWMA 210
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +G VY+ + VAVK + F E +MK I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
E ++ E+M G+L +L N + L + ++SA+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
L N L+ +N + ++DFG+++L+ G D I + AP
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 388
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAVK+ + + + E IMK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 130
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS 153
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
++ IG+G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ S + +V+EY+ GSL + T +D Q + + ALE+LH S
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+K N+LL + L+DFG + E QS T + T +MAP
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAP 185
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDVECEIMKSIRH 469
D F +G+G FG+VY AR + A+KV L+ E EI +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N++++ + + + L+LE+ P+G L K L + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+KP N+L+ ++DFG + S+ + T+ Y+ P
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPP 181
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
++ IG+G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ S + +V+EY+ GSL + T +D Q + + ALE+LH S
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
VIH D+K N+LL + L+DFG + E ++ + T +MAP
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 185
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 126
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H S VIH D+KP N+LL ++DFG
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG+G G+VY A + G EVA++ NLQ + + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+EY+ GSL + T +D Q + + ALE+LH S VIH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K N+LL + L+DFG + E ++ + T +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 186
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 414 DGFSENNLIGRGGFGSVY-KARLGDGMEVAVKVFNL-QCRRAFKSFDVECEIMKSIRHRN 471
D F +G G FG V+ G+E +K N + + + + E E++KS+ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNC---ILDIFQRLNIMIDVASALEYLH 528
+IK+ + +V+E G L + + S L +M + +AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 529 FGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L D + + DFG+A+L ++ S T T YMAP
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAP 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ ++ ++ +T A + +MA
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL +++FG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 419 NNLIGRGGFGSVYKARLG----DGMEVAVKVFNL-QCRRAFKSFDVECEIMKSIRHRNLI 473
+IG G FG V RL + VA+K + + + F E IM H N+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+ + + +V EYM GSL+ L + + Q + ++ +++ ++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDM 143
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL-EYLHFGCSTPVIHCDL 540
E ++ E+M +GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +++ ++DFG+A+++ ED T + I + AP
Sbjct: 138 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 181
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAVK+ + + + E IMK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G G V+ +VAVK Q + +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCI-LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E ++ EYM GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAP 179
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCRRA--FKSFDVECEIMKSI 467
A + F +G+G FG+VY AR + A+KV F Q +A E EI +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 126
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S VIH D+KP N+LL +++FG + S +T T+ Y+ P
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPP 177
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAVK+ + + + E IMK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 420 NLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLI 473
++G G FG+VYK + +G + VA+K+ N +A F E IM S+ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+++ C + + LV + MP G L ++++ + LN + +A + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
++H DL NVL+ ++DFG+A+LL G+++ I +MA
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAVK+ + + + E IMK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVF--NLQCRRAFKSFDVECEIMKSI 467
++ + + L+G G +G V K R D G VA+K F + + K E +++K +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEK-HLYSTNCILDIFQRLNIMIDVASALEY 526
RH NL+ ++ C ++ LV E++ L+ L+ + Q+ + + + + +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LFQIINGIGF 139
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S +IH D+KP N+L+ + + L DFG A+ L + +AT Y AP
Sbjct: 140 CH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL-EYLHFGCSTPVIHCDL 540
E ++ E+M +GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
+ +N+L+ +++ ++DFG+A+++ ED T + I + AP
Sbjct: 311 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 354
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCRRAFKSFDVECEIMK 465
D F + ++GRGGFG V+ + M+ K++ L+ R+ ++ VE +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVA---S 522
+ R ++ + + + LV+ M G + H+Y+ + FQ + A S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLA-TI 580
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 581 GYMAP 585
G+MAP
Sbjct: 354 GFMAP 358
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
IG+G F V AR + G EVAVK+ + ++ F+ E IMK + H N++K
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 78
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ E+ LV+EY G + +L + + + R + SA++Y H
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKY 134
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIA 561
++H DLK N+LLD +M ++DFG +
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCRRAFKSFDVECEIMK 465
D F + ++GRGGFG V+ + M+ K++ L+ R+ ++ VE +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVA---S 522
+ R ++ + + + LV+ M G + H+Y+ + FQ + A S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLA-TI 580
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 581 GYMAP 585
G+MAP
Sbjct: 354 GFMAP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCRRAFKSFDVECEIMK 465
D F + ++GRGGFG V+ + M+ K++ L+ R+ ++ VE +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVA---S 522
+ R ++ + + + LV+ M G + H+Y+ + FQ + A S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLA-TI 580
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 581 GYMAP 585
G+MAP
Sbjct: 354 GFMAP 358
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVF--------NLQCRRAFKSFDVECEIMK 465
D F + ++GRGGFG V+ + M+ K++ L+ R+ ++ VE +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI---DVAS 522
+ R ++ + + + LV+ M G + H+Y+ + FQ + + S
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLA-TI 580
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ T+T+ A T
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTP 353
Query: 581 GYMAP 585
G+MAP
Sbjct: 354 GFMAP 358
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L +VAVKV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V ++ E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+++ + DFGIA+ + S+TQT + T Y+
Sbjct: 130 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 584 AP 585
+P
Sbjct: 187 SP 188
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 419 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
N +IGRG FG VY L G + AVK N + F E IMK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 474 KVISSCSNEEFKGLV-LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
++ C E LV L YM G L + + + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT--IGYMA 584
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAV++ + + + E IMK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH 469
R F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 470 -------------RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNI 516
RN +K +++ + + +EY G+L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
+ AL Y+H S +IH DLKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAV++ + + + E IMK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV+EY G + +L + + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
IG+G F V AR + G EVA+K+ + ++ F+ E IMK + H N++K
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 75
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ E+ L++EY G + +L + + + R + SA++Y H
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKR 131
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIA 561
++H DLK N+LLD +M ++DFG +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDVECEIMKSIRHR 470
+IG G FG V RL E+ V + L+ RR F S E IM H
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHP 90
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N+I + + + ++ EYM GSL+ L + + Q + ++ + S ++YL
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS-- 148
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 149 -DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQC-------RRAFKSFDVECEIMK 465
+ F NL+G+G F VY+A + G+EVA+K+ + + +R + C++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-- 68
Query: 466 SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALE 525
+H +++++ + + + LVLE G + ++L + + + M + + +
Sbjct: 69 --KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
YLH S ++H DL SN+LL NM ++DFG+A L
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L +VAVKV R + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V + E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+++ + DFGIA+ + S+TQT + T Y+
Sbjct: 130 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 584 AP 585
+P
Sbjct: 187 SP 188
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
IG+G F V AR + G EVA+K+ + ++ F+ E IMK + H N++K
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 78
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ E+ L++EY G + +L + + + R + SA++Y H
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKR 134
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIA 561
++H DLK N+LLD +M ++DFG +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 419 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFK-SFDVECEIMKSIRHRNLI 473
N ++G G FG VY+ G+ + VAVK C K F E IMK++ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+I EE +++E P G L +L L + + + + A+ YL S
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 195
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLI 473
+IG G FG V RL +VAV + L+ + + F E IM H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+ + + +V+E+M G+L+ L + + Q + ++ +A+ + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADM 164
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAP 585
+H DL N+L++ N++ +SDFG+++++ + +++ T T + + AP
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG+G G+VY A + G EVA++ NLQ + + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+EY+ GSL + T +D Q + + ALE+LH S VIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K N+LL + L+DFG + E QS T + T +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAP 186
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 420 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIK 474
+IG G FG V +L E+ V + L+ + + F E IM H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ + ++ E+M GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAP 585
+H DL N+L++ N++ +SDFG+++ L + T T L I + AP
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 419 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFK-SFDVECEIMKSIRHRNLI 473
N ++G G FG VY+ G+ + VAVK C K F E IMK++ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+I EE +++E P G L +L L + + + + A+ YL S
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 183
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 419 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDVECEIMKSIRHR 470
+IG G FG V RL E+ V + L+ RR F S E IM H
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHP 69
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N+I + + + ++ EYM GSL+ L + + Q + ++ + S ++YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS-- 127
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 128 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 422 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIKV 475
+G G FG V G G VAVK +S + E +I++++ H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 476 ISSCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
C + L V+EY+P GSL +L + + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
IH DL NVLLD++ + + DFG+AK
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRA---FKSFDVECEIMKSIR 468
+D + ++G GG V+ AR L +VAVKV R + F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 469 HRNLIKVISSCSNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL 524
H ++ V + E G +V+EY+ G + + T + + + ++ D AL
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+ H +IH D+KP+N+++ + DFGIA+ + S+TQT + T Y+
Sbjct: 147 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 584 AP 585
+P
Sbjct: 204 SP 205
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F IG G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EYMP G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F IG G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EYMP G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 419 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFK-SFDVECEIMKSIRHRNLI 473
N ++G G FG VY+ G+ + VAVK C K F E IMK++ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K+I EE +++E P G L +L L + + + + A+ YL S
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 179
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 163
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 219
Query: 585 P 585
P
Sbjct: 220 P 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 420 NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDVECEIMKSIRHRN 471
+IG G FG V RL E+ V + L+ RR F S E IM H N
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHPN 76
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
+I + + + ++ EYM GSL+ L + + Q + ++ + S ++YL
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--- 133
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+H DL N+L++ N++ +SDFG++++L + ++ T+
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 420 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVIS 477
LIG+G FG VY R EVA+++ +++ K+F E + RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+C + ++ +L + +LD+ + I ++ + YLH + ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILH 153
Query: 538 CDLKPSNVLLDDNMIAYLSDFGI 560
DLK NV D+ + ++DFG+
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 416 FSENNLIGRGGFGSVYKARL----GDGMEVAVKVF--NLQCRRAFKSFDVECEIMKSIRH 469
F+ ++G+G FGSV +A+L G ++VAVK+ ++ + F E MK H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 470 RNLIKVISSCSNEEFKG------LVLEYMPQGSLEKHLYSTNCILDIFQR-----LNIMI 518
++ K++ KG ++L +M G L L ++ + F + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568
D+A +EYL S IH DL N +L ++M ++DFG+++ + D
Sbjct: 145 DIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 150
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 206
Query: 585 P 585
P
Sbjct: 207 P 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 130
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 186
Query: 585 P 585
P
Sbjct: 187 P 187
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDVECEI--- 463
LCRA + IG G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 464 --MKSIRHRNLIKVISSCS----NEEFK-GLVLEYMPQGSLEKHL-------YSTNCILD 509
+++ H N++++ C+ + E K LV E++ Q L +L T I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 510 IFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569
+ M + L++LH S V+H DLKP N+L+ + L+DFG+A++ +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 570 SMTQTQTLATIGYMAP 585
M T + T+ Y AP
Sbjct: 174 -MALTSVVVTLWYRAP 188
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDVECEI--- 463
LCRA + IG G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 464 --MKSIRHRNLIKVISSCS----NEEFK-GLVLEYMPQGSLEKHL-------YSTNCILD 509
+++ H N++++ C+ + E K LV E++ Q L +L T I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 510 IFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569
+ M + L++LH S V+H DLKP N+L+ + L+DFG+A++ +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 570 SMTQTQTLATIGYMAP 585
M T + T+ Y AP
Sbjct: 174 -MALTSVVVTLWYRAP 188
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 127
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 183
Query: 585 P 585
P
Sbjct: 184 P 184
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 125
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 181
Query: 585 P 585
P
Sbjct: 182 P 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G FG V++ + G EVAVK+F+ R +S+ E EI +++ RH N++ I++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 480 SNEEFKG----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC---- 531
+ + LV +Y GSL +L ++ + + + AS L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 124
Query: 532 STPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA------TIGYMA 584
P I H DLK N+L+ N ++D G+A + D S T T +A T YMA
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMA 180
Query: 585 P 585
P
Sbjct: 181 P 181
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDVECEI--- 463
LCRA + IG G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 464 --MKSIRHRNLIKVISSCS----NEEFK-GLVLEYMPQGSLEKHL-------YSTNCILD 509
+++ H N++++ C+ + E K LV E++ Q L +L T I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 510 IFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569
+ M + L++LH S V+H DLKP N+L+ + L+DFG+A++ +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 570 SMTQTQTLATIGYMAP 585
M T + T+ Y AP
Sbjct: 174 -MALTSVVVTLWYRAP 188
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481
+G G FG V+ A +VAVK + ++F E +MK+++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASAL-EYLHFGCSTPVIHCDL 540
E ++ E+M +GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 541 KPSNVLLDDNMIAYLSDFGIAKL 563
+ +N+L+ +++ ++DFG+A++
Sbjct: 305 RAANILVSASLVCKIADFGLARV 327
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG VYKA+ + G A KV + + + VE EI+ + H ++K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
++ +++E+ P G+++ + + L Q I + LE L+F S +IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 541 KPSNVLLDDNMIAYLSDFGIA 561
K NVL+ L+DFG++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVS 156
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G +T TL T Y+AP
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAP 193
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G +T TL T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAP 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 420 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN 471
++G G +G V+ R G M+V K +Q + + E ++++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 472 LIKVISSCSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI-DVASALEYLHF 529
+ + E K L+L+Y+ G L HL + + I + ++ ALE+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH- 176
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ D+K N+LLD N L+DFG++K + D++ TI YMAP
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAP 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 31/198 (15%)
Query: 404 FSYLELC-RATDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDV 459
F + C R TD + +G+G F V + + E A K+ N + R + +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 460 ECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDI 510
E I + ++H N++++ S S E F LV + + G L + YS ++CI I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 511 FQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGE 567
+ +N ++H ++H DLKP N+LL L+DFG+A + GE
Sbjct: 140 LESVN----------HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 568 DQSMTQTQTLATIGYMAP 585
Q+ T GY++P
Sbjct: 187 QQAW--FGFAGTPGYLSP 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG VYKA+ + G A KV + + + VE EI+ + H ++K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
++ +++E+ P G+++ + + L Q I + LE L+F S +IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 541 KPSNVLLDDNMIAYLSDFGIA 561
K NVL+ L+DFG++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVS 164
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHRNLI 473
+ + IG GGF V A + G VA+K+ + + E E +K++RH+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ +VLEY P G L ++ S + + + R+ + + SA+ Y+H S
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQ 127
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP N+L D+ L DFG+ G QT ++ Y AP
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAP 178
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 254 RLPVKWMAP 262
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 413 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
+D + +G+G F V + G+E A K+ N + R F+ + E I + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S E F LV + + G L + YS ++CI I +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 139
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTL 577
++ Y H S ++H +LKP N+LL L+DFG+A I + S
Sbjct: 140 --SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 191
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 192 GTPGYLSP 199
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
TD + IG+G F V + +L G E A K+ N + R + + E I + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S S E F LV + + G L + YS ++CI I +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------- 114
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTL 577
A+ + H V+H DLKP N+LL L+DFG+A + G+ Q+
Sbjct: 115 --AVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--FGFA 167
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 414 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIM 464
D + +G G FG V K + + + VAVK+ + + E E+M
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 465 KSI-RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD--- 509
K I +H+N+I ++ +C+ + +++EY +G+L ++L Y N + +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 510 IFQRL-NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568
F+ L + +A +EYL S IH DL NVL+ +N + ++DFG+A+ + D
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 569 QSMTQTQTLATIGYMAP 585
T + +MAP
Sbjct: 258 YYKKTTNGRLPVKWMAP 274
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 420 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN 471
++G+GG+G V++ R G M+V K ++ + E I++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
++ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N++L+ L+DFG+ K I D ++T T TI YMAP
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHT-FCGTIEYMAP 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 202 RLPVKWMAP 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 205 RLPVKWMAP 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 213 RLPVKWMAP 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 212 RLPVKWMAP 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHRNLIKVISSC 479
+G G +G VYKA+ G VA+K L S + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
+E LV E+M + L+K L L Q I I + L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAP 188
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F IG G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 209 RLPVKWMAP 217
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 213 RLPVKWMAP 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHRNLIKVISSC 479
+G G +G VYKA+ G VA+K L S + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
+E LV E+M + L+K L L Q I I + L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAP 188
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 413 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
+D + +G+G F V + G+E A K+ N + R F+ + E I + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
N++++ S E F LV + + G L + + + + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAY 120
Query: 530 GCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S ++H +LKP N+LL L+DFG+A I + S T GY++P
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSP 176
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++EY +G+L ++L Y N + + F+ L +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 207 RLPVKWMAP 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
TD + +G+G F V + ++ G E A K+ N + R + + E I + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S S E F LV + + G L + YS ++CI I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ H ++H DLKP N+LL L+DFG+A + G+ Q+
Sbjct: 118 -----HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--FGFA 167
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G +GSVYKA G VA+K ++ + E IM+ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+V+EY GS+ + N L + I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K N+LL+ A L+DFG+A L D + + T +MAP
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAP 194
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L YS N + ++L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 206 RLPVKWMAP 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 200
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
TD + +G+G F V + ++ G E A K+ N + R + + E I + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S S E F LV + + G L + YS ++CI I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ H ++H DLKP N+LL L+DFG+A + G+ Q+
Sbjct: 118 -----HCHL---NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 413 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
+D + +G+G F V + G+E A K+ N + R F+ + E I + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S E F LV + + G L + YS ++CI I +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 116
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTL 577
++ Y H S ++H +LKP N+LL L+DFG+A I + S
Sbjct: 117 --SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 168
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 169 GTPGYLSP 176
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 413 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH 469
+D + +G+G F V + G+E A K+ N + R F+ + E I + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDV 520
N++++ S E F LV + + G L + YS ++CI I +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------- 115
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTL 577
++ Y H S ++H +LKP N+LL L+DFG+A I + S
Sbjct: 116 --SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 167
Query: 578 ATIGYMAP 585
T GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH 469
R F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 470 -------------RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNI 516
RN +K +++ + + +EY +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
+ AL Y+H S +IH DLKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVF-NLQCRRAFKSFDV-ECEIMKSIRHRNLIKVISS 478
IG G +G V+K R D G VA+K F + K + E ++K ++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQR---LNIMIDVA-SALEYLHFGCSTP 534
+ LV EY L + LD +QR +++ + L+ ++F
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH D+KP N+L+ + + L DFG A+LL G S +AT Y +P
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSP 171
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 228
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 24/179 (13%)
Query: 422 IGRGGFGSVYKARLG-DGMEVAVK----VFNL--QCRRAFKSFDVECEIMKSIRHRNLIK 474
IG G +G V AR G +VA+K F++ +R + E +I+K +H N+I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR----ELKILKHFKHDNIIA 118
Query: 475 VIS----SCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
+ + EFK + VL+ M + L + ++S+ L + + + L+Y+H
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMH 176
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE--DQSMTQTQTLATIGYMAP 585
S VIH DLKPSN+L+++N + DFG+A+ L + T+ +AT Y AP
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++ Y +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 24/187 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVK----VFNL--QCRRAFKSFDVECEIMKS 466
D + IG G +G V AR G +VA+K F++ +R + E +I+K
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR----ELKILKH 109
Query: 467 IRHRNLIKVIS----SCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+H N+I + + EFK + VL+ M + L + ++S+ L + + +
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQL 167
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE--DQSMTQTQTLA 578
L+Y+H S VIH DLKPSN+L+++N + DFG+A+ L + T+ +A
Sbjct: 168 LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 579 TIGYMAP 585
T Y AP
Sbjct: 225 TRWYRAP 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 200
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 422 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
+G G +GSV Y ARL +VAVK + + RR ++ E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 89
Query: 473 IKVIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
I ++ + S E+F + L G+ ++ + + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSNV ++++ + DFG+A+ D+ M T +AT Y AP
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 415 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMK-SIRHRNLI 473
F +++G G G++ + D +VAVK +C F D E ++++ S H N+I
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+ + + +F+ + +E + +L++++ + + + ++ S L +LH S
Sbjct: 82 RYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SL 137
Query: 534 PVIHCDLKPSNVLL-----DDNMIAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP N+L+ + A +SDFG+ KL +G ++ T G++AP
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 420 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIK 474
+IG G FG V +L E+ V + L+ + + F E IM H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ + ++ E+M GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAP 585
+H L N+L++ N++ +SDFG+++ L + T T L I + AP
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V ++ R +A K E
Sbjct: 43 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 160
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 161 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 581 GYMA 584
+MA
Sbjct: 218 KWMA 221
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L +S N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 213 RLPVKWMAP 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 581 GYMA 584
+MA
Sbjct: 188 KWMA 191
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 581 GYMA 584
+MA
Sbjct: 185 KWMA 188
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 581 GYMA 584
+MA
Sbjct: 186 KWMA 189
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 581 GYMA 584
+MA
Sbjct: 187 KWMA 190
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG VYKA+ + + A KV + + + + VE +I+ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 541 KPSNVLLDDNMIAYLSDFGIA 561
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 581 GYMA 584
+MA
Sbjct: 185 KWMA 188
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 469 ------HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVAS 522
H N++ ++ +C++ ++ EY G L L + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 523 ALEYLHFG----------CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
+ LHF S IH D+ NVLL + +A + DFG+A+ ++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 573 QTQTLATIGYMAP 585
+ + +MAP
Sbjct: 223 KGNARLPVKWMAP 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG VYKA+ + + A KV + + + + VE +I+ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 541 KPSNVLLDDNMIAYLSDFGIA 561
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG VYKA+ + + A KV + + + + VE +I+ S H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 541 KPSNVLLDDNMIAYLSDFGIA 561
K N+L + L+DFG++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS 182
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 476 ISS-------CSNEEFK-----GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+S+ C + F +L+ M G L HL + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LE++H + V++ DLKP+N+LLD++ +SD G+A + ++ T GYM
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 584 AP 585
AP
Sbjct: 358 AP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 476 ISS-------CSNEEFK-----GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+S+ C + F +L+ M G L HL + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LE++H + V++ DLKP+N+LLD++ +SD G+A + ++ T GYM
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 584 AP 585
AP
Sbjct: 358 AP 359
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 244
Query: 476 ISS-------CSNEEFK-----GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+S+ C + F +L+ M G L HL + R ++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 303
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LE++H + V++ DLKP+N+LLD++ +SD G+A + ++ T GYM
Sbjct: 304 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 356
Query: 584 AP 585
AP
Sbjct: 357 AP 358
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
FS + +IGRGGFG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 476 ISS-------CSNEEFK-----GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+S+ C + F +L+ M G L HL + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LE++H + V++ DLKP+N+LLD++ +SD G+A + ++ T GYM
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 584 AP 585
AP
Sbjct: 358 AP 359
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 412 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVA---VKVFNLQCRRAFKSFDVECEI---- 463
AT + IG G +G+VYKAR G VA V+V N E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 464 -MKSIRHRNLIKVISSC----SNEEFK-GLVLEYMPQGSLEKHL-YSTNCILDIFQRLNI 516
+++ H N+++++ C ++ E K LV E++ Q L +L + L ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
M L++LH C ++H DLKP N+L+ L+DFG+A++ M T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPV 179
Query: 577 LATIGYMAP 585
+ T+ Y AP
Sbjct: 180 VVTLWYRAP 188
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + + + VAVK+ + + E E+MK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----------YSTNCILD---IFQRL-NI 516
+I ++ +C+ + +++ Y +G+L ++L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+A +EYL S IH DL NVL+ +N + ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 220 RLPVKWMAP 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG+AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNL 472
++G+G FG V+ + G + A+KV L+ R ++ +E +I+ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+K+ + E L+L+++ G L L S + + ++A AL++LH S
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N+LLD+ L+DFG++K I D T+ YMAP
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAP 195
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG+AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 28/188 (14%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
F E LIG GGFG V+KA+ DG +K +A + E + + + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 475 VI----------------SSCSNEEFKGLVLEYMPQGSLEKHLYSTNC-ILDIFQRLNIM 517
SS S + + +E+ +G+LE+ + LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ ++Y+H S +I+ DLKPSN+ L D + DFG+ L + + + ++
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSK 182
Query: 578 ATIGYMAP 585
T+ YM+P
Sbjct: 183 GTLRYMSP 190
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 428 GSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN--EE 483
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 484 FKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNIMIDVASALEYLHFGCSTPVI-HCDLK 541
L+ +MP GSL L+ TN ++D Q + +D+A + +LH P+I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALN 140
Query: 542 PSNVLLDDNMIAYLS 556
+V++D++M A +S
Sbjct: 141 SRSVMIDEDMTARIS 155
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 420 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN 471
++G+GG+G V++ R G M+V K ++ + E I++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
++ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N++L+ L+DFG+ K I D ++T TI YMAP
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHX-FCGTIEYMAP 190
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +VLEY P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNL 472
++G+G FG V+ + G + A+KV L+ R ++ +E +I+ + H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 89
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+K+ + E L+L+++ G L L S + + ++A AL++LH S
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N+LLD+ L+DFG++K I D T+ YMAP
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAP 196
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV----AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNL 472
++G+G FG V+ + G + A+KV L+ R ++ +E +I+ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+K+ + E L+L+++ G L L S + + ++A AL++LH S
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N+LLD+ L+DFG++K I D T+ YMAP
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAP 195
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHRNLIKVISSC 479
IG G +G VYKA+ G A+K L+ S + E I+K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
++ LV E++ Q L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LKP N+L++ ++DFG+A+ + T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAP 169
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L Y N + ++L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 198 RLPVKWMAP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 422 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRN 471
+G G FG V K + +VAVK+ + E E+MK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHL---------YSTNCILDIFQRLN------I 516
+I ++ +C+ + +++EY +G+L ++L Y N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
VA +EYL S IH DL NVL+ ++ + ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 577 LATIGYMAP 585
+ +MAP
Sbjct: 213 RLPVKWMAP 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 26/192 (13%)
Query: 411 RATDGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDV------ 459
+T GF EN ++GRG V + E AVK+ ++ +F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 460 ---ECEIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQR-- 513
E +I++ + H N+I++ + F LV + M +G L +L + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
+ +++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 180
Query: 574 TQTLATIGYMAP 585
+ T Y+AP
Sbjct: 181 REVCGTPSYLAP 192
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 38/205 (18%)
Query: 416 FSENNL-----IGRGGFGSVYKARLGDGME------VAVKVFNLQCRRAFKS-FDVECEI 463
+ NN+ IG G FG V++AR + VAVK+ + ++ F E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS----TNC------------- 506
M + N++K++ C+ + L+ EYM G L + L S T C
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 507 ------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560
L ++L I VA+ + YL +H DL N L+ +NM+ ++DFG+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 561 AKLLIGEDQSMTQTQTLATIGYMAP 585
++ + D I +M P
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPP 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVY----KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNL 472
++G+G FG V+ R G A+KV L+ R ++ +E +I+ + H +
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFV 92
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+K+ + E L+L+++ G L L S + + ++A L++LH S
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLKP N+LLD+ L+DFG++K I D T+ YMAP
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAP 199
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHRNLIKVISSC 479
IG G +G VYKA+ G A+K L+ S + E I+K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
++ LV E++ Q L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LKP N+L++ ++DFG+A+ + T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAP 169
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHRNLIKVISSC 479
IG G +G VYKA+ G A+K L+ S + E I+K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539
++ LV E++ Q L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LKP N+L++ ++DFG+A+ + T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAP 169
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 422 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
+G G +GSV Y ARL +VAVK + + RR ++ E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 89
Query: 473 IKVIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
I ++ + S E+F + L G+ ++ + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSNV ++++ + DFG+A+ D+ M T +AT Y AP
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 127 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 179
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCRRAFKSFDVECEIMKSIRHRN 471
FS+ IG G FG+VY AR + + VA+K + Q ++ E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVAS----ALEYL 527
I+ E LV+EY L S + +L++ ++ +++A+ AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ S +IH D+K N+LL + + L DFG A ++
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 127 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 179
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 581 GYMA 584
+MA
Sbjct: 186 KWMA 189
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 581 GYMA 584
+MA
Sbjct: 187 KWMA 190
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 581 GYMA 584
+MA
Sbjct: 191 KWMA 194
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 581 GYMA 584
+MA
Sbjct: 187 KWMA 190
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 172
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLSFC 119
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 172
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 172
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVA---VKVFNLQCRRAFKS--------------- 456
F E LIG GGFG V+KA+ DG VK N + R K+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 457 ---FDVECEI----MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNC-IL 508
FD + E ++S + SS S + + +E+ +G+LE+ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 509 DIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568
D L + + ++Y+H S +IH DLKPSN+ L D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 569 QSMTQTQTLATIGYMAP 585
+ +T++ T+ YM+P
Sbjct: 191 K---RTRSKGTLRYMSP 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 173
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 124 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 176
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 581 GYMA 584
+MA
Sbjct: 187 KWMA 190
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 581 GYMA 584
+MA
Sbjct: 190 KWMA 193
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 152 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 581 GYMA 584
+MA
Sbjct: 209 KWMA 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 36/190 (18%)
Query: 411 RATDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCRR---AFKSFDVECEI-- 463
R T F E ++G G F V+ K RL K+F L+C + AF+ +E EI
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEIAV 59
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGS-----LEKHLYSTNCILDIFQRLNIMI 518
+K I+H N++ + + LV++ + G LE+ +Y+ + Q+
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----- 114
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
V SA++YLH ++H DLKP N+L ++N ++DFG++K+ +Q+ +
Sbjct: 115 -VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMST 166
Query: 576 TLATIGYMAP 585
T GY+AP
Sbjct: 167 ACGTPGYVAP 176
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 422 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
+G G +GSV Y ARL +VAVK + + RR ++ E ++K ++H N+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 81
Query: 473 IKVIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
I ++ + S E+F + L G+ ++ + D + ++ + L+Y+H
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 140
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSNV ++++ + DFG+A+ D+ M T +AT Y AP
Sbjct: 141 ---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--TGYVATRWYRAP 189
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 171
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 403 TFSYLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKS 456
+ L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K
Sbjct: 2 AMALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 60
Query: 457 FDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNI 516
E +M S+ + ++ +++ C + L+ + MP G L ++ + LN
Sbjct: 61 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 119
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
+ +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 120 CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 577 LATIGYMA 584
I +MA
Sbjct: 177 KVPIKWMA 184
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 581 GYMA 584
+MA
Sbjct: 186 KWMA 189
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 172
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 171
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 581 GYMA 584
+MA
Sbjct: 194 KWMA 197
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 581 GYMA 584
+MA
Sbjct: 186 KWMA 189
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 411 RATDGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDV------ 459
+T GF EN ++GRG V + E AVK+ ++ +F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 460 ---ECEIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQR-- 513
E +I++ + H N+I++ + F LV + M +G L +L + + R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
+ +++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 180
Query: 574 TQTLATIGYMAP 585
T Y+AP
Sbjct: 181 RSVCGTPSYLAP 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G +T LA T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAP 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCRRAFKSFDVECEIMKSIRHRN 471
FS+ IG G FG+VY AR + + VA+K + Q ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVAS----ALEYL 527
I+ E LV+EY L S + +L++ ++ +++A+ AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ S +IH D+K N+LL + + L DFG A ++
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 581 GYMA 584
+MA
Sbjct: 188 KWMA 191
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVECEIMKSIRH 469
F + ++G G FG+VYK + +G +V + V + R +A K E +M S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
++ +++ C + L+ + MP G L ++ + LN + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 128
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
++H DL NVL+ ++DFG+AKLL E++ I +MA
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEI-----MK 465
AT + IG G +G+VYKAR G VA+K + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 466 SIRHRNLIKVISSCS----NEEFK-GLVLEYMPQGSLEKHL-YSTNCILDIFQRLNIMID 519
+ H N+++++ C+ + E K LV E++ Q L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
L++LH C ++H DLKP N+L+ L+DFG+A++ M + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVT 174
Query: 580 IGYMAP 585
+ Y AP
Sbjct: 175 LWYRAP 180
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH 469
R F E ++G+G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 470 -------------RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNI 516
RN +K ++ + + EY +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
+ AL Y+H S +IH +LKP N+ +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG+G F V AR + G EVAVK+ + + + E I K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV EY G + +L + + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCH---QKFIVHR 137
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+LLD + ++DFG +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS 160
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G T TL T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAP 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISS- 478
+G+G +G V++ L G VAVK+F+ R +S+ E EI ++ RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 479 --CSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH---FGCS 532
N + L+ Y GSL L L+ L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 533 -TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLI-GEDQ-SMTQTQTLATIGYMAP 585
P I H D K NVL+ N+ ++D G+A + G D + + T YMAP
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
+++ IG G +G V A VA+K F Q C+R + E +I+ RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRH 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN-----IMIDVASAL 524
N+I + + + Y+ Q +E LY +L Q N + + L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGL 157
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE-DQSMTQTQTLATIGYM 583
+Y+H S V+H DLKPSN+L++ + DFG+A++ E D + T+ +AT Y
Sbjct: 158 KYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 584 AP 585
AP
Sbjct: 215 AP 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L K+ S + +V+EY P G + HL + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D+ ++DFG AK + G + T Y+AP
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 194
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 421 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
+IGRG FG V R +V A+K+ F + R F E +IM ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ ++ + +V+EYMP G L +L S + + + R +V AL+ +H S I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 190
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H D+KP N+LLD + L+DFG + E T + T Y++P
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 238
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ + RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRH 82
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 135
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 580 IGYMAP 585
Y AP
Sbjct: 193 RWYRAP 198
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 202
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 80
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 580 IGYMAP 585
Y AP
Sbjct: 191 RWYRAP 196
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++ G FG+VYK + +G +V + V + R +A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+++ MP G L ++ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 581 GYMA 584
+MA
Sbjct: 191 KWMA 194
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 421 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
+IGRG FG V R +V A+K+ F + R F E +IM ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ ++ + +V+EYMP G L +L S + + + R +V AL+ +H S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 195
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H D+KP N+LLD + L+DFG + E T + T Y++P
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+IGRG FG V R +V A+K+ F + R F E +IM ++++
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ ++++ +V+EYMP G L +L S + + + + +V AL+ +H S +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDL-VNLMSNYDVPEKWAKF-YTAEVVLALDAIH---SMGL 195
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAP 585
IH D+KP N+LLD + L+DFG + ++ M T + T Y++P
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISP 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 448 LQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFKGLVLEYMPQGSLEKHLYSTN 505
+Q R + E I+K + H N++K++ NE+ +V E + QG + + T
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--VPTL 131
Query: 506 CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565
L Q D+ +EYLH+ +IH D+KPSN+L+ ++ ++DFG++
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 566 GEDQSMTQTQTLATIGYMAP 585
G D + + T+ T +MAP
Sbjct: 189 GSDALL--SNTVGTPAFMAP 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ + RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRH 82
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 135
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 580 IGYMAP 585
Y AP
Sbjct: 193 RWYRAP 198
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 469 ------HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVAS 522
H N++ ++ +C++ ++ EY G L L + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 523 ALEYLHFG----------CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
+ LHF S IH D+ NVLL + +A + DFG+A+ ++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 573 QTQTLATIGYMAP 585
+ + +MAP
Sbjct: 223 KGNARLPVKWMAP 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAP 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 422 IGRGGFGSVYKARLGDGME-VAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G +G+V+KA+ + E VA+K L S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+++ LV E+ Q L+K+ S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAK 562
DLKP N+L++ N L+DFG+A+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLAR 149
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 415 GFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDV---------E 460
GF EN ++GRG V + E AVK+ ++ +F + +V E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 461 CEIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQR--LNIM 517
+I++ + H N+I++ + F LV + M +G L +L + + R + +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D +
Sbjct: 121 LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVC 171
Query: 578 ATIGYMAP 585
T Y+AP
Sbjct: 172 GTPSYLAP 179
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 137
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 580 IGYMAP 585
Y AP
Sbjct: 195 RWYRAP 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDL--KTFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 171
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 422 IGRGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRNLIKVISS 478
+G G + +VYK ++L D + VA+K L+ + E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E+ LV EY+ + L+++L I+++ + + L Y H V+H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAK 562
DLKP N+L+++ L+DFG+A+
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR 148
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEI-----MK 465
AT + IG G +G+VYKAR G VA+K + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 466 SIRHRNLIKVISSCS----NEEFK-GLVLEYMPQGSLEKHL-YSTNCILDIFQRLNIMID 519
+ H N+++++ C+ + E K LV E++ Q L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
L++LH C ++H DLKP N+L+ L+DFG+A++ M + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVT 174
Query: 580 IGYMAP 585
+ Y AP
Sbjct: 175 LWYRAP 180
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 80
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 580 IGYMAP 585
Y AP
Sbjct: 191 RWYRAP 196
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 421 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
+IGRG FG V R +V A+K+ F + R F E +IM ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ ++ + +V+EYMP G L +L S + + + R +V AL+ +H S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 195
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H D+KP N+LLD + L+DFG + E T + T Y++P
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 80
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 580 IGYMAP 585
Y AP
Sbjct: 191 RWYRAP 196
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 581 GYMA 584
+MA
Sbjct: 191 KWMA 194
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 581 GYMA 584
+MA
Sbjct: 186 KWMA 189
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR---LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR 470
+ F + IG G +G VYKAR G+ + + + + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR---LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR 470
+ F + IG G +G VYKAR G+ + + + + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T T + T+ Y AP
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 171
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++G G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLN------IMID 519
N+I +I + + E+ K + Y+ Q +E LY C Q L+ +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYKLLKC-----QHLSNDHICYFLYQ 136
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLA 578
+ L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +A
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 579 TIGYMAP 585
T Y AP
Sbjct: 194 TRWYRAP 200
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEI-----MK 465
AT + IG G +G+VYKAR G VA+K + E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 466 SIRHRNLIKVISSC----SNEEFK-GLVLEYMPQGSLEKHL-YSTNCILDIFQRLNIMID 519
+ H N+++++ C ++ E K LV E++ Q L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
L++LH C ++H DLKP N+L+ L+DFG+A++ M + T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVT 174
Query: 580 IGYMAP 585
+ Y AP
Sbjct: 175 LWYRAP 180
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 78
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 79 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 131
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 580 IGYMAP 585
Y AP
Sbjct: 189 RWYRAP 194
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
IG G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 147
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAP 196
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 421 LIGR-GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
+IG G FG VYKA+ + + A KV + + + + VE +I+ S H N++K++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
E +++E+ G+++ + L Q + AL YLH +IH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 539 DLKPSNVLLDDNMIAYLSDFGIA 561
DLK N+L + L+DFG++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVS 155
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 85
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 86 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 138
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 580 IGYMAP 585
Y AP
Sbjct: 196 RWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 86
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 87 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 139
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 140 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 580 IGYMAP 585
Y AP
Sbjct: 197 RWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 77
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 78 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 130
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 131 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 580 IGYMAP 585
Y AP
Sbjct: 188 RWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 137
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 580 IGYMAP 585
Y AP
Sbjct: 195 RWYRAP 200
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 78
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 79 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 131
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 580 IGYMAP 585
Y AP
Sbjct: 189 RWYRAP 194
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 121
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 122 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 176
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 82
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 135
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 580 IGYMAP 585
Y AP
Sbjct: 193 RWYRAP 198
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 88
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 89 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 141
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 142 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 580 IGYMAP 585
Y AP
Sbjct: 199 RWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 80
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 580 IGYMAP 585
Y AP
Sbjct: 191 RWYRAP 196
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ------CRRAFKSFDVECEI--M 464
D + + +G G G V A +VA+K+ + + R A + +VE EI +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMI 518
K + H +IK+ + E++ +VLE M G L K L C L +Q L
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 130
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE M +
Sbjct: 131 ---LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---R 180
Query: 576 TL-ATIGYMAP 585
TL T Y+AP
Sbjct: 181 TLCGTPTYLAP 191
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 80
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 580 IGYMAP 585
Y AP
Sbjct: 191 RWYRAP 196
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ------CRRAFKSFDVECEI--M 464
D + + +G G G V A +VA+K+ + + R A + +VE EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMI 518
K + H +IK+ + E++ +VLE M G L K L C L +Q L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE M +
Sbjct: 125 ---LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---R 174
Query: 576 TL-ATIGYMAP 585
TL T Y+AP
Sbjct: 175 TLCGTPTYLAP 185
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
++ N IGRG +G V A + G + A K F E EIMKS+ H N+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ + + LV+E G L + + + IM DV SA+ Y H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCH---KLN 126
Query: 535 VIHCDLKPSNVL-LDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V H DLKP N L L D+ + L DFG+A + M +T+ + T Y++P
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSP 177
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ------CRRAFKSFDVECEI--M 464
D + + +G G G V A +VA+K+ + + R A + +VE EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMI 518
K + H +IK+ + E++ +VLE M G L K L C L +Q L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE M +
Sbjct: 125 ---LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---R 174
Query: 576 TL-ATIGYMAP 585
TL T Y+AP
Sbjct: 175 TLCGTPTYLAP 185
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 100
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 101 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 153
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 154 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 580 IGYMAP 585
Y AP
Sbjct: 211 RWYRAP 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ------CRRAFKSFDVECEI--M 464
D + + +G G G V A +VA+K+ + + R A + +VE EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMI 518
K + H +IK+ + E++ +VLE M G L K L C L +Q L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE M +
Sbjct: 125 ---LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---R 174
Query: 576 TL-ATIGYMAP 585
TL T Y+AP
Sbjct: 175 TLCGTPTYLAP 185
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ------CRRAFKSFDVECEI--M 464
D + + +G G G V A +VA+K+ + + R A + +VE EI +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMI 518
K + H +IK+ + E++ +VLE M G L K L C L +Q L
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---- 123
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE M +
Sbjct: 124 ---LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---R 173
Query: 576 TL-ATIGYMAP 585
TL T Y+AP
Sbjct: 174 TLCGTPTYLAP 184
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 416 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK 474
++ N IGRG +G V A + G + A K F E EIMKS+ H N+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ + + LV+E G L + + + IM DV SA+ Y H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCH---KLN 143
Query: 535 VIHCDLKPSNVL-LDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V H DLKP N L L D+ + L DFG+A + M +T+ + T Y++P
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSP 194
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 173
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 174
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 96
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 153
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 154 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAP 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSC 479
IG+G +G V+ + G +VAVKVF A S+ E EI +++ RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF-FTTEEA--SWFRETEIYQTVLMRHENILGFIAA- 99
Query: 480 SNEEFKG--------LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH--- 528
+ KG L+ +Y GSL +L ST LD L + S L +LH
Sbjct: 100 ---DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 529 FGCS-TPVI-HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE--DQSMTQTQTLATIGYMA 584
F P I H DLK N+L+ N ++D G+A I + + + + T YM
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 585 P 585
P
Sbjct: 215 P 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N++K++ E LV E++ Q K + + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 119
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 174
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 147
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAP 196
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 173
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++ G FG+VYK + +G +V + V + R +A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 581 GYMA 584
+MA
Sbjct: 191 KWMA 194
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
N++K++ E LV E++ Q K + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 171
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 417 SENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
S+ ++G G FG V+K G+++A K+ + + + E +M + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ ++ LV+EY+ G L + + L + M + + ++H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYI 208
Query: 536 IHCDLKPSNVL---LDDNMIAYLSDFGIAK 562
+H DLKP N+L D I + DFG+A+
Sbjct: 209 LHLDLKPENILCVNRDAKQIKII-DFGLAR 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 173
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIRHR 470
+ F + IG G +G VYKAR G VA+K L S + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYL 527
N++K++ E LV E++ Q L+K + + T L + + + + + L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 171
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 149
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 149
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRN 471
D + +IG G V A E VA+K NL+ C+ + E + M H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGS---LEKHLYST----NCILDIFQRLNIMIDVASAL 524
++ +S ++ LV++ + GS + KH+ + + +LD I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQT--LATIG 581
EYLH IH D+K N+LL ++ ++DFG++ L G D + + + + T
Sbjct: 130 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 582 YMAP 585
+MAP
Sbjct: 187 WMAP 190
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLIK 474
+G G FG V A G +VA+K+ N ++ D++ I + I RH ++IK
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 475 VISSCSNEEFKGLVLEY----MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+ +++ +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH-- 129
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP N+LLD+++ ++DFG++ ++ D + +T + + Y AP
Sbjct: 130 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 180
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLIK 474
+G G FG V A G +VA+K+ N ++ D++ I + I RH ++IK
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 475 VISSCSNEEFKGLVLEY----MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+ +++ +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH-- 130
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP N+LLD+++ ++DFG++ ++ D + +T + + Y AP
Sbjct: 131 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 181
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGXVATRWYRAP 191
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N++K++ E LV E++ Q K + + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPL-IKSYLFQLLQGLA 120
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N++K++ E LV E++ Q K + + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KDFMDASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDVE 460
L + + T+ F + ++ G FG+VYK + +G +V + V + R +A K E
Sbjct: 9 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 461 CEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+M S+ + ++ +++ C + L+ + MP G L ++ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 581 GYMA 584
+MA
Sbjct: 184 KWMA 187
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLIK 474
+G G FG V A G +VA+K+ N ++ D++ I + I RH ++IK
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 475 VISSCSNEEFKGLVLEY----MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+ +++ +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH-- 120
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP N+LLD+++ ++DFG++ ++ D + +T + + Y AP
Sbjct: 121 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 171
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 412 ATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRH 469
++ F + +G G + +VYK G+ VA+K L S + E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNC----------ILDIFQRLNIMID 519
N++++ E LV E+M L+K++ S ++ FQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ------- 114
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
L+ L F ++H DLKP N+L++ L DFG+A+
Sbjct: 115 -WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 149
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 144
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 145 -SADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWYRAP 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLIK 474
+G G FG V A G +VA+K+ N ++ D++ I + I RH ++IK
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 475 VISSCSNEEFKGLVLEY----MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+ +++ +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH-- 124
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H DLKP N+LLD+++ ++DFG++ ++ D + +T + + Y AP
Sbjct: 125 -RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 175
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-RRAFKSFDVECEI--MKSIRHRNLIKVIS 477
+G G FG V A +VA+K + Q +++ VE EI +K +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V+EY G L ++ + + R + A+EY H ++H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHKIVH 131
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLL 564
DLKP N+LLDDN+ ++DFG++ ++
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALE 525
H N++K++ E LV E++ Q L+K + + T L + + + + + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566
S +I+ DLKP N+L+D ++DFG AK + G
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 133
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 148
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 149 -SADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWYRAP 197
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 83
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 84 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 140
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 141 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 189
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 138
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 187
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 104
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 161
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRN 471
D + +IG G V A E VA+K NL+ C+ + E + M H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGS---LEKHLYST----NCILDIFQRLNIMIDVASAL 524
++ +S ++ LV++ + GS + KH+ + + +LD I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQT--LATIG 581
EYLH IH D+K N+LL ++ ++DFG++ L G D + + + + T
Sbjct: 135 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 582 YMAP 585
+MAP
Sbjct: 192 WMAP 195
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA++ F Q C+R + E +I+ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 137
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 580 IGYMAP 585
Y AP
Sbjct: 195 RWYRAP 200
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 162
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 211
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 82
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 139
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 188
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 108
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 165
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 144
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 193
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 144
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 193
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 82
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 139
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 188
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 154
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 203
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 154
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 144
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 193
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 154
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 203
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 147
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 196
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRH 469
D F +G G FG V + + G A+K+ + Q K + E I++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
L+K+ S + +V+EY+ G + HL + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +I+ DLKP N+++D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 96
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 153
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 154 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 202
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 84
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 85 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 141
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 142 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 190
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 149
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 198
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 148
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 197
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 147
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 196
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 47/201 (23%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCRRAFKSFDVECEI 463
+ F +L+G G +G V A G VA+K +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---STNCILD------IFQRL 514
+K +H N+I + + + F+ Y+ Q ++ L+ ST + D I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL---------- 564
A++ LH + VIH DLKPSN+L++ N + DFG+A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 565 IGEDQSMTQTQTLATIGYMAP 585
G+ M T+ +AT Y AP
Sbjct: 173 TGQQSGM--TEXVATRWYRAP 191
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 100
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN-----------IMI 518
N+I + N+ + +E M L HL D+++ L +
Sbjct: 101 ENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGA----DLYKLLKTQHLSNDHICYFLY 151
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTL 577
+ L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 578 ATIGYMAP 585
AT Y AP
Sbjct: 209 ATRWYRAP 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 30/179 (16%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISS 478
+G+G F V + ++ G E A K+ N + R + + E I + ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 479 CSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMIDVASALEYLHF 529
S E L+ + + G L + YS ++CI I + A+ + H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE----------AVLHCH- 138
Query: 530 GCSTPVIHCDLKPSNVLLDDNM---IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V+H DLKP N+LL + L+DFG+A + GE Q+ T GY++P
Sbjct: 139 --QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSP 193
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAP 174
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 127
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAP 179
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAP 174
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAP 174
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAP 174
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G FG V + A G + VAVK L A F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHL--YSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAP 585
IH DL N+LL + + DFG+ + L +D + Q + AP
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAP 174
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 148
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
F++ IG+G FG V+K +V A K D+E + + I V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVV----------AIKIIDLEEAEDEIEDIQQEITV 74
Query: 476 ISSCSNE---EFKG---------LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+S C + ++ G +++EY+ GS L + D FQ ++ ++
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKG 132
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
L+YLH S IH D+K +NVLL + L+DFG+A L D + + + T +M
Sbjct: 133 LDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 187
Query: 584 AP 585
AP
Sbjct: 188 AP 189
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + + + V+EY G L HL + R ++ SALEYLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 125
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S V++ D+K N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAP 177
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 47/201 (23%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCRRAFKSFDVECEI 463
+ F +L+G G +G V A G VA+K +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---STNCILD------IFQRL 514
+K +H N+I + + + F+ Y+ Q ++ L+ ST + D I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL---------- 564
A++ LH + VIH DLKPSN+L++ N + DFG+A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 565 IGEDQSMTQTQTLATIGYMAP 585
G+ M T+ +AT Y AP
Sbjct: 173 TGQQSGM--TEYVATRWYRAP 191
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 422 IGRGGFGSVYKARLGDGME-VAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G +G+V+KA+ + E VA+K L S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+++ LV E+ Q L+K+ S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAK 562
DLKP N+L++ N L++FG+A+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLAR 149
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV + + G+++AVK + + +R ++ E ++K ++H N+I
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 114
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 171
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 458 DVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIF 511
+ E EI+K + H +IK+ + E++ +VLE M G L K L C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 512 QRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGED 568
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 309
Query: 569 QSMTQTQTL-ATIGYMAP 585
M +TL T Y+AP
Sbjct: 310 SLM---RTLCGTPTYLAP 324
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 458 DVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIF 511
+ E EI+K + H +IK+ + E++ +VLE M G L K L C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 512 QRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGED 568
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 295
Query: 569 QSMTQTQTL-ATIGYMAP 585
M +TL T Y+AP
Sbjct: 296 SLM---RTLCGTPTYLAP 310
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+ + D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEM--TGYVATRWYRAP 191
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N++K++ E LV E++ S++ + L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G G E A K + RR ++E E I++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
IRH N+I + N+ L+LE + G L L + + + + + + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 130
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + L DFGIA
Sbjct: 131 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G G E A K + RR ++E E I++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
IRH N+I + N+ L+LE + G L L + + + + + + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 144
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + L DFGIA
Sbjct: 145 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 137
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + + +AT
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 580 IGYMAP 585
Y AP
Sbjct: 195 RWYRAP 200
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CRRAFKSFDVECEIMKSIRH 469
++ + IG G +G V A + + VA+K F Q C+R + E +I+ RH
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 85
Query: 470 RNLI---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDV 520
N+I +I + + E+ K + Y+ Q +E LY L Q L+ + +
Sbjct: 86 ENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQI 138
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLAT 579
L+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + + +AT
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 580 IGYMAP 585
Y AP
Sbjct: 196 RWYRAP 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N++K++ E LV E++ S++ + L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 173
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G G E A K + RR ++E E I++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
IRH N+I + N+ L+LE + G L L + + + + + + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 123
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + L DFGIA
Sbjct: 124 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 104
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 161
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 210
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 162
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRR-AFKSFDVECEIMKSIR 468
R F +GRGGFG V++A+ D A+K L R A + E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---------------STNCILDIFQR 513
H +++ N + E + S + +LY + C ++ +R
Sbjct: 62 HPGIVRYF----NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 514 ---LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
L+I + +A A+E+LH S ++H DLKPSN+ + + + DFG+ + +++
Sbjct: 118 SVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 571 MT----------QTQTLATIGYMAP 585
T T + T YM+P
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSP 199
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 138
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 187
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 406 YLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSF-DVECEI 463
Y + + F++ IG+G FG V+K +V A+K+ +L+ E +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+ + K S + +++EY+ GS L LD Q I+ ++
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 136
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
L+YLH S IH D+K +NVLL ++ L+DFG+A L D + + + T +M
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 191
Query: 584 AP 585
AP
Sbjct: 192 AP 193
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 95
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 152
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 153 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 201
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 383 RQRGKQ-PSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGME- 440
+Q G+Q + ++ P +M R S ++ D + +LIG G +G V +A D +E
Sbjct: 24 QQEGQQRKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHVCEA--YDKLEK 78
Query: 441 --VAVK----VFN--LQCRRAFKSFDVECEIMKSIRHRNLIKVIS---SCSNEEFKGLVL 489
VA+K VF + C+R + E I+ + H +++KV+ E+F L +
Sbjct: 79 RVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD 549
S K L+ T L ++ ++ ++Y+H S ++H DLKP+N L++
Sbjct: 135 VLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQ 191
Query: 550 NMIAYLSDFGIAKLL 564
+ + DFG+A+ +
Sbjct: 192 DCSVKVCDFGLARTV 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 416 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDVECE 462
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 463 IMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--------------- 507
++K + H ++IK+ +CS + L++EY GSL L + +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 508 --------LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
L + ++ ++ ++YL ++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 560 IAKLLIGEDQSMTQTQTLATIGYMA 584
+++ + ED + ++Q + +MA
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 416 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDVECE 462
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 463 IMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--------------- 507
++K + H ++IK+ +CS + L++EY GSL L + +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 508 --------LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
L + ++ ++ ++YL ++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 560 IAKLLIGEDQSMTQTQTLATIGYMA 584
+++ + ED + ++Q + +MA
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLE-KHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K++ E LV E++ S++ K + + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGL 119
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + D+G+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 416 FSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRHRN 471
F + ++G+GGFG V ++ G A K + + K + E +I++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFG 530
++ + + ++ LVL M G L+ H+Y + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+++ DLKP N+LLDD+ +SD G+A + + E Q++ + T+GYMAP
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP 354
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRNLI 473
++ + IG G +G V A + + VA+K + + + + E +I+ RH N+I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 474 ---KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IMIDVASAL 524
+I + + E+ K + Y+ Q +E LY L Q L+ + + L
Sbjct: 89 GINDIIRAPTIEQMKDV---YIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGL 141
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL-IGEDQSMTQTQTLATIGYM 583
+Y+H S V+H DLKPSN+LL+ + DFG+A++ D + T+ +AT Y
Sbjct: 142 KYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 584 AP 585
AP
Sbjct: 199 AP 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-RAFKSFDV-ECEIMKSIR 468
+ + F + IG G +G VYKAR G VA+K L S + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLE-KHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K++ E LV E++ S++ K + + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGL 118
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
F S V+H DLKP N+L++ L+DFG+A+ T + T+ Y AP
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 174
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 416 FSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRHRN 471
F + ++G+GGFG V ++ G A K + + K + E +I++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFG 530
++ + + ++ LVL M G L+ H+Y + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+++ DLKP N+LLDD+ +SD G+A + + E Q++ + T+GYMAP
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP 354
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 416 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDVECE 462
F NL+ G G FG V KA R G VAVK+ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 463 IMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--------------- 507
++K + H ++IK+ +CS + L++EY GSL L + +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 508 --------LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
L + ++ ++ ++YL ++H DL N+L+ + +SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 560 IAKLLIGEDQSMTQTQTLATIGYMA 584
+++ + ED + ++Q + +MA
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 419 NNLIGRGGFGSVYKARLGDG----MEVAVKVFN-LQCRRAFKSFDVECEIMKSIRHRNLI 473
+ +IG+G FG VY D ++ A+K + + + ++F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 474 KVIS-SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+I E ++L YM G L + + S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
+H DL N +LD++ ++DFG+A+ ++ + Q A +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 148
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 197
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 10/171 (5%)
Query: 420 NLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLI 473
++G G FG+VYK + DG + VA+KV +A K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+++ C + LV + MP G L H+ L LN + +A + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
++H DL NVL+ ++DFG+A+LL ++ I +MA
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHRNLIKVI 476
+G G FGSV Y+ R ++VA+KV +A + E +IM + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C E LV+E G L K L + + ++ V+ ++YL +
Sbjct: 77 GVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
H DL NVLL + A +SDFG++K L +D T
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSF-DVECEIMKSIRHRNLI 473
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH---SE 123
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH D+K +NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 173
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-LIYQILRGLKYIH-- 138
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M T +AT Y AP
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAP 187
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSIRHRNLIKVIS 477
+G G FG V+ R +G A+KV + K + E ++ + H +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ + + ++++Y+ G L L + + + +V ALEYLH S +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 538 CDLKPSNVLLDDNMIAYLSDFGIAKLL 564
DLKP N+LLD N ++DFG AK +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSF-DVECEIMKSIRHRNLI 473
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH---SE 138
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH D+K +NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 188
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 108
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 165
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M +AT Y AP
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--XGYVATRWYRAP 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMK------S 466
D F ++G+G FG V AR+ + G AVKV L+ + DVEC + + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLA 80
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
H L ++ + V+E++ G L H+ + + R ++ SAL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH +I+ DLK NVLLD L+DFG+ K I +T T Y+AP
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAP 193
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSF-DVECEIMKSIRHRNLI 473
F++ IG+G FG V+K +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH---SE 123
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH D+K +NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 173
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 409 LCRATDGFSEN--NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS 466
LC+ +G SE +I + F K R D N + + E ++KS
Sbjct: 54 LCKEKNGHSEKAIKVIKKSQFD---KGRYSDD--------NKNIEKFHEEIYNEISLLKS 102
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ H N+IK+ ++++ LV E+ G L + + + + D NIM + S + Y
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICY 161
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LH ++H D+KP N+LL++ + + DFG++ + L T Y+
Sbjct: 162 LH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---SKDYKLRDRLGTAYYI 215
Query: 584 AP 585
AP
Sbjct: 216 AP 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 43/199 (21%)
Query: 413 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCRRAFKSFDVECEI 463
+ F +L+G G +G V A G VA+K +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---STNCILD------IFQRL 514
+K +H N+I + + + F+ Y+ Q ++ L+ ST + D I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL---IGEDQSM 571
A++ LH + VIH DLKPSN+L++ N + DFG+A+++ ++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 572 TQTQT-----LATIGYMAP 585
T Q+ +AT Y AP
Sbjct: 173 TGQQSGMVEFVATRWYRAP 191
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 27/214 (12%)
Query: 394 NMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARL-----GDGME-VAVKVFN 447
MPL+ + E+ + F E +G FG VYK L G+ + VA+K
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 448 LQCRRAFKS-FDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLY---- 502
+ + F E + ++H N++ ++ + ++ ++ Y G L + L
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 503 -----------STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM 551
+ L+ ++++ +A+ +EYL S V+H DL NVL+ D +
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182
Query: 552 IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+SD G+ + + D +L I +MAP
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFDVECEIMK 465
L++ + F + ++G+G FG V+ A + A+K L+ DVEC +++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 68
Query: 466 ------SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMID 519
+ H L + + +E V+EY+ G L H+ S + D+ + +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAE 127
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL-LIGEDQSMTQTQTLA 578
+ L++LH S +++ DLK N+LLD + ++DFG+ K ++G+ ++ +
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCG 181
Query: 579 TIGYMAP 585
T Y+AP
Sbjct: 182 TPDYIAP 188
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV----ECEI 463
C + + IG+G FG V+KAR G +VA+K ++ + + F + E +I
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 464 MKSIRHRNLIKVISSCSNE-----EFKG---LVLEYMPQGSLEKHLYSTNCILDIFQRLN 515
++ ++H N++ +I C + KG LV ++ + L L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR 129
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL--LIGEDQSMTQ 573
+M + + L Y+H ++H D+K +NVL+ + + L+DFG+A+ L Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 574 TQTLATIGYMAP 585
+ T+ Y P
Sbjct: 187 XNRVVTLWYRPP 198
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 162
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M +AT Y AP
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--XGXVATRWYRAP 211
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSI 467
+D + ++G+G FG V K ++ G E AVKV + ++ + +S E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 528 HFGCSTPVIHCDLKPSNVLLD----DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
H ++H DLKP N+LL+ D I + DFG++ + S + T Y+
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRII-DFGLSTHF---EASKKMKDKIGTAYYI 218
Query: 584 AP 585
AP
Sbjct: 219 AP 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 39/193 (20%)
Query: 422 IGRGGFGSVYKA---RLGDGMEVAVKVFN-----LQCRRAFKSFDVECEIMKSIRHRNLI 473
+G+G +G V+K+ R G+ + V K+F+ +R F+ + E+ H N++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-KIFDAFQNSTDAQRTFREIMILTELSG---HENIV 72
Query: 474 KVIS--SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
+++ N+ LV +YM + H IL+ + ++ + ++YLH G
Sbjct: 73 NLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-------------------EDQSMT 572
++H D+KPSN+LL+ ++DFG+++ + +D
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 573 QTQTLATIGYMAP 585
T +AT Y AP
Sbjct: 187 LTDYVATRWYRAP 199
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSI 467
+D + ++G+G FG V K ++ G E AVKV + ++ + +S E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 528 HFGCSTPVIHCDLKPSNVLLD----DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
H ++H DLKP N+LL+ D I + DFG++ + S + T Y+
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRII-DFGLSTHF---EASKKMKDKIGTAYYI 201
Query: 584 AP 585
AP
Sbjct: 202 AP 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSI 467
+D + ++G+G FG V K ++ G E AVKV + ++ + +S E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 528 HFGCSTPVIHCDLKPSNVLLD----DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
H ++H DLKP N+LL+ D I + DFG++ + S + T Y+
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRII-DFGLSTHF---EASKKMKDKIGTAYYI 219
Query: 584 AP 585
AP
Sbjct: 220 AP 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV----ECEI 463
C + + IG+G FG V+KAR G +VA+K ++ + + F + E +I
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 69
Query: 464 MKSIRHRNLIKVISSCSNE-----EFKG---LVLEYMPQGSLEKHLYSTNCILDIFQRLN 515
++ ++H N++ +I C + KG LV ++ + L L + + +
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR 128
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL--LIGEDQSMTQ 573
+M + + L Y+H ++H D+K +NVL+ + + L+DFG+A+ L Q
Sbjct: 129 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 574 TQTLATIGYMAP 585
+ T+ Y P
Sbjct: 186 XNRVVTLWYRPP 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSI 467
+D + ++G+G FG V K ++ G E AVKV + ++ + +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 528 HFGCSTPVIHCDLKPSNVLLD----DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
H ++H DLKP N+LL+ D I + DFG++ + S + T Y+
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRII-DFGLSTHF---EASKKMKDKIGTAYYI 195
Query: 584 AP 585
AP
Sbjct: 196 AP 197
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV----ECEI 463
C + + IG+G FG V+KAR G +VA+K ++ + + F + E +I
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 464 MKSIRHRNLIKVISSCSNE-----EFKG---LVLEYMPQGSLEKHLYSTNCILDIFQRLN 515
++ ++H N++ +I C + KG LV ++ + L L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR 129
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL--LIGEDQSMTQ 573
+M + + L Y+H ++H D+K +NVL+ + + L+DFG+A+ L Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 574 TQTLATIGYMAP 585
+ T+ Y P
Sbjct: 187 XNRVVTLWYRPP 198
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHRNLIKVI 476
+G G FGSV Y+ R ++VA+KV +A + E +IM + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
C E LV+E G L K L + + ++ V+ ++YL +
Sbjct: 403 GVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
H +L NVLL + A +SDFG++K L +D T
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + FG+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 138
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M +AT Y AP
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWYRAP 187
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 422 IGRGGFG-SVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISS 478
IG G FG ++ DG + +K N+ + + E ++ +++H N+++ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQR---LNIMIDVASALEYLHFGCSTPV 535
+V++Y G L K + + +L FQ L+ + + AL+++H +
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH---DRKI 146
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+H D+K N+ L + L DFGIA++L
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 31/182 (17%)
Query: 421 LIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-------RHRNL 472
L+G G +G VYK R + G A+KV ++ + D E EI + I HRN+
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV-------TGDEEEEIKQEINMLKKYSHHRNI 83
Query: 473 IKVISSCSNEEFKG------LVLEYMPQGSLEKHLYST--NCILDIFQRLNIMIDVASAL 524
+ + G LV+E+ GS+ + +T N + + + I ++ L
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-ICREILRGL 142
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQT-LATIGYM 583
+LH VIH D+K NVLL +N L DFG++ L D+++ + T + T +M
Sbjct: 143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWM 196
Query: 584 AP 585
AP
Sbjct: 197 AP 198
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWYRAP 191
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + D G+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DFG+A+ D M +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWYRAP 191
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + D G+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 411 RATDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSI 467
R T+ + +G+G F V + ++ G E A + N + R + + E I + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYS----TNCILDIFQRLNIMI 518
+H N++++ S S E L+ + + G L + YS ++CI I +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE------ 121
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM---IAYLSDFGIAKLLIGEDQSMTQTQ 575
A+ + H V+H +LKP N+LL + L+DFG+A + GE Q+
Sbjct: 122 ----AVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA 174
Query: 576 TLATIGYMAP 585
T GY++P
Sbjct: 175 --GTPGYLSP 182
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 428 GSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN--EE 483
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 484 FKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNIMIDVASALEYLHFGCSTPVI-HCDLK 541
L+ + P GSL L+ TN ++D Q + +D A +LH P+I L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALN 140
Query: 542 PSNVLLDDNMIAYLS 556
+V +D++ A +S
Sbjct: 141 SRSVXIDEDXTARIS 155
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G+ VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + D G+A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A G +VAVK +L+ ++ + E IM+ H N++ + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL YLH + VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAP 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 469 ------HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI---------LDIFQR 513
H N++ ++ +C++ ++ EY G L L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
L+ VA + +L S IH D+ NVLL + +A + DFG+A+ ++ + + +
Sbjct: 155 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 574 TQTLATIGYMAP 585
+ +MAP
Sbjct: 212 GNARLPVKWMAP 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFDVECEIMK 465
L++ + F + ++G+G FG V+ A + A+K L+ DVEC +++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 67
Query: 466 ------SIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMID 519
+ H L + + +E V+EY+ G L H+ S + D+ + +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAE 126
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL-LIGEDQSMTQTQTLA 578
+ L++LH S +++ DLK N+LLD + ++DFG+ K ++G+ ++
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCG 180
Query: 579 TIGYMAP 585
T Y+AP
Sbjct: 181 TPDYIAP 187
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 413 TDGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR 468
TDG+ IG G + ++KA ME AVK+ + R + ++ +++ +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N+I + + ++ +V E M G L + + + ++ + +EYLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH 133
Query: 529 FGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAKLLIGED 568
+ V+H DLKPSN+L D + DFG AK L E+
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 413 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN 471
+D F + +GRG VY+ + G A+KV + K E ++ + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASALEY 526
+IK+ LVLE + G L EK YS D ++ + A+ Y
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAY 163
Query: 527 LHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LH ++H DLKP N+L + ++DFG++K++ E Q + +T T GY
Sbjct: 164 LH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYC 217
Query: 584 AP 585
AP
Sbjct: 218 AP 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 406 YLELCRATDGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCRRAFKSFDVEC 461
Y + +DG+ IG G + V+KA ME AVKV + R + ++
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIEI-- 73
Query: 462 EIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVA 521
+++ +H N+I + + + LV E M G L + + ++ +
Sbjct: 74 -LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIG 131
Query: 522 SALEYLHFGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAKLLIGED 568
+EYLH S V+H DLKPSN+L D + DFG AK L E+
Sbjct: 132 KTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 422 IGRGGFGSVYKARL-----GDGME-VAVKVFNLQCRRAFKS-FDVECEIMKSIRHRNLIK 474
+G FG VYK L G+ + VA+K + + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLY---------------STNCILDIFQRLNIMID 519
++ + ++ ++ Y G L + L + L+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
+A+ +EYL S V+H DL NVL+ D + +SD G+ + + D +L
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 580 IGYMAP 585
I +MAP
Sbjct: 194 IRWMAP 199
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G VAVK + + +R ++ E ++K ++H N+I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 475 VIS----SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
++ + S EEF + L G+ ++ + D + ++ + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH-- 142
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+ ++++ + DF +A+ D M T +AT Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEM--TGYVATRWYRAP 191
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSF-DVECEIMKSIRHRNLI 473
F++ + IG+G FG VYK EV A+K+ +L+ E ++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 474 KVISSCSNEEFKGLVLEYMPQGS---------LEKHLYSTNCILDIFQRLNIMIDVASAL 524
+ S +++EY+ GS LE+ +T I+ ++ L
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT-----------ILREILKGL 129
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 584
+YLH S IH D+K +NVLL + L+DFG+A L D + + + T +MA
Sbjct: 130 DYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMA 184
Query: 585 P 585
P
Sbjct: 185 P 185
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 413 TDGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR 468
+DG+ IG G + V+KA ME AVKV + R + ++ +++ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIEI---LLRYGQ 79
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N+I + + + LV E M G L + + ++ + +EYLH
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH 138
Query: 529 FGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAKLLIGED 568
S V+H DLKPSN+L D + DFG AK L E+
Sbjct: 139 ---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 39/199 (19%)
Query: 420 NLIGRGGFGSVYKA------RLGDGMEVAVKVFNLQC----RRAFKSFDVECEIMKSI-R 468
++G G FG V A + G ++VAVK+ + R A S E ++M +
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS---ELKMMTQLGS 107
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-------------YSTNCILDIFQRLN 515
H N++ ++ +C+ L+ EY G L +L Y L+ + LN
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 516 IM---------IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566
++ VA +E+L F +H DL NVL+ + + DFG+A+ ++
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 567 EDQSMTQTQTLATIGYMAP 585
+ + + + +MAP
Sbjct: 225 DSNYVVRGNARLPVKWMAP 243
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 409 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV----ECEI 463
C + + IG+G FG V+KAR G +VA+K ++ + + F + E +I
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 464 MKSIRHRNLIKVISSCSNEEFKG--------LVLEYMPQGSLEKHLYSTNCILDIFQRLN 515
++ ++H N++ +I C + LV ++ + L L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR 129
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL--LIGEDQSMTQ 573
+M + + L Y+H ++H D+K +NVL+ + + L+DFG+A+ L Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 574 TQTLATIGYMAP 585
+ T+ Y P
Sbjct: 187 XNRVVTLWYRPP 198
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 469 ------HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI---------LDIFQR 513
H N++ ++ +C++ ++ EY G L L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
L+ VA + +L S IH D+ NVLL + +A + DFG+A+ ++ + + +
Sbjct: 163 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 574 TQTLATIGYMAP 585
+ +MAP
Sbjct: 220 GNARLPVKWMAP 231
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFN---LQCRRAFKSFDVECEIMKSI 467
+D + ++G+G FG V K ++ G E AVKV + ++ + +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYL 527
H N+ K+ ++ + LV E G L + S ++ I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 528 HFGCSTPVIHCDLKPSNVLLD----DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
H ++H DLKP N+LL+ D I + DFG++ + S + T Y+
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRII-DFGLSTHF---EASKKXKDKIGTAYYI 195
Query: 584 AP 585
AP
Sbjct: 196 AP 197
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 128 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 185 GLLPVRWMSP 194
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAP 181
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 534 WPVKWYAP 541
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCRRAFKSFDV-ECEIMKSIRHRNLIKVISS 478
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 479 CSNEEFKGL--VLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCS- 532
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 533 -TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V+H DLKP+NV LD L DFG+A++L D S +T + T YM+P
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-FVGTPYYMSP 185
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 460 ECEIMKSIRHRNLIKVISSCSNEEFKGL--VLEYMPQGSLEKHLYSTNCILDIFQRLNIM 517
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+ LEYLH S ++H D+KP N+LL +S G+A+ L
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 535 WPVKWYAP 542
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 194 GLLPVRWMSP 203
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 419 NNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVI 476
+ L+G G + V A L +G E AVK+ Q + E E + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
++ LV E + GS+ H+ + + ++ DVA+AL++LH + +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 537 HCDLKPSNVLLD 548
H DLKP N+L +
Sbjct: 134 HRDLKPENILCE 145
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 45/205 (21%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 469 ------HRNLIKVISSCSN----------------------EEFKGLVLEYMPQGSLEKH 500
H N++ ++ +C++ + GL Y P + E+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 501 LYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560
L S + L+ VA + +L S IH D+ NVLL + +A + DFG+
Sbjct: 163 LSSRDL-------LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 212
Query: 561 AKLLIGEDQSMTQTQTLATIGYMAP 585
A+ ++ + + + + +MAP
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAP 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 176 WPVKWYAP 183
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V AR G +VAVK+ +L+ ++ + E IM+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
E +++E++ G+L + + L+ Q + V AL YLH + VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 541 KPSNVLLDDNMIAYLSDFG 559
K ++LL + LSDFG
Sbjct: 168 KSDSILLTLDGRVKLSDFG 186
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 187 GLLPVRWMSP 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 170 WPVKWYAP 177
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVK-----VFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
IGRG +GSV K G +AVK V + ++ DV +M+S +++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD--IFQRLNIMIDVASALEYLHFGCST 533
+ E + +E M S +K +LD I + + I +A+ H +
Sbjct: 87 YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+IH D+KPSN+LLD + L DFGI+ L+ S+ +T+ YMAP
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAP 194
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFK----SFDVECEIMKSIRH 469
F +G G F V A + K+F ++C ++A K S + E +++ I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASAL 524
N++ + + LV++ + G L EK Y+ + ++ V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAV 133
Query: 525 EYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIG 581
YLH ++H DLKP N+L D+ +SDFG++K+ E + + T G
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPG 187
Query: 582 YMAP 585
Y+AP
Sbjct: 188 YVAP 191
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVK-----VFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+GRG +G V K R + G +AVK V + + +R D+ M+++ +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 115
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL------NIMIDVASALEYLHF 529
+ E + +E M SL+K ++D Q + I + + ALE+LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S VIH D+KPSNVL++ + DFGI+ L+ S+ +T YMAP
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAP 222
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 176 WPVKWYAP 183
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 412 ATDGFS---------ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVEC 461
+TD FS + +++G G V L E AVK+ Q E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 462 EIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
E++ + HRN++++I E+ LV E M GS+ H++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDD-NMIA--YLSDFGIAK--LLIGEDQSMTQTQ 575
ASAL++LH + + H DLKP N+L + N ++ + DFG+ L G+ ++ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 576 TLATIG---YMAP 585
L G YMAP
Sbjct: 178 LLTPCGSAEYMAP 190
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 420 NLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKV 475
L+G+G FG V + G A+K+ + + E ++++ RH L +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
S + V+EY G L HL + R ++ SAL+YLH V
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 270
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++ DLK N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGTPEYLAP 318
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 561
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 182 WPVKWYAP 189
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 134 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 191 GLLPVRWMSP 200
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 420 NLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKV 475
L+G+G FG V + G A+K+ + + E ++++ RH L +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
S + V+EY G L HL + R ++ SAL+YLH V
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 273
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++ DLK N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGTPEYLAP 321
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 193 GLLPVRWMSP 202
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V + G A+K+ + + E ++++ RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + S + V+EY G L HL + R ++ SAL+YLH
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--S 126
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V++ DLK N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGTPEYLAP 178
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 172 WPVKWYAP 179
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 132
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 133 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 190 WPVKWYAP 197
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 200 GLLPVRWMSP 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 422 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
+GRG FG V+ R+ D G + AVK L+ RA + + C + S R ++ + +
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGA 134
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +E + GSL + + C+ + + L + LEYLH S ++H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHG 190
Query: 539 DLKPSNVLL-DDNMIAYLSDFGIAKLL----IGEDQSMTQTQTLATIGYMAP 585
D+K NVLL D A L DFG A L +G+D +T T +MAP
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL-LTGDYIPGTETHMAP 241
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 165 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 222 GLLPVRWMSP 231
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKS----FDVECEIMKSIRHRNLIKVIS 477
IGRG F +VYK L V V LQ R+ KS F E E +K ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 478 SCSNEEFKG-----LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
S + KG LV E G+L+ +L + I + + L++LH +
Sbjct: 93 SWES-TVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLHTR-T 149
Query: 533 TPVIHCDLKPSNVLLD---------DNMIAYLSDFGIAKLLIG 566
P+IH DLK N+ + D +A L AK +IG
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG 192
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 410 CRATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI 467
R T F E IG G FGSV+K RL DG A+K + + E+
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHA 61
Query: 468 ---RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL---NIMIDVA 521
+H ++++ S+ + ++ + EY GSL + I+ F+ ++++ V
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 522 SALEYLHFGCSTPVIHCDLKPSNVLLDDNMI 552
L Y+H S ++H D+KPSN+ + I
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNIFISRTSI 149
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 411 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI- 467
R T F E IG G FGSV+K RL DG A+K + + E+
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 468 --RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL---NIMIDVAS 522
+H ++++ S+ + ++ + EY GSL + I+ F+ ++++ V
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMI 552
L Y+H S ++H D+KPSN+ + I
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNIFISRTSI 153
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 133 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 190 GLLPVRWMSP 199
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 10/182 (5%)
Query: 409 LCRAT-DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEI 463
+ R T + F L+G+G FG V + G A+K+ + + E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
+++ RH L + S + V+EY G L HL + R ++ SA
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 121
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
L+YLH V++ DLK N++LD + ++DFG+ K I + +M T Y+
Sbjct: 122 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGTPEYL 177
Query: 584 AP 585
AP
Sbjct: 178 AP 179
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+LE + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 194 GLLPVRWMSP 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 193 GLLPVRWMSP 202
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 200 GLLPVRWMSP 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 416 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRN 471
F L+G+G FG V + G A+K+ + + E ++++ RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC 531
L + S + V+EY G L HL + R ++ SAL+YLH
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--S 128
Query: 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V++ DLK N++LD + ++DFG+ K I + +M T Y+AP
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGTPEYLAP 180
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 411 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI- 467
R T F E IG G FGSV+K RL DG A+K + + E+
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 468 --RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL---NIMIDVAS 522
+H ++++ S+ + ++ + EY GSL + I+ F+ ++++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLLDDNMI 552
L Y+H S ++H D+KPSN+ + I
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFN------LQCRRAFKSFDVECEI 463
+ D + +LIGRG +G VY A + + VA+K N + C+R + E I
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR----EITI 80
Query: 464 MKSIRHRNLIKVISSCSNEE---FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
+ ++ +I++ E+ F L + S K L+ T L I+ ++
Sbjct: 81 LNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564
+++H + +IH DLKP+N LL+ + + DFG+A+ +
Sbjct: 141 LLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 192 WPVKWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 459 VECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMI 518
E +M+ + + ++++I C E + LV+E G L K+L + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG-EDQSMTQTQTL 577
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 578 ATIGYMAP 585
+ + AP
Sbjct: 192 WPVKWYAP 199
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 20/154 (12%)
Query: 411 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI- 467
R T F E IG G FGSV+K RL DG A+K + ++ E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 468 ------RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL---NIMI 518
+H ++++ S+ + ++ + EY GSL + I+ F+ ++++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI 552
V L Y+H S ++H D+KPSN+ + I
Sbjct: 121 QVGRGLRYIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK-SFDVECEIMKSIRHRN 471
D + +++G G F V A + VA+K + + S + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASALEY 526
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 527 LHFGCSTPVIHCDLKPSNVL---LDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 584 AP 585
AP
Sbjct: 186 AP 187
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 80 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 133
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 134 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 181
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 125
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI E + + T YM+P
Sbjct: 126 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSP 175
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 13 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 127
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK----SFDVECEIMKSIR 468
D + +++G G F V A + VA+K ++A + S + E ++ I+
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI---AKKALEGKEGSMENEIAVLHKIK 74
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASA 523
H N++ + + L+++ + G L EK Y+ ++ V A
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDA 128
Query: 524 LEYLHFGCSTPVIHCDLKPSNVL---LDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATI 580
++YLH ++H DLKP N+L LD++ +SDFG++K+ ED + T
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTP 182
Query: 581 GYMAP 585
GY+AP
Sbjct: 183 GYVAP 187
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 76 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 129
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 130 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 177
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCRRAFKSFDV-ECEIMKSIRHRNLIKVISS 478
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 479 CSNEEFKGL--VLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCS- 532
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 533 -TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V+H DLKP+NV LD L DFG+A++L D+ + + + T YM+P
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAK-EFVGTPYYMSP 185
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 149
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 150 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKS 466
R + +G+GGF Y+ D EV A KV L + E I KS
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ + +++ +++F +VLE + SL + + + R M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH + VIH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAP 195
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK-SFDVECEIMKSIRHRN 471
D + +++G G F V A + VA+K + + S + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASALEY 526
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 527 LHFGCSTPVIHCDLKPSNVL---LDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 584 AP 585
AP
Sbjct: 186 AP 187
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 186
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK-SFDVECEIMKSIRHRN 471
D + +++G G F V A + VA+K + + S + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSL-----EKHLYSTNCILDIFQRLNIMIDVASALEY 526
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 527 LHFGCSTPVIHCDLKPSNVL---LDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 583
LH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 584 AP 585
AP
Sbjct: 186 AP 187
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 419 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR 470
N +G+G F ++K +GD EV +KV + R +SF +M + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+L+ C + LV E++ GSL+ +L ++I +L + +A+A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 531 CSTPVIHCDLKPSNVLL 547
+IH ++ N+LL
Sbjct: 130 EENTLIHGNVCAKNILL 146
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 77 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 130
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 131 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 422 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISS 478
+GRG FG V+ R+ D G + AVK L+ RA + + C + S R ++ + +
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGA 153
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ + +E + GSL + + C+ + + L + LEYLH S ++H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHG 209
Query: 539 DLKPSNVLL-DDNMIAYLSDFGIAKLL 564
D+K NVLL D A L DFG A L
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCL 236
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 19/180 (10%)
Query: 422 IGRGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIK 474
+G+G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD---------IFQRLNIMIDVASALE 525
++ S + +V+E M G L+ +L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 526 YLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
YL+ + +H DL N ++ + + DFG+ + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 184
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 412 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDVECEIM 464
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 465 KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYS------TNCIL---DIFQRLN 515
K ++++++ S + +++E M +G L+ +L S N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
+ ++A + YL+ + +H DL N + ++ + DFG+ + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 576 TLATIGYMAP 585
L + +M+P
Sbjct: 187 GLLPVRWMSP 196
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVKVFNL-QCRRAFKSFDV-ECEIMKSIRHRNLIKVISS 478
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 479 CSNEEFKGL--VLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCS- 532
+ L V+EY G L + LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 533 -TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
V+H DLKP+NV LD L DFG+A++L D S + + T YM+P
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKA-FVGTPYYMSP 185
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 178
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAP
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 183
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+GRG FG V++ + G + AVK L+ R + V C + S R ++ + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 120
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ + +E + GSL + + C+ + + L + LEYLH + ++H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGDV 176
Query: 541 KPSNVLL-DDNMIAYLSDFGIA 561
K NVLL D A L DFG A
Sbjct: 177 KADNVLLSSDGSRAALCDFGHA 198
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKS 466
R + +G+GGF Y+ D EV A KV L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ + +++ +++F +VLE + SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH + VIH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAP 211
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 412 ATDGFS---------ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDVEC 461
+TD FS + +++G G V L E AVK+ Q E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 462 EIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
E++ + HRN++++I E+ LV E M GS+ H++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDD-NMIAYLS----DFGIAKLLIGEDQSMTQTQ 575
ASAL++LH + + H DLKP N+L + N ++ + D G L G+ ++ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 576 TLATIG---YMAP 585
L G YMAP
Sbjct: 178 LLTPCGSAEYMAP 190
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 124 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 177
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 31/158 (19%)
Query: 422 IGRGGFGSVYKARLG-DGMEVAVKVF------NLQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +G+V A G G +VA+K L +RA++ E ++K +RH N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMRHENVIG 88
Query: 475 VISSCSNEE----FKG--LVLEYMPQ--GSLEKH--LYSTNCILDIFQRLNIMIDVASAL 524
++ + +E F LV+ +M G L KH L ++Q L L
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK-------GL 141
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562
Y+H + +IH DLKP N+ ++++ + DFG+A+
Sbjct: 142 RYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 124 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 177
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + T+ YM P
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+GRG FG V++ + G + AVK L+ R + V C + S R ++ + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 136
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ + +E + GSL + + C+ + + L + LEYLH + ++H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGDV 192
Query: 541 KPSNVLL-DDNMIAYLSDFGIA 561
K NVLL D A L DFG A
Sbjct: 193 KADNVLLSSDGSRAALCDFGHA 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKS 466
R + +G+GGF Y+ D EV A KV L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ + +++ +++F +VLE + SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH + VIH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAP 211
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEI 463
+ D + +G G F V K R G+E A K + RA + + E I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ + H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ YLH + + H DLKP N++L D I L DFG+A
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKS 466
R + +G+GGF Y+ D EV A KV L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
+ + +++ +++F +VLE + SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH + VIH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAP 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+GRG FG V++ + G + AVK L+ R + V C + S R ++ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSPR---IVPLYGAVR 134
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ + +E + GSL + + C+ + + L + LEYLH + ++H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGDV 190
Query: 541 KPSNVLL-DDNMIAYLSDFGIA 561
K NVLL D A L DFG A
Sbjct: 191 KADNVLLSSDGSRAALCDFGHA 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL LH + VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 185
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEI 463
+ D + +G G F V K R G+E A K + RA + + E I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ + H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ YLH + + H DLKP N++L D I L DFG+A
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L T+ ++ Q + + V AL LH + VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTD--IVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 189
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEI 463
+ D + +G G F V K R G+E A K + RA + + E I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ + H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ YLH + + H DLKP N++L D I L DFG+A
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 419 NNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVI 476
++ GGF VY+A+ +G G E A+K ++ E MK + H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 477 SSCS---------NEEF-------KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDV 520
S+ S EF KG ++E++ + L S + +L IF
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL-SCDTVLKIF------YQT 145
Query: 521 ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA 561
A++++H P+IH DLK N+LL + L DFG A
Sbjct: 146 CRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL LH + VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 196
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 18/157 (11%)
Query: 422 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVI---- 476
+G GG G V+ A D VA+K L ++ K E +I++ + H N++KV
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 477 -SSCSNEEFKGLVLE----YMPQGSLEKHLYST---NCILDIFQRLNIMIDVASALEYLH 528
S + G + E Y+ Q +E L + +L+ RL M + L+Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH 137
Query: 529 FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLL 564
S V+H DLKP+N+ ++ ++++ + DFG+A+++
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD-IFQRLNIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 184
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 185 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEI 463
+ D + +G G F V K R G+E A K + RA + + E I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ + H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ YLH + + H DLKP N++L D I L DFG+A
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTNC-----------ILDIFQRLNIMIDVA 521
++ +C+ +V+ E+ G+L +L S L + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 522 SALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIG 581
+E+L S IH DL N+LL + + + DFG+A+ + + + + +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 582 YMAP 585
+MAP
Sbjct: 212 WMAP 215
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEI 463
+ D + +G G F V K R G+E A K + RA + + E I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASA 523
++ + H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ YLH + + H DLKP N++L D I L DFG+A
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL LH + VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 239
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 422 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G G FG V++ G K N + E IM + H LI + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
++ L+LE++ G L + + + + + +N M L+++H ++H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDI 175
Query: 541 KPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
KP N++ + + + DFG+A L ++ T AT + AP
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTATAEFAAP 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 421 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDV--ECEIMKSIRHRNLIKVIS 477
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V E G L + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 538 CDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLKP N+LL + + + DFG++ Q+ + T Y+AP
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAP 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHL---------YSTNCILDIFQRLNIMI----D 519
++ +C+ +V+ E+ G+L +L Y + F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 580 IGYMAP 585
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 34/170 (20%)
Query: 135 NLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG--SIPDDICRLVELYKLELGGN 192
NLIT+DL N L+ + L T +L+ LQ L+L +NK++ S DI L KLEL N
Sbjct: 127 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 186
Query: 193 KLSRSIPACFNNL-----IALRILSLGSN--DPLPLEIGNLKV----------------- 228
++ P CF+ + + L + LG + + L LE+ N +
Sbjct: 187 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 246
Query: 229 --------LVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDS 270
L +D S NN + + L LEY FL YN +Q L S
Sbjct: 247 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 296
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 64/163 (39%), Gaps = 6/163 (3%)
Query: 161 QGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPA-CFNNLIALRILSLGSNDPL 219
+ L L NKL RL +L L L NKL +++PA F L L L + N
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQ 98
Query: 220 PLEIGNLKVLVG---IDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGXXXX 276
L IG LV + N + P+ L L YL LGYN LQ L F
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158
Query: 277 XXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGG 319
+ +KL+ L+ L L N+L+ +P G
Sbjct: 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGA 200
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 13 EELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGXXXX 72
++LDL+ NKL A ++ L+LL L DN L +L + L NLE LW
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLE--TLW----- 91
Query: 73 XXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSH--SLEDFQMHNCNVTGDIPEEI 130
+++N L + IG +L + ++ + P
Sbjct: 92 ------------------VTDNKLQAL----PIGVFDQLVNLAELRLDRNQLKSLPPRVF 129
Query: 131 GNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELG 190
+LT L + LG N+L KL L+ L L +N+L+ +L EL L+L
Sbjct: 130 DSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLD 189
Query: 191 GNKLSRSIPACFNNLIALRILSLGSN 216
N+L R F++L L++L L N
Sbjct: 190 NNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGN 192
LT L + L NKL +L+ L+ L + DNKL+ +LV L +L L N
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 193 KLSRSIPACFNNLIALRILSLGSNDPLPLEIG---NLKVLVGIDFSMNNFSGIIPKEIGG 249
+L P F++L L LSLG N+ L G L L + N +
Sbjct: 120 QLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDK 179
Query: 250 LKNLEYLFLGYNRLQGLIPDSF 271
L L+ L L N+L+ + +F
Sbjct: 180 LTELKTLKLDNNQLKRVPEGAF 201
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 122
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 126 IPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELY 185
+P+E+ N +L IDL N+++ + S + +L L+L N+L P L L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 186 KLELGGNKLSRSIPACFNNLIALRILSLGSN 216
L L GN +S FN+L AL L++G+N
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 219 LPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
+P E+ N K L ID S N S + + + L L L YNRL+ + P +F
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 98
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL LH + VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 194
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ L DFG+++ + ED + + ++ I +MAP
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 122
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 34/170 (20%)
Query: 135 NLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG--SIPDDICRLVELYKLELGGN 192
NLIT+DL N L+ + L T +L+ LQ L+L +NK++ S DI L KLEL N
Sbjct: 132 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 191
Query: 193 KLSRSIPACFNNL-----IALRILSLGSN--DPLPLEIGNLKV----------------- 228
++ P CF+ + + L + LG + + L LE+ N +
Sbjct: 192 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 251
Query: 229 --------LVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDS 270
L +D S NN + + L LEY FL YN +Q L S
Sbjct: 252 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 301
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 122
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 122
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 122
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLRE- 149
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 199
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 419 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR 470
N +G+G F ++K +GD EV +KV + R +SF +M + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG 530
+L+ C + LV E++ GSL+ +L ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 531 CSTPVIHCDLKPSNVLL 547
+IH ++ N+LL
Sbjct: 130 EENTLIHGNVCAKNILL 146
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 34/170 (20%)
Query: 135 NLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG--SIPDDICRLVELYKLELGGN 192
NLIT+DL N L+ + L T +L+ LQ L+L +NK++ S DI L KLEL N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 193 KLSRSIPACFNNL-----IALRILSLGSN--DPLPLEIGNLKV----------------- 228
++ P CF+ + + L + LG + + L LE+ N +
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241
Query: 229 --------LVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDS 270
L +D S NN + + L LEY FL YN +Q L S
Sbjct: 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 291
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G +G V A + E AV V + +RA ++ E I + H N++K
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 421 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDV--ECEIMKSIRHRNLIKVIS 477
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V E G L + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 538 CDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLKP N+LL + + + DFG++ Q+ + T Y+AP
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAP 192
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 149
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + + + + T+ YM P
Sbjct: 150 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPP 197
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 421 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDV--ECEIMKSIRHRNLIKVIS 477
++G+G FG V K + E AVKV N + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIH 537
+ +V E G L + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 538 CDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
DLKP N+LL + + + DFG++ Q+ + T Y+AP
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAP 192
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAF---KSFDVECEIMKSIRHRNLIKVISS 478
+G G G V A + E AV V + +RA ++ E I K + H N++K
Sbjct: 14 LGEGAAGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538
+ L LEY G L + + + + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
D+KP N+LLD+ +SDFG+A + ++ + T+ Y+AP
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 38/205 (18%)
Query: 416 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR- 468
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 469 ------HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI--------------- 507
H N++ ++ +C++ ++ EY G L L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 508 -------LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560
L++ L+ VA + +L S IH D+ NVLL + +A + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 561 AKLLIGEDQSMTQTQTLATIGYMAP 585
A+ ++ + + + + +MAP
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAP 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + + +G G G V+K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL-NIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + Q L + I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLR-- 140
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YM+P
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 191
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDVECE--IMKS 466
D + +G G F V K R G++ A K + RR D+E E I+K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I+H N+I + N+ L+ E + G L L + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
LH S + H DLKP N++L D + + DFG+A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 422 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
IG G G V A + G VAVK +L+ ++ + E IM+ +H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540
+ +V+E++ G+L + T+ ++ Q + + V AL LH + VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
K ++LL + LSDFG + E + + T +MAP
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 316
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 422 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ E +++E G L L LD+ + +++AL YL S +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+ NVL+ L DFG+++ + ED + + ++ I +MAP
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 561
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFN------LQCRRAFKS 456
F ++ D + +LIGRG +G VY A + + VA+K N + C+R +
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR- 74
Query: 457 FDVECEIMKSIRHRNLIKVISSCSNEE---FKGLVLEYMPQGSLEKHLYSTNCILDIFQR 513
E I+ ++ +I++ ++ F L + S K L+ T L
Sbjct: 75 ---EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI 131
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570
I+ ++ ++H + +IH DLKP+N LL+ + + DFG+A+ + E +
Sbjct: 132 KTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS 480
+G GGF V L DG A+K ++ + E ++ + H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 481 NE----EFKGLVLEYMPQGSLE---KHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
E L+L + +G+L + L L Q L +++ + LE +H +
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AK 153
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKL----LIGEDQSMTQTQTLA---TIGYMAP 585
H DLKP+N+LL D L D G + G Q++T A TI Y AP
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 414 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFN---LQCRRAFKSFDVECEIMKSIRH 469
D F +IGRG F V ++ G A+K+ N + R F E +++ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 470 RNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
R + ++ + +E + LV+EY G L L + + ++ A++ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH- 179
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+KP N+LLD L+DFG + L + D ++ + T Y++P
Sbjct: 180 --RLGYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSP 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 11/171 (6%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFD---VECEIMKSIRHRNLIKV 475
+IGRG + V RL + A+KV + + D E + + + +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 476 ISSCSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ SC E + V+EY+ G L H+ + + R +++ AL YLH
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 130
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NVLLD L+D+G+ K G T + T Y+AP
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAP 179
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 9/175 (5%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNL 472
D + + +G G FG V++ G A K ++ E + M +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ + + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 273
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DLKP N++ L DFG+ L D + T T + AP
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 325
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN----CILDIFQRLNIM-------IDVA 521
++ +C+ +V+ E+ G+L +L S D+++ + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 522 SALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIG 581
+E+L S IH DL N+LL + + + DFG+A+ + + + + +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 582 YMAP 585
+MAP
Sbjct: 212 WMAP 215
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 422 IGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRN--LIKVIS 477
IG GG V++ A+K NL+ + S+ E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 478 SCSNEEFKGLVLEYMPQGSLEKHLY-STNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+++ +V+E G+++ + + +D ++R + ++ A+ +H ++
Sbjct: 124 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIV 177
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLKP+N L+ D M+ L DFGIA + + S+ + + + YM P
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 414 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDV-ECEIMKSIRHRN 471
D F + +G G G V K + G+ +A K+ +L+ + A ++ + E +++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 472 LIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILD-IFQRLNIMIDVASALEYLHFG 530
++ + ++ + +E+M GSL++ L I + I +++I V L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLRE- 132
Query: 531 CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++H D+KPSN+L++ L DFG++ LI SM + + T YMAP
Sbjct: 133 -KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAP 182
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 413 TDGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR 468
TDG+ IG G + ++KA E AVK+ + R + ++ +++ +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKA---TNXEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
H N+I + + ++ +V E G L + + + ++ + +EYLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH 133
Query: 529 FGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAKLLIGED 568
+ V+H DLKPSN+L D + DFG AK L E+
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+IGRG FG V ++ + + A+K+ N + R F E +++ + + + +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNI--MIDVASALEYLHFGCS 532
+ +E LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 212
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+KP NVLLD N L+DFG + L + +D ++ + + T Y++P
Sbjct: 213 ---VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISP 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 11/171 (6%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFD---VECEIMKSIRHRNLIKV 475
+IGRG + V RL + A+KV + + D E + + + +
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 476 ISSCSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ SC E + V+EY+ G L H+ + + R +++ AL YLH
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 126
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NVLLD L+D+G+ K G T + T Y+AP
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAP 175
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFK------SFDVECEIMKSIRHRNLIK 474
+G G F V K R G+E A K + RA + + E I++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ N L+LE + G L L + + + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 535 VIHCDLKPSNVLLDDNMIA----YLSDFGIA 561
+ H DLKP N++L D I L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 421 LIGRGGFGSVYKA-RLGDGMEVAVKVF--NLQCRRAFKSFDVECEIMKSI--------RH 469
L+G+GGFG+V+ RL D ++VA+KV N + S V C + ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 470 RNLIKVISSCSNEEFKGLVLEY-MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
+I+++ +E LVLE +P L ++ + + R V +A+++ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH 156
Query: 529 FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLIGE 567
S V+H D+K N+L+D A L DFG LL E
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE 193
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 414 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRR------AFKSFDVECEIMKS 466
D + +G G +G VYKA VA+K L+ A + E ++K
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKE 89
Query: 467 IRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL--NIMIDVASAL 524
++HRN+I++ S + L+ EY + L+K++ D+ R+ + + + + +
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRVIKSFLYQLINGV 145
Query: 525 EYLHFGCSTPVIHCDLKPSNVLL-----DDNMIAYLSDFGIAK 562
+ H S +H DLKP N+LL + + + DFG+A+
Sbjct: 146 NFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 422 IGRGGFGSVYKAR-LGDGMEVAVK-----VFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+GRG +G V K R + G +AVK V + + +R D+ M+++ +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 71
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL------NIMIDVASALEYLHF 529
+ E + +E M SL+K Y ++D Q + I + + ALE+LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDK-FYKQ--VIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S VIH D+KPSNVL++ + DFGI+ L+ + + + YMAP
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAP 178
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+IGRG FG V ++ + + A+K+ N + R F E +++ + + + +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNI--MIDVASALEYLHFGCS 532
+ +E LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 196
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+KP NVLLD N L+DFG + L + +D ++ + + T Y++P
Sbjct: 197 ---VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISP 245
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 27/188 (14%)
Query: 413 TDGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQ-----C---RRAFKSFDVECEI 463
+ +S + +G G FG V+ A + EV VK + C +E I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 464 MKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN------IM 517
+ + H N+IKV+ N+ F LV+E G +D RL+ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSG------LDLFAFIDRHPRLDEPLASYIF 136
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
+ SA+ YL +IH D+K N+++ ++ L DFG A L ++
Sbjct: 137 RQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFC 190
Query: 578 ATIGYMAP 585
TI Y AP
Sbjct: 191 GTIEYCAP 198
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQT 574
+ + + AL YL VIH D+KPSN+LLD+ L DFGI+ L+ +D++ ++
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRS 184
Query: 575 QTLATIGYMAP 585
A YMAP
Sbjct: 185 AGCA--AYMAP 193
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFD---VECEIMKSIRHRNLIKV 475
+IGRG + V RL + A+KV + + D E + + + +
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 476 ISSCSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ SC E + V+EY+ G L H+ + + R +++ AL YLH
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 141
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAK--LLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NVLLD L+D+G+ K L G+ T + T Y+AP
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAP 190
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 9/175 (5%)
Query: 414 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNL 472
D + + +G G FG V++ G A K ++ E + M +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 473 IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS 532
+ + + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 167
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H DLKP N++ L DFG+ L D + T T + AP
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKXVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ----VIQMELDHERMSYLLYQMLXGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 80/215 (37%), Gaps = 56/215 (26%)
Query: 422 IGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFDVE-----CEIMKSIRHRNLIKV 475
IG+G +G V A + A+K+ N R DVE +MK + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHL------YSTNCILDIFQRL--------------- 514
+E++ LV+E G L L + C +D+ +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 515 ------------------NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN--MIAY 554
NIM + SAL YLH + + H D+KP N L N
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK 210
Query: 555 LSDFGIAKLLI----GEDQSMTQTQTLATIGYMAP 585
L DFG++K GE MT T ++AP
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAP 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572
L+I I +A A+E+LH S ++H DLKPSN+ + + + DFG+ + +++ T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 420 NLIGRGGFGSVYKA-RLGDGMEVAVKV-----FNLQCRRAFKSFDVECEIMKSIRHRNLI 473
+IG+G F V + G + AVK+ F + + E I ++H +++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL---NIMIDVASALEYLHFG 530
+++ + S++ +V E+M L + ++ + M + AL Y H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-- 147
Query: 531 CSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+IH D+KP NVLL +++ L DFG+A + +GE + + T +MAP
Sbjct: 148 -DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGE-SGLVAGGRVGTPHFMAP 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFD---VECEIMKSIRHRNLIKV 475
+IGRG + V RL + A++V + + D E + + + +
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 476 ISSCSNEEFK-GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP 534
+ SC E + V+EY+ G L H+ + + R +++ AL YLH
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERG 173
Query: 535 VIHCDLKPSNVLLDDNMIAYLSDFGIAK--LLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NVLLD L+D+G+ K L G+ T + T Y+AP
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPNYIAP 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 78
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ----VIQMELDHERMSYLLYQMLXGIKH 134
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKXVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ----VIQMELDHERMSYLLYQMLCGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ----VIQMELDHERMSYLLYQMLXGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPD-DICRLVELYKLELGG 191
L +L T++L N+L L KL+ L L +N +E SIP R+ L +L+LG
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGE 140
Query: 192 -NKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGID---FSMNNFSGIIPKEI 247
+L A F L+ LR L+LG + +I NL LV ++ S N I P
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLK--DIPNLTALVRLEELELSGNRLDLIRPGSF 198
Query: 248 GGLKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLS 307
GL +L L+L + ++ + ++F + L LE+LNLS
Sbjct: 199 QGLTSLRKLWLMHAQVATIERNAF------------------------DDLKSLEELNLS 234
Query: 308 FNKL 311
N L
Sbjct: 235 HNNL 238
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 177 DICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE---IGNLKVLVGID 233
++ LV L +LEL GN+L P F L +LR L L +E +LK L ++
Sbjct: 173 NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELN 232
Query: 234 FSMNNFSGIIPKEIGGLKNLEYLFLGYN 261
S NN + L LE + L +N
Sbjct: 233 LSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 420 NLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+IGRG FG V +L + +V A+K+ N + R F E +++ + + + +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYS-TNCILDIFQRLNI--MIDVASALEYLHFGCS 532
+ ++ LV++Y G L L + + + R + M+ ++ LH+
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY--- 196
Query: 533 TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+H D+KP N+L+D N L+DFG + L + ED ++ + + T Y++P
Sbjct: 197 ---VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISP 245
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM- 464
L + +D + IG G FG R E VAVK R + +V+ EI+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIIN 68
Query: 465 -KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMI 518
+S+RH N+++ +V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQT 576
S + Y H + V H DLK N LLD + L DFG +K + Q + T
Sbjct: 125 --ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---T 176
Query: 577 LATIGYMAP 585
+ T Y+AP
Sbjct: 177 VGTPAYIAP 185
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPEVVTRYYRAP 194
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G +VA+K + + +RA++ E ++K ++H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 105
Query: 475 VI------SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDI-FQRLNIMIDVASALEYL 527
++ SS N LV+ +M Q L+K I+ + F I V L+ L
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQK-------IMGMEFSEEKIQYLVYQMLKGL 157
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ S V+H DLKP N+ ++++ + DFG+A+ E T + T Y AP
Sbjct: 158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP 210
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKXVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 422 IGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM--KSIRHRNLIKVISS 478
IG G FG R E VAVK R A +V+ EI+ +S+RH N+++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIE---RGAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 479 CSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
+++EY G L + + +S + FQ+L S + Y H S
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---SM 135
Query: 534 PVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ H DLK N LLD + L DFG +K + Q + T+ T Y+AP
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAP 186
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTNCIL-------DIFQRLNIM-------I 518
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLA 578
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 579 TIGYMAP 585
+ +MAP
Sbjct: 213 PLKWMAP 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
+G G +GSV A G +VA+K + + +RA++ E ++K ++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 87
Query: 475 VI------SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDI-FQRLNIMIDVASALEYL 527
++ SS N LV+ +M Q L+K I+ + F I V L+ L
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQK-------IMGLKFSEEKIQYLVYQMLKGL 139
Query: 528 HFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ S V+H DLKP N+ ++++ + DFG+A+ E T + T Y AP
Sbjct: 140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 474 KVISSCSNEEFKGLVL------------------EYMPQGSLEKHLYSTNCILDIFQRLN 515
++ +C+ +V+ E++P + LY L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD--FLTLEHLIC 154
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 576 TLATIGYMAP 585
+ +MAP
Sbjct: 212 ARLPLKWMAP 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPD-DICRLVELYKLELGG 191
L +L T++L N+L L KL+ L L +N +E SIP R+ L +L+LG
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGE 140
Query: 192 -NKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGID---FSMNNFSGIIPKEI 247
+L A F L+ LR L+LG + +I NL LV ++ S N I P
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLK--DIPNLTALVRLEELELSGNRLDLIRPGSF 198
Query: 248 GGLKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLS 307
GL +L L+L + ++ + ++F + L LE+LNLS
Sbjct: 199 QGLTSLRKLWLMHAQVATIERNAF------------------------DDLKSLEELNLS 234
Query: 308 FNKL 311
N L
Sbjct: 235 HNNL 238
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 181 LVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE---IGNLKVLVGIDFSMN 237
LV L +LEL GN+L P F L +LR L L +E +LK L ++ S N
Sbjct: 177 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHN 236
Query: 238 NFSGIIPKEIGGLKNLEYLFLGYN 261
N + L LE + L +N
Sbjct: 237 NLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 67 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 110
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 111 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 167
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 168 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAV-----KVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G+GGF ++ D EV K L+ + K +E I +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ +F +VLE + SL + L+ L + + + +YLH V
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAP 186
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 71 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 114
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 115 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 171
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 172 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 199
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 474 KVISSCSNEEFKGLVL------------------EYMPQGSLEKHLYSTNCILDIFQRLN 515
++ +C+ +V+ E++P + LY L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 152
Query: 516 IMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQ 575
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 576 TLATIGYMAP 585
+ +MAP
Sbjct: 210 ARLPLKWMAP 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAV-----KVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G+GGF ++ D EV K L+ + K +E I +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ +F +VLE + SL + L+ L + + + +YLH V
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAP 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 212 LPLKWMAP 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 249 LPLKWMAP 256
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 31/184 (16%)
Query: 84 KSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEI-GNLTNLITIDLG 142
+ L + +S N L I P NL SL + ++H+ N +P+ + L N+ I++G
Sbjct: 102 RKLQKLYISKNHLVEIPP-----NLPSSLVELRIHD-NRIRKVPKGVFSGLRNMNCIEMG 155
Query: 143 GNKLNGS--------------ILITLSKL--------QKLQGLVLDDNKLEGSIPDDICR 180
GN L S + I+ +KL + L L LD NK++ +D+ R
Sbjct: 156 GNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLR 215
Query: 181 LVELYKLELGGNKLSRSIPACFNNLIALRILSLGSN--DPLPLEIGNLKVLVGIDFSMNN 238
+LY+L LG N++ + L LR L L +N +P + +LK+L + NN
Sbjct: 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNN 275
Query: 239 FSGI 242
+ +
Sbjct: 276 ITKV 279
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 126 IPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELY 185
+P+EI T L+ DL N ++ LQ L LVL +NK+ L +L
Sbjct: 48 VPKEISPDTTLL--DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 186 KLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNF--SGII 243
KL + N L P ++L+ LRI L+ + I+ N SG
Sbjct: 106 KLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFE 165
Query: 244 PKEIGGLKNLEYLFLGYNRLQGLIPD 269
P GLK L YL + +L G+ D
Sbjct: 166 PGAFDGLK-LNYLRISEAKLTGIPKD 190
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 163 LVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE 222
L L +N + DD L LY L L NK+S+ F+ L L+ L + N + +
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP 118
Query: 223 IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQ--GLIPDSF 271
LV + N + GL+N+ + +G N L+ G P +F
Sbjct: 119 PNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF 169
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAP 585
H D+KP N+L+ + AYL DFGIA D+ +TQ T+ T+ Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAP 204
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 60 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 103
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 104 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 160
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S T + T Y AP
Sbjct: 161 ILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 203 LPLKWMAP 210
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMH-NCNVTGDIPEEIGNLTNLITIDL 141
C++LT++ L +N L I G LE + N + P L L T+ L
Sbjct: 54 CRNLTILWLHSNVLARIDAAAFTG--LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 111
Query: 142 GGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICR-LVELYKLELGGNKLSRSIPA 200
L L LQ L L DN L+ ++PDD R L L L L GN++S
Sbjct: 112 DRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPER 170
Query: 201 CFNNLIALRILSLGSNDPL---PLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLF 257
F L +L L L N P +L L+ + NN S + + + L+ L+YL
Sbjct: 171 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 230
Query: 258 LGYN 261
L N
Sbjct: 231 LNDN 234
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 179 CRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPL----PLEIGNLKVLVGIDF 234
CR L L L N L+R A F L L L L N L P L L +
Sbjct: 54 CR--NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 111
Query: 235 SMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
+ P GL L+YL+L N LQ L D+F
Sbjct: 112 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 148
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 82/231 (35%), Gaps = 29/231 (12%)
Query: 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGX 69
+NL L L N L A ++ L+ L L DN+ S+ T L L L L
Sbjct: 55 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL-DR 113
Query: 70 XXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKT--SIGNLS------------------ 109
+L + L +N L + T +GNL+
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 173
Query: 110 --HSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167
HSL+ +H V P +L L+T+ L N L+ L+ L+ LQ L L+D
Sbjct: 174 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 233
Query: 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILS-LGSND 217
N CR L+ S +P +A R L L +ND
Sbjct: 234 NPWVCD-----CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAAND 279
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAV-----KVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G+GGF ++ D EV K L+ + K +E I +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ +F +VLE + SL + L+ L + + + +YLH V
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 142
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAP 190
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSL------EKHLYSTNCILDIFQRLNIMIDVAS 522
H N++K+ ++ LV+E + G L +KH T IM + S
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMRKLVS 117
Query: 523 ALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
A+ ++H V+H DLKP N+L +DN+ + DFG A+L ++Q + T
Sbjct: 118 AVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFT 172
Query: 580 IGYMAP 585
+ Y AP
Sbjct: 173 LHYAAP 178
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 203 LPLKWMAP 210
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMH-NCNVTGDIPEEIGNLTNLITIDL 141
C++LT++ L +N L I G LE + N + P L L T+ L
Sbjct: 55 CRNLTILWLHSNVLARIDAAAFTG--LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112
Query: 142 GGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICR-LVELYKLELGGNKLSRSIPA 200
L L LQ L L DN L+ ++PDD R L L L L GN++S
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 201 CFNNLIALRILSLGSNDPL---PLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLF 257
F L +L L L N P +L L+ + NN S + + + L+ L+YL
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 258 LGYN 261
L N
Sbjct: 232 LNDN 235
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 179 CRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPL----PLEIGNLKVLVGIDF 234
CR L L L N L+R A F L L L L N L P L L +
Sbjct: 55 CR--NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112
Query: 235 SMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
+ P GL L+YL+L N LQ L D+F
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 82/231 (35%), Gaps = 29/231 (12%)
Query: 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGX 69
+NL L L N L A ++ L+ L L DN+ S+ T L L L L
Sbjct: 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL-DR 114
Query: 70 XXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKT--SIGNLS------------------ 109
+L + L +N L + T +GNL+
Sbjct: 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174
Query: 110 --HSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167
HSL+ +H V P +L L+T+ L N L+ L+ L+ LQ L L+D
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILS-LGSND 217
N CR L+ S +P +A R L L +ND
Sbjct: 235 NPWVCD-----CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAAND 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 212 LPLKWMAP 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 79
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 135
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 203 LPLKWMAP 210
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 78
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 134
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM- 464
L + +D + IG G FG R E VAVK R +V+ EI+
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE---RGEKIDENVKREIIN 68
Query: 465 -KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMI 518
+S+RH N+++ +V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYL--SDFGIAKLLIGEDQSMTQTQT 576
S + Y H + V H DLK N LLD + L +DFG +K + Q +
Sbjct: 125 --ISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---A 176
Query: 577 LATIGYMAP 585
+ T Y+AP
Sbjct: 177 VGTPAYIAP 185
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 79
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 135
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 422 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCRRA-FKSFDVECEIMKSIRHR-NLI 473
+GRG FG V +A + VAVK+ + ++ E +I+ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 474 KVISSCSNEEFKGLVL-EYMPQGSLEKHLYSTN--------CILDIFQRLNIM------- 517
++ +C+ +V+ E+ G+L +L S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 203 LPLKWMAP 210
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 86
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 142
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM- 464
L + +D + IG G FG R E VAVK R +V+ EI+
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIIN 67
Query: 465 -KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMI 518
+S+RH N+++ +V+EY G L + + +S + FQ+L
Sbjct: 68 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 123
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQT 576
S + Y H + V H DLK N LLD + L DFG +K + Q + T
Sbjct: 124 --ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---T 175
Query: 577 LATIGYMAP 585
+ T Y+AP
Sbjct: 176 VGTPAYIAP 184
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 416 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV----FNLQCRRAFKSFDVECEIMKSIRHR 470
F + +G G +G V+K R DG AVK F RA K +V K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH-EKVGQHP 117
Query: 471 NLIKVISSCSNEEFKGLVLEYMPQG-SLEKHLYSTNCILDIFQRLNIMIDVASALEYLHF 529
+++ + EE L L+ G SL++H + L Q + D AL +LH
Sbjct: 118 CCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH- 174
Query: 530 GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560
S ++H D+KP+N+ L L DFG+
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 84
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 140
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 141 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 193
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 141
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 421 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCRRAFKSFDVECEIMKSIRHRNLIKVI 476
+G+GGF ++ D EV A K+ L + +E I +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVI 536
+ +F +VLE + SL + L+ L + + + +YLH VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 163
Query: 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
H DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 86
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 142
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAV-----KVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G+GGF ++ D EV K L+ + K +E I +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ +F +VLE + SL + L+ L + + + +YLH V
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 160
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSI 467
+D + +G G +G V K +L G E A+K+ + E ++K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN---IMIDVASAL 524
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGI-AKLLIGEDQSMTQTQTLATI 580
YLH ++H DLKP N+LL+ + + + DFG+ A +G + L T
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKMKERLGTA 187
Query: 581 GYMAP 585
Y+AP
Sbjct: 188 YYIAP 192
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 413 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCRRAFKSFDV---ECEIMKSI 467
+D + +G G +G V K +L G E A+K+ + E ++K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLN---IMIDVASAL 524
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 525 EYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGI-AKLLIGEDQSMTQTQTLATI 580
YLH ++H DLKP N+LL+ + + + DFG+ A +G + L T
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKMKERLGTA 170
Query: 581 GYMAP 585
Y+AP
Sbjct: 171 YYIAP 175
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 123
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 179
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 180 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 422 IGRGGFG---SVYKARLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNL 472
IG G G + Y A L VA+K + +RA++ E +MK + H+N+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 123
Query: 473 IKVISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEY 526
I +++ + EEF+ LV+E M + LD + ++ + +++
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLYQMLCGIKH 179
Query: 527 LHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
LH S +IH DLKPSN+++ + + DFG+A+ S T + T Y AP
Sbjct: 180 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 232
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 421 LIGRGGFGSVYKARLGDGMEVAV-----KVFNLQCRRAFKSFDVECEIMKSIRHRNLIKV 475
+G+GGF ++ D EV K L+ + K +E I +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 476 ISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535
+ +F +VLE + SL + L+ L + + + +YLH V
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 136
Query: 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
IH DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 184
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 451 RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSL---EKHLY----S 503
+ + F E +I+ I++ + +N + ++ EYM S+ +++ + +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 504 TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563
C + I I+ V ++ Y+H + H D+KPSN+L+D N LSDFG ++
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 564 LIGEDQSMTQTQTLATIGYMAP 585
++ D+ + ++ T +M P
Sbjct: 202 MV--DKKIKGSR--GTYEFMPP 219
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAKLLIGE 567
IM + A++YLH S + H D+KP N+L N I L+DFG AK GE
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 30/206 (14%)
Query: 387 KQPSNDANMPLVAMWRTFSYLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKV 445
KQPSN+ L+ + TD F+ ++G+G FG V A R G A+K+
Sbjct: 7 KQPSNN--------------LDRVKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKI 51
Query: 446 FNLQCRRAFKSFDVECEIMKS-----IRHRNLIKVISSCSNEEFK-GLVLEYMPQGSLEK 499
L+ + DVEC +++ + + + SC + V+EY+ G L
Sbjct: 52 --LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 109
Query: 500 HLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559
H+ + Q + +++ L +LH +I+ DLK NV+LD ++DFG
Sbjct: 110 HIQQVGKFKEP-QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFG 165
Query: 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585
+ K + + +T + T Y+AP
Sbjct: 166 MCKEHMMD--GVTTREFCGTPDYIAP 189
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 438 GMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKG- 486
G+ VAVK + +RA++ E ++K + H+N+I +++ + EEF+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDV 102
Query: 487 -LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNV 545
LV+E M + + LD + ++ + +++LH S +IH DLKPSN+
Sbjct: 103 YLVMELMDANLCQ----VIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNI 155
Query: 546 LLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
++ + + DFG+A+ + T + T Y AP
Sbjct: 156 VVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAP 192
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 33/128 (25%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 68 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 111
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 112 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 168
Query: 555 LSDFGIAK 562
+ DFG+A+
Sbjct: 169 ILDFGLAR 176
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 401 WRTFSYLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDV 459
W S++ D + +GRG + V++A + + +V VK+ + K
Sbjct: 24 WDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--- 80
Query: 460 ECEIMKSIRH-RNLIKVISSCSN--EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNI 516
E +I++++R N+I + + LV E++ K LY T DI R
Sbjct: 81 EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-KQLYQTLTDYDI--RF-Y 136
Query: 517 MIDVASALEYLHFGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKL 563
M ++ AL+Y H S ++H D+KP NV++D ++ L D+G+A+
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 422 IGRGGFGSVYKA-RLGDGMEVAVKVFN------LQCRRAFKSFDVECEIMKSIRHRNLIK 474
IG G G V A G+ VAVK + +RA++ E ++K + H+N+I
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIIS 87
Query: 475 VISSCSN----EEFKG--LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
+++ + EEF+ LV+E M + + LD + ++ + +++LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
S +IH DLKPSN+++ + + DFG+A+ + T + T Y AP
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYRAP 194
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIG--- 224
+K S+P I ++ L L N++++ P F++LI L+ L LGSN L +G
Sbjct: 28 SKRHASVPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85
Query: 225 NLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXXXX 284
+L L +D N + + L +L+ LF+ N+L L
Sbjct: 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTEL------------------ 127
Query: 285 XXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGG 319
P +E+L++L L L N+L+ IP G
Sbjct: 128 -------PRGIERLTHLTHLALDQNQLKS-IPHGA 154
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 161 QGLVLDDN---KLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND 217
Q L L DN KLE + D + L ELY LG N+L F++L L +L LG+N
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELY---LGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99
Query: 218 --PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
LP + + V + F N +P+ I L +L +L L N+L+ + +F
Sbjct: 100 LTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAF 155
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 19 QNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGXXXXXXXXXX 78
++K +VP I + ++L L DN ++ + D L NL+EL L G
Sbjct: 27 RSKRHASVPAGI--PTNAQILYLHDNQITKLEPGVFD-SLINLKELYL-GSNQLGALPVG 82
Query: 79 XXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLIT 138
LTV+ L N L +LP L H E F CN ++P I LT+L
Sbjct: 83 VFDSLTQLTVLDLGTNQL-TVLPSAVFDRLVHLKELFMC--CNKLTELPRGIERLTHLTH 139
Query: 139 IDLGGNKLNG 148
+ L N+L
Sbjct: 140 LALDQNQLKS 149
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFN-VSTLKLLGLQDNSLSGSLSSITDVRLPNL 61
P +L NL+EL L N+L G +PV +F+ ++ L +L L N L+ S++ D RL +L
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFD-RLVHL 114
Query: 62 EELVL 66
+EL +
Sbjct: 115 KELFM 119
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMEPEVVTRYYRAP 194
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 515 NIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567
I + + ALE+LH S VIH D+KPSNVL++ DFGI+ L+ +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 449 QCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLE--KHLYSTNC 506
+RA++ E +MK + H+N+I GL+ + PQ SLE + +Y
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVME 109
Query: 507 ILDI-----------FQRLNIMI-DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554
++D +R++ ++ + +++LH S +IH DLKPSN+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+ DFG+A+ S + T Y AP
Sbjct: 167 ILDFGLAR---TAGTSFMMEPEVVTRYYRAP 194
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 514 LNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQ 573
++ VA +E+L S IH DL N+LL +N + + DFG+A+ + + +
Sbjct: 202 ISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 574 TQTLATIGYMAP 585
T + +MAP
Sbjct: 259 GDTRLPLKWMAP 270
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSN--DPLPLEIGNLKVLV 230
+I +I + L +L L GN L+ +PA NL LR+L L N LP E+G+ L
Sbjct: 238 NISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLK 296
Query: 231 GIDFSMNNFSGIIPKEIGGLKNLEYL 256
F +N +P E G L NL++L
Sbjct: 297 YFYF-FDNMVTTLPWEFGNLCNLQFL 321
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 119 NCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDI 178
N N ++P EI NL+NL +DL N+L S+ L +L+ DN + ++P +
Sbjct: 255 NGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN-MVTTLPWEF 312
Query: 179 CRLVELYKLELGGNKLSRSI 198
L L L + GN L +
Sbjct: 313 GNLCNLQFLGVEGNPLEKQF 332
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLS 47
E+P EI NL NL LDL N+L ++P + + LK DN ++
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 121 NVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV--LDDNKLEGSIPDDI 178
N+ +P E GNL NL + + GN L L L++ + + GL+ L DN+ E +P +
Sbjct: 303 NMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE-KSVTGLIFYLRDNRPEIPLPHE- 360
Query: 179 CRLVEL 184
R +E+
Sbjct: 361 RRFIEI 366
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 421 LIGRGGFGSVY-KARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLI 473
++G+G FG V R G AVK+ L+ + DVEC +++ + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ S + V+EY+ G L H+ F+ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NV+LD ++DFG+ K I + +T T Y+AP
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAP 190
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 471 NLIKVISSCSNEEFK--GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
N+IK+I + + K LV EY+ K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIA-YLSDFGIAKL 563
S ++H D+KP NV++D L D+G+A+
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 471 NLIKVISSCSNEEFK--GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLH 528
N+IK+I + + K LV EY+ K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 529 FGCSTPVIHCDLKPSNVLLDDNMIA-YLSDFGIAKL 563
S ++H D+KP NV++D L D+G+A+
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 421 LIGRGGFGSVY-KARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLI 473
++G+G FG V R G AVK+ L+ + DVEC +++ + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 474 KVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST 533
++ S + V+EY+ G L H+ F+ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 534 PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585
+I+ DLK NV+LD ++DFG+ K I + +T T Y+AP
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAP 511
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 109/264 (41%), Gaps = 67/264 (25%)
Query: 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELV 65
+ NL LE LD+ NK VS + +L +L NLE L+
Sbjct: 169 LANLTTLERLDISSNK-----------VSDISVLA----------------KLTNLESLI 201
Query: 66 LWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGD 125
+NN + I P +G L++ L++ + N N D
Sbjct: 202 -------------------------ATNNQISDITP---LGILTN-LDELSL-NGNQLKD 231
Query: 126 IPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELY 185
I + +LTNL +DL N++ S L LS L KL L L N++ P + L L
Sbjct: 232 I-GTLASLTNLTDLDLANNQI--SNLAPLSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 186 KLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE-IGNLKVLVGIDFSMNNFSGIIP 244
LEL N+L P +NL L L+L N+ + + +L L + FS N S +
Sbjct: 287 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDV-- 342
Query: 245 KEIGGLKNLEYLFLGYNRLQGLIP 268
+ L N+ +L G+N++ L P
Sbjct: 343 SSLANLTNINWLSAGHNQISDLTP 366
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM- 464
L + +D + IG G FG R E VAVK R +V+ EI+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIIN 68
Query: 465 -KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMI 518
+S+RH N+++ +V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQT 576
S + Y H + V H DLK N LLD + L FG +K + Q + T
Sbjct: 125 --ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS---T 176
Query: 577 LATIGYMAP 585
+ T Y+AP
Sbjct: 177 VGTPAYIAP 185
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 460 ECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMID 519
E ++K + H N++K+ ++ LV+E G L + ++ + I+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-IIKQ 144
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGEDQSMTQTQT 576
V S + YLH ++H DLKP N+LL + + + + DFG++ + E+Q + +
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMK-ER 198
Query: 577 LATIGYMAP 585
L T Y+AP
Sbjct: 199 LGTAYYIAP 207
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELG 190
+LT L T+ L N+L L L +L L L N+L+ S+P + RL +L +L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 191 GNKLSRSIPA-CFNNLIALRILSLGSN 216
N+L +SIPA F+ L L+ LSL +N
Sbjct: 140 TNQL-QSIPAGAFDKLTNLQTLSLSTN 165
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191
+LT L + LGGN+L +L KL+ L L+ N+L+ +L L L L
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLST 164
Query: 192 NKLSRSIPACFNNLIALRILSLGSN 216
N+L F+ L L+ ++L N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELGG 191
LT L ++L N+L L +L L L +N+L S+P + L +L KL LGG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 192 NKLSRSIPA-CFNNLIALRILSLGSNDPLPLEIGNLKVLVGI 232
N+L +S+P+ F+ L L+ L L +N + G L +
Sbjct: 117 NQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 69/265 (26%)
Query: 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELV 65
+ NL LE LD+ NK VS + +L +L NLE L+
Sbjct: 168 LANLTTLERLDISSNK-----------VSDISVLA----------------KLTNLESLI 200
Query: 66 LWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSH-SLEDFQMHNCNVTG 124
+NN + I P + NL SL Q+ +
Sbjct: 201 -------------------------ATNNQISDITPLGILTNLDELSLNGNQLKDIGT-- 233
Query: 125 DIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVEL 184
+ +LTNL +DL N++ S L LS L KL L L N++ P + L L
Sbjct: 234 -----LASLTNLTDLDLANNQI--SNLAPLSGLTKLTELKLGANQISNISP--LAGLTAL 284
Query: 185 YKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE-IGNLKVLVGIDFSMNNFSGII 243
LEL N+L P +NL L L+L N+ + + +L L + FS N S +
Sbjct: 285 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDV- 341
Query: 244 PKEIGGLKNLEYLFLGYNRLQGLIP 268
+ L N+ +L G+N++ L P
Sbjct: 342 -SSLANLTNINWLSAGHNQISDLTP 365
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELG 190
+LT L T+ L N+L L L +L L L N+L+ S+P + RL +L +L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 191 GNKLSRSIPA-CFNNLIALRILSLGSN 216
N+L +SIPA F+ L L+ LSL +N
Sbjct: 140 TNQL-QSIPAGAFDKLTNLQTLSLSTN 165
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191
+LT L + LGGN+L +L KL+ L L+ N+L+ +L L L L
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLST 164
Query: 192 NKLSRSIPACFNNLIALRILSLGSN 216
N+L F+ L L+ ++L N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELGG 191
LT L ++L N+L L +L L L +N+L S+P + L +L KL LGG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 192 NKLSRSIPA-CFNNLIALRILSLGSNDPLPLEIGNLKVLVGI 232
N+L +S+P+ F+ L L+ L L +N + G L +
Sbjct: 117 NQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 25/189 (13%)
Query: 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDVECEIM- 464
L + +D + IG G FG R E VAVK R +V+ EI+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIIN 68
Query: 465 -KSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHL-----YSTNCILDIFQRLNIMI 518
+S+RH N+++ +V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 519 DVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLS--DFGIAKLLIGEDQSMTQTQT 576
S + Y H + V H DLK N LLD + L FG +K + Q T
Sbjct: 125 --ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP---KDT 176
Query: 577 LATIGYMAP 585
+ T Y+AP
Sbjct: 177 VGTPAYIAP 185
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 8/184 (4%)
Query: 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMH-NCNVTGDIPEEIGNLTNLITIDL 141
C++LT++ L +N L GI G LE + N + P L +L T+ L
Sbjct: 54 CRNLTILWLHSNALAGIDAAAFTGLTL--LEQLDLSDNAQLRVVDPTTFRGLGHLHTLHL 111
Query: 142 GGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICR-LVELYKLELGGNKLSRSIPA 200
L L LQ L L DN L+ ++PD+ R L L L L GN++
Sbjct: 112 DRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHLFLHGNRIPSVPEH 170
Query: 201 CFNNLIALRILSLGSNDPL---PLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLF 257
F L +L L L N P +L L+ + NN S + + + L++L+YL
Sbjct: 171 AFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLR 230
Query: 258 LGYN 261
L N
Sbjct: 231 LNDN 234
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 52/137 (37%), Gaps = 4/137 (2%)
Query: 139 IDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSI 198
I L GN+++ + + L L L N L G L L +L+L N R +
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 199 -PACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDF---SMNNFSGIIPKEIGGLKNLE 254
P F L L L L L G + L + + NN + L NL
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLT 155
Query: 255 YLFLGYNRLQGLIPDSF 271
+LFL NR+ + +F
Sbjct: 156 HLFLHGNRIPSVPEHAF 172
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 44/118 (37%)
Query: 223 IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXX 282
G L LV ++ N +GI P G +++ L LG N+++ + F
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 283 XXXXXXGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 340
+P S E L+ L LNL+ N +S G CG+P+
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 130 IGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLEL 189
G L +L+ ++L N+L G +Q L L +NK++ L +L L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 190 GGNKLSRSIPACFNNLIALRILSLGSN 216
N++S +P F +L +L L+L SN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 163 LVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND----P 218
L L N+++ D+ L +LEL N +S P FNNL LR L L SN P
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 219 LPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRL 263
L + G L L +D S N ++ L NL+ L +G N L
Sbjct: 97 LGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 31/282 (10%)
Query: 5 EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLS-------GSLSSITDVR 57
E + +LEEL+L +N + P A N+ L+ LGL+ N L LS++T +
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110
Query: 58 LPNLEELVLWGXXXXXXXXXXXXXXCKSLTV-----IGLSNNPLDGILPKTSIGNLSHSL 112
+ + ++L KSL V + +S+ G+ +SL
Sbjct: 111 ISENKIVILLDYMFQDLYNL------KSLEVGDNDLVYISHRAFSGL----------NSL 154
Query: 113 EDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG 172
E + CN+T E + +L LI + L +N + +L +L+ L +
Sbjct: 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214
Query: 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE---IGNLKVL 229
++ + + L L + L+ +L+ LR L+L N +E + L L
Sbjct: 215 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRL 274
Query: 230 VGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
I + + P GL L L + N+L L F
Sbjct: 275 QEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 130 IGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLE 188
I L N+ + LGGNKL+ + L +L L L+L N+L+ S+P+ + +L L +L
Sbjct: 59 IQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 189 LGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIG---NLKVLVGIDFSMNNFSGIIPK 245
L N+L F+ L L L+L N L G L L +D S N +
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175
Query: 246 EIGGLKNLEYLFLGYNRLQGLIPD 269
L L+ L L N+L+ +PD
Sbjct: 176 VFDKLTQLKDLRLYQNQLKS-VPD 198
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 133 LTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELGG 191
LTNL + L GN+L KL L+ LVL +N+L+ S+PD + +L L L L
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAH 142
Query: 192 NKLSRSIPACFNNLIALRILSLGSNDPLPLEIG---NLKVLVGIDFSMNNFSGIIPKEIG 248
N+L F+ L L L L N L G L L + N +
Sbjct: 143 NQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202
Query: 249 GLKNLEYLFLGYN 261
L +L+Y++L N
Sbjct: 203 RLTSLQYIWLHDN 215
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 38/139 (27%)
Query: 187 LELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIG------NLKVLVGIDFSMNNF- 239
L LGGNKL + L L L L N L G NLK LV ++ + +
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP 125
Query: 240 SGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLS 299
G+ K L NL YL L +N+LQ L F +KL+
Sbjct: 126 DGVFDK----LTNLTYLNLAHNQLQSLPKGVF------------------------DKLT 157
Query: 300 YLEDLNLSFNKLEGEIPRG 318
L +L+LS+N+L+ +P G
Sbjct: 158 NLTELDLSYNQLQS-LPEG 175
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 33/199 (16%)
Query: 408 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN--------------LQCRR 452
EL ++ I G +G+V +G+ VA+K VFN C+R
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 453 AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG-----LVLEYMPQGSLEKHLYSTNCI 507
+ E ++ H N++ + + E LV E M + L + ++ +
Sbjct: 76 VLR----EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIV 130
Query: 508 LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567
+ M + L LH V+H DL P N+LL DN + DF +A+ E
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR----E 183
Query: 568 DQS-MTQTQTLATIGYMAP 585
D + +T + Y AP
Sbjct: 184 DTADANKTHYVTHRWYRAP 202
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 138 TIDLGGNKLNGSILITLSKLQK---LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKL 194
++DL N++ I+ S LQ+ LQ LVL N + D L L L+L N L
Sbjct: 56 SLDLSNNRIT---YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112
Query: 195 SRSIPACFNNLIALRILSLGSNDPLPL-------EIGNLKVL-VGIDFSMNNFSGIIPKE 246
S + F L +L L+L N L + L++L VG +M+ F+ I K+
Sbjct: 113 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG---NMDTFTKIQRKD 169
Query: 247 IGGLKNLEYLFLGYNRLQGLIPDSF 271
GL LE L + + LQ P S
Sbjct: 170 FAGLTFLEELEIDASDLQSYEPKSL 194
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 114 DFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKL-EG 172
DFQ N + + L NLI +D+ + + L L+ L + N E
Sbjct: 426 DFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 484
Query: 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVG- 231
+PD L L L+L +L + P FN+L +L++L++ N+ L+ K L
Sbjct: 485 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544
Query: 232 --IDFSMNN 238
+D+S+N+
Sbjct: 545 QVLDYSLNH 553
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 118 HNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160
HN + +PE NLTNL +DL NK+ L L ++
Sbjct: 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 33/199 (16%)
Query: 408 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN--------------LQCRR 452
EL ++ I G +G+V +G+ VA+K VFN C+R
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 453 AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG-----LVLEYMPQGSLEKHLYSTNCI 507
+ E ++ H N++ + + E LV E M + L + ++ +
Sbjct: 76 VLR----EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIV 130
Query: 508 LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567
+ M + L LH V+H DL P N+LL DN + DF +A+ E
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR----E 183
Query: 568 DQS-MTQTQTLATIGYMAP 585
D + +T + Y AP
Sbjct: 184 DTADANKTHYVTHRWYRAP 202
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 31/174 (17%)
Query: 411 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-- 467
+ D F + G+G FG+V + GM VA+K R F+ + E +IM+ +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FR--NRELQIMQDLAV 75
Query: 468 -RHRNLIKVISSC-------SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRL----N 515
H N++++ S + + +V+EY+P +L + C + ++R
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHR------CCRNYYRRQVAPPP 128
Query: 516 IMIDVASALEYLHFGC----STPVIHCDLKPSNVLLDD-NMIAYLSDFGIAKLL 564
I+I V GC S V H D+KP NVL+++ + L DFG AK L
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 114 DFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKL-EG 172
DFQ N + + L NLI +D+ + + L L+ L + N E
Sbjct: 402 DFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVG- 231
+PD L L L+L +L + P FN+L +L++L++ N+ L+ K L
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 520
Query: 232 --IDFSMNN 238
+D+S+N+
Sbjct: 521 QVLDYSLNH 529
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 118 HNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160
HN + +PE NLTNL +DL NK+ L L ++
Sbjct: 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 63/177 (35%)
Query: 416 FSENNLIGRGGFGSVYKA----RLGDGMEVAVK-----------VFNLQC---------- 450
F + IG G F SVY A ++G ++A+K LQC
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNV 82
Query: 451 ---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCI 507
+ F+ D M + H + + +++S S +E V EYM
Sbjct: 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE----VREYM--------------- 123
Query: 508 LDIFQRLNIMIDVASALEYLH-FGCSTPVIHCDLKPSNVLLDDNMIAY-LSDFGIAK 562
L++F+ AL+ +H FG ++H D+KPSN L + + Y L DFG+A+
Sbjct: 124 LNLFK----------ALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 198 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 255 LPLKWMAP 262
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 518 IDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTL 577
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 200 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 578 ATIGYMAP 585
+ +MAP
Sbjct: 257 LPLKWMAP 264
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 580 IGYMAP 585
+ +MAP
Sbjct: 264 LKWMAP 269
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 520 VASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLAT 579
VA +E+L S IH DL N+LL + + + DFG+A+ + + + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 580 IGYMAP 585
+ +MAP
Sbjct: 266 LKWMAP 271
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 114 DFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKL-EG 172
DFQ N + + L NLI +D+ + + L L+ L + N E
Sbjct: 107 DFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165
Query: 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVG- 231
+PD L L L+L +L + P FN+L +L++L++ N+ L+ K L
Sbjct: 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225
Query: 232 --IDFSMNNFSGIIPKEIGGL-KNLEYLFLGYN 261
+D+S+N+ +E+ +L +L L N
Sbjct: 226 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 138 TIDLGGNKLNGSILITLSKLQK---LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKL 194
++DL N++ I+ S LQ+ LQ LVL N + D L L L+L N L
Sbjct: 30 SLDLSNNRIT---YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 86
Query: 195 SRSIPACFNNLIALRILSLGSNDPLPL-------EIGNLKVL-VGIDFSMNNFSGIIPKE 246
S + F L +L L+L N L + L++L VG +M+ F+ I K+
Sbjct: 87 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG---NMDTFTKIQRKD 143
Query: 247 IGGLKNLEYLFLGYNRLQGLIPDSF 271
GL LE L + + LQ P S
Sbjct: 144 FAGLTFLEELEIDASDLQSYEPKSL 168
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 159 KLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDP 218
+L L + +NK+ P + L +L LE+G N++S I A +L L+ L++GSN
Sbjct: 222 RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS-DINAV-KDLTKLKXLNVGSNQI 277
Query: 219 LPLEI-GNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIP 268
+ + NL L + + N + IGGL NL LFL N + + P
Sbjct: 278 SDISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 104/265 (39%), Gaps = 69/265 (26%)
Query: 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELV 65
+ NL LE LD+ NK VS + +L +L NLE L+
Sbjct: 172 LANLTTLERLDISSNK-----------VSDISVLA----------------KLTNLESLI 204
Query: 66 LWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSH-SLEDFQMHNCNVTG 124
+NN + I P + NL SL Q+ +
Sbjct: 205 -------------------------ATNNQISDITPLGILTNLDELSLNGNQLKDIGT-- 237
Query: 125 DIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVEL 184
+ +LTNL +DL N++ S L LS L KL L L N++ P + L L
Sbjct: 238 -----LASLTNLTDLDLANNQI--SNLAPLSGLTKLTELKLGANQISNISP--LAGLTAL 288
Query: 185 YKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE-IGNLKVLVGIDFSMNNFSGII 243
LEL N+L P +NL L L+L N+ + + +L L + F+ N S +
Sbjct: 289 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDV- 345
Query: 244 PKEIGGLKNLEYLFLGYNRLQGLIP 268
+ L N+ +L G+N++ L P
Sbjct: 346 -SSLANLTNINWLSAGHNQISDLTP 369
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 103 TSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQG 162
+S+ L SL H + T E I + ++L N L GS+ L K++
Sbjct: 403 SSLETLDVSLNSLNSHAYDRTCAWAESI------LVLNLSSNMLTGSVFRCLPP--KVKV 454
Query: 163 LVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIP-ACFNNLIALRILSLGSN 216
L L +N++ SIP D+ L L +L + N+L +S+P F+ L +L+ + L N
Sbjct: 455 LDLHNNRI-MSIPKDVTHLQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLHDN 507
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 32/171 (18%)
Query: 7 GNLQNLEELDLRQNKLIGTVPVAIF--NVSTLKLLGLQDNSLSGSLSSITDVRLPNLEEL 64
L+ L+ L L++N L VA+ N+S+L+ L + NSL+ +
Sbjct: 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHA----------YDRT 423
Query: 65 VLWGXXXXXXXXXXXXXXCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTG 124
W +S+ V+ LS+N L G + + L ++ +HN N
Sbjct: 424 CAWA---------------ESILVLNLSSNMLTGSVFRC----LPPKVKVLDLHN-NRIM 463
Query: 125 DIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIP 175
IP+++ +L L +++ N+L +L LQ + L DN + + P
Sbjct: 464 SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFN-VSTLKLLGLQDN 44
IP ++ +LQ L+EL++ N+L +VP +F+ +++L+ + L DN
Sbjct: 465 IPKDVTHLQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLHDN 507
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 136 LITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICR-LVELYKLELGGNK- 193
L+T++L N ++ T S L +L+ L L N++E + R L ++++ L NK
Sbjct: 383 LLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKY 442
Query: 194 --LSRSIPACFNNL--IALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGG 249
LS S A +L + LR ++L + D P L+ L +D S NN + I + G
Sbjct: 443 LQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEG 502
Query: 250 LKNLEYLFLGYNRLQGLIPDSFGXXXXXXXXXXXXXXXXGAIPASLEKLSYLEDLNLSFN 309
L+NLE L +N L L + G L+ LS+L LNL N
Sbjct: 503 LENLEILDFQHNNLARLWKRA----------------NPGGPVNFLKGLSHLHILNLESN 546
Query: 310 KLEGEIPRG 318
L+ EIP G
Sbjct: 547 GLD-EIPVG 554
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 36/220 (16%)
Query: 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNK 145
L V+ L +N L I +T + +L + + + ++ N NLI +DL N
Sbjct: 75 LKVLNLQHNELSQISDQTFV--FCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNG 132
Query: 146 LNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRL--VELYKLELGGNKLSRSIPACFN 203
L+ + L T +L+ LQ L+L NK+ +++ L L KL+L N L P CF
Sbjct: 133 LSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQ 192
Query: 204 NLIALRILSLGS-------NDPLPLEIGNLKV-------------------------LVG 231
+ L L L + + L E+ N + L
Sbjct: 193 TIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQ 252
Query: 232 IDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271
+D S NN + L +L YL L YN +Q L P SF
Sbjct: 253 LDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSF 292
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 420 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISS 478
++G G G+V G VAVK + C A + E S H N+I+ S
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCS 77
Query: 479 CSNEEFKGLVLEYMP---QGSLE-KHLYSTNCILDI-FQRLNIMIDVASALEYLHFGCST 533
+ + F + LE Q +E K++ N L + ++++ +AS + +LH S
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 534 PVIHCDLKPSNVLLD-------------DNMIAYLSDFGIAKLLIGEDQSMTQT---QTL 577
+IH DLKP N+L+ +N+ +SDFG+ K L QS +T
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL-DSGQSSFRTNLNNPS 193
Query: 578 ATIGYMAP 585
T G+ AP
Sbjct: 194 GTSGWRAP 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,557,912
Number of Sequences: 62578
Number of extensions: 683933
Number of successful extensions: 3864
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 356
Number of HSP's that attempted gapping in prelim test: 1694
Number of HSP's gapped (non-prelim): 1406
length of query: 585
length of database: 14,973,337
effective HSP length: 104
effective length of query: 481
effective length of database: 8,465,225
effective search space: 4071773225
effective search space used: 4071773225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)