Query 047705
Match_columns 585
No_of_seqs 539 out of 4548
Neff 9.6
Searched_HMMs 29240
Date Tue Mar 26 00:41:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.6E-45 1.2E-49 411.5 26.4 342 2-349 310-751 (768)
2 2id5_A Lingo-1, leucine rich r 100.0 6.2E-42 2.1E-46 364.9 25.2 333 2-340 26-361 (477)
3 3rgz_A Protein brassinosteroid 100.0 2.4E-41 8.3E-46 380.4 25.1 335 1-339 284-721 (768)
4 3v47_A TOLL-like receptor 5B a 100.0 5.1E-41 1.7E-45 355.7 24.2 328 10-339 30-412 (455)
5 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-40 1.3E-44 374.5 26.5 332 3-339 66-564 (844)
6 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-39 7E-44 356.0 29.9 208 132-340 348-563 (606)
7 3v47_A TOLL-like receptor 5B a 100.0 8.5E-40 2.9E-44 346.3 23.4 315 2-318 46-414 (455)
8 3t6q_A CD180 antigen; protein- 100.0 7.2E-39 2.5E-43 351.7 25.8 279 56-339 275-564 (606)
9 4eco_A Uncharacterized protein 100.0 2.4E-39 8.2E-44 356.1 21.8 329 2-339 239-604 (636)
10 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-38 4.3E-43 346.3 26.0 324 2-339 46-514 (562)
11 2id5_A Lingo-1, leucine rich r 100.0 9.7E-39 3.3E-43 340.3 23.7 330 3-339 4-337 (477)
12 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-38 4.9E-43 342.8 23.3 158 179-339 321-485 (520)
13 2z63_A TOLL-like receptor 4, v 100.0 3.6E-38 1.2E-42 343.6 26.0 332 3-340 45-536 (570)
14 3vq2_A TLR4, TOLL-like recepto 100.0 4.5E-38 1.5E-42 345.4 26.9 313 3-319 73-565 (606)
15 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-39 1E-43 318.5 15.2 168 414-585 32-203 (311)
16 3t6q_A CD180 antigen; protein- 100.0 8.5E-38 2.9E-42 343.2 28.6 329 3-336 50-439 (606)
17 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-37 3.6E-42 347.1 28.4 337 3-340 239-627 (680)
18 2z63_A TOLL-like receptor 4, v 100.0 7.6E-38 2.6E-42 341.0 24.6 333 3-340 69-561 (570)
19 4b9d_A Serine/threonine-protei 100.0 1.5E-38 5E-43 318.8 14.5 168 413-585 23-194 (350)
20 4fih_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 316.8 15.6 165 414-585 74-239 (346)
21 4eco_A Uncharacterized protein 100.0 6.4E-38 2.2E-42 344.8 20.7 303 21-332 194-546 (636)
22 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-37 7.2E-42 336.0 24.2 168 3-172 43-210 (549)
23 2z7x_B TOLL-like receptor 1, v 100.0 2E-37 6.7E-42 333.9 22.8 304 3-318 38-487 (520)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-37 1.1E-41 335.2 24.5 306 3-319 69-517 (562)
25 4ecn_A Leucine-rich repeat pro 100.0 4.2E-37 1.4E-41 344.4 25.2 326 2-337 481-842 (876)
26 3o6n_A APL1; leucine-rich repe 100.0 1.7E-36 5.7E-41 314.4 25.5 312 8-338 43-355 (390)
27 4asz_A BDNF/NT-3 growth factor 100.0 4.5E-38 1.5E-42 310.9 12.8 169 414-585 13-199 (299)
28 4fie_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 318.8 16.6 165 414-585 151-316 (423)
29 3j0a_A TOLL-like receptor 5; m 100.0 2.4E-36 8.2E-41 343.2 27.4 309 1-314 18-377 (844)
30 1ziw_A TOLL-like receptor 3; i 100.0 4.7E-36 1.6E-40 333.8 28.8 311 3-317 265-627 (680)
31 4g8a_A TOLL-like receptor 4; l 100.0 8E-36 2.7E-40 329.1 30.1 183 157-339 370-584 (635)
32 3omv_A RAF proto-oncogene seri 100.0 1.9E-37 6.4E-42 306.4 14.9 167 413-585 35-203 (307)
33 4aoj_A High affinity nerve gro 100.0 1.8E-37 6.1E-42 310.9 14.4 169 414-585 41-229 (329)
34 4ecn_A Leucine-rich repeat pro 100.0 1.2E-36 4E-41 340.7 22.0 300 26-333 440-787 (876)
35 3hyh_A Carbon catabolite-derep 100.0 3.6E-37 1.2E-41 299.5 15.4 166 412-585 11-180 (275)
36 3oja_B Anopheles plasmodium-re 100.0 7.2E-36 2.5E-40 326.5 25.7 312 8-338 49-361 (597)
37 4fmz_A Internalin; leucine ric 100.0 1.6E-35 5.6E-40 301.9 26.1 305 6-334 40-345 (347)
38 3o6n_A APL1; leucine-rich repe 100.0 4.5E-36 1.5E-40 311.1 22.2 315 2-339 60-378 (390)
39 3fpq_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 298.3 16.8 161 417-585 29-199 (290)
40 4g3f_A NF-kappa-beta-inducing 100.0 3.9E-37 1.3E-41 307.1 12.8 164 413-585 57-225 (336)
41 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-36 2.2E-40 324.3 22.7 191 1-196 19-210 (549)
42 4gt4_A Tyrosine-protein kinase 100.0 6.3E-37 2.1E-41 304.0 13.5 169 414-585 26-216 (308)
43 3ubd_A Ribosomal protein S6 ki 100.0 1.5E-37 5E-42 306.4 8.3 166 414-585 24-195 (304)
44 4g31_A Eukaryotic translation 100.0 1.8E-36 6E-41 300.0 15.0 169 414-585 5-199 (299)
45 4fmz_A Internalin; leucine ric 100.0 6E-35 2E-39 297.7 25.4 285 5-312 61-346 (347)
46 3oja_B Anopheles plasmodium-re 100.0 1.8E-35 6.3E-40 323.3 22.5 315 2-339 66-384 (597)
47 1o6v_A Internalin A; bacterial 100.0 1.1E-34 3.6E-39 307.9 25.9 308 2-336 61-389 (466)
48 1ogq_A PGIP-2, polygalacturona 100.0 2.3E-35 8E-40 295.9 19.6 255 59-340 50-309 (313)
49 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-34 3.7E-39 320.0 22.7 314 3-319 69-587 (635)
50 2ft3_A Biglycan; proteoglycan, 100.0 3.3E-34 1.1E-38 290.3 24.1 285 11-310 34-331 (332)
51 1xku_A Decorin; proteoglycan, 100.0 1.3E-33 4.4E-38 285.8 26.8 287 10-310 31-330 (330)
52 3hmm_A TGF-beta receptor type- 100.0 4.2E-35 1.4E-39 291.5 15.1 168 414-585 3-181 (303)
53 1o6v_A Internalin A; bacterial 100.0 1.2E-33 4.2E-38 299.7 25.8 290 2-315 83-391 (466)
54 4ase_A Vascular endothelial gr 100.0 4.2E-35 1.4E-39 296.0 13.3 179 404-585 54-256 (353)
55 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-34 7.2E-39 288.9 17.2 255 34-316 50-308 (313)
56 1xku_A Decorin; proteoglycan, 100.0 3.6E-33 1.2E-37 282.5 25.6 273 2-286 46-330 (330)
57 3bz5_A Internalin-J, INLJ; leu 100.0 3.4E-33 1.2E-37 294.4 24.9 303 3-335 35-352 (457)
58 2ft3_A Biglycan; proteoglycan, 100.0 3E-33 1E-37 283.2 22.0 272 2-286 48-331 (332)
59 4b99_A Mitogen-activated prote 100.0 4E-34 1.4E-38 293.9 15.4 167 414-585 54-231 (398)
60 3v5w_A G-protein coupled recep 100.0 6.4E-34 2.2E-38 304.7 16.5 165 413-585 188-359 (689)
61 3bz5_A Internalin-J, INLJ; leu 100.0 2.9E-32 1E-36 287.3 25.7 279 2-313 57-353 (457)
62 4f9c_A Cell division cycle 7-r 100.0 2.8E-33 9.4E-38 284.6 14.2 146 411-565 18-169 (361)
63 3uto_A Twitchin; kinase, muscl 100.0 4.7E-33 1.6E-37 300.0 16.8 167 413-585 156-325 (573)
64 3zyi_A Leucine-rich repeat-con 100.0 1.4E-31 4.8E-36 282.7 23.9 252 61-318 56-309 (452)
65 3zyj_A Leucine-rich repeat-con 100.0 1.7E-31 6E-36 281.0 24.1 252 36-318 45-298 (440)
66 2z66_A Variable lymphocyte rec 100.0 4.3E-32 1.5E-36 271.5 18.2 275 37-340 10-292 (306)
67 2z80_A TOLL-like receptor 2, v 100.0 2.2E-32 7.5E-37 279.4 13.1 277 13-317 34-319 (353)
68 1jl5_A Outer protein YOPM; leu 100.0 2.8E-31 9.5E-36 279.5 19.6 291 1-335 25-330 (454)
69 4aw2_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36 283.3 13.2 177 405-585 65-245 (437)
70 2z80_A TOLL-like receptor 2, v 100.0 2.3E-31 8E-36 271.8 17.1 269 1-292 45-318 (353)
71 1ozn_A Reticulon 4 receptor; N 100.0 3.7E-31 1.3E-35 261.9 15.9 252 62-340 14-266 (285)
72 2z66_A Variable lymphocyte rec 100.0 7.4E-31 2.5E-35 262.5 18.1 278 12-317 9-292 (306)
73 1jl5_A Outer protein YOPM; leu 100.0 8.7E-30 3E-34 268.1 26.0 264 10-313 131-410 (454)
74 3zyi_A Leucine-rich repeat-con 100.0 1.5E-29 5E-34 267.3 24.0 245 36-289 56-304 (452)
75 3zyj_A Leucine-rich repeat-con 100.0 2.1E-29 7.1E-34 265.2 25.0 256 3-288 36-292 (440)
76 2vd5_A DMPK protein; serine/th 100.0 1.7E-30 5.7E-35 269.4 15.4 177 405-585 52-232 (412)
77 3fe3_A MAP/microtubule affinit 100.0 2.8E-30 9.5E-35 260.4 16.1 169 410-585 11-182 (328)
78 3fxz_A Serine/threonine-protei 100.0 7.4E-30 2.5E-34 254.0 18.4 166 413-585 19-185 (297)
79 1o6l_A RAC-beta serine/threoni 100.0 4.1E-30 1.4E-34 259.9 16.5 167 413-585 4-174 (337)
80 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.9E-30 1.3E-34 261.9 16.2 169 411-585 20-193 (353)
81 3v8s_A RHO-associated protein 100.0 2.1E-30 7.3E-35 268.4 14.3 173 407-585 62-238 (410)
82 3s95_A LIMK-1, LIM domain kina 100.0 6.2E-30 2.1E-34 256.3 17.2 170 413-585 9-191 (310)
83 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-29 5.1E-34 250.4 19.3 254 36-318 13-267 (285)
84 2qkw_B Protein kinase; three-h 100.0 2.7E-30 9.1E-35 260.3 13.0 179 404-585 29-210 (321)
85 3zgw_A Maternal embryonic leuc 100.0 6.8E-30 2.3E-34 259.2 14.8 169 412-585 8-178 (347)
86 1xjd_A Protein kinase C, theta 100.0 1.1E-29 3.6E-34 257.6 16.1 171 409-585 12-187 (345)
87 4dc2_A Protein kinase C IOTA t 100.0 8.5E-30 2.9E-34 262.5 15.2 168 412-585 50-222 (396)
88 4fcg_A Uncharacterized protein 100.0 5E-29 1.7E-33 251.4 20.6 225 59-312 81-314 (328)
89 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-29 5.6E-34 253.6 16.9 164 413-585 5-172 (318)
90 4fr4_A YANK1, serine/threonine 100.0 1.2E-29 4.2E-34 260.4 16.0 165 414-585 15-183 (384)
91 3tki_A Serine/threonine-protei 100.0 1E-29 3.4E-34 256.1 15.0 169 413-585 6-176 (323)
92 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-28 8E-33 265.1 26.8 261 10-317 40-302 (622)
93 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-32 4.6E-37 291.5 -6.9 329 6-334 24-410 (461)
94 3a8x_A Protein kinase C IOTA t 100.0 2E-29 6.8E-34 256.0 16.1 167 413-585 8-179 (345)
95 2c30_A Serine/threonine-protei 100.0 3.2E-29 1.1E-33 252.3 17.4 177 402-585 23-210 (321)
96 2psq_A Fibroblast growth facto 100.0 1.9E-29 6.5E-34 258.9 15.7 170 413-585 80-274 (370)
97 2yab_A Death-associated protei 100.0 3.1E-29 1E-33 255.9 16.9 167 412-585 10-187 (361)
98 2i0e_A Protein kinase C-beta I 100.0 2.1E-29 7.1E-34 256.3 15.1 169 411-585 17-190 (353)
99 1tki_A Titin; serine kinase, m 100.0 3.7E-29 1.3E-33 251.7 16.7 166 413-585 4-172 (321)
100 3o53_A Protein LRIM1, AGAP0063 100.0 1.3E-30 4.6E-35 261.9 5.9 268 10-316 10-280 (317)
101 4fcg_A Uncharacterized protein 100.0 1.6E-28 5.5E-33 247.6 21.1 234 10-288 81-314 (328)
102 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-29 9.4E-34 255.4 15.6 164 413-585 40-207 (350)
103 4eqm_A Protein kinase; transfe 100.0 3E-29 1E-33 249.3 15.5 168 413-585 10-181 (294)
104 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-31 4E-36 284.3 -2.1 310 2-314 48-413 (461)
105 3niz_A Rhodanese family protei 100.0 3.4E-29 1.2E-33 250.9 15.8 168 412-585 19-188 (311)
106 3uim_A Brassinosteroid insensi 100.0 1.9E-29 6.4E-34 254.7 13.8 182 400-585 16-204 (326)
107 3o53_A Protein LRIM1, AGAP0063 100.0 1.4E-30 4.8E-35 261.8 4.6 249 5-292 29-280 (317)
108 3kul_A Ephrin type-A receptor 100.0 4.4E-29 1.5E-33 251.7 15.5 169 414-585 49-223 (325)
109 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-29 1.1E-33 257.1 14.2 168 412-585 63-254 (365)
110 3qd2_B Eukaryotic translation 100.0 6.1E-29 2.1E-33 251.4 16.0 170 413-585 5-245 (332)
111 1kob_A Twitchin; kinase, intra 100.0 8.6E-29 3E-33 254.9 17.3 167 413-585 50-219 (387)
112 3o0g_A Cell division protein k 100.0 8.5E-29 2.9E-33 245.8 16.6 166 414-585 2-170 (292)
113 3soc_A Activin receptor type-2 100.0 4.9E-29 1.7E-33 251.1 14.9 166 413-585 23-202 (322)
114 3a62_A Ribosomal protein S6 ki 100.0 4.2E-29 1.4E-33 252.1 13.9 167 413-585 16-190 (327)
115 3soa_A Calcium/calmodulin-depe 100.0 6.9E-29 2.4E-33 260.0 15.8 168 412-585 9-182 (444)
116 3c0i_A Peripheral plasma membr 100.0 5.2E-29 1.8E-33 253.9 14.5 167 414-585 24-202 (351)
117 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.4E-29 2.2E-33 251.0 14.8 166 412-585 7-176 (336)
118 1wwl_A Monocyte differentiatio 100.0 3.1E-30 1.1E-34 258.6 5.0 243 58-313 42-310 (312)
119 2nru_A Interleukin-1 receptor- 100.0 2.4E-28 8.1E-33 244.4 18.6 181 401-585 12-204 (307)
120 4hcu_A Tyrosine-protein kinase 100.0 5.2E-29 1.8E-33 244.2 13.5 168 413-585 9-176 (269)
121 2bdw_A Hypothetical protein K1 100.0 9.6E-29 3.3E-33 252.8 15.8 166 413-585 28-199 (362)
122 2r5t_A Serine/threonine-protei 100.0 4.2E-29 1.4E-33 255.9 13.1 167 413-585 37-208 (373)
123 1ob3_A PFPK5, cell division co 100.0 4.4E-29 1.5E-33 247.4 12.9 166 414-585 2-169 (288)
124 3oja_A Leucine-rich immune mol 100.0 2.2E-29 7.6E-34 267.6 11.4 234 35-307 35-270 (487)
125 2zv2_A Calcium/calmodulin-depe 100.0 9E-29 3.1E-33 246.4 15.1 167 412-585 11-206 (298)
126 2acx_A G protein-coupled recep 100.0 1.1E-28 3.8E-33 263.7 16.7 167 413-585 183-354 (576)
127 3sxs_A Cytoplasmic tyrosine-pr 100.0 1E-28 3.5E-33 242.0 15.2 168 413-585 7-174 (268)
128 3p86_A Serine/threonine-protei 100.0 5E-29 1.7E-33 249.4 13.0 173 407-585 30-208 (309)
129 3cbl_A C-FES, proto-oncogene t 100.0 3.1E-29 1.1E-33 258.2 11.8 171 412-585 112-284 (377)
130 2y0a_A Death-associated protei 100.0 1.3E-28 4.4E-33 248.4 16.0 165 414-585 11-186 (326)
131 3vhe_A Vascular endothelial gr 100.0 5.9E-29 2E-33 254.6 13.7 181 402-585 10-264 (359)
132 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-28 5.7E-33 261.8 16.9 168 413-585 184-358 (543)
133 2y94_A 5'-AMP-activated protei 100.0 2E-28 6.9E-33 258.1 17.1 166 413-585 15-184 (476)
134 1wwl_A Monocyte differentiatio 100.0 7E-30 2.4E-34 256.0 5.3 250 8-289 41-310 (312)
135 2qol_A Ephrin receptor; recept 100.0 8.6E-29 3E-33 254.2 13.4 169 414-585 45-219 (373)
136 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-27 7.7E-32 257.4 24.9 255 1-299 54-308 (622)
137 2x4f_A Myosin light chain kina 100.0 1.8E-28 6.1E-33 251.8 15.3 162 418-585 93-257 (373)
138 3rp9_A Mitogen-activated prote 100.0 1.1E-28 3.8E-33 261.0 14.1 168 413-585 52-252 (458)
139 1luf_A Muscle-specific tyrosin 100.0 8.9E-29 3E-33 251.5 12.8 174 409-585 42-245 (343)
140 3ugc_A Tyrosine-protein kinase 100.0 6.2E-29 2.1E-33 247.2 11.4 170 413-585 9-186 (295)
141 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-28 5.8E-33 246.6 14.6 168 412-585 3-177 (317)
142 4ejn_A RAC-alpha serine/threon 100.0 5.6E-29 1.9E-33 262.2 11.5 167 413-585 147-318 (446)
143 3tt0_A Basic fibroblast growth 100.0 2.1E-28 7.2E-33 252.5 15.3 170 413-585 68-262 (382)
144 3uc3_A Serine/threonine-protei 100.0 1.8E-28 6E-33 250.8 14.5 166 412-585 18-186 (361)
145 3p1a_A MYT1 kinase, membrane-a 100.0 9.3E-29 3.2E-33 247.8 11.9 165 414-585 57-225 (311)
146 3n9x_A Phosphotransferase; mal 100.0 2.4E-28 8.3E-33 256.1 15.6 168 413-585 25-220 (432)
147 3gen_A Tyrosine-protein kinase 100.0 1.4E-28 5E-33 242.9 13.0 169 412-585 22-190 (283)
148 2izr_A Casein kinase I isoform 100.0 2.3E-28 7.8E-33 247.2 14.6 167 413-585 8-186 (330)
149 3oja_A Leucine-rich immune mol 100.0 3.7E-29 1.3E-33 265.9 9.1 243 2-283 22-270 (487)
150 3gni_B Strad alpha; kinase fol 100.0 4.9E-28 1.7E-32 250.5 17.1 171 412-585 23-204 (389)
151 3lb7_A RAF proto-oncogene seri 100.0 3.5E-28 1.2E-32 243.0 15.5 168 412-585 34-203 (307)
152 4euu_A Serine/threonine-protei 100.0 3.5E-28 1.2E-32 244.6 15.5 166 414-585 9-184 (319)
153 3l9p_A Anaplastic lymphoma kin 100.0 7.6E-29 2.6E-33 254.2 10.9 169 414-585 71-255 (367)
154 3f3z_A Calcium/calmodulin-depe 100.0 4.2E-28 1.5E-32 238.8 15.8 166 413-585 8-177 (277)
155 3cok_A Serine/threonine-protei 100.0 4.8E-28 1.6E-32 238.5 15.7 170 411-585 8-181 (278)
156 1rjb_A FL cytokine receptor; k 100.0 3E-28 1E-32 247.8 14.3 172 411-585 42-243 (344)
157 3ork_A Serine/threonine protei 100.0 7.4E-29 2.5E-33 248.6 9.6 169 413-585 11-188 (311)
158 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-28 1.1E-32 244.3 14.0 171 412-585 21-221 (314)
159 3dbq_A Dual specificity protei 100.0 3.5E-28 1.2E-32 247.1 13.9 167 413-585 8-178 (343)
160 4fvq_A Tyrosine-protein kinase 100.0 2.6E-28 8.9E-33 241.8 12.2 164 413-585 7-186 (289)
161 2z62_A TOLL-like receptor 4, v 100.0 1.4E-27 4.8E-32 235.0 17.3 229 63-318 11-243 (276)
162 2yex_A Serine/threonine-protei 100.0 7E-28 2.4E-32 237.0 15.1 169 413-585 6-176 (276)
163 2pvf_A Fibroblast growth facto 100.0 7.2E-28 2.5E-32 243.9 15.5 170 413-585 34-228 (334)
164 3poz_A Epidermal growth factor 100.0 2.5E-28 8.7E-33 246.5 12.1 168 414-585 15-188 (327)
165 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-28 2.3E-32 265.5 16.3 169 411-585 338-511 (674)
166 2zmd_A Dual specificity protei 100.0 6.7E-28 2.3E-32 249.1 15.3 166 414-585 56-225 (390)
167 3kex_A Receptor tyrosine-prote 99.9 2.2E-28 7.6E-33 246.7 11.4 168 414-585 13-186 (325)
168 3fdn_A Serine/threonine-protei 99.9 8.3E-28 2.8E-32 237.0 15.1 165 413-585 8-176 (279)
169 1t46_A HOMO sapiens V-KIT hard 99.9 4.8E-28 1.6E-32 242.8 13.5 171 412-585 21-216 (313)
170 2w4o_A Calcium/calmodulin-depe 99.9 5.2E-28 1.8E-32 246.3 13.9 164 413-585 52-219 (349)
171 2vuw_A Serine/threonine-protei 99.9 3.3E-29 1.1E-33 254.0 5.1 161 413-585 19-246 (336)
172 4agu_A Cyclin-dependent kinase 99.9 9.2E-28 3.2E-32 240.6 15.4 167 413-585 2-171 (311)
173 3kn6_A Ribosomal protein S6 ki 99.9 6.9E-28 2.3E-32 242.9 14.5 158 419-585 16-178 (325)
174 3dls_A PAS domain-containing s 99.9 3.1E-28 1.1E-32 246.5 11.9 167 412-585 22-198 (335)
175 3oz6_A Mitogen-activated prote 99.9 8.2E-28 2.8E-32 248.7 15.2 169 411-585 6-199 (388)
176 4e5w_A Tyrosine-protein kinase 99.9 7.3E-28 2.5E-32 240.2 14.2 169 414-585 21-198 (302)
177 1p4o_A Insulin-like growth fac 99.9 2.1E-28 7.2E-33 246.5 10.3 179 404-585 15-209 (322)
178 3kk8_A Calcium/calmodulin depe 99.9 2E-27 6.8E-32 234.8 17.1 166 413-585 5-176 (284)
179 2a2a_A Death-associated protei 99.9 9.7E-28 3.3E-32 241.6 15.0 166 413-585 11-187 (321)
180 1u5q_A Serine/threonine protei 99.9 9.6E-28 3.3E-32 244.0 15.0 162 414-585 54-219 (348)
181 1ua2_A CAK, cell division prot 99.9 5.6E-28 1.9E-32 245.9 13.3 171 409-585 5-181 (346)
182 2qr7_A Ribosomal protein S6 ki 99.9 5.8E-28 2E-32 244.9 13.3 164 412-585 20-189 (342)
183 2ac3_A MAP kinase-interacting 99.9 1.1E-27 3.8E-32 240.5 15.3 169 413-585 11-190 (316)
184 3lxl_A Tyrosine-protein kinase 99.9 7.5E-28 2.6E-32 243.1 13.8 169 414-585 23-199 (327)
185 2rku_A Serine/threonine-protei 99.9 2.3E-27 7.9E-32 235.7 17.0 166 414-585 15-184 (294)
186 3qup_A Tyrosine-protein kinase 99.9 4.8E-28 1.6E-32 244.0 12.1 172 411-585 20-208 (323)
187 3t9t_A Tyrosine-protein kinase 99.9 6.4E-28 2.2E-32 236.0 12.7 168 413-585 7-174 (267)
188 3is5_A Calcium-dependent prote 99.9 7.9E-28 2.7E-32 237.9 13.3 166 414-585 22-195 (285)
189 3hko_A Calcium/calmodulin-depe 99.9 8.4E-28 2.9E-32 244.6 13.9 174 409-585 21-243 (345)
190 2eue_A Carbon catabolite derep 99.9 1.2E-27 4E-32 235.4 14.5 165 413-585 12-180 (275)
191 3mtl_A Cell division protein k 99.9 3.7E-28 1.3E-32 244.9 11.0 166 414-585 2-169 (324)
192 1vzo_A Ribosomal protein S6 ki 99.9 3.6E-28 1.2E-32 248.1 11.1 168 413-585 53-229 (355)
193 2owb_A Serine/threonine-protei 99.9 2.1E-27 7.1E-32 240.6 16.5 167 413-585 40-210 (335)
194 2i1m_A Macrophage colony-stimu 99.9 4.9E-28 1.7E-32 245.1 11.9 174 409-585 41-235 (333)
195 4eut_A Serine/threonine-protei 99.9 1E-27 3.5E-32 248.6 14.1 166 414-585 9-184 (396)
196 2z62_A TOLL-like receptor 4, v 99.9 1.1E-26 3.9E-31 228.5 20.8 213 59-292 28-241 (276)
197 3i6u_A CDS1, serine/threonine- 99.9 1.1E-27 3.7E-32 250.0 14.2 167 411-585 132-310 (419)
198 2xir_A Vascular endothelial gr 99.9 7.6E-28 2.6E-32 241.7 12.6 180 403-585 16-219 (316)
199 1csn_A Casein kinase-1; phosph 99.9 3.6E-27 1.2E-31 234.6 17.1 167 413-585 9-187 (298)
200 3mwu_A Calmodulin-domain prote 99.9 1.2E-27 4.2E-32 254.8 14.5 166 413-585 21-192 (486)
201 3og7_A AKAP9-BRAF fusion prote 99.9 8.1E-28 2.8E-32 238.4 12.2 167 413-585 23-191 (289)
202 1mp8_A Focal adhesion kinase 1 99.9 8.3E-28 2.8E-32 237.3 12.3 168 413-585 14-186 (281)
203 3q4u_A Activin receptor type-1 99.9 2.5E-27 8.6E-32 236.1 15.7 167 413-585 7-186 (301)
204 2y7j_A Phosphorylase B kinase 99.9 2.8E-27 9.7E-32 242.4 16.5 170 409-585 89-268 (365)
205 2j7t_A Serine/threonine-protei 99.9 5.6E-28 1.9E-32 241.0 10.9 169 412-585 17-186 (302)
206 4f0f_A Serine/threonine-protei 99.9 2.4E-27 8.2E-32 234.7 15.4 162 414-585 19-195 (287)
207 3llt_A Serine/threonine kinase 99.9 1.7E-27 5.8E-32 243.9 14.6 175 401-585 22-228 (360)
208 3q5i_A Protein kinase; CDPK, m 99.9 2.9E-27 1E-31 253.0 17.0 167 412-585 34-217 (504)
209 2o6q_A Variable lymphocyte rec 99.9 2E-26 6.9E-31 225.9 21.6 207 85-317 17-223 (270)
210 3lij_A Calcium/calmodulin depe 99.9 1.6E-27 5.3E-32 254.4 14.7 165 414-585 37-207 (494)
211 2vgo_A Serine/threonine-protei 99.9 3.3E-27 1.1E-31 233.4 15.8 165 413-585 13-181 (284)
212 3ttj_A Mitogen-activated prote 99.9 1.1E-27 3.6E-32 253.0 13.0 164 412-585 60-232 (464)
213 3g33_A Cell division protein k 99.9 3.7E-27 1.3E-31 235.8 15.9 167 412-585 7-188 (308)
214 1nxk_A MAP kinase-activated pr 99.9 2.6E-27 9E-32 245.4 15.1 162 413-585 60-232 (400)
215 1zy4_A Serine/threonine-protei 99.9 2.4E-27 8E-32 236.4 14.1 169 413-585 5-199 (303)
216 1qcf_A Haematopoetic cell kina 99.9 9.1E-28 3.1E-32 253.3 11.6 169 411-585 185-354 (454)
217 1x8b_A WEE1HU, WEE1-like prote 99.9 3.8E-27 1.3E-31 233.1 15.3 164 413-585 10-199 (289)
218 3nyv_A Calmodulin-domain prote 99.9 1.4E-27 4.8E-32 254.4 13.0 165 414-585 26-197 (484)
219 3pg1_A Mitogen-activated prote 99.9 2.1E-27 7.3E-32 243.3 13.9 174 405-585 13-202 (362)
220 2h6d_A 5'-AMP-activated protei 99.9 4.3E-27 1.5E-31 231.4 15.5 167 412-585 9-179 (276)
221 3kfa_A Tyrosine-protein kinase 99.9 7.5E-28 2.6E-32 238.4 10.1 171 410-585 9-181 (288)
222 1phk_A Phosphorylase kinase; g 99.9 6.6E-27 2.3E-31 232.8 17.0 168 411-585 14-192 (298)
223 3op5_A Serine/threonine-protei 99.9 1.4E-27 4.9E-32 244.7 12.5 169 413-585 34-230 (364)
224 1opk_A P150, C-ABL, proto-onco 99.9 1.5E-27 5E-32 254.3 12.9 168 413-585 219-388 (495)
225 2jam_A Calcium/calmodulin-depe 99.9 2.3E-27 7.9E-32 236.9 13.5 165 413-585 8-176 (304)
226 3f66_A Hepatocyte growth facto 99.9 2.7E-27 9.1E-32 235.7 13.9 169 414-585 25-201 (298)
227 3bhy_A Death-associated protei 99.9 4.1E-27 1.4E-31 232.4 15.1 165 414-585 5-180 (283)
228 1k9a_A Carboxyl-terminal SRC k 99.9 3E-27 1E-31 249.0 15.0 163 412-585 191-355 (450)
229 3mi9_A Cell division protein k 99.9 2.8E-27 9.7E-32 241.3 14.4 169 413-585 16-197 (351)
230 2w1i_A JAK2; chromosomal rearr 99.9 3.1E-27 1E-31 238.5 14.2 169 414-585 41-217 (326)
231 1cm8_A Phosphorylated MAP kina 99.9 2E-27 6.8E-32 243.6 13.0 162 413-585 24-194 (367)
232 4aaa_A Cyclin-dependent kinase 99.9 3E-27 1E-31 239.1 14.1 167 413-585 24-193 (331)
233 3eqc_A Dual specificity mitoge 99.9 1.5E-27 5.3E-32 244.1 12.0 164 414-585 33-199 (360)
234 3lzb_A Epidermal growth factor 99.9 1.3E-27 4.3E-32 241.3 11.2 169 413-585 14-188 (327)
235 3a7i_A MST3 kinase, serine/thr 99.9 7.2E-27 2.5E-31 233.2 16.6 165 414-585 22-188 (303)
236 3mdy_A Bone morphogenetic prot 99.9 7.2E-27 2.5E-31 236.8 16.8 168 409-585 32-215 (337)
237 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.2E-27 4.1E-32 241.7 11.0 170 409-585 29-206 (329)
238 1mqb_A Ephrin type-A receptor 99.9 3.6E-27 1.2E-31 238.6 14.4 169 414-585 44-219 (333)
239 2buj_A Serine/threonine-protei 99.9 2.7E-27 9.2E-32 237.9 13.3 170 413-585 28-212 (317)
240 1qpc_A LCK kinase; alpha beta 99.9 1.9E-27 6.5E-32 234.4 11.9 168 412-585 11-179 (279)
241 2h34_A Serine/threonine-protei 99.9 4E-27 1.4E-31 235.8 14.4 171 410-585 30-204 (309)
242 2clq_A Mitogen-activated prote 99.9 8E-27 2.7E-31 231.8 16.4 167 414-585 22-192 (295)
243 3dtc_A Mitogen-activated prote 99.9 3.5E-27 1.2E-31 231.4 13.5 163 413-585 6-183 (271)
244 3g2f_A Bone morphogenetic prot 99.9 5.3E-27 1.8E-31 237.7 15.1 165 412-585 11-197 (336)
245 3com_A Serine/threonine-protei 99.9 6.5E-27 2.2E-31 234.7 15.6 167 412-585 27-194 (314)
246 1u59_A Tyrosine-protein kinase 99.9 5.7E-27 1.9E-31 232.0 14.7 168 414-585 9-182 (287)
247 1t4h_A Serine/threonine-protei 99.9 1.1E-26 3.8E-31 230.3 16.8 163 415-585 27-199 (290)
248 3lxp_A Non-receptor tyrosine-p 99.9 1.1E-26 3.7E-31 233.6 16.8 165 416-585 33-206 (318)
249 2wtk_C Serine/threonine-protei 99.9 9.9E-27 3.4E-31 232.3 16.3 169 413-585 4-180 (305)
250 3kmu_A ILK, integrin-linked ki 99.9 4.6E-27 1.6E-31 230.4 13.4 162 413-585 9-177 (271)
251 2pml_X PFPK7, Ser/Thr protein 99.9 3.5E-27 1.2E-31 240.3 13.0 165 413-585 30-219 (348)
252 2wqm_A Serine/threonine-protei 99.9 8.8E-27 3E-31 233.3 15.4 169 412-585 30-205 (310)
253 2yfx_A Tyrosine-protein kinase 99.9 3.4E-27 1.2E-31 238.3 12.4 170 413-585 29-214 (327)
254 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 2.2E-27 7.4E-32 250.2 11.1 168 412-585 182-350 (452)
255 4azs_A Methyltransferase WBDD; 99.9 1.5E-27 5.2E-32 257.0 10.1 156 421-585 241-408 (569)
256 3pls_A Macrophage-stimulating 99.9 4.9E-27 1.7E-31 233.7 12.7 168 415-585 22-197 (298)
257 2vwi_A Serine/threonine-protei 99.9 1.8E-27 6.3E-32 237.3 9.6 174 409-585 10-195 (303)
258 2x7f_A TRAF2 and NCK-interacti 99.9 3.6E-27 1.2E-31 237.9 11.8 176 404-585 14-198 (326)
259 2ycf_A Serine/threonine-protei 99.9 5.6E-27 1.9E-31 236.1 13.0 165 413-585 9-185 (322)
260 3brb_A Proto-oncogene tyrosine 99.9 6E-27 2.1E-31 234.9 13.0 175 408-585 28-218 (313)
261 3c1x_A Hepatocyte growth facto 99.9 2.3E-27 7.9E-32 243.4 10.0 168 415-585 90-265 (373)
262 3qyz_A Mitogen-activated prote 99.9 1.1E-26 3.7E-31 238.2 14.9 168 412-585 25-200 (364)
263 2a19_B Interferon-induced, dou 99.9 6.2E-27 2.1E-31 231.2 12.7 162 414-585 11-190 (284)
264 3cc6_A Protein tyrosine kinase 99.9 6.8E-27 2.3E-31 230.7 12.9 168 413-585 11-183 (281)
265 1p9a_G Platelet glycoprotein I 99.9 6.9E-26 2.3E-30 224.1 20.0 207 80-316 6-212 (290)
266 1fvr_A Tyrosine-protein kinase 99.9 8.5E-27 2.9E-31 235.3 13.7 166 414-585 25-210 (327)
267 3eb0_A Putative uncharacterize 99.9 1.1E-26 3.6E-31 239.9 14.7 164 411-585 4-210 (383)
268 2r3i_A Cell division protein k 99.9 1E-26 3.4E-31 231.6 13.6 167 413-585 2-172 (299)
269 2w5a_A Serine/threonine-protei 99.9 3.6E-27 1.2E-31 232.3 10.3 168 413-585 5-185 (279)
270 2xrw_A Mitogen-activated prote 99.9 1.4E-26 4.9E-31 237.8 15.0 163 413-585 24-195 (371)
271 2eva_A TAK1 kinase - TAB1 chim 99.9 9E-27 3.1E-31 232.9 13.1 162 414-585 8-172 (307)
272 3fme_A Dual specificity mitoge 99.9 8.5E-27 2.9E-31 231.0 12.7 166 413-585 6-178 (290)
273 3gxj_A TGF-beta receptor type- 99.9 1.4E-27 4.9E-32 238.1 7.2 166 414-585 3-181 (303)
274 3an0_A Dual specificity mitoge 99.9 8.8E-27 3E-31 236.5 13.0 167 412-585 49-222 (340)
275 3nsz_A CK II alpha, casein kin 99.9 2.4E-26 8.1E-31 232.3 15.8 159 414-585 36-199 (330)
276 3byv_A Rhoptry kinase; malaria 99.9 1.9E-27 6.4E-32 245.0 7.5 163 413-585 72-271 (377)
277 3ll6_A Cyclin G-associated kin 99.9 1.9E-26 6.6E-31 233.5 14.9 168 414-585 28-219 (337)
278 3lm5_A Serine/threonine-protei 99.9 1.4E-26 4.6E-31 233.8 13.3 171 409-585 23-202 (327)
279 2o6q_A Variable lymphocyte rec 99.9 1.8E-25 6.2E-30 219.0 20.7 203 10-240 16-218 (270)
280 2v62_A Serine/threonine-protei 99.9 6.8E-27 2.3E-31 237.8 10.9 167 414-585 37-229 (345)
281 2h8h_A Proto-oncogene tyrosine 99.9 4.7E-27 1.6E-31 252.6 10.1 169 411-585 264-433 (535)
282 2fst_X Mitogen-activated prote 99.9 5.8E-27 2E-31 239.9 10.2 163 412-585 27-198 (367)
283 2ozo_A Tyrosine-protein kinase 99.9 1.1E-26 3.6E-31 253.5 12.8 167 415-585 336-508 (613)
284 2i6l_A Mitogen-activated prote 99.9 2.4E-26 8.2E-31 231.0 14.5 167 413-585 10-193 (320)
285 3rfs_A Internalin B, repeat mo 99.9 2.3E-26 7.8E-31 225.7 13.4 226 13-276 22-247 (272)
286 3cek_A Dual specificity protei 99.9 6.9E-27 2.4E-31 234.4 9.7 176 404-585 18-197 (313)
287 1xbb_A Tyrosine-protein kinase 99.9 2.5E-26 8.4E-31 227.9 13.5 168 413-585 15-189 (291)
288 1b6c_B TGF-B superfamily recep 99.9 6.7E-26 2.3E-30 230.2 17.0 170 410-585 38-220 (342)
289 4hgt_A Casein kinase I isoform 99.9 4E-26 1.4E-30 226.8 15.0 168 412-585 7-184 (296)
290 2b9h_A MAP kinase FUS3, mitoge 99.9 4.4E-26 1.5E-30 232.6 15.0 167 413-585 10-191 (353)
291 1u46_A ACK-1, activated CDC42 99.9 1.5E-26 5E-31 229.4 11.1 168 414-585 18-193 (291)
292 2jii_A Serine/threonine-protei 99.9 9.2E-27 3.1E-31 237.6 9.6 163 414-585 42-237 (352)
293 3q60_A ROP5B; pseudokinase, tr 99.9 1.3E-26 4.4E-31 238.2 10.6 164 413-585 61-260 (371)
294 3kvw_A DYRK2, dual specificity 99.9 5.8E-26 2E-30 237.5 15.6 163 413-585 96-268 (429)
295 1p9a_G Platelet glycoprotein I 99.9 1.9E-25 6.5E-30 220.9 18.5 201 112-339 12-212 (290)
296 1j1b_A Glycogen synthase kinas 99.9 2.7E-26 9.3E-31 239.5 13.0 161 414-585 54-225 (420)
297 2wei_A Calmodulin-domain prote 99.9 3.6E-26 1.2E-30 226.2 13.1 167 412-585 20-192 (287)
298 3uzp_A CKI-delta, CKID, casein 99.9 6.9E-26 2.4E-30 225.1 15.1 167 413-585 8-184 (296)
299 3sv0_A Casein kinase I-like; t 99.9 7.3E-26 2.5E-30 239.1 15.9 167 413-585 6-182 (483)
300 4e7w_A Glycogen synthase kinas 99.9 2.7E-26 9.3E-31 237.5 12.4 161 414-585 40-210 (394)
301 1byg_A CSK, protein (C-termina 99.9 1.4E-26 4.8E-31 228.1 9.4 162 413-585 20-183 (278)
302 4exu_A Mitogen-activated prote 99.9 3.7E-26 1.2E-30 234.8 12.8 161 413-585 41-210 (371)
303 3rfs_A Internalin B, repeat mo 99.9 7.5E-26 2.5E-30 222.0 14.1 228 35-300 20-247 (272)
304 4fl3_A Tyrosine-protein kinase 99.9 4.2E-26 1.4E-30 249.5 13.7 161 420-585 375-541 (635)
305 1wak_A Serine/threonine-protei 99.9 4.6E-26 1.6E-30 236.3 13.3 163 413-585 36-262 (397)
306 2pzi_A Probable serine/threoni 99.9 2.8E-26 9.7E-31 254.1 12.3 159 414-585 80-246 (681)
307 1blx_A Cyclin-dependent kinase 99.9 8.3E-26 2.8E-30 227.9 14.4 168 411-585 8-188 (326)
308 2j0j_A Focal adhesion kinase 1 99.9 5E-26 1.7E-30 249.8 13.3 170 411-585 387-561 (656)
309 3a99_A Proto-oncogene serine/t 99.9 5.3E-26 1.8E-30 228.7 11.8 167 411-585 40-217 (320)
310 2iwi_A Serine/threonine-protei 99.9 2.9E-26 9.8E-31 229.8 9.7 168 410-585 27-207 (312)
311 3rgf_A Cyclin-dependent kinase 99.9 4.3E-26 1.5E-30 237.1 11.3 165 415-585 21-204 (405)
312 3e3p_A Protein kinase, putativ 99.9 1.5E-25 5.2E-30 229.3 14.8 173 407-585 16-200 (360)
313 1z57_A Dual specificity protei 99.9 1.6E-25 5.5E-30 226.9 14.8 163 413-585 13-203 (339)
314 3coi_A Mitogen-activated prote 99.9 7.7E-26 2.6E-30 230.8 12.1 161 413-585 23-192 (353)
315 3aln_A Dual specificity mitoge 99.9 1.5E-25 5E-30 226.2 13.8 166 413-585 21-194 (327)
316 3fhr_A MAP kinase-activated pr 99.9 2.6E-25 8.8E-30 225.2 14.8 162 413-585 27-198 (336)
317 2vx3_A Dual specificity tyrosi 99.9 4.2E-25 1.4E-29 227.9 16.1 168 410-585 50-227 (382)
318 3p23_A Serine/threonine-protei 99.9 8E-26 2.7E-30 236.3 10.5 165 414-585 24-195 (432)
319 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.5E-26 5.1E-31 232.6 4.3 173 407-585 26-203 (319)
320 2dyl_A Dual specificity mitoge 99.9 2.3E-25 8E-30 223.7 12.8 166 413-585 24-193 (318)
321 2xwt_C Thyrotropin receptor; s 99.9 3.9E-25 1.3E-29 212.6 13.9 196 35-237 32-236 (239)
322 2eu9_A Dual specificity protei 99.9 6.2E-25 2.1E-29 224.1 14.5 163 413-585 18-208 (355)
323 3qa8_A MGC80376 protein; kinas 99.9 1.1E-25 3.8E-30 242.9 9.2 168 412-585 12-192 (676)
324 2rio_A Serine/threonine-protei 99.9 3.8E-25 1.3E-29 231.8 12.6 164 415-585 16-201 (434)
325 3uqc_A Probable conserved tran 99.9 9.5E-25 3.2E-29 215.6 13.6 143 414-562 31-177 (286)
326 1q8y_A SR protein kinase; tran 99.9 4.3E-25 1.5E-29 227.1 11.2 163 413-585 18-204 (373)
327 2xwt_C Thyrotropin receptor; s 99.9 2.1E-24 7.3E-29 207.4 15.0 196 85-309 32-236 (239)
328 4ay9_X Follicle-stimulating ho 99.9 2.3E-24 7.9E-29 219.4 15.7 242 37-310 12-257 (350)
329 3goz_A Leucine-rich repeat-con 99.9 8.6E-26 2.9E-30 231.2 5.2 264 14-295 2-304 (362)
330 4glp_A Monocyte differentiatio 99.9 4.3E-24 1.5E-28 213.7 17.1 225 83-313 63-308 (310)
331 4ay9_X Follicle-stimulating ho 99.9 4.1E-24 1.4E-28 217.6 16.3 200 10-213 30-233 (350)
332 3en9_A Glycoprotease, O-sialog 99.9 4.4E-25 1.5E-29 236.6 8.8 154 417-585 339-505 (540)
333 3m2w_A MAP kinase-activated pr 99.9 4.3E-24 1.5E-28 212.6 15.4 145 413-565 16-171 (299)
334 2ast_B S-phase kinase-associat 99.9 1.8E-25 6.3E-30 226.4 4.6 254 11-296 48-314 (336)
335 3m19_A Variable lymphocyte rec 99.9 2E-23 6.8E-28 202.2 18.2 160 134-314 35-194 (251)
336 2ca6_A RAN GTPase-activating p 99.9 5.4E-26 1.8E-30 234.9 -0.3 244 25-291 23-319 (386)
337 2ca6_A RAN GTPase-activating p 99.9 4.5E-26 1.5E-30 235.5 -1.0 240 57-315 30-319 (386)
338 4glp_A Monocyte differentiatio 99.9 2.4E-24 8.3E-29 215.5 9.9 227 10-241 64-308 (310)
339 1h6u_A Internalin H; cell adhe 99.9 1.3E-23 4.5E-28 209.8 15.1 194 30-241 37-231 (308)
340 3goz_A Leucine-rich repeat-con 99.9 2.6E-25 9E-30 227.6 2.6 258 38-314 2-299 (362)
341 3m19_A Variable lymphocyte rec 99.9 5.6E-23 1.9E-27 199.0 18.7 181 10-197 14-194 (251)
342 1h6u_A Internalin H; cell adhe 99.9 5.5E-23 1.9E-27 205.2 17.9 214 59-314 19-232 (308)
343 2ast_B S-phase kinase-associat 99.9 9.1E-25 3.1E-29 221.2 4.6 248 36-318 49-312 (336)
344 3ogk_B Coronatine-insensitive 99.9 3.1E-25 1.1E-29 242.5 -1.1 302 7-313 161-527 (592)
345 3dzo_A Rhoptry kinase domain; 99.9 1.6E-23 5.4E-28 218.0 9.0 163 413-585 77-276 (413)
346 1zar_A RIO2 kinase; serine kin 99.9 7.3E-23 2.5E-27 201.1 13.2 142 407-564 83-242 (282)
347 3ogk_B Coronatine-insensitive 99.9 1.6E-23 5.6E-28 228.8 1.9 302 5-309 187-548 (592)
348 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4E-26 184.0 13.6 181 37-276 10-190 (208)
349 2xot_A Amphoterin-induced prot 99.9 1.6E-21 5.3E-26 199.3 14.0 162 135-317 40-207 (361)
350 2o6s_A Variable lymphocyte rec 99.9 2.5E-21 8.6E-26 181.7 14.2 181 12-206 9-189 (208)
351 1h6t_A Internalin B; cell adhe 99.9 2.3E-21 8E-26 191.7 14.7 173 6-196 42-214 (291)
352 2v9t_B SLIT homolog 2 protein 99.9 7.8E-22 2.7E-26 186.7 10.0 158 137-318 14-171 (220)
353 1m9s_A Internalin B; cell inva 99.9 6E-21 2.1E-25 206.8 16.8 188 6-211 39-226 (605)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-21 4E-26 185.5 9.6 158 137-318 14-172 (220)
355 2p1m_B Transport inhibitor res 99.8 9.7E-24 3.3E-28 230.7 -6.3 320 7-334 102-493 (594)
356 2p1m_B Transport inhibitor res 99.8 5.6E-23 1.9E-27 224.7 -0.8 85 8-94 128-221 (594)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-20 6.4E-25 177.2 14.7 153 38-196 15-167 (220)
358 2xot_A Amphoterin-induced prot 99.8 1.5E-20 5.2E-25 192.0 15.1 173 37-216 21-199 (361)
359 3cvr_A Invasion plasmid antige 99.8 1.1E-20 3.9E-25 202.4 14.7 196 35-276 60-255 (571)
360 3cvr_A Invasion plasmid antige 99.8 1.6E-20 5.4E-25 201.2 14.7 189 60-300 60-255 (571)
361 1h6t_A Internalin B; cell adhe 99.8 1.9E-20 6.6E-25 185.1 13.4 189 86-313 26-214 (291)
362 1m9s_A Internalin B; cell inva 99.8 2.4E-20 8.2E-25 202.0 14.9 187 11-217 22-208 (605)
363 2v9t_B SLIT homolog 2 protein 99.8 4.9E-20 1.7E-24 174.3 15.3 152 37-195 14-165 (220)
364 1xeu_A Internalin C; cellular 99.8 4.6E-21 1.6E-25 186.6 6.6 172 8-198 17-188 (263)
365 3e6j_A Variable lymphocyte rec 99.8 1.9E-19 6.4E-24 171.5 14.3 156 136-316 21-176 (229)
366 1zth_A RIO1 serine protein kin 99.8 1.6E-20 5.6E-25 182.2 7.0 138 416-565 49-220 (258)
367 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 166.3 16.5 154 36-197 21-174 (229)
368 4ezg_A Putative uncharacterize 99.8 3.1E-19 1.1E-23 165.8 11.7 151 31-217 41-192 (197)
369 3sb4_A Hypothetical leucine ri 99.8 2.7E-20 9.1E-25 187.7 4.5 86 226-313 225-311 (329)
370 1xeu_A Internalin C; cellular 99.8 1.8E-19 6.2E-24 175.3 9.3 168 112-315 21-188 (263)
371 1w8a_A SLIT protein; signaling 99.8 1.8E-19 6.2E-24 166.6 8.5 175 137-339 11-187 (192)
372 4ezg_A Putative uncharacterize 99.8 4.2E-19 1.4E-23 164.9 10.7 156 5-196 39-195 (197)
373 4b8c_D Glucose-repressible alc 99.8 5.7E-20 1.9E-24 204.1 4.5 222 58-312 172-404 (727)
374 4fdw_A Leucine rich hypothetic 99.8 2.9E-17 9.9E-22 169.2 22.2 272 8-312 111-383 (401)
375 1dce_A Protein (RAB geranylger 99.8 2.2E-21 7.6E-26 208.9 -9.7 209 57-306 347-567 (567)
376 1dce_A Protein (RAB geranylger 99.8 2.1E-21 7.1E-26 209.1 -10.3 185 112-318 351-552 (567)
377 3sb4_A Hypothetical leucine ri 99.8 1.3E-18 4.3E-23 175.4 10.2 283 9-306 24-328 (329)
378 1w8a_A SLIT protein; signaling 99.7 5.6E-18 1.9E-22 156.5 12.7 113 85-198 30-142 (192)
379 4fdw_A Leucine rich hypothetic 99.7 5.4E-17 1.8E-21 167.2 21.1 242 58-314 112-360 (401)
380 2wfh_A SLIT homolog 2 protein 99.7 1.7E-18 5.9E-23 160.0 7.8 155 161-340 13-167 (193)
381 4gyi_A RIO2 kinase; protein ki 99.7 2.1E-18 7.3E-23 173.6 5.5 137 414-564 95-265 (397)
382 4b8c_D Glucose-repressible alc 99.7 2.4E-18 8.2E-23 191.0 5.3 215 10-240 173-404 (727)
383 2ell_A Acidic leucine-rich nuc 99.7 4.6E-17 1.6E-21 147.0 9.2 37 58-97 48-84 (168)
384 2wfh_A SLIT homolog 2 protein 99.7 2.7E-16 9.1E-21 145.2 13.0 128 37-196 13-140 (193)
385 2ell_A Acidic leucine-rich nuc 99.7 2.7E-16 9.2E-21 141.9 12.4 129 58-216 23-157 (168)
386 2o6r_A Variable lymphocyte rec 99.7 4.6E-16 1.6E-20 141.7 13.1 133 36-199 9-141 (177)
387 4fs7_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 153.9 19.7 290 5-309 66-376 (394)
388 2je0_A Acidic leucine-rich nuc 99.7 1.2E-16 4.1E-21 141.1 7.3 84 131-214 61-148 (149)
389 2o6r_A Variable lymphocyte rec 99.7 9.1E-16 3.1E-20 139.7 13.4 133 11-174 8-140 (177)
390 2je0_A Acidic leucine-rich nuc 99.6 2E-16 7E-21 139.6 7.9 129 57-191 15-149 (149)
391 1a9n_A U2A', U2A'; complex (nu 99.6 1.2E-15 4.1E-20 138.7 9.5 128 57-216 17-150 (176)
392 1a9n_A U2A', U2A'; complex (nu 99.6 8.8E-16 3E-20 139.6 8.1 114 27-147 12-126 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5.2E-22 154.5 -5.7 155 6-195 14-185 (198)
394 3g39_A Variable lymphocyte rec 99.5 1.5E-14 5E-19 130.6 10.2 91 227-317 30-120 (170)
395 1ds9_A Outer arm dynein; leuci 99.5 3.1E-17 1.1E-21 152.4 -8.7 132 153-312 43-185 (198)
396 4fs7_A Uncharacterized protein 99.5 1.9E-13 6.5E-18 141.0 18.5 283 4-304 88-393 (394)
397 4gt6_A Cell surface protein; l 99.5 8.1E-13 2.8E-17 136.3 21.3 294 5-312 58-370 (394)
398 2r9u_A Variable lymphocyte rec 99.5 4.1E-14 1.4E-18 128.1 10.2 91 227-317 33-123 (174)
399 3g39_A Variable lymphocyte rec 99.5 1.2E-13 3.9E-18 124.7 11.3 86 112-197 32-117 (170)
400 4gt6_A Cell surface protein; l 99.5 2.4E-12 8.1E-17 132.8 21.9 299 21-334 50-369 (394)
401 2r9u_A Variable lymphocyte rec 99.5 2.6E-13 9E-18 122.8 11.3 85 112-196 35-119 (174)
402 3un9_A NLR family member X1; l 99.5 1E-15 3.5E-20 156.1 -5.5 166 34-200 72-257 (372)
403 3un9_A NLR family member X1; l 99.4 5.7E-15 2E-19 150.6 -2.8 139 133-288 125-283 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.4 6.5E-13 2.2E-17 128.9 11.6 148 409-563 9-213 (263)
405 2ifg_A High affinity nerve gro 99.4 3.6E-13 1.2E-17 136.5 7.7 120 219-340 24-146 (347)
406 2ifg_A High affinity nerve gro 99.3 5E-12 1.7E-16 128.0 10.9 90 227-317 56-146 (347)
407 4h09_A Hypothetical leucine ri 99.3 2.9E-10 9.8E-15 116.5 22.8 288 6-309 42-343 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.3 8E-12 2.7E-16 120.9 9.6 140 413-564 19-215 (264)
409 4h09_A Hypothetical leucine ri 99.1 3E-09 1E-13 108.9 20.4 288 28-331 40-342 (379)
410 3dxp_A Putative acyl-COA dehyd 99.1 2.9E-10 1E-14 115.5 10.7 143 417-563 41-248 (359)
411 2ra8_A Uncharacterized protein 99.1 2.7E-11 9.3E-16 122.3 2.1 182 27-217 132-341 (362)
412 2ra8_A Uncharacterized protein 99.0 1.1E-10 3.7E-15 117.9 4.6 153 152-310 166-341 (362)
413 3r70_A Aminoglycoside phosphot 98.7 4.4E-08 1.5E-12 97.6 11.9 137 415-564 38-238 (320)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 5.4E-08 1.8E-12 96.2 9.2 136 419-563 25-223 (304)
415 3tdw_A Gentamicin resistance p 98.6 4.2E-07 1.4E-11 89.8 13.6 136 419-563 24-224 (306)
416 1io0_A Tropomodulin; LRR prote 98.6 1.1E-08 3.8E-13 93.1 1.8 64 132-195 91-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.9E-08 6.6E-13 91.5 1.7 97 79-197 31-138 (185)
418 4gkh_A Aminoglycoside 3'-phosp 98.5 1.1E-06 3.7E-11 85.1 14.0 142 413-563 24-223 (272)
419 3rw6_A Nuclear RNA export fact 98.5 1.2E-08 4.1E-13 97.7 -0.1 80 131-212 167-257 (267)
420 3d1u_A Putative fructosamine-3 98.5 5.3E-07 1.8E-11 88.0 11.4 77 417-497 18-97 (288)
421 3rw6_A Nuclear RNA export fact 98.5 3.4E-08 1.2E-12 94.5 2.6 80 224-305 167-257 (267)
422 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.3E-06 4.5E-11 88.3 11.8 77 416-498 43-122 (362)
423 3ats_A Putative uncharacterize 98.3 6.4E-07 2.2E-11 90.6 7.5 80 419-498 25-121 (357)
424 3e4g_A ATP synthase subunit S, 98.1 4E-07 1.4E-11 80.8 0.7 92 2-95 53-150 (176)
425 2olc_A MTR kinase, methylthior 98.1 8.8E-06 3E-10 83.5 10.5 75 419-495 35-120 (397)
426 3e4g_A ATP synthase subunit S, 98.1 1.9E-06 6.5E-11 76.5 3.9 82 112-193 63-150 (176)
427 2q83_A YTAA protein; 2635576, 98.0 2.5E-05 8.5E-10 78.2 11.6 139 420-563 38-252 (346)
428 3jr1_A Putative fructosamine-3 97.9 0.0001 3.5E-09 72.4 13.0 76 418-497 40-118 (312)
429 3rfe_A Platelet glycoprotein I 97.7 3.7E-05 1.3E-09 64.9 6.1 63 254-318 11-74 (130)
430 3f7w_A Putative fructosamine-3 97.7 0.00021 7.3E-09 69.5 11.4 78 416-497 17-97 (288)
431 2pyw_A Uncharacterized protein 97.7 0.00014 4.9E-09 74.9 10.2 74 418-494 38-122 (420)
432 2ppq_A HSK, HK, homoserine kin 97.6 0.00017 5.8E-09 71.4 10.1 158 403-563 6-217 (322)
433 1pgv_A TMD-1, tropomodulin TMD 97.5 2.7E-05 9.1E-10 70.4 1.9 66 130-195 94-170 (197)
434 3csv_A Aminoglycoside phosphot 97.5 0.00046 1.6E-08 68.6 10.7 139 420-563 24-217 (333)
435 3dxq_A Choline/ethanolamine ki 97.5 0.00033 1.1E-08 68.6 9.1 74 416-497 20-95 (301)
436 3rfe_A Platelet glycoprotein I 97.4 0.00025 8.7E-09 59.7 6.7 56 37-97 11-68 (130)
437 1pgv_A TMD-1, tropomodulin TMD 97.4 3.8E-05 1.3E-09 69.4 1.6 91 80-192 37-136 (197)
438 1zyl_A Hypothetical protein YI 97.4 0.00073 2.5E-08 66.9 11.0 140 420-563 32-223 (328)
439 1nw1_A Choline kinase (49.2 KD 97.2 0.00054 1.8E-08 70.7 8.2 73 419-497 78-159 (429)
440 3feg_A Choline/ethanolamine ki 97.2 0.00067 2.3E-08 68.5 8.7 140 419-563 55-254 (379)
441 2qg7_A Ethanolamine kinase PV0 97.2 0.0016 5.5E-08 67.5 10.9 74 419-497 113-188 (458)
442 3c5i_A Choline kinase; choline 97.0 0.0011 3.7E-08 67.0 7.7 74 419-497 38-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.8 0.0066 2.3E-07 60.3 11.2 32 532-563 205-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.6 0.0066 2.3E-07 61.5 9.7 140 420-563 58-280 (401)
445 3mes_A Choline kinase; malaria 96.0 0.013 4.4E-07 59.9 8.1 74 419-497 75-157 (424)
446 3g15_A CK, chetk-alpha, cholin 93.6 0.3 1E-05 49.5 10.4 30 534-563 245-280 (401)
447 4ano_A ESSB; membrane protein, 84.3 3.6 0.00012 37.2 8.3 87 468-565 48-135 (219)
448 2ks1_B Epidermal growth factor 81.4 0.72 2.5E-05 29.8 1.8 22 363-384 17-39 (44)
449 4ann_A ESSB; membrane protein, 80.7 3.4 0.00012 37.3 6.7 87 468-565 43-130 (215)
450 3cxl_A N-chimerin; SH2, RHO-GA 77.3 0.21 7.3E-06 51.6 -2.6 60 417-479 145-213 (463)
451 2lz0_A Uncharacterized protein 74.2 4.9 0.00017 31.3 5.2 48 120-168 6-53 (100)
452 2lz0_A Uncharacterized protein 70.7 10 0.00034 29.5 6.2 47 238-285 7-53 (100)
453 2l2t_A Receptor tyrosine-prote 69.8 1.3 4.4E-05 28.6 0.7 9 376-384 30-38 (44)
454 2jwa_A Receptor tyrosine-prote 61.4 1.8 6.3E-05 27.8 0.2 10 360-369 14-23 (44)
455 2l2t_A Receptor tyrosine-prote 58.4 2 6.8E-05 27.7 -0.1 15 375-389 26-40 (44)
456 2k1k_A Ephrin type-A receptor 48.1 4.7 0.00016 25.1 0.4 16 357-372 10-25 (38)
457 1cja_A Protein (actin-fragmin 43.3 44 0.0015 32.2 6.5 76 484-563 156-237 (342)
458 3ls8_A Phosphatidylinositol 3- 40.4 3.5E+02 0.012 28.4 14.5 46 510-562 454-501 (614)
459 2yle_A Protein spire homolog 1 35.9 46 0.0016 30.0 5.1 61 495-557 33-93 (229)
460 2x6h_A GH13170P, VPS34, phosph 24.1 39 0.0013 36.2 3.0 44 512-562 530-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.6e-45 Score=411.51 Aligned_cols=342 Identities=38% Similarity=0.571 Sum_probs=288.9
Q ss_pred CCccccCCCCCCEEecCCCcccccCCcc-ccCCCCCCEEecCCCcCCCcCCcc--------------------------c
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVA-IFNVSTLKLLGLQDNSLSGSLSSI--------------------------T 54 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~--------------------------~ 54 (585)
+|..|+.+++|++|+|++|++++.+|.. +.++++|++|+|++|.+++.++.. .
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~ 389 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTT
T ss_pred cchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhh
Confidence 4566666666666666666666555544 666666666666666655333321 1
Q ss_pred cCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCC
Q 047705 55 DVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLT 134 (585)
Q Consensus 55 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 134 (585)
...+++|++|+|++|+++.... ..+..+++|++|+|++|++++..|. .++.++. |+.|++++|.+++.+|..+..++
T Consensus 390 ~~~~~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~ 466 (768)
T 3rgz_A 390 QNPKNTLQELYLQNNGFTGKIP-PTLSNCSELVSLHLSFNYLSGTIPS-SLGSLSK-LRDLKLWLNMLEGEIPQELMYVK 466 (768)
T ss_dssp CSTTCCCCEEECCSSEEEEECC-GGGGGCTTCCEEECCSSEEESCCCG-GGGGCTT-CCEEECCSSCCCSCCCGGGGGCT
T ss_pred hcccCCccEEECCCCccccccC-HHHhcCCCCCEEECcCCcccCcccH-HHhcCCC-CCEEECCCCcccCcCCHHHcCCC
Confidence 1125678888888888774432 6788899999999999999888887 6777776 99999999999999999999999
Q ss_pred CccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCC
Q 047705 135 NLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLG 214 (585)
Q Consensus 135 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 214 (585)
+|++|+|++|++.+..|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..+..+++|+.|+++
T Consensus 467 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 546 (768)
T 3rgz_A 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECC
T ss_pred CceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC---CCCc----------------------------------------------------------------------
Q 047705 215 SND---PLPL---------------------------------------------------------------------- 221 (585)
Q Consensus 215 ~n~---~~~~---------------------------------------------------------------------- 221 (585)
+|. .+|.
T Consensus 547 ~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~ 626 (768)
T 3rgz_A 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626 (768)
T ss_dssp SSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCC
T ss_pred CCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCch
Confidence 985 3332
Q ss_pred cCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCcc
Q 047705 222 EIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYL 301 (585)
Q Consensus 222 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 301 (585)
.+..++.|+.||+++|+++|.+|..|+++++|+.|+|++|+++|.+|..++.+++|++|||++|++++.+|..+..+++|
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L 706 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCC
Confidence 23446789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCCCCCCCCCCCC
Q 047705 302 EDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNLQVPPCKTS 349 (585)
Q Consensus 302 ~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~~ 349 (585)
++||+++|+++|.+|....+..+....+.||+..|+.| .+.|...
T Consensus 707 ~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~ 751 (768)
T 3rgz_A 707 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPS 751 (768)
T ss_dssp SEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSC
T ss_pred CEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCC
Confidence 99999999999999999889999999999999999987 3378654
No 2
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-42 Score=364.93 Aligned_cols=333 Identities=22% Similarity=0.207 Sum_probs=300.4
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
||..+. +++++|+|++|++++..+..|.++++|++|+|++|.|++..+ ..+..+++|++|+|++|+++.++. ..|.
T Consensus 26 ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~~~ 101 (477)
T 2id5_A 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPL-GVFT 101 (477)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCT-TSST
T ss_pred CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCc-cccc
Confidence 666553 689999999999999989999999999999999999985544 445689999999999999999986 7899
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCc
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQ 161 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 161 (585)
.+++|++|+|++|++.++.+. .+..+++ |++|++++|.+++..+..|..+++|++|+|++|+++++.+..|.++++|+
T Consensus 102 ~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 179 (477)
T 2id5_A 102 GLSNLTKLDISENKIVILLDY-MFQDLYN-LKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLI 179 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTT-TTTTCTT-CCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCC
T ss_pred CCCCCCEEECCCCccccCChh-Hcccccc-CCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCc
Confidence 999999999999999988776 6777876 99999999999999999999999999999999999998888999999999
Q ss_pred eEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCC-ccCCCCCCCcEEEccCCc
Q 047705 162 GLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLP-LEIGNLKVLVGIDFSMNN 238 (585)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~-~~~~~l~~L~~L~ls~N~ 238 (585)
.|+|++|.+++..+..|..+++|++|++++|.+.+.++..+....+|+.|++++|. .+| ..+..+++|+.|++++|.
T Consensus 180 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 259 (477)
T 2id5_A 180 VLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259 (477)
T ss_dssp EEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCc
Confidence 99999999999888899999999999999999887777777777799999999998 344 357899999999999999
Q ss_pred ccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 239 FSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 239 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
+++..+..|.++++|+.|+|++|+++++.|..|..+++|+.|++++|+|++..+..|..+++|+.|++++|+|.|+|+..
T Consensus 260 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~ 339 (477)
T 2id5_A 260 ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLL 339 (477)
T ss_dssp CCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGH
T ss_pred CCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchH
Confidence 99999999999999999999999999999999999999999999999999888888899999999999999999999865
Q ss_pred CCCCCCCccccCCCCcccCCCC
Q 047705 319 GSFGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 319 ~~~~~~~~~~~~~n~~~c~~~~ 340 (585)
+.........+.++...|..|.
T Consensus 340 ~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 340 WVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp HHHTTTTSSCCTTCCCBEEESG
T ss_pred hHHhhhhccccCccCceeCCch
Confidence 5544555566788888998764
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-41 Score=380.41 Aligned_cols=335 Identities=34% Similarity=0.514 Sum_probs=249.8
Q ss_pred CCCccccCC-CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCC-CCccCc
Q 047705 1 EIPLEIGNL-QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFS-ELNFLS 78 (585)
Q Consensus 1 ~~p~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~ 78 (585)
.+|..+..+ ++|++|+|++|++++..|..|+++++|++|+|++|.+++.++...+..+++|++|+|++|+++ .+| .
T Consensus 284 ~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p--~ 361 (768)
T 3rgz_A 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP--E 361 (768)
T ss_dssp SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCC--T
T ss_pred ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCcccc--H
Confidence 378888776 999999999999999999999999999999999999987888765668999999999999987 444 3
Q ss_pred cccCC---------------------------CCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCcccc
Q 047705 79 SLSNC---------------------------KSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIG 131 (585)
Q Consensus 79 ~~~~l---------------------------~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 131 (585)
.+..+ ++|++|+|++|++++..|. .+++++. |++|++++|.+++.+|..|.
T Consensus 362 ~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~-~l~~l~~-L~~L~Ls~N~l~~~~p~~l~ 439 (768)
T 3rgz_A 362 SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP-TLSNCSE-LVSLHLSFNYLSGTIPSSLG 439 (768)
T ss_dssp THHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG-GGGGCTT-CCEEECCSSEEESCCCGGGG
T ss_pred HHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH-HHhcCCC-CCEEECcCCcccCcccHHHh
Confidence 34333 4455555555555555554 4555554 77777777777777777777
Q ss_pred CCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhh
Q 047705 132 NLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRIL 211 (585)
Q Consensus 132 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (585)
.+++|++|++++|.+.+..|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.++..+++|++|
T Consensus 440 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 519 (768)
T 3rgz_A 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEE
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCCCC---CCCccCCCCCCCcEEEccCCcccccCCcc------------------------------------------
Q 047705 212 SLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPKE------------------------------------------ 246 (585)
Q Consensus 212 ~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~------------------------------------------ 246 (585)
++++|. ..|..+..+++|+.|++++|++++.+|..
T Consensus 520 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (768)
T 3rgz_A 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599 (768)
T ss_dssp ECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTC
T ss_pred ECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccc
Confidence 777776 56666777777777777777776555543
Q ss_pred ----------------------------cCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccC
Q 047705 247 ----------------------------IGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKL 298 (585)
Q Consensus 247 ----------------------------~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 298 (585)
|..+++|+.|+|++|+++|.+|..++.++.|+.|+|++|++++.+|..+..+
T Consensus 600 ~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L 679 (768)
T 3rgz_A 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679 (768)
T ss_dssp CGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred cchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCC
Confidence 2334567778888888887888888888888888888888888888888888
Q ss_pred CccceEEeecCcCeeeCCCC-CCCCCCCccccCCCCcccCCC
Q 047705 299 SYLEDLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 299 ~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 339 (585)
++|+.|||++|++++.+|.. ..+..++.+++.+|+.....|
T Consensus 680 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 88888888888888777753 345667777777777654433
No 4
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.1e-41 Score=355.75 Aligned_cols=328 Identities=21% Similarity=0.221 Sum_probs=270.2
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
++|++|+|++|++++..|..|+++++|++|+|++|.+.+.++...+..+++|++|+|++|+++.++. ..|..+++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLET-GAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECT-TTTTTCTTCCEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccCh-hhccCcccCCEE
Confidence 7899999999999988899999999999999999999877766667789999999999999998864 789999999999
Q ss_pred EccCCCCcccCCc-chhhcccccccEEEeecCcceecCCcc-ccCCCCccEEEeeCCccccccchhhhCC--CCCceEEc
Q 047705 90 GLSNNPLDGILPK-TSIGNLSHSLEDFQMHNCNVTGDIPEE-IGNLTNLITIDLGGNKLNGSILITLSKL--QKLQGLVL 165 (585)
Q Consensus 90 ~Ls~N~l~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L 165 (585)
+|++|++++..+. ..++.++. |++|+|++|++++..|.. |..+++|++|++++|++.+..+..+..+ .+|+.|++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l 187 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTS-LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRL 187 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTT-CCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEEC
T ss_pred eCCCCCCCccccCcccccCccc-CCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccc
Confidence 9999999864332 24667776 999999999999888876 8999999999999999999888888766 57777788
Q ss_pred cCCCCCccCccc--------ccCCCCCcEEEcCCCcccccCcccccC---------------------------------
Q 047705 166 DDNKLEGSIPDD--------ICRLVELYKLELGGNKLSRSIPACFNN--------------------------------- 204 (585)
Q Consensus 166 ~~N~l~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~--------------------------------- 204 (585)
++|.+++..+.. +..+++|++|++++|.+++..|..+..
T Consensus 188 ~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 267 (455)
T 3v47_A 188 SSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNF 267 (455)
T ss_dssp TTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTT
T ss_pred ccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccc
Confidence 887777555433 234567777777777776555443322
Q ss_pred ------cccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcC
Q 047705 205 ------LIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLI 275 (585)
Q Consensus 205 ------l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 275 (585)
.++|+.|++++|. ..|..+..+++|+.|++++|.+++..|..|.++++|++|+|++|++++..|..|..++
T Consensus 268 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred ccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 2567788888876 4566788888899999999988888888888888899999999988888788888888
Q ss_pred CCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC-CCCCCCCccccCCCCcccCCC
Q 047705 276 SLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 276 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 339 (585)
+|++|++++|++++..|..+..+++|++|++++|.+++.++.. ..+..++.+++.+|++.|+.|
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8999999999888888888888888999999999888766543 456778888888898888876
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=374.51 Aligned_cols=332 Identities=25% Similarity=0.242 Sum_probs=254.4
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcC-CccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSL-SSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
|.+|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++.+ +...+..+++|++|+|++|.++.++....|.
T Consensus 66 ~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 145 (844)
T 3j0a_A 66 KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145 (844)
T ss_dssp TTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG
T ss_pred HHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh
Confidence 778999999999999999999888999999999999999999998644 3445668999999999999998886435688
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcc-----------------------------------------------------
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNL----------------------------------------------------- 108 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~----------------------------------------------------- 108 (585)
.+++|++|+|++|.+++..+.. ++.+
T Consensus 146 ~L~~L~~L~Ls~N~i~~~~~~~-l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 224 (844)
T 3j0a_A 146 KLNSLKSIDFSSNQIFLVCEHE-LEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNF 224 (844)
T ss_dssp TCSSCCEEEEESSCCCCCCSGG-GHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGG
T ss_pred hCCCCCEEECCCCcCCeeCHHH-cccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHH
Confidence 9999999999999886654431 1110
Q ss_pred ----------------------------------------cccccEEEeecCcceecCCccccCCCCccEEEeeCCcccc
Q 047705 109 ----------------------------------------SHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNG 148 (585)
Q Consensus 109 ----------------------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 148 (585)
+.+|+.|++++|.+++..+..|..+++|++|+|++|.+.+
T Consensus 225 ~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 304 (844)
T 3j0a_A 225 SNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK 304 (844)
T ss_dssp GGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCE
T ss_pred HhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCC
Confidence 1247777777777777777888888888888888888888
Q ss_pred ccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCc-------
Q 047705 149 SILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPL------- 221 (585)
Q Consensus 149 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~------- 221 (585)
..+.+|.++++|++|+|++|++++..|..|..+++|++|++++|.+....+..|..+++|+.|+|++|.....
T Consensus 305 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~ 384 (844)
T 3j0a_A 305 IADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIP 384 (844)
T ss_dssp ECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCS
T ss_pred CChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcc
Confidence 8888888888899999998888888888888888888888888888877777788888888888887752110
Q ss_pred ------------------------------------cCCCCCCCcEEEccCCcccccC----------------------
Q 047705 222 ------------------------------------EIGNLKVLVGIDFSMNNFSGII---------------------- 243 (585)
Q Consensus 222 ------------------------------------~~~~l~~L~~L~ls~N~l~~~~---------------------- 243 (585)
.+..+++|+.|++++|++++..
T Consensus 385 ~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~ 464 (844)
T 3j0a_A 385 DIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQ 464 (844)
T ss_dssp EEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCS
T ss_pred hhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccc
Confidence 0124566666666666665322
Q ss_pred --------CcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeC
Q 047705 244 --------PKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEI 315 (585)
Q Consensus 244 --------~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 315 (585)
+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+. ++|+.||+++|.+++..
T Consensus 465 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 465 LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPN 542 (844)
T ss_dssp SSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCC
T ss_pred cccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCC
Confidence 23456667777777777777777777777777777777777777766655554 67777888888877766
Q ss_pred CCCCCCCCCCccccCCCCcccCCC
Q 047705 316 PRGGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 316 ~~~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
|.. +..+..+++.+||+.|+++
T Consensus 543 ~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 543 PDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCC--CSSCCEEEEEEECCCCSSS
T ss_pred hhH--hCCcCEEEecCCCcccccc
Confidence 643 4578888999999999764
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-39 Score=356.04 Aligned_cols=208 Identities=24% Similarity=0.237 Sum_probs=166.6
Q ss_pred CCCCccEEEeeCCcccccc--chhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCc-ccccCcccc
Q 047705 132 NLTNLITIDLGGNKLNGSI--LITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIP-ACFNNLIAL 208 (585)
Q Consensus 132 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 208 (585)
.+++|++|++++|++.+.. +..+..+++|++|++++|.+++ +|..+..+++|++|++++|.+.+..+ ..|..+++|
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccC
Confidence 3455566666666665542 5667777777777777777774 44677888888888888888887766 578888888
Q ss_pred hhhcCCCCC---CCCccCCCCCCCcEEEccCCcccc-cCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCC
Q 047705 209 RILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSG-IIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSN 284 (585)
Q Consensus 209 ~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~ 284 (585)
++|++++|. ..|..+..+++|+.|++++|.+++ ..|..|..+++|+.|++++|++++..|..|..+++|+.|++++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 888888887 566678888999999999999887 4788889999999999999999988888899999999999999
Q ss_pred CccCccCChhhccCCccceEEeecCcCeeeCCCCCCCC-CCCccccCCCCcccCCCC
Q 047705 285 NNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFG-NFSAESFEGNELLCGSPN 340 (585)
Q Consensus 285 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~~~ 340 (585)
|++++..|..+..+++|++|++++|+++..++....+. .++.+++.+|++.|+++.
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99998888899999999999999999986555544443 478888999999998763
No 7
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.5e-40 Score=346.33 Aligned_cols=315 Identities=22% Similarity=0.215 Sum_probs=264.0
Q ss_pred CCccccCCCCCCEEecCCCcccc-cCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCC-ccCcc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIG-TVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSEL-NFLSS 79 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~ 79 (585)
.|.+|+++++|++|+|++|.+.+ +.+..|.++++|++|+|++|.+++..+. .+..+++|++|+|++|+++.. +....
T Consensus 46 ~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~ 124 (455)
T 3v47_A 46 NETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETG-AFNGLANLEVLTLTQCNLDGAVLSGNF 124 (455)
T ss_dssp CTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTT-TTTTCTTCCEEECTTSCCBTHHHHSST
T ss_pred ChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChh-hccCcccCCEEeCCCCCCCccccCccc
Confidence 37889999999999999999874 4467899999999999999999855443 345799999999999999873 22245
Q ss_pred ccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCC--CCccEEEeeCCccccccchhh---
Q 047705 80 LSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNL--TNLITIDLGGNKLNGSILITL--- 154 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~--- 154 (585)
|..+++|++|+|++|++++..|..++.+++. |++|++++|.+++..+..+..+ .+|+.|++++|.+.+..+..+
T Consensus 125 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~ 203 (455)
T 3v47_A 125 FKPLTSLEMLVLRDNNIKKIQPASFFLNMRR-FHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWE 203 (455)
T ss_dssp TTTCTTCCEEECCSSBCCSCCCCGGGGGCTT-CCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHH
T ss_pred ccCcccCCEEECCCCccCccCcccccCCCCc-ccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccc
Confidence 8999999999999999998888766788876 9999999999999888877765 556666666666665443322
Q ss_pred -----hCCCCCceEEccCCCCCccCcccccC---------------------------------------CCCCcEEEcC
Q 047705 155 -----SKLQKLQGLVLDDNKLEGSIPDDICR---------------------------------------LVELYKLELG 190 (585)
Q Consensus 155 -----~~l~~L~~L~L~~N~l~~~~~~~~~~---------------------------------------l~~L~~L~L~ 190 (585)
..+++|++|++++|++++..|..+.. .++|++|+++
T Consensus 204 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 283 (455)
T 3v47_A 204 KCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLS 283 (455)
T ss_dssp HHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECC
T ss_pred ccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEec
Confidence 24456666666666665444433221 2689999999
Q ss_pred CCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCccccc
Q 047705 191 GNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLI 267 (585)
Q Consensus 191 ~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 267 (585)
+|.+++..|..|..+++|++|++++|. ..+..+..+++|+.|++++|.+++..+..|.++++|+.|+|++|++++..
T Consensus 284 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 284 KSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363 (455)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEEC
T ss_pred CccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccC
Confidence 999999999999999999999999998 45668999999999999999999998999999999999999999999998
Q ss_pred CccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 268 PDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 268 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
|..|..+++|++|++++|++++..+..+..+++|++|++++|+|+|.||..
T Consensus 364 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999999999999999999999887778899999999999999999999964
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.2e-39 Score=351.71 Aligned_cols=279 Identities=24% Similarity=0.275 Sum_probs=191.9
Q ss_pred CCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCC-ccccCCC
Q 047705 56 VRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIP-EEIGNLT 134 (585)
Q Consensus 56 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~ 134 (585)
..+++|++|+|++|+++.+| ..+..+++|++|++++|++.+..|. .++.++. |++|++++|.+.+.++ ..+..++
T Consensus 275 ~~l~~L~~L~l~~n~l~~lp--~~l~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 275 HCFSGLQELDLTATHLSELP--SGLVGLSTLKKLVLSANKFENLCQI-SASNFPS-LTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTCTTCSEEECTTSCCSCCC--SSCCSCTTCCEEECTTCCCSBGGGG-CGGGCTT-CSEEECCSCSSCCBCCSSTTTTCT
T ss_pred ccccCCCEEeccCCccCCCC--hhhcccccCCEEECccCCcCcCchh-hhhccCc-CCEEECCCCCcccccchhhhhccC
Confidence 34566666666666666665 4466666666666666666655443 4555554 7777777776664444 3466777
Q ss_pred CccEEEeeCCcccccc--chhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcc-cccCcccchhh
Q 047705 135 NLITIDLGGNKLNGSI--LITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPA-CFNNLIALRIL 211 (585)
Q Consensus 135 ~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L 211 (585)
+|++|++++|.+.+.. +..|.++++|++|++++|++++..|..|..+++|++|++++|.+.+..+. .|..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 7777777777776655 55677777777777777777766677777777777777777777655443 36777777777
Q ss_pred cCCCCC---CCCccCCCCCCCcEEEccCCccccc---CCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCC
Q 047705 212 SLGSND---PLPLEIGNLKVLVGIDFSMNNFSGI---IPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNN 285 (585)
Q Consensus 212 ~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 285 (585)
++++|. ..|..+..+++|+.|++++|++++. .+..+..+++|+.|++++|++++..|..|..+++|+.|++++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 777775 3445567777777777777777652 2345677777777777777777777777777777777888887
Q ss_pred ccCccCChhhccCCccceEEeecCcCeeeCCCC-CCCCCCCccccCCCCcccCCC
Q 047705 286 NLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 286 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 339 (585)
++++..|..+..+++| +|++++|.+++.+|.. ..+..++.+++.+||+.|+++
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 7777777777777777 7777888777665542 334566777888888888654
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-39 Score=356.12 Aligned_cols=329 Identities=18% Similarity=0.245 Sum_probs=286.3
Q ss_pred CCcccc--CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCc-CCC-cCCcccc-----CCCCCccEEEccCCCCC
Q 047705 2 IPLEIG--NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNS-LSG-SLSSITD-----VRLPNLEELVLWGNNFS 72 (585)
Q Consensus 2 ~p~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~-----~~l~~L~~L~L~~n~l~ 72 (585)
+|.+++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|.... ..+++|++|+|++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 899999 99999999999999999999999999999999999998 886 4543221 12489999999999999
Q ss_pred CCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCC-ccEEEeeCCccccccc
Q 047705 73 ELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTN-LITIDLGGNKLNGSIL 151 (585)
Q Consensus 73 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~ 151 (585)
.+|....+..+++|++|+|++|++++.+| .++.+++ |++|++++|.++ .+|..+..+++ |++|++++|.++ .+|
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip--~~~~l~~-L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp 393 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP--AFGSEIK-LASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIP 393 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC--CCEEEEE-ESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh--hhCCCCC-CCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccc
Confidence 88721289999999999999999997777 5777776 999999999999 77888999999 999999999999 667
Q ss_pred hhhhCCC--CCceEEccCCCCCccCccccc-------CCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCC
Q 047705 152 ITLSKLQ--KLQGLVLDDNKLEGSIPDDIC-------RLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLP 220 (585)
Q Consensus 152 ~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~ 220 (585)
..+..+. +|++|++++|++++..|..+. .+++|++|+|++|.++...+..+..+++|+.|+|++|. .+|
T Consensus 394 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~ 473 (636)
T 4eco_A 394 NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIP 473 (636)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCC
T ss_pred hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcC
Confidence 7777654 999999999999999998888 88899999999999996655667789999999999998 444
Q ss_pred ccCCC--------CCCCcEEEccCCcccccCCcccC--CCCCCcEEeecccCcccccCccccCcCCCCEEeC------CC
Q 047705 221 LEIGN--------LKVLVGIDFSMNNFSGIIPKEIG--GLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNL------SN 284 (585)
Q Consensus 221 ~~~~~--------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l------~~ 284 (585)
..... +++|+.|++++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++ ++
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~ 551 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQG 551 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTC
T ss_pred HHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCccccc
Confidence 43322 239999999999999 5777776 99999999999999998 7899999999999999 56
Q ss_pred CccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCC
Q 047705 285 NNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 285 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
|++.+.+|..+..+++|++|++++|.+ +.+|... ...++.+++.+|++.|-..
T Consensus 552 N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 552 NRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCEEEC
T ss_pred CcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCccccH
Confidence 888999999999999999999999999 5566543 3788999999999988543
No 10
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=346.33 Aligned_cols=324 Identities=21% Similarity=0.196 Sum_probs=229.1
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
||..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|++..+ ..+..+++|++|+|++|+|+.+|. .
T Consensus 46 ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~lp~-~--- 118 (562)
T 3a79_B 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDF-HVFLFNQDLEYLDVSHNRLQNISC-C--- 118 (562)
T ss_dssp CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECT-TTTTTCTTCCEEECTTSCCCEECS-C---
T ss_pred CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCH-HHhCCCCCCCEEECCCCcCCccCc-c---
Confidence 454443 566677777776666555666666667777777776663333 233456666677776666666653 2
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCc--cEEEeeCCcc--ccccchhhhCC
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNL--ITIDLGGNKL--NGSILITLSKL 157 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l 157 (585)
.+++|++|+|++|+++++..+..++++++ |++|++++|.+++.. +..+++| ++|++++|.+ .+..+..|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~-L~~L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 119 PMASLRHLDLSFNDFDVLPVCKEFGNLTK-LTFLGLSAAKFRQLD---LLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp CCTTCSEEECCSSCCSBCCCCGGGGGCTT-CCEEEEECSBCCTTT---TGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred ccccCCEEECCCCCccccCchHhhcccCc-ccEEecCCCccccCc---hhhhhhceeeEEEeecccccccccCccccccc
Confidence 56666666666666665432225555554 666666666665432 3333333 6666666655 43333333332
Q ss_pred C-------------------------------------------------------------------------------
Q 047705 158 Q------------------------------------------------------------------------------- 158 (585)
Q Consensus 158 ~------------------------------------------------------------------------------- 158 (585)
.
T Consensus 195 ~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~ 274 (562)
T 3a79_B 195 NTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW 274 (562)
T ss_dssp CEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHT
T ss_pred CcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhh
Confidence 2
Q ss_pred --CCceEEccCCCCCccCcccc-----------------------------------------------------cCCCC
Q 047705 159 --KLQGLVLDDNKLEGSIPDDI-----------------------------------------------------CRLVE 183 (585)
Q Consensus 159 --~L~~L~L~~N~l~~~~~~~~-----------------------------------------------------~~l~~ 183 (585)
+|++|++++|.+++.+|..+ ..+++
T Consensus 275 ~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~ 354 (562)
T 3a79_B 275 PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSS 354 (562)
T ss_dssp TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCC
Confidence 56666666666665555443 67789
Q ss_pred CcEEEcCCCcccccCcccccCcccchhhcCCCCCCC-----CccCCCCCCCcEEEccCCcccc-cCCcccCCCCCCcEEe
Q 047705 184 LYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPL-----PLEIGNLKVLVGIDFSMNNFSG-IIPKEIGGLKNLEYLF 257 (585)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~-----~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~ 257 (585)
|++|++++|.+++..|..+..+++|+.|++++|... |..+..+++|+.|++++|.+++ ..+..+..+++|++|+
T Consensus 355 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~ 434 (562)
T 3a79_B 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434 (562)
T ss_dssp CCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEE
T ss_pred ceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEE
Confidence 999999999999888899999999999999999722 2458899999999999999998 4445688899999999
Q ss_pred ecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC-CCCCCCCCccccCCCCccc
Q 047705 258 LGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR-GGSFGNFSAESFEGNELLC 336 (585)
Q Consensus 258 ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c 336 (585)
+++|++++..|..+. ++|+.|++++|+|+ .+|..+..+++|++|++++|.++..++. ...+..++.+++.+|++.|
T Consensus 435 l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 435 LSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 999999887776554 68999999999999 5666667999999999999999965554 4567788889999999999
Q ss_pred CCC
Q 047705 337 GSP 339 (585)
Q Consensus 337 ~~~ 339 (585)
+.+
T Consensus 512 ~c~ 514 (562)
T 3a79_B 512 TCP 514 (562)
T ss_dssp CHH
T ss_pred Ccc
Confidence 865
No 11
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=340.27 Aligned_cols=330 Identities=22% Similarity=0.256 Sum_probs=293.0
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|..-.....-+.++.+++.++ .+|..+. ++|++|+|++|+|++.. ...+..+++|++|+|++|+++.++. ..|..
T Consensus 4 p~~C~C~~~~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~ 78 (477)
T 2id5_A 4 PPRCECSAQDRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLN-QDEFASFPHLEELELNENIVSAVEP-GAFNN 78 (477)
T ss_dssp STTCEEETTTTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECT-TTTTT
T ss_pred cCCCeECCCCCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceEC-HhHccCCCCCCEEECCCCccCEeCh-hhhhC
Confidence 444444455678999999997 6677664 58999999999999544 4445689999999999999999865 88999
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCce
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQG 162 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 162 (585)
+++|++|+|++|+++.+.+. .+.++++ |++|+|++|.+++..+..|..+++|++|+|++|.+.++.+..|.++++|++
T Consensus 79 l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 156 (477)
T 2id5_A 79 LFNLRTLGLRSNRLKLIPLG-VFTGLSN-LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 156 (477)
T ss_dssp CTTCCEEECCSSCCCSCCTT-SSTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCE
T ss_pred CccCCEEECCCCcCCccCcc-cccCCCC-CCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCE
Confidence 99999999999999876655 6777776 999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcc
Q 047705 163 LVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNF 239 (585)
Q Consensus 163 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l 239 (585)
|+|++|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|. ..+.......+|+.|++++|.+
T Consensus 157 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 236 (477)
T 2id5_A 157 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236 (477)
T ss_dssp EEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCC
T ss_pred EECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcc
Confidence 9999999998888889999999999999999998888899999999999999986 4555566667999999999999
Q ss_pred cccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC-
Q 047705 240 SGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG- 318 (585)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~- 318 (585)
+++.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.++...+..
T Consensus 237 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 316 (477)
T 2id5_A 237 TAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316 (477)
T ss_dssp CSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGB
T ss_pred cccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHc
Confidence 9776678999999999999999999988889999999999999999999999999999999999999999999766543
Q ss_pred CCCCCCCccccCCCCcccCCC
Q 047705 319 GSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 319 ~~~~~~~~~~~~~n~~~c~~~ 339 (585)
..+..++.+++.+|++.|+.+
T Consensus 317 ~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 317 HSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCGGGCCEEECCSSCEECSGG
T ss_pred CCCcccCEEEccCCCccCccc
Confidence 456678889999999999864
No 12
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=342.77 Aligned_cols=158 Identities=23% Similarity=0.252 Sum_probs=125.9
Q ss_pred cCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCC-----CccCCCCCCCcEEEccCCcccccCC-cccCCCCC
Q 047705 179 CRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPL-----PLEIGNLKVLVGIDFSMNNFSGIIP-KEIGGLKN 252 (585)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~-----~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~ 252 (585)
..+++|++|++++|.+++..|..+..+++|+.|++++|... |..+..+++|+.|++++|.+++.+| ..+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 56788888888888888878888888888888888888733 2457788888889999888887344 45788888
Q ss_pred CcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC-CCCCCCCCccccCC
Q 047705 253 LEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR-GGSFGNFSAESFEG 331 (585)
Q Consensus 253 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~ 331 (585)
|+.|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++|++|++++|+++..++. ...+..++.+++.+
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 99999999988877776654 68899999999988 6777777889999999999999865444 34566788888899
Q ss_pred CCcccCCC
Q 047705 332 NELLCGSP 339 (585)
Q Consensus 332 n~~~c~~~ 339 (585)
|++.|+++
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99888754
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=343.59 Aligned_cols=332 Identities=22% Similarity=0.239 Sum_probs=224.6
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+++++|++|+|++|+++++.+..|.++++|++|+|++|.+++.+ ...+..+++|++|+|++|+++.++. ..|..
T Consensus 45 ~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~l~~-~~~~~ 122 (570)
T 2z63_A 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA-LGAFSGLSSLQKLVAVETNLASLEN-FPIGH 122 (570)
T ss_dssp TTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC-TTTTTTCTTCCEEECTTSCCCCSTT-CSCTT
T ss_pred hhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccC-HhhhcCccccccccccccccccCCC-ccccc
Confidence 345677777777777777777666667777777777777777776333 2334456667777777777666654 44666
Q ss_pred CCCCcEEEccCCCCcccC-CcchhhcccccccEEEeecCcceecCCccccCC----------------------------
Q 047705 83 CKSLTVIGLSNNPLDGIL-PKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNL---------------------------- 133 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l---------------------------- 133 (585)
+++|++|+|++|.++++. |. .++++++ |++|++++|.+++..+..++.+
T Consensus 123 l~~L~~L~L~~n~l~~~~lp~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~ 200 (570)
T 2z63_A 123 LKTLKELNVAHNLIQSFKLPE-YFSNLTN-LEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 200 (570)
T ss_dssp CTTCCEEECCSSCCCCCCCCG-GGGGCTT-CCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred cccccEEecCCCccceecChh-hhcccCC-CCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC
Confidence 667777777777666532 43 4555554 6666666666554443333322
Q ss_pred --------------------------------------------------------------------------------
Q 047705 134 -------------------------------------------------------------------------------- 133 (585)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (585)
T Consensus 201 ~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~ 280 (570)
T 2z63_A 201 RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC 280 (570)
T ss_dssp EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGG
T ss_pred cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcC
Confidence
Q ss_pred -CCccEEEeeCCccccccchhh------------------------------------------hCCCCCceEEccCCCC
Q 047705 134 -TNLITIDLGGNKLNGSILITL------------------------------------------SKLQKLQGLVLDDNKL 170 (585)
Q Consensus 134 -~~L~~L~L~~N~l~~~~~~~~------------------------------------------~~l~~L~~L~L~~N~l 170 (585)
++|++|++++|.+.+ .|..+ ..+++|++|++++|++
T Consensus 281 l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l 359 (570)
T 2z63_A 281 LTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGL 359 (570)
T ss_dssp GTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCC
T ss_pred cCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCcc
Confidence 333444444443332 11111 2234444555555555
Q ss_pred CccC--cccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCC-ccCCCCCCCcEEEccCCcccccCC
Q 047705 171 EGSI--PDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLP-LEIGNLKVLVGIDFSMNNFSGIIP 244 (585)
Q Consensus 171 ~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~-~~~~~l~~L~~L~ls~N~l~~~~~ 244 (585)
++.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|. ..+ ..+..+++|+.|++++|.+++..|
T Consensus 360 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 438 (570)
T 2z63_A 360 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438 (570)
T ss_dssp BEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCT
T ss_pred CccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccch
Confidence 4332 44555666666666666666644333 7777888888888876 222 357788889999999998888888
Q ss_pred cccCCCCCCcEEeecccCcc-cccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC-CCCC
Q 047705 245 KEIGGLKNLEYLFLGYNRLQ-GLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG-GSFG 322 (585)
Q Consensus 245 ~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~ 322 (585)
..|.++++|+.|++++|+++ +.+|..+..+++|+.|++++|++++..|..+..+++|++|++++|.+++.++.. ..+.
T Consensus 439 ~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 518 (570)
T 2z63_A 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLT 518 (570)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhccc
Confidence 88888999999999999887 567888888999999999999999888888888999999999999998876653 4567
Q ss_pred CCCccccCCCCcccCCCC
Q 047705 323 NFSAESFEGNELLCGSPN 340 (585)
Q Consensus 323 ~~~~~~~~~n~~~c~~~~ 340 (585)
.++.+++.+|++.|+.|.
T Consensus 519 ~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 519 SLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TCCEEECCSSCBCCCTTT
T ss_pred CCcEEEecCCcccCCCcc
Confidence 788888999999888763
No 14
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.5e-38 Score=345.38 Aligned_cols=313 Identities=20% Similarity=0.167 Sum_probs=259.8
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++.. ...+..+++|++|+|++|+++.+..+..|..
T Consensus 73 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~ 151 (606)
T 3vq2_A 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLE-SFPIGQLITLKKLNVAHNFIHSCKLPAYFSN 151 (606)
T ss_dssp TTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSS-SSCCTTCTTCCEEECCSSCCCCCCCCGGGGT
T ss_pred HHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccc-ccccCCCCCCCEEeCCCCcccceechHhHhh
Confidence 556777777777777777777666777777777777777777776333 2335577888888888888876443367888
Q ss_pred CCCCcEEEccCCCCcccCCcch--h-------------------------------------------------------
Q 047705 83 CKSLTVIGLSNNPLDGILPKTS--I------------------------------------------------------- 105 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~--~------------------------------------------------------- 105 (585)
+++|++|+|++|+++++.+..+ +
T Consensus 152 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L 231 (606)
T 3vq2_A 152 LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGL 231 (606)
T ss_dssp CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTC
T ss_pred cCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhcccccc
Confidence 8888888888888776543210 0
Q ss_pred --------------------------------------------------------------------------------
Q 047705 106 -------------------------------------------------------------------------------- 105 (585)
Q Consensus 106 -------------------------------------------------------------------------------- 105 (585)
T Consensus 232 ~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~ 311 (606)
T 3vq2_A 232 HVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQS 311 (606)
T ss_dssp EEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSE
T ss_pred ccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCE
Confidence
Q ss_pred -----------------------------------hcccccccEEEeecCcceec--CCccccCCCCccEEEeeCCcccc
Q 047705 106 -----------------------------------GNLSHSLEDFQMHNCNVTGD--IPEEIGNLTNLITIDLGGNKLNG 148 (585)
Q Consensus 106 -----------------------------------~~~~~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~~ 148 (585)
+.++ +|++|++++|.+++. .+..+..+++|++|++++|.+.+
T Consensus 312 L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 390 (606)
T 3vq2_A 312 LSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALP-SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII 390 (606)
T ss_dssp EEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCT-TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE
T ss_pred EEcccccCcccccCCCCccceeeccCCcCccchhhccCC-CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc
Confidence 0111 356666666677665 37788999999999999999985
Q ss_pred ccchhhhCCCCCceEEccCCCCCccCc-ccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC----CCCccC
Q 047705 149 SILITLSKLQKLQGLVLDDNKLEGSIP-DDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND----PLPLEI 223 (585)
Q Consensus 149 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~----~~~~~~ 223 (585)
.|..|.++++|++|++++|++++..| ..+..+++|++|++++|.+++..|..|..+++|++|++++|. ..|..+
T Consensus 391 -~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 469 (606)
T 3vq2_A 391 -MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF 469 (606)
T ss_dssp -ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred -chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhh
Confidence 55889999999999999999998887 689999999999999999999999999999999999999997 257789
Q ss_pred CCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCC-ccc
Q 047705 224 GNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLS-YLE 302 (585)
Q Consensus 224 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~ 302 (585)
..+++|+.|++++|.+++..|..|.++++|+.|+|++|++++..|..|..+++|+.|++++|+++ .+|..+..++ +|+
T Consensus 470 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 470 ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLA 548 (606)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCC
T ss_pred ccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 5666688887 599
Q ss_pred eEEeecCcCeeeCCCCC
Q 047705 303 DLNLSFNKLEGEIPRGG 319 (585)
Q Consensus 303 ~l~l~~N~l~~~~~~~~ 319 (585)
+|++++|+|.|.|+..+
T Consensus 549 ~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 549 FFNLTNNSVACICEHQK 565 (606)
T ss_dssp EEECCSCCCCCSSTTHH
T ss_pred EEEccCCCcccCCccHH
Confidence 99999999999998653
No 15
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-39 Score=318.50 Aligned_cols=168 Identities=29% Similarity=0.437 Sum_probs=151.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||+||+|++. +++.||||++++.. ....+.+.+|++++++++|||||+++++|++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 79999999998642 334577899999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
|||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998754 6899999999999999999999 99999999999999999999999999999998754443
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......+||+.||||
T Consensus 188 ~~~~~~~~GTp~YmAP 203 (311)
T 4aw0_A 188 QARANSFVGTAQYVSP 203 (311)
T ss_dssp CCCBCCCCSCGGGCCH
T ss_pred cccccCcccCcccCCH
Confidence 3344567999999998
No 16
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.5e-38 Score=343.17 Aligned_cols=329 Identities=20% Similarity=0.196 Sum_probs=237.5
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+++++|++|+|++|+++++.|..|.++++|++|+|++|++++..+. .+..+++|++|+|++|+++.++. ..|..
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~l~~-~~~~~ 127 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAET-ALSGPKALKHLFFIQTGISSIDF-IPLHN 127 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTT-TTSSCTTCCEEECTTSCCSCGGG-SCCTT
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChh-hhcccccccEeeccccCcccCCc-chhcc
Confidence 66788888888888888888888888888888888888888888754443 34578888888888888888754 66888
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCcc--EEEeeCCccccccchhhhCC---
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLI--TIDLGGNKLNGSILITLSKL--- 157 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l--- 157 (585)
+++|++|+|++|+++++....+.+ +++ |++|++++|.+++..+..|..+++|+ +|++++|.+.+..+..|...
T Consensus 128 l~~L~~L~L~~n~l~~~~~~~~~~-l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~ 205 (606)
T 3t6q_A 128 QKTLESLYLGSNHISSIKLPKGFP-TEK-LKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205 (606)
T ss_dssp CTTCCEEECCSSCCCCCCCCTTCC-CTT-CCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEE
T ss_pred CCcccEEECCCCcccccCcccccC-Ccc-cCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccc
Confidence 888888888888887754442333 554 88888888888887777788888888 77888887776665554321
Q ss_pred ------------------------------------------------CCCceEEccCCCCCccCcccccCCCCCcEEEc
Q 047705 158 ------------------------------------------------QKLQGLVLDDNKLEGSIPDDICRLVELYKLEL 189 (585)
Q Consensus 158 ------------------------------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 189 (585)
.+|+.|++++|.++++.+..|..+++|++|++
T Consensus 206 ~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 285 (606)
T 3t6q_A 206 SLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL 285 (606)
T ss_dssp EEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEEC
T ss_pred ccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEec
Confidence 04666666777777666666777777777777
Q ss_pred CCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCc-ccCCCCCCcEEeecccCccc
Q 047705 190 GGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPK-EIGGLKNLEYLFLGYNRLQG 265 (585)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~ 265 (585)
++|.++ .+|..+..+++|++|++++|. ..|..+..+++|+.|++++|.+.+..+. .+..+++|++|++++|++++
T Consensus 286 ~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp TTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCE
T ss_pred cCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccc
Confidence 777777 566667777777777777776 3344667777777777777777644443 46777777777777777776
Q ss_pred cc--CccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC--CCCCCCCCccccCCCCccc
Q 047705 266 LI--PDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR--GGSFGNFSAESFEGNELLC 336 (585)
Q Consensus 266 ~~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~--~~~~~~~~~~~~~~n~~~c 336 (585)
.. +..+..+++|+.|++++|++++..|..+..+++|++|++++|.+.+..+. ...+..++.+++.+|....
T Consensus 365 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 439 (606)
T 3t6q_A 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439 (606)
T ss_dssp EEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBT
T ss_pred ccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCC
Confidence 55 56677777777777777777777677777777777777777777765543 2345566666676665543
No 17
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-37 Score=347.07 Aligned_cols=337 Identities=22% Similarity=0.224 Sum_probs=262.9
Q ss_pred CccccCCCC--CCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCC-----------------------------
Q 047705 3 PLEIGNLQN--LEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLS----------------------------- 51 (585)
Q Consensus 3 p~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----------------------------- 51 (585)
|..|..++. |++|+|++|++++..|..|..+++|++|+|++|.+++.++
T Consensus 239 ~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp 318 (680)
T 1ziw_A 239 NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP 318 (680)
T ss_dssp TTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CC
T ss_pred hhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccc
Confidence 334444432 5555555555555555555555555555555555543322
Q ss_pred ---ccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCccc-CCcchhhccc-ccccEEEeecCcceecC
Q 047705 52 ---SITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGI-LPKTSIGNLS-HSLEDFQMHNCNVTGDI 126 (585)
Q Consensus 52 ---~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~-~~L~~L~l~~n~l~~~~ 126 (585)
...+..+++|++|+|++|+++.++. ..|..+++|++|++++|.+... .+...+..+. .+|+.|++++|++++..
T Consensus 319 ~i~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 319 KIDDFSFQWLKCLEHLNMEDNDIPGIKS-NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp EECTTTTTTCTTCCEEECCSCCBCCCCT-TTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred ccChhhcccCCCCCEEECCCCccCCCCh-hHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 1134467788888888888888765 6788888888888888875321 2221233222 35999999999999999
Q ss_pred CccccCCCCccEEEeeCCccccccc-hhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccc--ccCccccc
Q 047705 127 PEEIGNLTNLITIDLGGNKLNGSIL-ITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLS--RSIPACFN 203 (585)
Q Consensus 127 ~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~ 203 (585)
|..|..+++|++|+|++|.+.+..+ ..|.++++|++|++++|++++..+..|..+++|++|++++|.+. +..|..|.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 9999999999999999999986554 78999999999999999999888999999999999999999987 56788899
Q ss_pred CcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCC--------cccCCCCCCcEEeecccCcccccCcccc
Q 047705 204 NLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIP--------KEIGGLKNLEYLFLGYNRLQGLIPDSFG 272 (585)
Q Consensus 204 ~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 272 (585)
.+++|+.|++++|. ..+..+..+++|+.|++++|++++..+ ..|.++++|+.|+|++|+++.+.+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 99999999999997 334458899999999999999987532 2478899999999999999976667899
Q ss_pred CcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCC--CCCCCCccccCCCCcccCCCC
Q 047705 273 NLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGG--SFGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 273 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~ 340 (585)
.+++|+.|++++|++++..+..|..+++|+.|++++|.+++..+... .+..++.+++.+|||.|+++.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999999998877888899999999999999998766432 456788899999999999763
No 18
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=341.00 Aligned_cols=333 Identities=22% Similarity=0.257 Sum_probs=273.2
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|..|+++++|++|+|++|+++...|..|.++++|++|+|++|.++ .++...+..+++|++|+|++|.++.++.+..|..
T Consensus 69 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~ 147 (570)
T 2z63_A 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147 (570)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG
T ss_pred cccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccc-cCCCccccccccccEEecCCCccceecChhhhcc
Confidence 567899999999999999999888899999999999999999998 4444446689999999999999998643377999
Q ss_pred CCCCcEEEccCCCCcccCCcc-----------------------------------------------------------
Q 047705 83 CKSLTVIGLSNNPLDGILPKT----------------------------------------------------------- 103 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~----------------------------------------------------------- 103 (585)
+++|++|++++|+++++.+..
T Consensus 148 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l 227 (570)
T 2z63_A 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL 227 (570)
T ss_dssp CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTC
T ss_pred cCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCcccc
Confidence 999999999999887553321
Q ss_pred -------------------------------------------------hhhcccccccEEEeecCcceecCCccc----
Q 047705 104 -------------------------------------------------SIGNLSHSLEDFQMHNCNVTGDIPEEI---- 130 (585)
Q Consensus 104 -------------------------------------------------~~~~~~~~L~~L~l~~n~l~~~~~~~~---- 130 (585)
.+..++ +|++|++++|.+++ +|..+
T Consensus 228 ~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~~-l~~~~~~~~ 305 (570)
T 2z63_A 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIER-VKDFSYNFG 305 (570)
T ss_dssp EEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEECS-CCBCCSCCC
T ss_pred ceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccchh-hhhhhccCC
Confidence 011112 25566666655552 23222
Q ss_pred --------------------------------------cCCCCccEEEeeCCcccccc--chhhhCCCCCceEEccCCCC
Q 047705 131 --------------------------------------GNLTNLITIDLGGNKLNGSI--LITLSKLQKLQGLVLDDNKL 170 (585)
Q Consensus 131 --------------------------------------~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l 170 (585)
..+++|++|++++|.+.+.. +..+.++++|++|++++|.+
T Consensus 306 L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l 385 (570)
T 2z63_A 306 WQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385 (570)
T ss_dssp CSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSE
T ss_pred ccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcc
Confidence 45678888888888888654 78899999999999999999
Q ss_pred CccCcccccCCCCCcEEEcCCCcccccCc-ccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCccc-ccCCc
Q 047705 171 EGSIPDDICRLVELYKLELGGNKLSRSIP-ACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFS-GIIPK 245 (585)
Q Consensus 171 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~-~~~~~ 245 (585)
++..+. +..+++|++|++++|.+.+..+ ..|..+++|++|++++|. ..|..+..+++|+.|++++|.++ +..|.
T Consensus 386 ~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~ 464 (570)
T 2z63_A 386 ITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 464 (570)
T ss_dssp EEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred cccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchh
Confidence 966555 9999999999999999997766 578999999999999997 56777899999999999999998 57889
Q ss_pred ccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCCC-CCC
Q 047705 246 EIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSF-GNF 324 (585)
Q Consensus 246 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~-~~~ 324 (585)
.|..+++|++|++++|++++..|..|..+++|+.|++++|++++..|..+..+++|+.|++++|+++|.||....+ .++
T Consensus 465 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl 544 (570)
T 2z63_A 465 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 544 (570)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHH
T ss_pred hhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHH
Confidence 9999999999999999999998999999999999999999999988888999999999999999999999975433 211
Q ss_pred --CccccCCCCcccCCCC
Q 047705 325 --SAESFEGNELLCGSPN 340 (585)
Q Consensus 325 --~~~~~~~n~~~c~~~~ 340 (585)
....+.+.+ .|..|.
T Consensus 545 ~~~~~~~~~~~-~C~~~~ 561 (570)
T 2z63_A 545 NKNSQKEQGSA-KCSGSG 561 (570)
T ss_dssp HHTGGGEESCC-BBTTTC
T ss_pred HhccccCCCch-hhCCCC
Confidence 112334444 676653
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.5e-38 Score=318.81 Aligned_cols=168 Identities=23% Similarity=0.405 Sum_probs=142.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++++.||+|+||+||+|++. +|+.||||+++.. .....+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999875 7999999999754 2345678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 490 EYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+||+|.+++...+ ..+++..++.|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 9999999999997654 35789999999999999999999 999999999999999999999999999999875321
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.......+||+.||||
T Consensus 179 -~~~~~~~~GT~~YmAP 194 (350)
T 4b9d_A 179 -VELARACIGTPYYLSP 194 (350)
T ss_dssp -HHHHHHHHSCCTTCCH
T ss_pred -cccccccCCCccccCH
Confidence 1123456899999998
No 20
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.3e-38 Score=316.84 Aligned_cols=165 Identities=28% Similarity=0.337 Sum_probs=149.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
+.|++.+.||+|+||+||+|+++ +|+.||||+++.......+.+.+|+++|+.++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999999999876 79999999998766556677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccc
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 572 (585)
+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999999764 5899999999999999999999 9999999999999999999999999999999764322 23
Q ss_pred cccccccccccCC
Q 047705 573 QTQTLATIGYMAP 585 (585)
Q Consensus 573 ~~~~~gt~~y~aP 585 (585)
....+||++||||
T Consensus 227 ~~~~~GTp~YmAP 239 (346)
T 4fih_A 227 RKSLVGTPYWMAP 239 (346)
T ss_dssp BCCCCSCGGGCCH
T ss_pred ccccccCcCcCCH
Confidence 3567899999998
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.4e-38 Score=344.76 Aligned_cols=303 Identities=17% Similarity=0.228 Sum_probs=201.3
Q ss_pred cccccCCccccCCCCCCEEecCCCcCCC------------------cCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 21 KLIGTVPVAIFNVSTLKLLGLQDNSLSG------------------SLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 21 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
++++ +|..|+++++|++|+|++|.+++ .++.+.+..+++|++|+|++|++...-. ..|.+
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p-~~l~~ 271 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP-TFLKA 271 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC-TTTTT
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh-HHHhc
Confidence 3444 67777888888888888888876 3333333367788888888887655322 66777
Q ss_pred CCCCcEEEccCCC-Ccc-cCCcchhhcc------cccccEEEeecCcceecCCc--cccCCCCccEEEeeCCccccccch
Q 047705 83 CKSLTVIGLSNNP-LDG-ILPKTSIGNL------SHSLEDFQMHNCNVTGDIPE--EIGNLTNLITIDLGGNKLNGSILI 152 (585)
Q Consensus 83 l~~L~~L~Ls~N~-l~~-~~~~~~~~~~------~~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~ 152 (585)
+++|++|+|++|+ +++ ..|. .++.+ ++ |++|++++|+++ .+|. .++.+++|++|++++|++.+.+|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~-~~~~L~~~~~l~~-L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKD-DWQALADAPVGEK-IQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHH-HHHHHHHSGGGGT-CCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-
T ss_pred CCCCCEEECcCCCCCccccchH-HHHhhhccccCCC-CCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-
Confidence 8888888888887 766 4554 44444 43 778888887777 6666 77777778888887777776666
Q ss_pred hhhCCCCCceEEccCCCCCccCcccccCCCC-CcEEEcCCCcccccCcccccCcc--cchhhcCCCCC---CCCccCC--
Q 047705 153 TLSKLQKLQGLVLDDNKLEGSIPDDICRLVE-LYKLELGGNKLSRSIPACFNNLI--ALRILSLGSND---PLPLEIG-- 224 (585)
Q Consensus 153 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~n~---~~~~~~~-- 224 (585)
.|..+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+..+. +|+.|++++|. ..|..+.
T Consensus 348 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 425 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL 425 (636)
T ss_dssp CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTT
T ss_pred hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccc
Confidence 7777777777777777777 66666777777 777777777777 5666665543 67777777776 3444455
Q ss_pred -----CCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcC-------CCCEEeCCCCccCccCC
Q 047705 225 -----NLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLI-------SLKFLNLSNNNLSGAIP 292 (585)
Q Consensus 225 -----~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~-------~L~~L~l~~N~l~~~~~ 292 (585)
.+++|+.|++++|.++++.+..+..+++|++|+|++|+++.+.+..+.... +|+.|++++|+++ .+|
T Consensus 426 ~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 504 (636)
T 4eco_A 426 DPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLS 504 (636)
T ss_dssp CSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCC
T ss_pred ccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccC
Confidence 556777777777777754444455667777777777777643333333222 6777777777777 455
Q ss_pred hhhc--cCCccceEEeecCcCeeeCCCCCCCCCCCccccCCC
Q 047705 293 ASLE--KLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGN 332 (585)
Q Consensus 293 ~~~~--~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n 332 (585)
..+. .+++|+.|+|++|++++.+.....+..++.+++.+|
T Consensus 505 ~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 505 DDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp GGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSC
T ss_pred hhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCC
Confidence 5555 667777777777777663333344555666666444
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-37 Score=335.96 Aligned_cols=168 Identities=20% Similarity=0.233 Sum_probs=84.3
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+.+++|++|+|++|++++..|..|.++++|++|+|++|.+++.++. .+..+++|++|+|++|+++.++....|..
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 121 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSS-WFGPLSSLKYLNLMGNPYQTLGVTSLFPN 121 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHH-HHTTCTTCCEEECTTCCCSSSCSSCSCTT
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHH-HhccCCCCcEEECCCCcccccchhhhhhc
Confidence 34555555555555555555555555555555555555555555533222 22345555555555555554432244555
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCce
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQG 162 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 162 (585)
+++|++|++++|++.+..+...+..+++ |++|++++|.+++..|..+..+++|++|++++|.+.......+..+++|++
T Consensus 122 l~~L~~L~L~~n~~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 200 (549)
T 2z81_A 122 LTNLQTLRIGNVETFSEIRRIDFAGLTS-LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRY 200 (549)
T ss_dssp CTTCCEEEEEESSSCCEECTTTTTTCCE-EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSE
T ss_pred cCCccEEECCCCccccccCHhhhhcccc-cCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccE
Confidence 5555555555555323333224445544 666666666666555555554444433333333333222222233455555
Q ss_pred EEccCCCCCc
Q 047705 163 LVLDDNKLEG 172 (585)
Q Consensus 163 L~L~~N~l~~ 172 (585)
|++++|++++
T Consensus 201 L~L~~n~l~~ 210 (549)
T 2z81_A 201 LELRDTNLAR 210 (549)
T ss_dssp EEEESCBCTT
T ss_pred EEccCCcccc
Confidence 5555555543
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=333.89 Aligned_cols=304 Identities=23% Similarity=0.243 Sum_probs=235.3
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+.+++|++|+|++|++++..|..|.++++|++|+|++|+|++.+. . .+++|++|+|++|+++.++.+..|..
T Consensus 38 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~-~---~l~~L~~L~L~~N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISC-H---PTVNLKHLDLSFNAFDALPICKEFGN 113 (520)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEEC-C---CCCCCSEEECCSSCCSSCCCCGGGGG
T ss_pred hhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCc-c---ccCCccEEeccCCccccccchhhhcc
Confidence 3578888888888888888887778888888888888888888874333 2 57888888888888887654467888
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccc----------------------------------------------------
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSH---------------------------------------------------- 110 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~---------------------------------------------------- 110 (585)
+++|++|+|++|++++. .+..++.
T Consensus 114 l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l 189 (520)
T 2z7x_B 114 MSQLKFLGLSTTHLEKS----SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTV 189 (520)
T ss_dssp CTTCCEEEEEESSCCGG----GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTC
T ss_pred CCcceEEEecCcccchh----hccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcc
Confidence 88888888888877531 1222221
Q ss_pred ----------------------------------------------------------cccEEEeecCcceecCCccc--
Q 047705 111 ----------------------------------------------------------SLEDFQMHNCNVTGDIPEEI-- 130 (585)
Q Consensus 111 ----------------------------------------------------------~L~~L~l~~n~l~~~~~~~~-- 130 (585)
+|++|++++|++++.+|..+
T Consensus 190 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 269 (520)
T 2z7x_B 190 ANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD 269 (520)
T ss_dssp SEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCC
T ss_pred cceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhh
Confidence 24455555555554455444
Q ss_pred ---cCCCCccEEEeeCCccccccchh-------------------------hhCCCCCceEEccCCCCCccCcccccCCC
Q 047705 131 ---GNLTNLITIDLGGNKLNGSILIT-------------------------LSKLQKLQGLVLDDNKLEGSIPDDICRLV 182 (585)
Q Consensus 131 ---~~l~~L~~L~L~~N~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 182 (585)
..+++|+.+++++|.+ ..+... +..+++|++|++++|++++..|..+..++
T Consensus 270 ~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 348 (520)
T 2z7x_B 270 YSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLT 348 (520)
T ss_dssp CCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCS
T ss_pred cccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCC
Confidence 4444444444444443 111011 16788999999999999998999999999
Q ss_pred CCcEEEcCCCcccc--cCcccccCcccchhhcCCCCCC---CCcc-CCCCCCCcEEEccCCcccccCCcccCCCCCCcEE
Q 047705 183 ELYKLELGGNKLSR--SIPACFNNLIALRILSLGSNDP---LPLE-IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYL 256 (585)
Q Consensus 183 ~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~~---~~~~-~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 256 (585)
+|++|+|++|++++ ..|..+..+++|++|++++|.. +|.. +..+++|+.|++++|++++..|..+. ++|+.|
T Consensus 349 ~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L 426 (520)
T 2z7x_B 349 ELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVL 426 (520)
T ss_dssp SCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEE
T ss_pred CCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEE
Confidence 99999999999996 4567899999999999999982 5554 78899999999999999988777665 799999
Q ss_pred eecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 257 FLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 257 ~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
++++|+++ .+|..+..+++|+.|++++|++++..+..+..+++|++|++++|+|+|.|+..
T Consensus 427 ~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 487 (520)
T 2z7x_B 427 DLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487 (520)
T ss_dssp ECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred ECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCch
Confidence 99999999 67777779999999999999999654445889999999999999999998853
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-37 Score=335.23 Aligned_cols=306 Identities=20% Similarity=0.209 Sum_probs=255.8
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+.+++|++|+|++|++++..|..|.++++|++|+|++|.|++ ++.. .+++|++|+|++|+++.++.+..|..
T Consensus 69 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~ 144 (562)
T 3a79_B 69 MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC---PMASLRHLDLSFNDFDVLPVCKEFGN 144 (562)
T ss_dssp GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC---CCTTCSEEECCSSCCSBCCCCGGGGG
T ss_pred hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc---ccccCCEEECCCCCccccCchHhhcc
Confidence 4689999999999999999999999999999999999999999984 4433 68999999999999999875478999
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccc-cccEEEeecCcc--eecCCccccCCC-------------------------
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSH-SLEDFQMHNCNV--TGDIPEEIGNLT------------------------- 134 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~-~L~~L~l~~n~l--~~~~~~~~~~l~------------------------- 134 (585)
+++|++|+|++|+++.. .+..++. .|++|++++|.+ ++..|..|..+.
T Consensus 145 l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l 220 (562)
T 3a79_B 145 LTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNAL 220 (562)
T ss_dssp CTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSE
T ss_pred cCcccEEecCCCccccC----chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhccccc
Confidence 99999999999999753 2333333 138888888877 666555555433
Q ss_pred --------------------------------------------------------CccEEEeeCCccccccchhh----
Q 047705 135 --------------------------------------------------------NLITIDLGGNKLNGSILITL---- 154 (585)
Q Consensus 135 --------------------------------------------------------~L~~L~L~~N~l~~~~~~~~---- 154 (585)
+|++|++++|.+.+..|..+
T Consensus 221 ~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~ 300 (562)
T 3a79_B 221 GHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYS 300 (562)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCC
T ss_pred ceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcc
Confidence 66677777777765444433
Q ss_pred -------------------------------------------------hCCCCCceEEccCCCCCccCcccccCCCCCc
Q 047705 155 -------------------------------------------------SKLQKLQGLVLDDNKLEGSIPDDICRLVELY 185 (585)
Q Consensus 155 -------------------------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 185 (585)
..+++|++|++++|++++..|..+..+++|+
T Consensus 301 ~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 380 (562)
T 3a79_B 301 ETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQ 380 (562)
T ss_dssp SCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCC
T ss_pred cccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCC
Confidence 6788999999999999998999999999999
Q ss_pred EEEcCCCccccc--CcccccCcccchhhcCCCCCC---CCcc-CCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeec
Q 047705 186 KLELGGNKLSRS--IPACFNNLIALRILSLGSNDP---LPLE-IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLG 259 (585)
Q Consensus 186 ~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~~n~~---~~~~-~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls 259 (585)
+|+|++|++++. .|..|..+++|+.|++++|.. +|.. +..+++|+.|++++|++++..|..+. ++|+.|+|+
T Consensus 381 ~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~ 458 (562)
T 3a79_B 381 TLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLH 458 (562)
T ss_dssp EEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECC
T ss_pred EEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECC
Confidence 999999999963 346789999999999999982 5554 78899999999999999987776654 799999999
Q ss_pred ccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCC
Q 047705 260 YNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGG 319 (585)
Q Consensus 260 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 319 (585)
+|+++ .+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+|.|.|+..+
T Consensus 459 ~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 459 NNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp SSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred CCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHH
Confidence 99999 466666699999999999999995444448999999999999999999998643
No 25
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.2e-37 Score=344.35 Aligned_cols=326 Identities=17% Similarity=0.238 Sum_probs=277.8
Q ss_pred CCcccc--CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCc-CCC-cCCcc------ccCCCCCccEEEccCCCC
Q 047705 2 IPLEIG--NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNS-LSG-SLSSI------TDVRLPNLEELVLWGNNF 71 (585)
Q Consensus 2 ~p~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~------~~~~l~~L~~L~L~~n~l 71 (585)
||.+++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|.. .+..+++|++|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 899988 99999999999999999999999999999999999998 886 44431 234577999999999999
Q ss_pred CCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCC-ccEEEeeCCcccccc
Q 047705 72 SELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTN-LITIDLGGNKLNGSI 150 (585)
Q Consensus 72 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~ 150 (585)
+.+|....|..+++|++|+|++|+++ .+| .++.+++ |+.|+|++|.++ .+|..+..+++ |++|+|++|.+. .+
T Consensus 561 ~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp--~~~~L~~-L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~l 634 (876)
T 4ecn_A 561 EEFPASASLQKMVKLGLLDCVHNKVR-HLE--AFGTNVK-LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YI 634 (876)
T ss_dssp CBCCCHHHHTTCTTCCEEECTTSCCC-BCC--CCCTTSE-ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SC
T ss_pred CccCChhhhhcCCCCCEEECCCCCcc-cch--hhcCCCc-ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cC
Confidence 98872127999999999999999998 555 5777776 999999999999 78888999999 999999999999 66
Q ss_pred chhhhCCCC--CceEEccCCCCCccCcccc---c--CCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCc
Q 047705 151 LITLSKLQK--LQGLVLDDNKLEGSIPDDI---C--RLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPL 221 (585)
Q Consensus 151 ~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~ 221 (585)
|..|..++. |+.|+|++|++++.+|... . .+++|+.|+|++|.++..++..+..+++|+.|+|++|. .+|.
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~ 714 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCT
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccCh
Confidence 777776654 9999999999998766322 2 34589999999999995544556689999999999998 4454
Q ss_pred cCCC--------CCCCcEEEccCCcccccCCcccC--CCCCCcEEeecccCcccccCccccCcCCCCEEeCCC------C
Q 047705 222 EIGN--------LKVLVGIDFSMNNFSGIIPKEIG--GLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSN------N 285 (585)
Q Consensus 222 ~~~~--------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~------N 285 (585)
.+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N 792 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGN 792 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCC
T ss_pred HHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccc
Confidence 4332 339999999999999 5777776 99999999999999998 688899999999999976 8
Q ss_pred ccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccC
Q 047705 286 NLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCG 337 (585)
Q Consensus 286 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 337 (585)
++.+.+|..+..+++|+.|+|++|.+ +.+|.. ....++.+++.+|++..-
T Consensus 793 ~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~i 842 (876)
T 4ecn_A 793 RILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNISI 842 (876)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCEE
T ss_pred cccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCcc
Confidence 88999999999999999999999999 566654 336888899999987543
No 26
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-36 Score=314.37 Aligned_cols=312 Identities=21% Similarity=0.228 Sum_probs=267.7
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCc
Q 047705 8 NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLT 87 (585)
Q Consensus 8 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 87 (585)
.++++++|++++|.++.+.+..|..+++|++|+|++|.|++ ++...+..+++|++|+|++|+++.++. ..|..+++|+
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~ 120 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPP-HVFQNVPLLT 120 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCTTCC
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCH-HHhcCCCCCC
Confidence 46899999999999987766778999999999999999984 444445689999999999999999986 7899999999
Q ss_pred EEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC
Q 047705 88 VIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167 (585)
Q Consensus 88 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 167 (585)
+|+|++|+++.+.+. .++.+++ |++|++++|.+++..+..|..+++|++|++++|++++. .+..+++|+.|++++
T Consensus 121 ~L~L~~n~l~~l~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 121 VLVLERNDLSSLPRG-IFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSY 195 (390)
T ss_dssp EEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCS
T ss_pred EEECCCCccCcCCHH-HhcCCCC-CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccc
Confidence 999999999865554 5677776 99999999999999899999999999999999999965 356788999999999
Q ss_pred CCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC-CCCccCCCCCCCcEEEccCCcccccCCcc
Q 047705 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND-PLPLEIGNLKVLVGIDFSMNNFSGIIPKE 246 (585)
Q Consensus 168 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 246 (585)
|.+++. ...++|++|++++|.+...... ..++|+.|++++|. .....+..+++|+.|++++|.+++..|..
T Consensus 196 n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 267 (390)
T 3o6n_A 196 NLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHP 267 (390)
T ss_dssp SCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhH
Confidence 999843 3456899999999999865332 24789999999998 44456889999999999999999988999
Q ss_pred cCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCCCc
Q 047705 247 IGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSA 326 (585)
Q Consensus 247 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~ 326 (585)
|.++++|+.|++++|++++. |..+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++... ...+..++.
T Consensus 268 ~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~ 343 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKN 343 (390)
T ss_dssp GTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSE
T ss_pred ccccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCE
Confidence 99999999999999999864 666778899999999999998 45667888999999999999998653 456778888
Q ss_pred cccCCCCcccCC
Q 047705 327 ESFEGNELLCGS 338 (585)
Q Consensus 327 ~~~~~n~~~c~~ 338 (585)
+++.+|++.|+.
T Consensus 344 L~l~~N~~~~~~ 355 (390)
T 3o6n_A 344 LTLSHNDWDCNS 355 (390)
T ss_dssp EECCSSCEEHHH
T ss_pred EEcCCCCccchh
Confidence 999999998864
No 27
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.5e-38 Score=310.90 Aligned_cols=169 Identities=29% Similarity=0.475 Sum_probs=147.5
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56888999999999999999863 477899999987666667889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEE
Q 047705 488 VLEYMPQGSLEKHLYSTN------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYL 555 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl 555 (585)
|||||++|+|.++++... ..+++.++..++.||++||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 36899999999999999999999 899999999999999999999999
Q ss_pred eeecccccccCCCCccccccccccccccCC
Q 047705 556 SDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 556 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+|||+|+...............||+.||||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 199 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred CCcccceecCCCCceeecCceecChhhcCH
Confidence 999999876543333334456799999998
No 28
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=318.81 Aligned_cols=165 Identities=28% Similarity=0.337 Sum_probs=149.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
+.|++.+.||+|+||+||+|+++ +|+.||||+++.......+.+.+|+++|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999876 79999999998765556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccc
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 572 (585)
+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 999999999765 5899999999999999999999 9999999999999999999999999999998764322 23
Q ss_pred cccccccccccCC
Q 047705 573 QTQTLATIGYMAP 585 (585)
Q Consensus 573 ~~~~~gt~~y~aP 585 (585)
....+||++||||
T Consensus 304 ~~~~~GTp~YmAP 316 (423)
T 4fie_A 304 RKSLVGTPYWMAP 316 (423)
T ss_dssp BCCCEECTTTCCH
T ss_pred ccccccCcCcCCH
Confidence 3567899999998
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=343.19 Aligned_cols=309 Identities=23% Similarity=0.243 Sum_probs=266.3
Q ss_pred CCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 1 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
.||. -.+++++|||++|+|++..|..|.++++|++|+|++|.+.+.++...+.++++|++|+|++|.++.++. ..|
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p-~~~ 93 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP-DAF 93 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT-TSS
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH-hHc
Confidence 3675 568999999999999999999999999999999999976667766667789999999999999999865 889
Q ss_pred cCCCCCcEEEccCCCCcccCCc-chhhcccccccEEEeecCcceecCC-ccccCCCCccEEEeeCCccccccchhhhCC-
Q 047705 81 SNCKSLTVIGLSNNPLDGILPK-TSIGNLSHSLEDFQMHNCNVTGDIP-EEIGNLTNLITIDLGGNKLNGSILITLSKL- 157 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 157 (585)
..+++|++|+|++|.+++..+. .+++++++ |++|+|++|.+++..+ ..|+++++|++|+|++|.+.+..+..|..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~-L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKA-LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSS-CCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCC-CCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 9999999999999999875443 34777876 9999999999988765 579999999999999999999888888887
Q ss_pred -CCCceEEccCCCCCccCcccccCCCC------CcEEEcCCCcccccCcccccC--------------------------
Q 047705 158 -QKLQGLVLDDNKLEGSIPDDICRLVE------LYKLELGGNKLSRSIPACFNN-------------------------- 204 (585)
Q Consensus 158 -~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~~N~l~~~~~~~~~~-------------------------- 204 (585)
++|+.|++++|.+++..|..+..+++ |++|++++|.+++..+..+..
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 89999999999999888877776665 999999999877655543322
Q ss_pred ------------cccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCc
Q 047705 205 ------------LIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPD 269 (585)
Q Consensus 205 ------------l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 269 (585)
.++|+.|++++|. ..+..+..+++|+.|++++|.+++..+..|.++++|++|+|++|++++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 2678899999987 4566788899999999999999988888999999999999999999988888
Q ss_pred cccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeee
Q 047705 270 SFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGE 314 (585)
Q Consensus 270 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 314 (585)
.|..+++|+.|++++|++++..+..|..+++|++|++++|.+++.
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI 377 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc
Confidence 999999999999999999988888888999999999999998753
No 30
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.7e-36 Score=333.80 Aligned_cols=311 Identities=24% Similarity=0.281 Sum_probs=268.3
Q ss_pred CccccCCCCCCEEecCCCcccccCCc---------------------------------cccCCCCCCEEecCCCcCCCc
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPV---------------------------------AIFNVSTLKLLGLQDNSLSGS 49 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~---------------------------------~~~~l~~L~~L~L~~n~l~~~ 49 (585)
|..|+.+++|++|+|++|++++..|. .|..+++|++|+|++|.+++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 56678888888888888877766554 455567777777888888754
Q ss_pred CCccccCCCCCccEEEccCCCC--CCCccCccccCC--CCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceec
Q 047705 50 LSSITDVRLPNLEELVLWGNNF--SELNFLSSLSNC--KSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGD 125 (585)
Q Consensus 50 ~~~~~~~~l~~L~~L~L~~n~l--~~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 125 (585)
. ...+..+++|++|+|++|.+ ..++. ..|..+ ++|++|++++|+++++.+. .+..+++ |+.|++++|.+++.
T Consensus 345 ~-~~~~~~l~~L~~L~Ls~n~~~~~~l~~-~~f~~~~~~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~ 420 (680)
T 1ziw_A 345 K-SNMFTGLINLKYLSLSNSFTSLRTLTN-ETFVSLAHSPLHILNLTKNKISKIESD-AFSWLGH-LEVLDLGLNEIGQE 420 (680)
T ss_dssp C-TTTTTTCTTCCEEECTTCBSCCCEECT-TTTGGGTTSCCCEEECTTSCCCEECTT-TTTTCTT-CCEEECCSSCCEEE
T ss_pred C-hhHhccccCCcEEECCCCchhhhhcch-hhhcccccCcCceEECCCCCCCeEChh-hhhCCCC-CCEEeCCCCcCccc
Confidence 4 44456899999999999974 44443 344433 6899999999999988776 6777776 99999999999987
Q ss_pred CC-ccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCC--ccCcccccCCCCCcEEEcCCCcccccCcccc
Q 047705 126 IP-EEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLE--GSIPDDICRLVELYKLELGGNKLSRSIPACF 202 (585)
Q Consensus 126 ~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (585)
++ ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|++|+|++|.+++..+..|
T Consensus 421 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 500 (680)
T 1ziw_A 421 LTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML 500 (680)
T ss_dssp CCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred cCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhh
Confidence 66 78999999999999999999999999999999999999999987 5678899999999999999999998888889
Q ss_pred cCcccchhhcCCCCCCC-------C----ccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccc
Q 047705 203 NNLIALRILSLGSNDPL-------P----LEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271 (585)
Q Consensus 203 ~~l~~L~~L~l~~n~~~-------~----~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 271 (585)
..+++|++|++++|... | ..+..+++|+.|++++|+++.+.+..|.++++|+.|+|++|+++++.+..|
T Consensus 501 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 580 (680)
T 1ziw_A 501 EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVF 580 (680)
T ss_dssp TTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHh
Confidence 99999999999999721 1 237889999999999999997777789999999999999999998888889
Q ss_pred cCcCCCCEEeCCCCccCccCChhhc-cCCccceEEeecCcCeeeCCC
Q 047705 272 GNLISLKFLNLSNNNLSGAIPASLE-KLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 272 ~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~~~~~~ 317 (585)
..+++|+.|++++|++++..+..+. .+++|+.+++++|+|.|+|+.
T Consensus 581 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 581 NNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999999998888887 789999999999999999986
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8e-36 Score=329.06 Aligned_cols=183 Identities=24% Similarity=0.317 Sum_probs=142.0
Q ss_pred CCCCceEEccCCCCCcc--Ccc-----------------------cccCCCCCcEEEcCCCcccccCc-ccccCcccchh
Q 047705 157 LQKLQGLVLDDNKLEGS--IPD-----------------------DICRLVELYKLELGGNKLSRSIP-ACFNNLIALRI 210 (585)
Q Consensus 157 l~~L~~L~L~~N~l~~~--~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 210 (585)
+++|+.|++++|.+... .+. .+..+++|+.+++++|......+ ..|..+++++.
T Consensus 370 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred ccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccc
Confidence 45677777777776532 222 33445556666666555543333 35667777888
Q ss_pred hcCCCCC---CCCccCCCCCCCcEEEccCCcc-cccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCc
Q 047705 211 LSLGSND---PLPLEIGNLKVLVGIDFSMNNF-SGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNN 286 (585)
Q Consensus 211 L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 286 (585)
++++.|. ..+..+..++.|+.|++++|.+ .+..|..|..+++|++|+|++|+++++.|..|.++++|++|+|++|+
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~ 529 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCc
Confidence 8888876 4556677888999999999874 45678889999999999999999999989999999999999999999
Q ss_pred cCccCChhhccCCccceEEeecCcCeeeCCCCC-CC-CCCCccccCCCCcccCCC
Q 047705 287 LSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGG-SF-GNFSAESFEGNELLCGSP 339 (585)
Q Consensus 287 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~-~~-~~~~~~~~~~n~~~c~~~ 339 (585)
|++..|..|..+++|++|||++|++++..|... .+ ..++.+++.+|||.|++.
T Consensus 530 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 530 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999888899999999999999999998877642 23 568888999999999864
No 32
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=306.42 Aligned_cols=167 Identities=28% Similarity=0.503 Sum_probs=140.8
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.+++++.+.||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||++++++.. +..|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4678899999999999999998643 6999998743 33456789999999999999999999998865 56899999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
||+||+|.+++......+++.++..|+.||++||+||| +++||||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887778999999999999999999999 899999999999999999999999999999876433333
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 189 ~~~~~~~GT~~ymAP 203 (307)
T 3omv_A 189 QQVEQPTGSVLWMAP 203 (307)
T ss_dssp -----CCCCTTSCCH
T ss_pred eeecccccCCCccCH
Confidence 334567899999998
No 33
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=310.88 Aligned_cols=169 Identities=27% Similarity=0.459 Sum_probs=140.2
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|.+.+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++++|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45777889999999999999864 478899999987666677889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcE
Q 047705 488 VLEYMPQGSLEKHLYSTN--------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIA 553 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~ 553 (585)
|||||++|+|.++++... ..+++.+++.|+.||++||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997642 35899999999999999999999 8999999999999999999999
Q ss_pred EEeeecccccccCCCCccccccccccccccCC
Q 047705 554 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 554 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+|||+|+..............+||+.||||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 229 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 229 (329)
T ss_dssp EECCCC----------------CCCCGGGCCH
T ss_pred EEcccccceeccCCCcceecCcccccccccCh
Confidence 99999999976544333344567899999998
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-36 Score=340.75 Aligned_cols=300 Identities=18% Similarity=0.252 Sum_probs=207.4
Q ss_pred CCccccCCCCCCEEecCCCcCCC------------------cCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCc
Q 047705 26 VPVAIFNVSTLKLLGLQDNSLSG------------------SLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLT 87 (585)
Q Consensus 26 ~~~~~~~l~~L~~L~L~~n~l~~------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 87 (585)
+|..|+++++|++|+|++|.|++ .++.+.|..+++|++|+|++|++...-. ..|..+++|+
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP-~~l~~L~~L~ 518 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLP-DFLYDLPELQ 518 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCC-GGGGGCSSCC
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccCh-HHHhCCCCCC
Confidence 67788888888888888888887 3444434468888888888887654322 6788888888
Q ss_pred EEEccCCC-Ccc-cCCcchhhccc------ccccEEEeecCcceecCCc--cccCCCCccEEEeeCCccccccchhhhCC
Q 047705 88 VIGLSNNP-LDG-ILPKTSIGNLS------HSLEDFQMHNCNVTGDIPE--EIGNLTNLITIDLGGNKLNGSILITLSKL 157 (585)
Q Consensus 88 ~L~Ls~N~-l~~-~~~~~~~~~~~------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 157 (585)
+|+|++|+ +++ .+|. .++.++ ++|+.|+|++|+++ .+|. .|..+++|++|+|++|++. .+| .|..+
T Consensus 519 ~L~Ls~N~~lsg~~iP~-~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L 594 (876)
T 4ecn_A 519 SLNIACNRGISAAQLKA-DWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTN 594 (876)
T ss_dssp EEECTTCTTSCHHHHHH-HHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTT
T ss_pred EEECcCCCCcccccchH-HHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCC
Confidence 88888887 776 5554 344444 23888888888888 6676 7888888888888888888 555 78888
Q ss_pred CCCceEEccCCCCCccCcccccCCCC-CcEEEcCCCcccccCcccccCccc--chhhcCCCCCC---CC---ccCC--CC
Q 047705 158 QKLQGLVLDDNKLEGSIPDDICRLVE-LYKLELGGNKLSRSIPACFNNLIA--LRILSLGSNDP---LP---LEIG--NL 226 (585)
Q Consensus 158 ~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~l~~n~~---~~---~~~~--~l 226 (585)
++|+.|+|++|+++ .+|..+..+++ |++|+|++|.++ .+|..+..++. |+.|++++|.. .| ..+. .+
T Consensus 595 ~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~ 672 (876)
T 4ecn_A 595 VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKG 672 (876)
T ss_dssp SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCC
T ss_pred CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccC
Confidence 88888888888888 67777888887 888888888887 56776666543 88888888762 12 1122 33
Q ss_pred CCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccC-------cCCCCEEeCCCCccCccCChhhc--c
Q 047705 227 KVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGN-------LISLKFLNLSNNNLSGAIPASLE--K 297 (585)
Q Consensus 227 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-------l~~L~~L~l~~N~l~~~~~~~~~--~ 297 (585)
++|+.|++++|.++.+.+..+..+++|+.|+|++|+++.+.+..+.. +++|+.|+|++|+|+ .+|..+. .
T Consensus 673 ~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 673 INASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp CCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred CCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 46777777777777433333446777777777777777332223322 226777777777777 5566665 6
Q ss_pred CCccceEEeecCcCeeeCCCCCCCCCCCccccCCCC
Q 047705 298 LSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 333 (585)
Q Consensus 298 l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 333 (585)
+++|+.|+|++|.+++.++....+..++.+++.+|+
T Consensus 752 l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp CTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred CCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 777777777777777643334455566666666544
No 35
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.6e-37 Score=299.51 Aligned_cols=166 Identities=24% Similarity=0.412 Sum_probs=133.5
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
..++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 3478999999999999999999875 79999999997542 2345678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||| +|+|.+++.+.. .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 91 vmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99999 679999998765 7999999999999999999999 999999999999999999999999999999865322
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 166 ---~~~~~~~GT~~Y~AP 180 (275)
T 3hyh_A 166 ---NFLKTSCGSPNYAAP 180 (275)
T ss_dssp ------------CTTSCH
T ss_pred ---CccCCeeECcccCCh
Confidence 223457899999998
No 36
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.2e-36 Score=326.49 Aligned_cols=312 Identities=21% Similarity=0.217 Sum_probs=267.9
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCc
Q 047705 8 NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLT 87 (585)
Q Consensus 8 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 87 (585)
.+.+++.|++++|.++.+.+..|.++++|++|+|++|.|++.++ ..+..+++|++|+|++|.++.++. ..|..+++|+
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~ 126 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPP-HVFQNVPLLT 126 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCT-TTTTTCTTCC
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCH-HHHcCCCCCC
Confidence 45889999999999987777788999999999999999985444 345689999999999999999986 7899999999
Q ss_pred EEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC
Q 047705 88 VIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167 (585)
Q Consensus 88 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 167 (585)
+|+|++|.++++.+. .++++++ |++|+|++|.+++..|..|..+++|++|+|++|.+.+.. +..+++|+.|++++
T Consensus 127 ~L~L~~n~l~~l~~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 127 VLVLERNDLSSLPRG-IFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSY 201 (597)
T ss_dssp EEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCS
T ss_pred EEEeeCCCCCCCCHH-HhccCCC-CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhccc
Confidence 999999999866554 5677776 999999999999999999999999999999999999653 56688999999999
Q ss_pred CCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC-CCCccCCCCCCCcEEEccCCcccccCCcc
Q 047705 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND-PLPLEIGNLKVLVGIDFSMNNFSGIIPKE 246 (585)
Q Consensus 168 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 246 (585)
|.+++. ...++|+.|++++|.++...+.. .++|+.|+|++|. ..+..+..+++|+.|++++|.+++..|..
T Consensus 202 n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 273 (597)
T 3oja_B 202 NLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHP 273 (597)
T ss_dssp SCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred Cccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHH
Confidence 998843 44568999999999998654433 3689999999998 55567889999999999999999999999
Q ss_pred cCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCCCc
Q 047705 247 IGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSA 326 (585)
Q Consensus 247 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~ 326 (585)
|.++++|+.|+|++|.++++ |..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.. ...+..+..
T Consensus 274 ~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~ 349 (597)
T 3oja_B 274 FVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKN 349 (597)
T ss_dssp GTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSE
T ss_pred hcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCE
Confidence 99999999999999999974 666778899999999999999 56777888999999999999998653 345678888
Q ss_pred cccCCCCcccCC
Q 047705 327 ESFEGNELLCGS 338 (585)
Q Consensus 327 ~~~~~n~~~c~~ 338 (585)
+++.+|++.|+.
T Consensus 350 L~l~~N~~~~~~ 361 (597)
T 3oja_B 350 LTLSHNDWDCNS 361 (597)
T ss_dssp EECCSSCEEHHH
T ss_pred EEeeCCCCCChh
Confidence 999999998864
No 37
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.6e-35 Score=301.90 Aligned_cols=305 Identities=23% Similarity=0.334 Sum_probs=264.3
Q ss_pred ccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCC
Q 047705 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKS 85 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 85 (585)
+..+++|++|++++|.++.. + .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.++.++ .|..+++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~~~---~~~~l~~ 111 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITDIS---ALQNLTN 111 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCG---GGTTCTT
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh---hhcCCcCCEEEccCCcccCch---HHcCCCc
Confidence 45789999999999999743 3 49999999999999999985443 558999999999999999974 5899999
Q ss_pred CcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEc
Q 047705 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVL 165 (585)
Q Consensus 86 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 165 (585)
|++|++++|++.++.+ +..++. |++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|++|++
T Consensus 112 L~~L~l~~n~i~~~~~---~~~l~~-L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 112 LRELYLNEDNISDISP---LANLTK-MYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp CSEEECTTSCCCCCGG---GTTCTT-CCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CCEEECcCCcccCchh---hccCCc-eeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 9999999999986643 566666 99999999976655544 8999999999999999987655 889999999999
Q ss_pred cCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCC-CCccCCCCCCCcEEEccCCcccccCC
Q 047705 166 DDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDP-LPLEIGNLKVLVGIDFSMNNFSGIIP 244 (585)
Q Consensus 166 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~-~~~~~~~l~~L~~L~ls~N~l~~~~~ 244 (585)
++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.. ....+..+++|+.|++++|.+++.
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-- 258 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDI-- 258 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCC--
Confidence 9999996544 8899999999999999986544 88999999999999982 222388999999999999999964
Q ss_pred cccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCC
Q 047705 245 KEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNF 324 (585)
Q Consensus 245 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~ 324 (585)
..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+..+..+++|++|++++|++++..| ...+..+
T Consensus 259 ~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L 335 (347)
T 4fmz_A 259 NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKM 335 (347)
T ss_dssp GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTC
T ss_pred hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhcc
Confidence 5689999999999999999975 468899999999999999999999999999999999999999998777 5667888
Q ss_pred CccccCCCCc
Q 047705 325 SAESFEGNEL 334 (585)
Q Consensus 325 ~~~~~~~n~~ 334 (585)
+.+++.+|++
T Consensus 336 ~~L~l~~N~i 345 (347)
T 4fmz_A 336 DSADFANQVI 345 (347)
T ss_dssp SEESSSCC--
T ss_pred ceeehhhhcc
Confidence 8899998875
No 38
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.5e-36 Score=311.12 Aligned_cols=315 Identities=21% Similarity=0.212 Sum_probs=268.0
Q ss_pred CCcc-ccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 2 IPLE-IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 2 ~p~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+|.. |+.+++|++|+|++|+++...+..|..+++|++|+|++|.+++.++ ..+..+++|++|+|++|+++.+|. ..|
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~-~~~ 137 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPP-HVFQNVPLLTVLVLERNDLSSLPR-GIF 137 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCT-TTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCH-HHhcCCCCCCEEECCCCccCcCCH-HHh
Confidence 4554 6889999999999999998888899999999999999999995544 445689999999999999999986 678
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 160 (585)
..+++|++|+|++|+++++.+. .++.++. |++|++++|.+++. .+..+++|+.|++++|.+.+. ...++|
T Consensus 138 ~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L 207 (390)
T 3o6n_A 138 HNTPKLTTLSMSNNNLERIEDD-TFQATTS-LQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAV 207 (390)
T ss_dssp TTCTTCCEEECCSSCCCBCCTT-TTSSCTT-CCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSC
T ss_pred cCCCCCcEEECCCCccCccChh-hccCCCC-CCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcc
Confidence 9999999999999999887766 5777776 99999999999875 366789999999999999853 345689
Q ss_pred ceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCC
Q 047705 161 QGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMN 237 (585)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N 237 (585)
++|++++|.++.. |.. ..++|++|++++|.+++. ..+..+++|+.|++++|. ..|..+..+++|+.|++++|
T Consensus 208 ~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 282 (390)
T 3o6n_A 208 EELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282 (390)
T ss_dssp SEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS
T ss_pred eEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCC
Confidence 9999999999965 332 357899999999999864 578999999999999998 45678999999999999999
Q ss_pred cccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC
Q 047705 238 NFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 238 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
++++. +..+..+++|+.|++++|++++ +|..+..+++|+.|++++|++++. + +..+++|+.|++++|+|.|.+..
T Consensus 283 ~l~~~-~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~ 357 (390)
T 3o6n_A 283 RLVAL-NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR 357 (390)
T ss_dssp CCCEE-ECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH
T ss_pred cCccc-CcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH
Confidence 99964 5567889999999999999995 566788899999999999999865 3 67789999999999999997654
Q ss_pred CCCCCCCCccccCCCCcccCCC
Q 047705 318 GGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 318 ~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
. .+..+....+.+++..|..+
T Consensus 358 ~-~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 358 A-LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp H-HTTTCCTTTBCCCCSCCCTT
T ss_pred H-HHHHHHhhcccccCceeccc
Confidence 2 33445555667777778765
No 39
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-36 Score=298.31 Aligned_cols=161 Identities=27% Similarity=0.390 Sum_probs=139.8
Q ss_pred CccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeec----CCeEEEEE
Q 047705 417 SENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKGLVL 489 (585)
Q Consensus 417 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 489 (585)
++.+.||+|+||+||+|++. +++.||+|++... .....+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56778999999999999876 6899999999754 23456789999999999999999999999865 35689999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeC-CCCcEEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~ 566 (585)
|||+||+|.+++.+.. .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998754 6899999999999999999999 777 99999999999998 579999999999986422
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 185 ----~~~~~~~GTp~YmAP 199 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAP 199 (290)
T ss_dssp ----TSBEESCSSCCCCCG
T ss_pred ----CccCCcccCccccCH
Confidence 223457899999999
No 40
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.9e-37 Score=307.08 Aligned_cols=164 Identities=26% Similarity=0.339 Sum_probs=141.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.+.|++.+.||+|+||+||+|+++ +|+.||||+++.... ..+|+.+++.++|||||+++++|.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 456888899999999999999976 799999999986432 24699999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC-cEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM-IAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+||+|.+++++.+ .+++..+..++.||+.||+||| +++||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999998764 6899999999999999999999 99999999999999999887 6999999999976533221
Q ss_pred ---cccccccccccccCC
Q 047705 571 ---MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ---~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 208 ~~~~~~~~~~GT~~YmAP 225 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAP 225 (336)
T ss_dssp ------CCCCCCGGGCCH
T ss_pred cceecCCccccCccccCH
Confidence 122346899999998
No 41
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.3e-36 Score=324.33 Aligned_cols=191 Identities=21% Similarity=0.208 Sum_probs=164.6
Q ss_pred CCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 1 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+||..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++.++ ..+..+++|++|+|++|+++.++. ..|
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~-~~~ 94 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG-DAFYSLGSLEHLDLSDNHLSSLSS-SWF 94 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSCCCSCCH-HHH
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh-hhccccccCCEEECCCCccCccCH-HHh
Confidence 4677654 799999999999998889999999999999999999995544 445689999999999999999985 679
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCc-ceecCCccccCCCCccEEEeeCCccccccchhhhCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCN-VTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQK 159 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 159 (585)
..+++|++|+|++|++++......++++++ |++|++++|. +....+..|..+++|++|++++|++.+..|..|..+++
T Consensus 95 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~-L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 173 (549)
T 2z81_A 95 GPLSSLKYLNLMGNPYQTLGVTSLFPNLTN-LQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRD 173 (549)
T ss_dssp TTCTTCCEEECTTCCCSSSCSSCSCTTCTT-CCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred ccCCCCcEEECCCCcccccchhhhhhccCC-ccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcccc
Confidence 999999999999999987533336778876 9999999999 55555578999999999999999999999999999999
Q ss_pred CceEEccCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 160 LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
|++|+++.|.+....+..+..+++|++|++++|.+++
T Consensus 174 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 174 IHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred CceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 9999999999984444344568888888888888875
No 42
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.3e-37 Score=304.00 Aligned_cols=169 Identities=24% Similarity=0.397 Sum_probs=145.2
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
+++++.+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|..++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34667889999999999999863 46789999987542 334578999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC
Q 047705 487 LVLEYMPQGSLEKHLYSTN---------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM 551 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~ 551 (585)
+|||||++|+|.+++.... ..+++.++..++.||++||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996532 35889999999999999999999 89999999999999999999
Q ss_pred cEEEeeecccccccCCCCccccccccccccccCC
Q 047705 552 IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 552 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.+||+|||+|+..............+||+.||||
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 216 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCH
Confidence 9999999999976544333344567899999998
No 43
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.5e-37 Score=306.41 Aligned_cols=166 Identities=28% Similarity=0.378 Sum_probs=139.1
Q ss_pred CCCCccceecccCceEEEEEEeC----CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||+++++|.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999863 46889999997542 2233567889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|||||+||+|.+++.+.. .+++..+..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998764 6899999999999999999999 999999999999999999999999999999865332
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ......+||+.||||
T Consensus 180 ~--~~~~~~~GT~~YmAP 195 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAP 195 (304)
T ss_dssp ---CCCCSCCCCGGGCCH
T ss_pred C--ccccccccCcccCCH
Confidence 2 223457899999998
No 44
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.8e-36 Score=299.98 Aligned_cols=169 Identities=24% Similarity=0.425 Sum_probs=134.2
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC--------
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-------- 483 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 483 (585)
++|++.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|++++++++|||||+++++|...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45899999999999999999876 78999999997543 344577899999999999999999999986543
Q ss_pred ----eEEEEEEccCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEee
Q 047705 484 ----FKGLVLEYMPQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSD 557 (585)
Q Consensus 484 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~D 557 (585)
..|+|||||+||+|.+++..... ..++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999987543 3456668899999999999999 89999999999999999999999999
Q ss_pred ecccccccCCCCc----------cccccccccccccCC
Q 047705 558 FGIAKLLIGEDQS----------MTQTQTLATIGYMAP 585 (585)
Q Consensus 558 fg~a~~~~~~~~~----------~~~~~~~gt~~y~aP 585 (585)
||+|+........ ...+..+||+.||||
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP 199 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP 199 (299)
T ss_dssp CCCC--------------------------CCCTTSCH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCH
Confidence 9999876432211 112456899999998
No 45
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6e-35 Score=297.74 Aligned_cols=285 Identities=27% Similarity=0.384 Sum_probs=249.5
Q ss_pred cccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCC
Q 047705 5 EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCK 84 (585)
Q Consensus 5 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 84 (585)
.++.+++|++|+|++|+++...+ +..+++|++|+|++|.+++ ++. +..+++|++|+|++|+++.++. +..++
T Consensus 61 ~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~l~~n~i~~~~~---~~~l~ 132 (347)
T 4fmz_A 61 GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-ISA--LQNLTNLRELYLNEDNISDISP---LANLT 132 (347)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCSEEECTTSCCCCCGG---GTTCT
T ss_pred hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-chH--HcCCCcCCEEECcCCcccCchh---hccCC
Confidence 48899999999999999985544 9999999999999999984 443 5589999999999999999863 88999
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV 164 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 164 (585)
+|++|++++|......+. +..++. |++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|+
T Consensus 133 ~L~~L~l~~n~~~~~~~~--~~~l~~-L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 205 (347)
T 4fmz_A 133 KMYSLNLGANHNLSDLSP--LSNMTG-LNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFT 205 (347)
T ss_dssp TCCEEECTTCTTCCCCGG--GTTCTT-CCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred ceeEEECCCCCCcccccc--hhhCCC-CcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceee
Confidence 999999999976554443 667776 9999999999986655 8899999999999999997655 88999999999
Q ss_pred ccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC-CCCccCCCCCCCcEEEccCCcccccC
Q 047705 165 LDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND-PLPLEIGNLKVLVGIDFSMNNFSGII 243 (585)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~~L~~L~ls~N~l~~~~ 243 (585)
+++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|. .....+..+++|+.|++++|.+++.
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI- 280 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC-
Confidence 99999996655 8899999999999999986544 8999999999999998 3335688999999999999999975
Q ss_pred CcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCe
Q 047705 244 PKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLE 312 (585)
Q Consensus 244 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 312 (585)
..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 468899999999999999999888999999999999999999997766 889999999999999985
No 46
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-35 Score=323.27 Aligned_cols=315 Identities=21% Similarity=0.194 Sum_probs=270.2
Q ss_pred CCc-cccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 2 IPL-EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 2 ~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+|. .|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.|++.++ ..+..+++|++|+|++|.|+.+|. ..|
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~-~~~ 143 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPP-HVFQNVPLLTVLVLERNDLSSLPR-GIF 143 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCT-TTT
T ss_pred cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCH-HHHcCCCCCCEEEeeCCCCCCCCH-HHh
Confidence 344 36889999999999999999888999999999999999999996554 445689999999999999999986 778
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 160 (585)
..+++|++|+|++|.++++.|. .++.++. |++|++++|.+++.. +..+++|+.|++++|.+.+. ...++|
T Consensus 144 ~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L 213 (597)
T 3oja_B 144 HNTPKLTTLSMSNNNLERIEDD-TFQATTS-LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAV 213 (597)
T ss_dssp TTCTTCCEEECCSSCCCBCCTT-TTTTCTT-CCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTC
T ss_pred ccCCCCCEEEeeCCcCCCCChh-hhhcCCc-CcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchh
Confidence 9999999999999999988776 6777876 999999999998763 56689999999999999853 345689
Q ss_pred ceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCC
Q 047705 161 QGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMN 237 (585)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N 237 (585)
+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|. ..|..+..+++|+.|+|++|
T Consensus 214 ~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 214 EELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp SEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred heeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 99999999999554432 3689999999999986 4779999999999999998 55778999999999999999
Q ss_pred cccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC
Q 047705 238 NFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 238 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
.++++ |..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++.. +..+++|+.|++++|+|.|.+..
T Consensus 289 ~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~ 363 (597)
T 3oja_B 289 RLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR 363 (597)
T ss_dssp CCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH
T ss_pred CCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH
Confidence 99974 666788999999999999999 46777889999999999999998653 67788999999999999998754
Q ss_pred CCCCCCCCccccCCCCcccCCC
Q 047705 318 GGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 318 ~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
. .+..+....+.++...|+.+
T Consensus 364 ~-~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 364 A-LFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp H-HTTTCCTTTBCCCCCCCCTT
T ss_pred H-HHHHHhhhccccccccCCcc
Confidence 2 34455555677888888764
No 47
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-34 Score=307.91 Aligned_cols=308 Identities=26% Similarity=0.427 Sum_probs=170.7
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
+| .+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++..+ +..+++|++|+|++|+++.++. +.
T Consensus 61 l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~---~~ 131 (466)
T 1o6v_A 61 ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLFNNQITDIDP---LK 131 (466)
T ss_dssp CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG---GT
T ss_pred Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh---hcCCCCCCEEECCCCCCCCChH---Hc
Confidence 44 36778888888888888875543 8888888888888888875444 4578888888888888888753 77
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCc
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQ 161 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 161 (585)
.+++|++|++++|.+.++. .++.++. |+.|+++ |.+.+.. .+..+++|++|++++|.+.+. ..+..+++|+
T Consensus 132 ~l~~L~~L~l~~n~l~~~~---~~~~l~~-L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 202 (466)
T 1o6v_A 132 NLTNLNRLELSSNTISDIS---ALSGLTS-LQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLE 202 (466)
T ss_dssp TCTTCSEEEEEEEEECCCG---GGTTCTT-CSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred CCCCCCEEECCCCccCCCh---hhccCCc-ccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCC
Confidence 8888888888888876542 2333333 4444443 2222211 144455555555555554432 1244445555
Q ss_pred eEEccCCCCCccCc--------------------ccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC-CCC
Q 047705 162 GLVLDDNKLEGSIP--------------------DDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND-PLP 220 (585)
Q Consensus 162 ~L~L~~N~l~~~~~--------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~ 220 (585)
+|++++|.+++..| +.+..+++|++|++++|.+++..+ +..+++|+.|++++|. ...
T Consensus 203 ~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 280 (466)
T 1o6v_A 203 SLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280 (466)
T ss_dssp EEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC
T ss_pred EEEecCCcccccccccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc
Confidence 55555555443332 234444455555555555543322 4445555555555554 111
Q ss_pred ccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCc
Q 047705 221 LEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSY 300 (585)
Q Consensus 221 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 300 (585)
..+..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 354 (466)
T 1o6v_A 281 SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTN 354 (466)
T ss_dssp GGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred ccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCC
Confidence 114445555555555555554322 4455555555555555554433 44555555555555555543 24455555
Q ss_pred cceEEeecCcCeeeCCCCCCCCCCCccccCCCCccc
Q 047705 301 LEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLC 336 (585)
Q Consensus 301 L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 336 (585)
|+.|++++|++++..| ...+..++.+++.+|++..
T Consensus 355 L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 355 INWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEEC
T ss_pred CCEEeCCCCccCccch-hhcCCCCCEEeccCCcccC
Confidence 5555555555555444 3344445555555555443
No 48
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.3e-35 Score=295.90 Aligned_cols=255 Identities=33% Similarity=0.555 Sum_probs=201.5
Q ss_pred CCccEEEccCCCCCC---CccCccccCCCCCcEEEccC-CCCcccCCcchhhcccccccEEEeecCcceecCCccccCCC
Q 047705 59 PNLEELVLWGNNFSE---LNFLSSLSNCKSLTVIGLSN-NPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLT 134 (585)
Q Consensus 59 ~~L~~L~L~~n~l~~---~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 134 (585)
.++++|+|++|.++. +| ..|..+++|++|+|++ |.+.+..|. .+++++. |++|++++|++++.+|..|..++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~--~~l~~l~~L~~L~L~~~n~l~~~~p~-~l~~l~~-L~~L~Ls~n~l~~~~p~~~~~l~ 125 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIP--SSLANLPYLNFLYIGGINNLVGPIPP-AIAKLTQ-LHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CCEEEEEEECCCCSSCEECC--GGGGGCTTCSEEEEEEETTEESCCCG-GGGGCTT-CSEEEEEEECCEEECCGGGGGCT
T ss_pred ceEEEEECCCCCccCCcccC--hhHhCCCCCCeeeCCCCCcccccCCh-hHhcCCC-CCEEECcCCeeCCcCCHHHhCCC
Confidence 467777777777764 44 5677777777777774 777666665 4566665 77777777777777777777777
Q ss_pred CccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCC-CCcEEEcCCCcccccCcccccCcccchhhcC
Q 047705 135 NLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLV-ELYKLELGGNKLSRSIPACFNNLIALRILSL 213 (585)
Q Consensus 135 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 213 (585)
+|++|+|++|.+.+..|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|.+++..|..|
T Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~----------- 194 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF----------- 194 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGG-----------
T ss_pred CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHH-----------
Confidence 777777777777766777777777777777777777766777777766 67777777777766555544
Q ss_pred CCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCCh
Q 047705 214 GSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPA 293 (585)
Q Consensus 214 ~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 293 (585)
..++ |+.|++++|.+++..|..|..+++|+.|++++|++++.+|. +..+++|+.|++++|++++.+|.
T Consensus 195 ----------~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 195 ----------ANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp ----------GGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred ----------hCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 3344 78888899999988999999999999999999999977665 78889999999999999999999
Q ss_pred hhccCCccceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCCC
Q 047705 294 SLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 294 ~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 340 (585)
.+..+++|++|++++|++++.+|....+..++.+++.+|++.|+.|.
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 99999999999999999999999887888899999999999999873
No 49
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.1e-34 Score=320.02 Aligned_cols=314 Identities=22% Similarity=0.255 Sum_probs=257.0
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+|+++++|++|||++|+|+++.+.+|.++++|++|+|++|+|+ .++...|..+++|++|+|++|+|+.++. ..|..
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~-~~~~~ 146 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLEN-FPIGH 146 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTT-CCCTT
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCCh-hhhhc
Confidence 457899999999999999998888888999999999999999998 4444455678889999999999888875 67888
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccc--------------------------------
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEI-------------------------------- 130 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-------------------------------- 130 (585)
+++|++|+|++|++++...+.+++.++. |++|++++|++++..+..|
T Consensus 147 L~~L~~L~Ls~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~ 225 (635)
T 4g8a_A 147 LKTLKELNVAHNLIQSFKLPEYFSNLTN-LEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR 225 (635)
T ss_dssp CTTCCEEECCSSCCCCCCCCGGGGGCTT-CCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCE
T ss_pred CcccCeeccccCccccCCCchhhccchh-hhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchh
Confidence 8888888888888876654446666665 7888777776654322111
Q ss_pred --------------------------------------------------------------------------------
Q 047705 131 -------------------------------------------------------------------------------- 130 (585)
Q Consensus 131 -------------------------------------------------------------------------------- 130 (585)
T Consensus 226 ~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 305 (635)
T 4g8a_A 226 LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCL 305 (635)
T ss_dssp EEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGG
T ss_pred hhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhh
Confidence
Q ss_pred --------------------------------------------------------------cCCCCccEEEeeCCcccc
Q 047705 131 --------------------------------------------------------------GNLTNLITIDLGGNKLNG 148 (585)
Q Consensus 131 --------------------------------------------------------------~~l~~L~~L~L~~N~l~~ 148 (585)
..+++|+.|++++|.+..
T Consensus 306 ~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~ 385 (635)
T 4g8a_A 306 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF 385 (635)
T ss_dssp TTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBE
T ss_pred cccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccc
Confidence 124567777777777653
Q ss_pred c--cch-----------------------hhhCCCCCceEEccCCCCCccCc-ccccCCCCCcEEEcCCCcccccCcccc
Q 047705 149 S--ILI-----------------------TLSKLQKLQGLVLDDNKLEGSIP-DDICRLVELYKLELGGNKLSRSIPACF 202 (585)
Q Consensus 149 ~--~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (585)
. .+. .|..+++|+.++++.|.+....+ ..|..+.+++.+++++|.+.+..+..+
T Consensus 386 ~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~ 465 (635)
T 4g8a_A 386 KGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 465 (635)
T ss_dssp EEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred ccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccccccccccccccccc
Confidence 2 222 34455666666666666554433 567889999999999999999999999
Q ss_pred cCcccchhhcCCCCC----CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCC
Q 047705 203 NNLIALRILSLGSND----PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLK 278 (585)
Q Consensus 203 ~~l~~L~~L~l~~n~----~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 278 (585)
..+++|+.|++++|. ..|..+..+++|+.|+|++|+++++.|..|.++++|++|+|++|+++++.|..|..+++|+
T Consensus 466 ~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~ 545 (635)
T 4g8a_A 466 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545 (635)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCC
T ss_pred ccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCC
Confidence 999999999999996 4677899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccCccCChhhccC-CccceEEeecCcCeeeCCCCC
Q 047705 279 FLNLSNNNLSGAIPASLEKL-SYLEDLNLSFNKLEGEIPRGG 319 (585)
Q Consensus 279 ~L~l~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~~~ 319 (585)
+|+|++|+|++..|..+..+ ++|++|+|++|+|.|+|...+
T Consensus 546 ~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~ 587 (635)
T 4g8a_A 546 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS 587 (635)
T ss_dssp EEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHH
T ss_pred EEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHH
Confidence 99999999999999999988 689999999999999998543
No 50
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.3e-34 Score=290.30 Aligned_cols=285 Identities=25% Similarity=0.281 Sum_probs=205.3
Q ss_pred CCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEE
Q 047705 11 NLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIG 90 (585)
Q Consensus 11 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 90 (585)
+++.+++++|.++ .+|..+. ++|++|+|++|.|++..+ ..+..+++|++|+|++|+++.++. ..|..+++|++|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRK-DDFKGLQHLYALVLVNNKISKIHE-KAFSPLRKLQKLY 108 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECG-GGSTTCTTCCEEE
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCH-hHhhCCCCCcEEECCCCccCccCH-hHhhCcCCCCEEE
Confidence 6888888888876 5566553 578888888888874433 334578888888888888888754 6788888888888
Q ss_pred ccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCcccc--ccchhhhCCCCCceEEccCC
Q 047705 91 LSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNG--SILITLSKLQKLQGLVLDDN 168 (585)
Q Consensus 91 Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N 168 (585)
|++|+++.+.+. .. .+|++|++++|.+++..+..|..+++|++|++++|.++. ..+..|..+ +|++|++++|
T Consensus 109 L~~n~l~~l~~~-~~----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 109 ISKNHLVEIPPN-LP----SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp CCSSCCCSCCSS-CC----TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred CCCCcCCccCcc-cc----ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 888888754333 21 348888888888887777778888888888888888853 566777777 8888888888
Q ss_pred CCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCc
Q 047705 169 KLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPK 245 (585)
Q Consensus 169 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 245 (585)
++++ +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|. ..+..+..+++|+.|++++|+++ .+|.
T Consensus 183 ~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 183 KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 8875 443333 678888888888887776777788888888888776 33335677777788888888777 4566
Q ss_pred ccCCCCCCcEEeecccCcccccCccccCc------CCCCEEeCCCCccC--ccCChhhccCCccceEEeecCc
Q 047705 246 EIGGLKNLEYLFLGYNRLQGLIPDSFGNL------ISLKFLNLSNNNLS--GAIPASLEKLSYLEDLNLSFNK 310 (585)
Q Consensus 246 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~l~l~~N~ 310 (585)
.+..+++|+.|++++|++++..+..|..+ +.|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 259 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 259 GLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 67777778888888887777666666543 56777777777776 5666677777777777777764
No 51
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-33 Score=285.78 Aligned_cols=287 Identities=22% Similarity=0.271 Sum_probs=215.7
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+++.++++++.++ .+|..+. ++|++|+|++|.|++. +...+..+++|++|+|++|+++.+.. ..|..+++|++|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L 105 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEI-KDGDFKNLKNLHTLILINNKISKISP-GAFAPLVKLERL 105 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEE
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEe-ChhhhccCCCCCEEECCCCcCCeeCH-HHhcCCCCCCEE
Confidence 47888888888887 5566554 5888899999988844 44345578889999999998888854 778888899999
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCcccc--ccchhhhCCCCCceEEccC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNG--SILITLSKLQKLQGLVLDD 167 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~ 167 (585)
+|++|+++.+... .+ .+|++|++++|.+++..+..|..+++|++|++++|.+.. ..+..|.++++|++|++++
T Consensus 106 ~Ls~n~l~~l~~~-~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 106 YLSKNQLKELPEK-MP----KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp ECCSSCCSBCCSS-CC----TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred ECCCCcCCccChh-hc----ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 9999988754332 21 358888888888888877788888888888888888854 6677788888888888888
Q ss_pred CCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCC
Q 047705 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIP 244 (585)
Q Consensus 168 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~ 244 (585)
|.++. +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|. ..+..+..+++|+.|++++|.++ .+|
T Consensus 181 n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 256 (330)
T 1xku_A 181 TNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVP 256 (330)
T ss_dssp SCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCC
T ss_pred Ccccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCC
Confidence 88884 444333 788888888888887777788888888888888886 33345777778888888888887 566
Q ss_pred cccCCCCCCcEEeecccCcccccCccccCc------CCCCEEeCCCCccCc--cCChhhccCCccceEEeecCc
Q 047705 245 KEIGGLKNLEYLFLGYNRLQGLIPDSFGNL------ISLKFLNLSNNNLSG--AIPASLEKLSYLEDLNLSFNK 310 (585)
Q Consensus 245 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~N~ 310 (585)
..+..+++|++|++++|+++++.+..|... +.|+.|++++|++.. ..|..|..+.+++.+++++|+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 667777888888888888877666666433 567778888887753 555677777778888887774
No 52
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-35 Score=291.52 Aligned_cols=168 Identities=27% Similarity=0.401 Sum_probs=135.3
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC----eEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE----FKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 489 (585)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...++.|+..+.+++|||||++++++..++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3577889999999999999998 5889999999755332 123345666667889999999999997653 579999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG-----CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
|||++|+|.++++.. .+++..+.+++.|+++||+|||+. +.++||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999875 588999999999999999999932 1239999999999999999999999999999876
Q ss_pred cCCCCcc--ccccccccccccCC
Q 047705 565 IGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~--~~~~~~gt~~y~aP 585 (585)
....... .....+||++||||
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAP 181 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCH
T ss_pred cCCCCceeeecccccccccccCH
Confidence 5433221 22356899999998
No 53
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-33 Score=299.69 Aligned_cols=290 Identities=30% Similarity=0.442 Sum_probs=248.8
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccC----
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFL---- 77 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---- 77 (585)
+|. ++++++|++|+|++|++++..+ +.++++|++|+|++|.+++..+ +..+++|++|+|++|.++.++..
T Consensus 83 ~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~l~ 156 (466)
T 1o6v_A 83 ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP---LKNLTNLNRLELSSNTISDISALSGLT 156 (466)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG---GTTCTTCSEEEEEEEEECCCGGGTTCT
T ss_pred chh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH---HcCCCCCCEEECCCCccCCChhhccCC
Confidence 444 8899999999999999986554 9999999999999999985443 45789999999999998876531
Q ss_pred --------------ccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeC
Q 047705 78 --------------SSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGG 143 (585)
Q Consensus 78 --------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 143 (585)
..+..+++|++|++++|.+.++. .+..++. |++|++++|.+++..+ ++.+++|++|++++
T Consensus 157 ~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~l~~l~~-L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 230 (466)
T 1o6v_A 157 SLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS---VLAKLTN-LESLIATNNQISDITP--LGILTNLDELSLNG 230 (466)
T ss_dssp TCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG---GGGGCTT-CSEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred cccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh---hhccCCC-CCEEEecCCccccccc--ccccCCCCEEECCC
Confidence 12567788999999999987652 3566666 9999999999987765 77899999999999
Q ss_pred CccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC-CCCcc
Q 047705 144 NKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND-PLPLE 222 (585)
Q Consensus 144 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~ 222 (585)
|++.+. ..+..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|. .....
T Consensus 231 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 231 NQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred CCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 999874 468899999999999999997655 8899999999999999996544 8899999999999998 22233
Q ss_pred CCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccc
Q 047705 223 IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLE 302 (585)
Q Consensus 223 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 302 (585)
+..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+
T Consensus 305 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 378 (466)
T 1o6v_A 305 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378 (466)
T ss_dssp GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCC
T ss_pred hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCC
Confidence 8899999999999999998765 78999999999999999976 578999999999999999998877 88999999
Q ss_pred eEEeecCcCeeeC
Q 047705 303 DLNLSFNKLEGEI 315 (585)
Q Consensus 303 ~l~l~~N~l~~~~ 315 (585)
.|++++|+|++.+
T Consensus 379 ~L~l~~n~~~~~p 391 (466)
T 1o6v_A 379 QLGLNDQAWTNAP 391 (466)
T ss_dssp EEECCCEEEECCC
T ss_pred EEeccCCcccCCc
Confidence 9999999999743
No 54
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.2e-35 Score=296.02 Aligned_cols=179 Identities=24% Similarity=0.387 Sum_probs=151.4
Q ss_pred cCHHHHHHhcCCCCccceecccCceEEEEEEeC------CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCC-CcceeE
Q 047705 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRH-RNLIKV 475 (585)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l 475 (585)
++..++....++|++.+.||+|+||+||+|++. .++.||||.++... ....+.|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 445566666789999999999999999999753 23679999997543 3345779999999999976 899999
Q ss_pred EeeeecC-CeEEEEEEccCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcC
Q 047705 476 ISSCSNE-EFKGLVLEYMPQGSLEKHLYSTN---------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCD 539 (585)
Q Consensus 476 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~d 539 (585)
+++|..+ +..|+|||||++|+|.++++... ..+++.++..++.||++||+||| +++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 9998664 57899999999999999997532 24789999999999999999999 89999999
Q ss_pred CCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 540 LKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 540 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||+|||+++++.+||+|||+|+.+............+||+.||||
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 256 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence 9999999999999999999999976544443444567899999998
No 55
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-34 Score=288.95 Aligned_cols=255 Identities=26% Similarity=0.371 Sum_probs=221.1
Q ss_pred CCCCEEecCCCcCCC--cCCccccCCCCCccEEEccC-CCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccc
Q 047705 34 STLKLLGLQDNSLSG--SLSSITDVRLPNLEELVLWG-NNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSH 110 (585)
Q Consensus 34 ~~L~~L~L~~n~l~~--~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 110 (585)
.++++|+|++|.+++ .++. .+..+++|++|+|++ |.+..... ..|..+++|++|+|++|++++..|. .++.+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L~L~~~n~l~~~~p-~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLVGPIP-PAIAKLTQLHYLYITHTNVSGAIPD-FLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEESCCC-GGGGGCTTCSEEEEEEECCEEECCG-GGGGCTT
T ss_pred ceEEEEECCCCCccCCcccCh-hHhCCCCCCeeeCCCCCcccccCC-hhHhcCCCCCEEECcCCeeCCcCCH-HHhCCCC
Confidence 589999999999997 5554 345799999999995 88875432 7799999999999999999988887 6778876
Q ss_pred cccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCC-CCceEEccCCCCCccCcccccCCCCCcEEEc
Q 047705 111 SLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQ-KLQGLVLDDNKLEGSIPDDICRLVELYKLEL 189 (585)
Q Consensus 111 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 189 (585)
|++|++++|.+++.+|..|..+++|++|+|++|++.+..|..|..++ +|++|++++|++++.+|..+..+. |++|++
T Consensus 127 -L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~L 204 (313)
T 1ogq_A 127 -LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDL 204 (313)
T ss_dssp -CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEEC
T ss_pred -CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEEC
Confidence 99999999999999999999999999999999999999999999998 999999999999999999999987 999999
Q ss_pred CCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCc
Q 047705 190 GGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPD 269 (585)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 269 (585)
++|.+++..|..|.. +++|+.|++++|.+++..+. +..+++|++|++++|++++.+|.
T Consensus 205 s~N~l~~~~~~~~~~---------------------l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 205 SRNMLEGDASVLFGS---------------------DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp CSSEEEECCGGGCCT---------------------TSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred cCCcccCcCCHHHhc---------------------CCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 999999877665544 45566667777788765555 77888999999999999988898
Q ss_pred cccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCC
Q 047705 270 SFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIP 316 (585)
Q Consensus 270 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 316 (585)
.+..+++|+.|++++|++++.+|.. ..+++|+.+++++|+..|..|
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred HHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence 8999999999999999999888875 788899999999998666544
No 56
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.6e-33 Score=282.48 Aligned_cols=273 Identities=22% Similarity=0.204 Sum_probs=236.4
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.|++..+. .+..+++|++|+|++|+++.+|. ..+
T Consensus 46 lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~l~~-~~~- 120 (330)
T 1xku_A 46 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPG-AFAPLVKLERLYLSKNQLKELPE-KMP- 120 (330)
T ss_dssp CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTT-TTTTCTTCCEEECCSSCCSBCCS-SCC-
T ss_pred cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHH-HhcCCCCCCEEECCCCcCCccCh-hhc-
Confidence 565543 6899999999999988888999999999999999999855443 34589999999999999999984 333
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCccee--cCCccccCCCCccEEEeeCCccccccchhhhCCCC
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTG--DIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQK 159 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 159 (585)
++|++|++++|+++++.+. .+..++. |++|++++|.++. ..+..|..+++|++|++++|.++.+... +. ++
T Consensus 121 --~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~-~~--~~ 193 (330)
T 1xku_A 121 --KTLQELRVHENEITKVRKS-VFNGLNQ-MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG-LP--PS 193 (330)
T ss_dssp --TTCCEEECCSSCCCBBCHH-HHTTCTT-CCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS-CC--TT
T ss_pred --ccccEEECCCCcccccCHh-HhcCCcc-ccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcc-cc--cc
Confidence 8999999999999876655 6777876 9999999999964 7788899999999999999999965443 32 79
Q ss_pred CceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcEEEccCC
Q 047705 160 LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMN 237 (585)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N 237 (585)
|++|++++|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|++++|. .+|..+..+++|+.|++++|
T Consensus 194 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N 273 (330)
T 1xku_A 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNN 273 (330)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSS
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCC
Confidence 9999999999999889999999999999999999998888899999999999999998 77778999999999999999
Q ss_pred cccccCCcccCCC------CCCcEEeecccCccc--ccCccccCcCCCCEEeCCCCc
Q 047705 238 NFSGIIPKEIGGL------KNLEYLFLGYNRLQG--LIPDSFGNLISLKFLNLSNNN 286 (585)
Q Consensus 238 ~l~~~~~~~~~~l------~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~ 286 (585)
+++++.+..|... +.|+.|++++|++.. +.|..|..+.+++.+++++|+
T Consensus 274 ~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 274 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 9998888888643 789999999999864 567889999999999999985
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.4e-33 Score=294.40 Aligned_cols=303 Identities=18% Similarity=0.156 Sum_probs=235.5
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|.+++++++|++|+|++|.+++. | .+..+++|++|+|++|.|++. + +..+++|++|+|++|+++.++ +..
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~---~~~l~~L~~L~Ls~N~l~~~~----~~~ 104 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D---LSQNTNLTYLACDSNKLTNLD----VTP 104 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSCCC----CTT
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c---cccCCCCCEEECcCCCCceee----cCC
Confidence 45678889999999999999864 4 799999999999999999854 3 457899999999999999874 778
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCce
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQG 162 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 162 (585)
+++|++|++++|+++++ + ++.++. |++|++++|++++. .++.+++|++|++++|+..+.. .+..+++|++
T Consensus 105 l~~L~~L~L~~N~l~~l-~---~~~l~~-L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKL-D---VSQNPL-LTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp CTTCCEEECCSSCCSCC-C---CTTCTT-CCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred CCcCCEEECCCCcCCee-c---CCCCCc-CCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 99999999999999875 2 556665 99999999999874 3788899999999999654444 4778899999
Q ss_pred EEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCccccc
Q 047705 163 LVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGI 242 (585)
Q Consensus 163 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~ 242 (585)
|++++|+++++ | +..+++|+.|++++|.+++. .+..+++|+.|++++|+.....+..+++|+.|++++|++++.
T Consensus 175 L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 175 LDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp EECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC
T ss_pred EECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCCc
Confidence 99999999864 3 77888999999999999864 378889999999999983333388888999999999999887
Q ss_pred CCcccCCCC-------CCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCCh--------hhccCCccceEEee
Q 047705 243 IPKEIGGLK-------NLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPA--------SLEKLSYLEDLNLS 307 (585)
Q Consensus 243 ~~~~~~~l~-------~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~~l~l~ 307 (585)
.+..+..+. +|+.|++++|++.+.+| +..+++|+.|++++|...+.+|. .+..+++|++|+++
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~ 326 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLN 326 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECC
Confidence 655555544 45666666666655554 45677888888888876555443 24556778888888
Q ss_pred cCcCeeeCCCCCCCCCCCccccCCCCcc
Q 047705 308 FNKLEGEIPRGGSFGNFSAESFEGNELL 335 (585)
Q Consensus 308 ~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 335 (585)
+|.+++. + ...+..++.+++.+|.+.
T Consensus 327 ~N~l~~l-~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 327 NTELTEL-D-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp TCCCSCC-C-CTTCTTCSEEECCSSCCC
T ss_pred CCccccc-c-cccCCcCcEEECCCCCCC
Confidence 8888774 3 455666777777777654
No 58
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3e-33 Score=283.24 Aligned_cols=272 Identities=22% Similarity=0.278 Sum_probs=236.6
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
+|..+. +++++|+|++|+++...|..|.++++|++|+|++|.|++..+ ..+..+++|++|+|++|+++.+|. ..+
T Consensus 48 ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~-~~~- 122 (332)
T 2ft3_A 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHE-KAFSPLRKLQKLYISKNHLVEIPP-NLP- 122 (332)
T ss_dssp CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECG-GGSTTCTTCCEEECCSSCCCSCCS-SCC-
T ss_pred cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCH-hHhhCcCCCCEEECCCCcCCccCc-ccc-
Confidence 566553 799999999999998888999999999999999999985544 445689999999999999999985 333
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcce--ecCCccccCCCCccEEEeeCCccccccchhhhCCCC
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVT--GDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQK 159 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 159 (585)
++|++|++++|+++++.+. .+..+++ |++|++++|.++ +..+..|..+ +|++|++++|+++++.. .+. ++
T Consensus 123 --~~L~~L~l~~n~i~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~-~~~--~~ 194 (332)
T 2ft3_A 123 --SSLVELRIHDNRIRKVPKG-VFSGLRN-MNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPK-DLP--ET 194 (332)
T ss_dssp --TTCCEEECCSSCCCCCCSG-GGSSCSS-CCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCS-SSC--SS
T ss_pred --ccCCEEECCCCccCccCHh-HhCCCcc-CCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCc-ccc--CC
Confidence 8999999999999876655 6777876 999999999996 4778888888 99999999999997544 332 79
Q ss_pred CceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcEEEccCC
Q 047705 160 LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMN 237 (585)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N 237 (585)
|++|++++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|. .+|..+..+++|+.|++++|
T Consensus 195 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N 274 (332)
T 2ft3_A 195 LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTN 274 (332)
T ss_dssp CSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSS
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCC
Confidence 9999999999999888999999999999999999998888899999999999999998 77778999999999999999
Q ss_pred cccccCCcccCCC------CCCcEEeecccCcc--cccCccccCcCCCCEEeCCCCc
Q 047705 238 NFSGIIPKEIGGL------KNLEYLFLGYNRLQ--GLIPDSFGNLISLKFLNLSNNN 286 (585)
Q Consensus 238 ~l~~~~~~~~~~l------~~L~~L~ls~N~l~--~~~~~~~~~l~~L~~L~l~~N~ 286 (585)
++++..+..|... +.|+.|++++|+++ ++.|.+|..+++|+.+++++|+
T Consensus 275 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 275 NITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 9998888877653 67999999999987 6778899999999999999985
No 59
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=293.94 Aligned_cols=167 Identities=31% Similarity=0.399 Sum_probs=142.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeec------CCe
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSN------EEF 484 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 484 (585)
++|++++.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999875 79999999997542 3345678899999999999999999998754 357
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999995 68999997654 7999999999999999999999 999999999999999999999999999999876
Q ss_pred cCCC--CccccccccccccccCC
Q 047705 565 IGED--QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~--~~~~~~~~~gt~~y~aP 585 (585)
.... ........+||++||||
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~AP 231 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAP 231 (398)
T ss_dssp -------CCCCCSSCCCCTTCCH
T ss_pred ccCccccccccccceeChHhcCH
Confidence 4321 12233567999999998
No 60
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.4e-34 Score=304.71 Aligned_cols=165 Identities=26% Similarity=0.382 Sum_probs=142.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHH---HHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDV---ECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
.++|++.+.||+|+||+||+|+.+ +|+.||||++++.. ........+ ++.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999876 79999999997542 112223333 45667778999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+|||||+||+|.+++.+.. .+++..++.|+.||+.||+||| +++||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998764 6899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.. .....+||+.||||
T Consensus 344 ~~----~~~t~~GTp~YmAP 359 (689)
T 3v5w_A 344 KK----KPHASVGTHGYMAP 359 (689)
T ss_dssp SC----CCCSCCSCGGGCCH
T ss_pred CC----CCCCccCCcCccCH
Confidence 22 22457899999998
No 61
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.9e-32 Score=287.26 Aligned_cols=279 Identities=21% Similarity=0.236 Sum_probs=233.8
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS 81 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (585)
+| .|+.+++|++|+|++|++++. | ++.+++|++|+|++|.|++. + +..+++|++|+|++|+++.++ +.
T Consensus 57 ~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~---~~~l~~L~~L~L~~N~l~~l~----~~ 124 (457)
T 3bz5_A 57 MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D---VTPLTKLTYLNCDTNKLTKLD----VS 124 (457)
T ss_dssp CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C---CTTCTTCCEEECCSSCCSCCC----CT
T ss_pred Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e---cCCCCcCCEEECCCCcCCeec----CC
Confidence 55 689999999999999999865 3 99999999999999999864 3 558999999999999999975 78
Q ss_pred CCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCc
Q 047705 82 NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQ 161 (585)
Q Consensus 82 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 161 (585)
.+++|++|++++|+++++ + ++.++. |++|++++|+..+.+ .+..+++|++|++++|+++++ + +..+++|+
T Consensus 125 ~l~~L~~L~l~~N~l~~l-~---l~~l~~-L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~ 194 (457)
T 3bz5_A 125 QNPLLTYLNCARNTLTEI-D---VSHNTQ-LTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLN 194 (457)
T ss_dssp TCTTCCEEECTTSCCSCC-C---CTTCTT-CCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCC
T ss_pred CCCcCCEEECCCCcccee-c---cccCCc-CCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCC
Confidence 899999999999999876 2 556665 999999999665555 488999999999999999975 3 88999999
Q ss_pred eEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEc-------
Q 047705 162 GLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDF------- 234 (585)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~l------- 234 (585)
.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++++|......+..+++|+.|++
T Consensus 195 ~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~ 268 (457)
T 3bz5_A 195 RLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLE 268 (457)
T ss_dssp EEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred EEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCE
Confidence 999999999976 48899999999999999997 45 889999999999999844334556666655554
Q ss_pred ---cCCcccccCCcccCCCCCCcEEeecccCcccccCc--------cccCcCCCCEEeCCCCccCccCChhhccCCccce
Q 047705 235 ---SMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPD--------SFGNLISLKFLNLSNNNLSGAIPASLEKLSYLED 303 (585)
Q Consensus 235 ---s~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~--------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 303 (585)
++|.+.+.+| +..+++|+.|++++|+..+.+|. .++.+++|+.|++++|++++. + +..+++|+.
T Consensus 269 L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~ 343 (457)
T 3bz5_A 269 IDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKS 343 (457)
T ss_dssp CCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSE
T ss_pred EECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcE
Confidence 4454444443 56789999999999987665553 356678999999999999985 3 889999999
Q ss_pred EEeecCcCee
Q 047705 304 LNLSFNKLEG 313 (585)
Q Consensus 304 l~l~~N~l~~ 313 (585)
|++++|.+++
T Consensus 344 L~l~~N~l~~ 353 (457)
T 3bz5_A 344 LSCVNAHIQD 353 (457)
T ss_dssp EECCSSCCCB
T ss_pred EECCCCCCCC
Confidence 9999999986
No 62
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.8e-33 Score=284.65 Aligned_cols=146 Identities=23% Similarity=0.311 Sum_probs=130.1
Q ss_pred HhcCCCCccceecccCceEEEEEEeC----CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 485 (585)
...+.|++.+.||+|+||+||+|+.+ +++.||+|++.... ...++.+|+++++.+ +||||++++++|.+++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 45578999999999999999999753 46789999986543 235678899999998 699999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC-CcEEEeeecccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN-MIAYLSDFGIAKLL 564 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~-~~~kl~Dfg~a~~~ 564 (585)
|+|||||+||+|.+++. .+++.++..++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999984 4789999999999999999999 9999999999999999866 89999999999865
Q ss_pred c
Q 047705 565 I 565 (585)
Q Consensus 565 ~ 565 (585)
.
T Consensus 169 ~ 169 (361)
T 4f9c_A 169 H 169 (361)
T ss_dssp T
T ss_pred C
Confidence 3
No 63
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.7e-33 Score=299.98 Aligned_cols=167 Identities=22% Similarity=0.336 Sum_probs=150.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||+||+|+++ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999876 7999999999876656667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC--CCcEEEeeecccccccCCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD--NMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~ 569 (585)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++. .+.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999999876667999999999999999999999 999999999999999985 489999999999976432
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 311 -~~~~~~~GT~~y~AP 325 (573)
T 3uto_A 311 -QSVKVTTGTAEFAAP 325 (573)
T ss_dssp -SEEEEECSSGGGCCH
T ss_pred -CceeeeEECccccCH
Confidence 223456899999998
No 64
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.98 E-value=1.4e-31 Score=282.74 Aligned_cols=252 Identities=26% Similarity=0.297 Sum_probs=185.0
Q ss_pred ccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEE
Q 047705 61 LEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITID 140 (585)
Q Consensus 61 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 140 (585)
...++.+++.++.+|. .+ .++|++|+|++|+|+++.+. .+.+++. |++|+|++|++++..+..|.++++|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~--~~--~~~l~~L~L~~n~i~~~~~~-~~~~l~~-L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQ--GI--PSNTRYLNLMENNIQMIQAD-TFRHLHH-LEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SCEEECCSSCCSSCCS--CC--CTTCSEEECCSSCCCEECTT-TTTTCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcEEEECCCCcCccCC--CC--CCCccEEECcCCcCceECHH-HcCCCCC-CCEEECCCCccCCcChhhccCcccCCEEE
Confidence 3455555556655552 12 14556666666666555444 4455554 66666666666666666666666777777
Q ss_pred eeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC-CcccccCcccccCcccchhhcCCCCC-C
Q 047705 141 LGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG-NKLSRSIPACFNNLIALRILSLGSND-P 218 (585)
Q Consensus 141 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~n~-~ 218 (585)
|++|+++++.+..|.++++|++|+|++|+|+.+.+..|..+++|++|++++ |.+....+..|..+++|++|++++|. .
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 777776666666666667777777777776666566666667777777766 44444444456666777777777766 2
Q ss_pred CCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccC
Q 047705 219 LPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKL 298 (585)
Q Consensus 219 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 298 (585)
....+..+++|+.|++++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..+
T Consensus 210 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 210 DMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp SCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred ccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 22357788899999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred CccceEEeecCcCeeeCCCC
Q 047705 299 SYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 299 ~~L~~l~l~~N~l~~~~~~~ 318 (585)
++|+.|+|++|+|.|+|...
T Consensus 290 ~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TTCCEEECCSSCEECSTTTH
T ss_pred cCCCEEEccCCCcCCCCCch
Confidence 99999999999999999754
No 65
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=1.7e-31 Score=281.03 Aligned_cols=252 Identities=26% Similarity=0.275 Sum_probs=169.7
Q ss_pred CCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
.+.++.+++.++..+... .+++++|+|++|+|+.++. ..|..+++|++|+|++|+|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~----~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~------------------ 101 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGI----STNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIR------------------ 101 (440)
T ss_dssp SCEEECCSCCCSSCCSCC----CTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCC------------------
T ss_pred CCEEEeCCCCcCcCCCCC----CCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCC------------------
Confidence 345555555554222211 2445555555555555543 44555555555555555554
Q ss_pred EeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC-Ccc
Q 047705 116 QMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG-NKL 194 (585)
Q Consensus 116 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l 194 (585)
+..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|++ |.+
T Consensus 102 --------~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l 173 (440)
T 3zyj_A 102 --------TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL 173 (440)
T ss_dssp --------EECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC
T ss_pred --------ccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc
Confidence 44444455555555555555555555555555555555555555555554445555555555555555 333
Q ss_pred cccCcccccCcccchhhcCCCCC-CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccC
Q 047705 195 SRSIPACFNNLIALRILSLGSND-PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGN 273 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 273 (585)
....+..|..+++|++|++++|. ...+.+..+++|+.|++++|.+++..|..|.++++|+.|+|++|+++++.+..|..
T Consensus 174 ~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 174 SYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp CEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred ceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 33333345555555555555554 11124677889999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 274 LISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 274 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|.|+|...
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCch
Confidence 999999999999999888888999999999999999999999754
No 66
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=4.3e-32 Score=271.55 Aligned_cols=275 Identities=19% Similarity=0.191 Sum_probs=200.7
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccC--CcchhhcccccccE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGIL--PKTSIGNLSHSLED 114 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~~~L~~ 114 (585)
+.++.+++.++..+. .. .++|++|+|++|+++.+|. ..|..+++|++|+|++|+++... +. .+..++. |++
T Consensus 10 ~~l~c~~~~l~~ip~-~~---~~~l~~L~L~~n~l~~i~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~~~~~~-L~~ 82 (306)
T 2z66_A 10 TEIRCNSKGLTSVPT-GI---PSSATRLELESNKLQSLPH-GVFDKLTQLTKLSLSSNGLSFKGCCSQ-SDFGTTS-LKY 82 (306)
T ss_dssp TEEECCSSCCSSCCS-CC---CTTCCEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCEEEEEEH-HHHSCSC-CCE
T ss_pred CEEEcCCCCcccCCC-CC---CCCCCEEECCCCccCccCH-hHhhccccCCEEECCCCccCcccCccc-ccccccc-cCE
Confidence 467777777773333 22 3578888888888887775 66778888888888888876432 22 2333443 777
Q ss_pred EEeecCcceecCCccccCCCCccEEEeeCCccccccc-hhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCc
Q 047705 115 FQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSIL-ITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNK 193 (585)
Q Consensus 115 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 193 (585)
|++++|.++. +|..+..+++|++|++++|++.+..+ ..|..+++|++|++++|.+++..+..+..+++|++|++++|.
T Consensus 83 L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 7777777664 44457777888888888888876655 567777888888888888877777777777888888888887
Q ss_pred ccc-cCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCcccc
Q 047705 194 LSR-SIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFG 272 (585)
Q Consensus 194 l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 272 (585)
+++ ..|. .+..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+..+.
T Consensus 162 l~~~~~~~---------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 162 FQENFLPD---------------------IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp EGGGEECS---------------------CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred cccccchh---------------------HHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc
Confidence 764 2333 455666777788888888888888888899999999999999887777888
Q ss_pred CcCCCCEEeCCCCccCccCChhhccCC-ccceEEeecCcCeeeCCCCCC---CCCCCccccCCCCcccCCCC
Q 047705 273 NLISLKFLNLSNNNLSGAIPASLEKLS-YLEDLNLSFNKLEGEIPRGGS---FGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 273 ~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~~~~---~~~~~~~~~~~n~~~c~~~~ 340 (585)
.+++|+.|++++|++++..|..+..++ +|++|++++|+|+|.|+..+. ...........+...|..|.
T Consensus 221 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 221 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp TCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred CcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 889999999999999988888888884 899999999999988764321 12223344455667777664
No 67
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=279.39 Aligned_cols=277 Identities=18% Similarity=0.183 Sum_probs=163.6
Q ss_pred CEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEcc
Q 047705 13 EELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLS 92 (585)
Q Consensus 13 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls 92 (585)
...++++|.++ .+|..+. ++|++|+|++|.|++ ++...+..+++|++|+|++|+++.++. ..|..+++|++|+|+
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLS 108 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECC
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCH-hhcCCCCCCCEEECC
Confidence 34555555555 3444333 256666666666553 222223355566666666666655543 445555666666666
Q ss_pred CCCCcccCCcchhhcccccccEEEeecCcceecCC-ccccCCCCccEEEeeCC-ccccccchhhhCCCCCceEEccCCCC
Q 047705 93 NNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIP-EEIGNLTNLITIDLGGN-KLNGSILITLSKLQKLQGLVLDDNKL 170 (585)
Q Consensus 93 ~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l 170 (585)
+|+++++.+. .++.+++ |++|++++|.+++..+ ..|..+++|++|++++| .+.++.+..|.++++|++|++++|++
T Consensus 109 ~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 109 YNYLSNLSSS-WFKPLSS-LTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp SSCCSSCCHH-HHTTCTT-CSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCcCCcCCHh-HhCCCcc-CCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 6665543222 3444443 5555555555554333 34555555555555555 24444444555555555555555555
Q ss_pred CccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccC--
Q 047705 171 EGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIG-- 248 (585)
Q Consensus 171 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-- 248 (585)
++..|..+..+++|++|++++|.++...+.. +..+++|+.|++++|.+++..+..+.
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~---------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIF---------------------VDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHH---------------------HHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhh---------------------hhhcccccEEECCCCccccccccccccc
Confidence 5555555555555555555555554222222 22355666777777777765444332
Q ss_pred -CCCCCcEEeecccCccc----ccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC
Q 047705 249 -GLKNLEYLFLGYNRLQG----LIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 249 -~l~~L~~L~ls~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
....++.+++++|.+++ .+|..+..+++|+.|++++|+++...+..+..+++|++|++++|+|.|.||.
T Consensus 246 ~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 246 ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 35667888888888776 3577788999999999999999955444568999999999999999999874
No 68
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=2.8e-31 Score=279.54 Aligned_cols=291 Identities=27% Similarity=0.297 Sum_probs=213.2
Q ss_pred CCCccccCCCCCCEEecCCCcccccCCccccCCCCC-------------CEEecCCCcCCCcCCccccCCCCCccEEEcc
Q 047705 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTL-------------KLLGLQDNSLSGSLSSITDVRLPNLEELVLW 67 (585)
Q Consensus 1 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 67 (585)
+||++|+++++|++|++++|++++..|..++++++| ++|++++|.+++.+. . .++|++|+++
T Consensus 25 ~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~-~----~~~L~~L~l~ 99 (454)
T 1jl5_A 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE-L----PPHLESLVAS 99 (454)
T ss_dssp ---------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS-C----CTTCSEEECC
T ss_pred hCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC-C----cCCCCEEEcc
Confidence 479999999999999999999999999999988865 999999999985433 2 4789999999
Q ss_pred CCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccc
Q 047705 68 GNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLN 147 (585)
Q Consensus 68 ~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 147 (585)
+|+++.+|. .+++|++|++++|+++++. ..+.+|++|++++|++++ +| .|+.+++|++|++++|+++
T Consensus 100 ~n~l~~lp~-----~~~~L~~L~l~~n~l~~l~------~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~ 166 (454)
T 1jl5_A 100 CNSLTELPE-----LPQSLKSLLVDNNNLKALS------DLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK 166 (454)
T ss_dssp SSCCSSCCC-----CCTTCCEEECCSSCCSCCC------SCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred CCcCCcccc-----ccCCCcEEECCCCccCccc------CCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc
Confidence 999999873 2488999999999997542 223459999999999986 56 5999999999999999998
Q ss_pred cccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCC
Q 047705 148 GSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGN 225 (585)
Q Consensus 148 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~ 225 (585)
++ |.. .++|++|++++|++++ +| .+..+++|++|++++|.+++ +|... ++|+.|++++|. .+| .+..
T Consensus 167 ~l-p~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~lp-~~~~ 235 (454)
T 1jl5_A 167 KL-PDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILEELP-ELQN 235 (454)
T ss_dssp CC-CCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSSCC-CCTT
T ss_pred cc-CCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCCccc-ccCC
Confidence 63 332 3589999999999986 45 58889999999999999985 44432 588888999887 444 4788
Q ss_pred CCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEE
Q 047705 226 LKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLN 305 (585)
Q Consensus 226 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 305 (585)
+++|+.|++++|++++. |.. +++|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .++|+.|+
T Consensus 236 l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~ 303 (454)
T 1jl5_A 236 LPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLN 303 (454)
T ss_dssp CTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEE
T ss_pred CCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEE
Confidence 88899999999988863 432 3778888888888886 3443 36788888888888763 211 14677777
Q ss_pred eecCcCeeeCCCCCCCCCCCccccCCCCcc
Q 047705 306 LSFNKLEGEIPRGGSFGNFSAESFEGNELL 335 (585)
Q Consensus 306 l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 335 (585)
+++|.+++.+.. ...++.+++.+|...
T Consensus 304 l~~N~l~~i~~~---~~~L~~L~Ls~N~l~ 330 (454)
T 1jl5_A 304 ASSNEIRSLCDL---PPSLEELNVSNNKLI 330 (454)
T ss_dssp CCSSCCSEECCC---CTTCCEEECCSSCCS
T ss_pred CcCCcCCcccCC---cCcCCEEECCCCccc
Confidence 777777654321 134555666666543
No 69
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=4.3e-32 Score=283.27 Aligned_cols=177 Identities=23% Similarity=0.318 Sum_probs=154.1
Q ss_pred CHHHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeee
Q 047705 405 SYLELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCS 480 (585)
Q Consensus 405 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 480 (585)
.+.++....++|++.+.||+|+||+||+|+++ +++.||+|+++... ......+.+|+.+++.++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34566667789999999999999999999976 57899999997642 223345888999999999999999999999
Q ss_pred cCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecc
Q 047705 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560 (585)
Q Consensus 481 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 560 (585)
+++..|+|||||+||+|.+++......+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 999999999999999999999886567999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+...... .......+||+.||||
T Consensus 222 a~~~~~~~-~~~~~~~~GT~~Y~AP 245 (437)
T 4aw2_A 222 CLKLMEDG-TVQSSVAVGTPDYISP 245 (437)
T ss_dssp CEECCTTS-CEECCSCCSCGGGCCH
T ss_pred hhhcccCC-CcccccccCCcCeeCh
Confidence 98654322 2233456899999998
No 70
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=271.76 Aligned_cols=269 Identities=20% Similarity=0.187 Sum_probs=223.7
Q ss_pred CCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 1 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+||..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|++..+ ..+..+++|++|+|++|+++.++. ..|
T Consensus 45 ~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~-~~~ 120 (353)
T 2z80_A 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSS-SWF 120 (353)
T ss_dssp SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCH-HHH
T ss_pred ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCH-hHh
Confidence 3676554 599999999999998878899999999999999999985444 345589999999999999999985 669
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecC-cceecCCccccCCCCccEEEeeCCccccccchhhhCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNC-NVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQK 159 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 159 (585)
..+++|++|+|++|+++++.+...+..+++ |++|++++| .+++..+..|..+++|++|++++|.+.+..+..|..+++
T Consensus 121 ~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 199 (353)
T 2z80_A 121 KPLSSLTFLNLLGNPYKTLGETSLFSHLTK-LQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN 199 (353)
T ss_dssp TTCTTCSEEECTTCCCSSSCSSCSCTTCTT-CCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred CCCccCCEEECCCCCCcccCchhhhccCCC-CcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc
Confidence 999999999999999987655246777776 999999999 588888889999999999999999999998999999999
Q ss_pred CceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcc
Q 047705 160 LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNF 239 (585)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l 239 (585)
|++|++++|+++...+..+..+++|++|++++|.+++..+..+.. ......++.+++++|.+
T Consensus 200 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------------------~~~~~~l~~l~L~~~~l 261 (353)
T 2z80_A 200 VSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST------------------GETNSLIKKFTFRNVKI 261 (353)
T ss_dssp EEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------------------------CCCCCCEEEEESCBC
T ss_pred CCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc------------------ccccchhhccccccccc
Confidence 999999999998655555667899999999999998755443322 12234566677777776
Q ss_pred cc----cCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCC
Q 047705 240 SG----IIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIP 292 (585)
Q Consensus 240 ~~----~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 292 (585)
++ .+|..+..+++|+.|++++|+++.+.+..|..+++|+.|++++|++++..|
T Consensus 262 ~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 262 TDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 65 356778899999999999999996544557899999999999999997654
No 71
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=3.7e-31 Score=261.92 Aligned_cols=252 Identities=22% Similarity=0.184 Sum_probs=182.3
Q ss_pred cEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEe
Q 047705 62 EELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDL 141 (585)
Q Consensus 62 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 141 (585)
++++.+++.++.+|. . -.++|++|+|++|+++++.+. .++.++. |++|++++|.+++..+..|..+++|++|++
T Consensus 14 ~~~~c~~~~l~~ip~-~---~~~~l~~L~l~~n~i~~~~~~-~~~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPV-G---IPAASQRIFLHGNRISHVPAA-SFRACRN-LTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCT-T---CCTTCSEEECTTSCCCEECTT-TTTTCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCc-C---CCCCceEEEeeCCcCCccCHH-HcccCCC-CCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 577788888887763 2 246777777777777765544 4455554 666666666666666666666666666666
Q ss_pred eCCc-cccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCC
Q 047705 142 GGNK-LNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLP 220 (585)
Q Consensus 142 ~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 220 (585)
++|. +....+..|.++++|++|++++|++++..|..+..+++|++|++++|.+++..+.
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------------- 147 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD-------------------- 147 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT--------------------
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh--------------------
Confidence 6665 5555556666666666666666666655555666666666666666666543332
Q ss_pred ccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCc
Q 047705 221 LEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSY 300 (585)
Q Consensus 221 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 300 (585)
.+..+++|+.|++++|.+++..+..|.++++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..+++
T Consensus 148 -~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 148 -TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp -TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred -HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 3556677888888888888877778999999999999999999888999999999999999999999877778899999
Q ss_pred cceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCCC
Q 047705 301 LEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 301 L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 340 (585)
|++|++++|+|.|.|+..+.+..+.......+.+.|..|.
T Consensus 227 L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESG
T ss_pred cCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCch
Confidence 9999999999999888654444455555566777787664
No 72
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=7.4e-31 Score=262.55 Aligned_cols=278 Identities=25% Similarity=0.270 Sum_probs=225.8
Q ss_pred CCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCcc-CccccCCCCCcEEE
Q 047705 12 LEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNF-LSSLSNCKSLTVIG 90 (585)
Q Consensus 12 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~~l~~L~~L~ 90 (585)
-+.++.+++.++ .+|..+. ++|++|+|++|.|+ .++...+..+++|++|+|++|+++.++. ...+..+++|++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 367899999987 5666554 58999999999998 5555555689999999999999987631 14566789999999
Q ss_pred ccCCCCcccCCcchhhcccccccEEEeecCcceecCC-ccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 91 LSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIP-EEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 91 Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
|++|.+..+.+ .+..+++ |++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..|.++++|++|++++|.
T Consensus 85 Ls~n~i~~l~~--~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 85 LSFNGVITMSS--NFLGLEQ-LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp CCSCSEEEEEE--EEETCTT-CCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred CCCCccccChh--hcCCCCC-CCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 99999986433 3556665 9999999999997766 679999999999999999998889999999999999999999
Q ss_pred CCc-cCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccC
Q 047705 170 LEG-SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIG 248 (585)
Q Consensus 170 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 248 (585)
+++ ..|..+..+++|++|++++|.+++..|..|. .+++|+.|++++|.+++..+..|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~---------------------~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN---------------------SLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT---------------------TCTTCCEEECTTSCCSBCCSGGGT
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc---------------------CCCCCCEEECCCCccCccChhhcc
Confidence 986 5788899999999999999999876665444 455667777788888877777888
Q ss_pred CCCCCcEEeecccCcccccCccccCcC-CCCEEeCCCCccCccCCh-h-hccCCccceEEeecCcCeeeCCC
Q 047705 249 GLKNLEYLFLGYNRLQGLIPDSFGNLI-SLKFLNLSNNNLSGAIPA-S-LEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 249 ~l~~L~~L~ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~-~-~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
.+++|+.|++++|++++..|..+..++ +|+.|++++|+++..-+. . ...+...+.+.+..+.+.|..|.
T Consensus 221 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 221 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp TCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred CcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 899999999999999988888888884 899999999999864321 1 22344455666778888888775
No 73
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=8.7e-30 Score=268.12 Aligned_cols=264 Identities=31% Similarity=0.355 Sum_probs=127.7
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
++|++|+|++|++++ +| .|+++++|++|++++|++++ ++.. .++|++|++++|+++.+| .+..+++|++|
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~l~---~~~~l~~L~~L 200 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEELP---ELQNLPFLTAI 200 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSSCC---CCTTCTTCCEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCcCc---cccCCCCCCEE
Confidence 345555555555543 33 35555555555555555553 2211 235555555555555543 25555555555
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
++++|+++++.. .+.+|++|++++|.++ .+| .+..+++|++|++++|+++++.. ..++|++|++++|+
T Consensus 201 ~l~~N~l~~l~~------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 201 YADNNSLKKLPD------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNY 268 (454)
T ss_dssp ECCSSCCSSCCC------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCC------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCc
Confidence 555555553211 1123555555555555 333 25555555666665555554221 12455555666555
Q ss_pred CCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCC-CCCcEEEccCCcccccCCcccC
Q 047705 170 LEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNL-KVLVGIDFSMNNFSGIIPKEIG 248 (585)
Q Consensus 170 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~ 248 (585)
+++ +|.. .++|++|++++|.+++. |.. .++|+.|++++|.... +..+ ++|+.|++++|++++ +|..
T Consensus 269 l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~--i~~~~~~L~~L~Ls~N~l~~-lp~~-- 335 (454)
T 1jl5_A 269 LTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS--LCDLPPSLEELNVSNNKLIE-LPAL-- 335 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE--ECCCCTTCCEEECCSSCCSC-CCCC--
T ss_pred ccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc--ccCCcCcCCEEECCCCcccc-cccc--
Confidence 553 2221 24555666666665542 111 1455666666654221 1122 366666666666664 3332
Q ss_pred CCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCc--cCChhhccC-------------CccceEEeecCcCee
Q 047705 249 GLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSG--AIPASLEKL-------------SYLEDLNLSFNKLEG 313 (585)
Q Consensus 249 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l-------------~~L~~l~l~~N~l~~ 313 (585)
+++|+.|++++|++++ +|. .+++|++|++++|++++ .+|..+..+ ++|+.||+++|++++
T Consensus 336 -~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 336 -PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp -CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred -CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 3566666666666664 343 34666666666666666 455565555 566666666666665
No 74
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.5e-29 Score=267.26 Aligned_cols=245 Identities=23% Similarity=0.214 Sum_probs=153.6
Q ss_pred CCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
.+.++.+++.++..+... .++|++|+|++|+|+.++. ..|..+++|++|+|++|+|+++.+. .+.++++ |++|
T Consensus 56 ~~~v~c~~~~l~~iP~~~----~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~-L~~L 128 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGI----PSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVG-AFNGLAS-LNTL 128 (452)
T ss_dssp SCEEECCSSCCSSCCSCC----CTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEE
T ss_pred CcEEEECCCCcCccCCCC----CCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChh-hccCccc-CCEE
Confidence 344555555554222211 2455555555555555543 4455555555555555555544443 3444443 5555
Q ss_pred EeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC-CCCCccCcccccCCCCCcEEEcCCCcc
Q 047705 116 QMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD-NKLEGSIPDDICRLVELYKLELGGNKL 194 (585)
Q Consensus 116 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l 194 (585)
+|++|++++..+..|..+++|++|+|++|++.++.+..|.++++|++|+|++ |.++.+.+..|..+++|++|+|++|.+
T Consensus 129 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 129 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp ECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 5555555555555555555666666666665555555555556666666655 344433344455555666666666665
Q ss_pred cccCcccccCcccchhhcCCCCC---CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccc
Q 047705 195 SRSIPACFNNLIALRILSLGSND---PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 271 (585)
++. | .+..+++|+.|+|++|. ..|..+..+++|+.|++++|++++..+..|.++++|+.|+|++|++++..+..|
T Consensus 209 ~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 286 (452)
T 3zyi_A 209 KDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF 286 (452)
T ss_dssp SSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSS
T ss_pred ccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHh
Confidence 532 2 35555566666666654 334456777788888899999999999999999999999999999998888889
Q ss_pred cCcCCCCEEeCCCCccCc
Q 047705 272 GNLISLKFLNLSNNNLSG 289 (585)
Q Consensus 272 ~~l~~L~~L~l~~N~l~~ 289 (585)
..+++|+.|+|++|++.-
T Consensus 287 ~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 287 TPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCTTCCEEECCSSCEEC
T ss_pred ccccCCCEEEccCCCcCC
Confidence 999999999999999873
No 75
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.1e-29 Score=265.17 Aligned_cols=256 Identities=23% Similarity=0.270 Sum_probs=207.1
Q ss_pred CccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC
Q 047705 3 PLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN 82 (585)
Q Consensus 3 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 82 (585)
|..-....+...++.+++.++ .+|..+. +++++|+|++|+|++ ++...+..+++|++|+|++|+|+.++. ..|..
T Consensus 36 p~~C~C~~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~-~~~~~ 110 (440)
T 3zyj_A 36 PSVCSCSNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEI-GAFNG 110 (440)
T ss_dssp CSSSEECTTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCE-ECTTTTSSCSSCCEEECCSSCCCEECG-GGGTT
T ss_pred CCCCEeCCCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCe-eCHHHhhCCCCCCEEECCCCcCCccCh-hhccC
Confidence 333344456778999999997 6777666 589999999999984 444456689999999999999999986 88999
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeC-CccccccchhhhCCCCCc
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGG-NKLNGSILITLSKLQKLQ 161 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~ 161 (585)
+++|++|+|++|+++.+.+. .+..+++ |++|+|++|.++...+..|..+++|++|+|++ |.+..+.+..|.++++|+
T Consensus 111 l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 188 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNG-AFVYLSK-LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 188 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTT-TSCSCSS-CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCC
T ss_pred CccCCEEECCCCcCCeeCHh-Hhhcccc-CceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccC
Confidence 99999999999999866554 5666665 88888888888887777888888888888888 455555566788888888
Q ss_pred eEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccc
Q 047705 162 GLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSG 241 (585)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~ 241 (585)
+|+|++|+|+. +| .+..+++|++|+|++|.+++..|.. +..+++|+.|++++|++++
T Consensus 189 ~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~---------------------~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 189 YLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGS---------------------FQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp EEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTT---------------------TTTCTTCCEEECTTCCCCE
T ss_pred eecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhh---------------------hccCccCCEEECCCCceeE
Confidence 88888888884 34 4777888888888888887665554 4455667777778888888
Q ss_pred cCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccC
Q 047705 242 IIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLS 288 (585)
Q Consensus 242 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 288 (585)
+.+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred EChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88888999999999999999999888888888999999999999876
No 76
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=269.40 Aligned_cols=177 Identities=24% Similarity=0.339 Sum_probs=153.8
Q ss_pred CHHHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeee
Q 047705 405 SYLELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCS 480 (585)
Q Consensus 405 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 480 (585)
.+.+.....++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|+.++..++||||++++++|.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455566789999999999999999999976 78999999997542 233456889999999999999999999999
Q ss_pred cCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecc
Q 047705 481 NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560 (585)
Q Consensus 481 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 560 (585)
+.+..|+||||++||+|.+++......+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999999876557899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+...... .......+||+.||||
T Consensus 209 a~~~~~~~-~~~~~~~~Gt~~Y~AP 232 (412)
T 2vd5_A 209 CLKLRADG-TVRSLVAVGTPDYLSP 232 (412)
T ss_dssp CEECCTTS-CEECSSCCSCGGGCCH
T ss_pred heeccCCC-ccccceeccccCcCCH
Confidence 98764322 2223456899999998
No 77
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=2.8e-30 Score=260.43 Aligned_cols=169 Identities=26% Similarity=0.375 Sum_probs=149.8
Q ss_pred HHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
....++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+++++.++||||+++++++...+..|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 345678999999999999999999874 8999999999764 2344567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999999997754 6899999999999999999999 89999999999999999999999999999986543
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
.. .....+||++|+||
T Consensus 167 ~~---~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 167 GG---KLDAFCGAPPYAAP 182 (328)
T ss_dssp SC---GGGTTSSSGGGCCH
T ss_pred CC---ccccccCCcceeCc
Confidence 22 23456899999998
No 78
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=7.4e-30 Score=254.04 Aligned_cols=166 Identities=30% Similarity=0.405 Sum_probs=148.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++...+..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 467999999999999999999864 7899999999876655667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--c
Confidence 9999999999875 5889999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred ccccccccccccCC
Q 047705 572 TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 172 ~~~~~~gt~~y~aP 185 (297)
T 3fxz_A 172 KRSTMVGTPYWMAP 185 (297)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCCccCCcCccCh
Confidence 23456799999998
No 79
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=4.1e-30 Score=259.94 Aligned_cols=167 Identities=28% Similarity=0.382 Sum_probs=147.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+..|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467999999999999999999876 68999999998642 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999997654 6889999999999999999999 8999999999999999999999999999998643222
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 160 --~~~~~~~gt~~y~aP 174 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAP 174 (337)
T ss_dssp --CCBCCCEECGGGCCG
T ss_pred --CcccccccChhhCCh
Confidence 223457899999998
No 80
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=261.87 Aligned_cols=169 Identities=29% Similarity=0.370 Sum_probs=142.6
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 485 (585)
...++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+..|.++++.+ +||||+++++++...+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999876 68999999998642 33456778899999988 799999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 99999999999999998754 6899999999999999999999 8999999999999999999999999999998543
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.. .......+||+.||||
T Consensus 176 ~~--~~~~~~~~gt~~y~aP 193 (353)
T 3txo_A 176 CN--GVTTATFCGTPDYIAP 193 (353)
T ss_dssp C-----------CCGGGCCH
T ss_pred cC--CccccccCCCcCeECh
Confidence 22 2233457899999998
No 81
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=2.1e-30 Score=268.43 Aligned_cols=173 Identities=26% Similarity=0.340 Sum_probs=150.7
Q ss_pred HHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC
Q 047705 407 LELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE 482 (585)
Q Consensus 407 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 482 (585)
.++....++|++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+.+|+.+++.++||||++++++|.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 455566789999999999999999999876 68899999997532 22345688899999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
+..|+|||||+||+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999765 5889999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
...... .......+||+.||||
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~AP 238 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISP 238 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCH
T ss_pred eeccCC-cccccCCcCCccccCH
Confidence 754322 2233467899999998
No 82
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.2e-30 Score=256.34 Aligned_cols=170 Identities=26% Similarity=0.440 Sum_probs=149.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357899999999999999999876 6899999998766666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999986668999999999999999999999 8999999999999999999999999999998764322111
Q ss_pred ------------ccccccccccccCC
Q 047705 572 ------------TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ------------~~~~~~gt~~y~aP 585 (585)
.....+||+.|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAP 191 (310)
T ss_dssp --------------CCCCSCGGGCCH
T ss_pred cccccccccccccccccCCCcceeCH
Confidence 11246799999998
No 83
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.5e-29 Score=250.36 Aligned_cols=254 Identities=23% Similarity=0.268 Sum_probs=217.2
Q ss_pred CCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
-++++.+++.++.. |.. ..++|++|+|++|+++.++. ..|..+++|++|+|++|+++++.+. .++.++. |++|
T Consensus 13 ~~~~~c~~~~l~~i-p~~---~~~~l~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L 85 (285)
T 1ozn_A 13 KVTTSCPQQGLQAV-PVG---IPAASQRIFLHGNRISHVPA-ASFRACRNLTILWLHSNVLARIDAA-AFTGLAL-LEQL 85 (285)
T ss_dssp SCEEECCSSCCSSC-CTT---CCTTCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEE
T ss_pred CeEEEcCcCCcccC-CcC---CCCCceEEEeeCCcCCccCH-HHcccCCCCCEEECCCCccceeCHh-hcCCccC-CCEE
Confidence 47899999999844 432 25799999999999999986 7899999999999999999988776 6777776 9999
Q ss_pred EeecCc-ceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcc
Q 047705 116 QMHNCN-VTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKL 194 (585)
Q Consensus 116 ~l~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 194 (585)
++++|. ++...+..|..+++|++|++++|.+.+..+..|.++++|++|++++|++++..+..|..+++|++|+|++|.+
T Consensus 86 ~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp ECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 999997 8888789999999999999999999998899999999999999999999988888899999999999999999
Q ss_pred cccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCc
Q 047705 195 SRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNL 274 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 274 (585)
++..+..| ..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+..+..+
T Consensus 166 ~~~~~~~~---------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 224 (285)
T 1ozn_A 166 SSVPERAF---------------------RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (285)
T ss_dssp CEECTTTT---------------------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred cccCHHHh---------------------cCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccC
Confidence 86554433 445667777888889988889999999999999999999998777789999
Q ss_pred CCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 275 ISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 275 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
++|+.|++++|+++...+.. .-...++.+..+.|.+.|..|..
T Consensus 225 ~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 225 RALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp TTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred cccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 99999999999998544321 22244666778899999988863
No 84
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=2.7e-30 Score=260.34 Aligned_cols=179 Identities=37% Similarity=0.619 Sum_probs=155.7
Q ss_pred cCHHHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC
Q 047705 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE 483 (585)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 483 (585)
+.+.++...+++|++.+.||+|+||.||+|++++++.||+|++........+.+.+|+++++.++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34445566788999999999999999999998889999999987665556778999999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGI 560 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 560 (585)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997653 25889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++...............||+.|+||
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aP 210 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDP 210 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCH
T ss_pred ccccccccccccccccCCCccccCH
Confidence 9865433333333456799999998
No 85
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=6.8e-30 Score=259.15 Aligned_cols=169 Identities=27% Similarity=0.396 Sum_probs=140.9
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3578999999999999999999875 78999999987543 233467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+|||+|.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999997654 6899999999999999999999 8999999999999999999999999999988653222
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......+||+.|+||
T Consensus 163 ~~~~~~~~gt~~y~aP 178 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAP 178 (347)
T ss_dssp ---------CGGGCCH
T ss_pred CccccccCCccCccCH
Confidence 2223456899999998
No 86
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=1.1e-29 Score=257.64 Aligned_cols=171 Identities=25% Similarity=0.376 Sum_probs=146.8
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCC
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEE 483 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 483 (585)
.....++|++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 3455688999999999999999999976 68999999998642 23456678899999887 9999999999999999
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
..|+||||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+|+.
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999999998754 6899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..... ......+||+.|+||
T Consensus 168 ~~~~~--~~~~~~~gt~~y~aP 187 (345)
T 1xjd_A 168 NMLGD--AKTNTFCGTPDYIAP 187 (345)
T ss_dssp CCCTT--CCBCCCCSCGGGCCH
T ss_pred cccCC--CcccCCCCCcccCCh
Confidence 43221 223457899999998
No 87
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=8.5e-30 Score=262.48 Aligned_cols=168 Identities=27% Similarity=0.334 Sum_probs=145.5
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 486 (585)
..++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+..|..+++++ +||||++++++|.+++..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3467999999999999999999876 68899999998652 22345678899999887 8999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999998754 6899999999999999999999 89999999999999999999999999999986332
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
. .......+||+.||||
T Consensus 206 ~--~~~~~~~~gt~~Y~aP 222 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAP 222 (396)
T ss_dssp T--TCCBCCCCBCGGGCCH
T ss_pred C--CCccccccCCcccCCc
Confidence 2 2233567899999998
No 88
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=5e-29 Score=251.36 Aligned_cols=225 Identities=20% Similarity=0.211 Sum_probs=144.9
Q ss_pred CCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccE
Q 047705 59 PNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLIT 138 (585)
Q Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 138 (585)
+++++|+|++|.++.+| ..+..+++|++|+|++|.++ ..|. .++.++. |++|+|++|.++ .+|..+..+++|++
T Consensus 81 ~~l~~L~L~~n~l~~lp--~~l~~l~~L~~L~L~~n~l~-~lp~-~~~~l~~-L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFP--DQAFRLSHLQHMTIDAAGLM-ELPD-TMQQFAG-LETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp TTCCEEEEESSCCSSCC--SCGGGGTTCSEEEEESSCCC-CCCS-CGGGGTT-CSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred cceeEEEccCCCchhcC--hhhhhCCCCCEEECCCCCcc-chhH-HHhccCC-CCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 44555555555555444 23444555555555555554 2232 2333433 444444444444 33444555555555
Q ss_pred EEeeCCccccccchhhh---------CCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccch
Q 047705 139 IDLGGNKLNGSILITLS---------KLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALR 209 (585)
Q Consensus 139 L~L~~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 209 (585)
|+|++|++.+..|..+. ++++|++|+|++|+|+ .+|..+..+++|++|+|++|.+++ +|.
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~--------- 223 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGP--------- 223 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCG---------
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cch---------
Confidence 55555555444444433 3666777777777666 555566666777777777776663 222
Q ss_pred hhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCc
Q 047705 210 ILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSG 289 (585)
Q Consensus 210 ~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 289 (585)
.+..+++|+.|++++|.+.+.+|..|.++++|++|+|++|.+.+.+|..+..+++|+.|++++|++.+
T Consensus 224 ------------~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 224 ------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp ------------GGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ------------hhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 34455566677777777777788888888888888888888888888888888888888888888888
Q ss_pred cCChhhccCCccceEEeecCcCe
Q 047705 290 AIPASLEKLSYLEDLNLSFNKLE 312 (585)
Q Consensus 290 ~~~~~~~~l~~L~~l~l~~N~l~ 312 (585)
.+|..+..+++|+.+++..|.+.
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSC
T ss_pred hccHHHhhccCceEEeCCHHHHH
Confidence 88888888888888888877664
No 89
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=1.6e-29 Score=253.64 Aligned_cols=164 Identities=27% Similarity=0.375 Sum_probs=146.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999876 78999999998652 23456788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999998754 6899999999999999999999 99999999999999999999999999999986532
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.....+||+.|+||
T Consensus 159 ---~~~~~~gt~~y~aP 172 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAP 172 (318)
T ss_dssp ---CBCCCCSCTTTCCH
T ss_pred ---ccccccCCccccCH
Confidence 12346899999998
No 90
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=260.36 Aligned_cols=165 Identities=31% Similarity=0.415 Sum_probs=147.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||++++++|.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67999999999999999999876 68899999997542 234567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+|+.....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 9999999999998754 6899999999999999999999 899999999999999999999999999999875322
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
......+||+.||||
T Consensus 169 -~~~~~~~gt~~Y~aP 183 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAP 183 (384)
T ss_dssp -CCBCCCCSCGGGCCG
T ss_pred -CceeccCCCccccCC
Confidence 223457899999998
No 91
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=1e-29 Score=256.13 Aligned_cols=169 Identities=24% Similarity=0.359 Sum_probs=146.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999876 78999999987543 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987654 6899999999999999999999 899999999999999999999999999999876433333
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
......+||+.|+||
T Consensus 162 ~~~~~~~gt~~y~aP 176 (323)
T 3tki_A 162 RLLNKMCGTLPYVAP 176 (323)
T ss_dssp CCBCSCCSCGGGSCH
T ss_pred cccCCCccCcCccCc
Confidence 333467899999998
No 92
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.3e-28 Score=265.11 Aligned_cols=261 Identities=25% Similarity=0.269 Sum_probs=218.4
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+++.|++++|.++ .+|..+. ++|++|+|++|.|++ ++. .+++|++|+|++|+|+.+|. .+++|++|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~----~l~~L~~L~Ls~N~l~~lp~-----~l~~L~~L 106 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA----LPPELRTLEVSGNQLTSLPV-----LPPGLLEL 106 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC----CCTTCCEEEECSCCCSCCCC-----CCTTCCEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC----cCCCCCEEEcCCCcCCcCCC-----CCCCCCEE
Confidence 36899999999998 7777776 799999999999984 443 47899999999999999873 67999999
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
+|++|+++++.+ .+.+|++|++++|++++. |. .+++|++|+|++|++.++.. ..++|+.|++++|+
T Consensus 107 ~Ls~N~l~~l~~------~l~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 107 SIFSNPLTHLPA------LPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQ 172 (622)
T ss_dssp EECSCCCCCCCC------CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSC
T ss_pred ECcCCcCCCCCC------CCCCcCEEECCCCCCCcC-CC---CCCCCCEEECcCCcCCCcCC----ccCCCCEEECCCCC
Confidence 999999987543 234599999999999864 43 25899999999999996532 45789999999999
Q ss_pred CCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcEEEccCCcccccCCccc
Q 047705 170 LEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMNNFSGIIPKEI 247 (585)
Q Consensus 170 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 247 (585)
|++ +| ..+++|+.|++++|.|++ +|.. +++|+.|++++|. .+|. .+++|+.|++++|.+++ +|
T Consensus 173 l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~---~~~~L~~L~Ls~N~L~~-lp--- 237 (622)
T 3g06_A 173 LTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLTS-LP--- 237 (622)
T ss_dssp CSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC---CCTTCCEEECCSSCCSC-CC---
T ss_pred CCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC---CCCCCCEEEccCCccCc-CC---
Confidence 996 44 457899999999999985 4443 4789999999997 3332 35789999999999997 44
Q ss_pred CCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC
Q 047705 248 GGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 248 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
..+++|+.|+|++|+++. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|.
T Consensus 238 ~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 238 VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 456899999999999995 454 5689999999999999 6788999999999999999999887654
No 93
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.3e-32 Score=291.51 Aligned_cols=329 Identities=19% Similarity=0.154 Sum_probs=229.0
Q ss_pred ccCCCCCCEEecCCCcccc----cCCccccCCCCCCEEecCCCcCCCcCCccccCCCC----CccEEEccCCCCCCCc--
Q 047705 6 IGNLQNLEELDLRQNKLIG----TVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLP----NLEELVLWGNNFSELN-- 75 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~----~L~~L~L~~n~l~~~~-- 75 (585)
+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++..........++ +|++|+|++|+++...
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 5677889999999998874 34667788889999999999886322221122334 6999999999888532
Q ss_pred -cCccccCCCCCcEEEccCCCCcccCCcchhhcc---cccccEEEeecCcceecC----CccccCCCCccEEEeeCCccc
Q 047705 76 -FLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNL---SHSLEDFQMHNCNVTGDI----PEEIGNLTNLITIDLGGNKLN 147 (585)
Q Consensus 76 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~---~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 147 (585)
....+..+++|++|+|++|++++..+......+ ..+|++|++++|.+++.. +..+..+++|++|++++|.+.
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 115688888999999999988754333111111 124899999999888643 556677788999999998887
Q ss_pred cccchhhh-----CCCCCceEEccCCCCCcc----CcccccCCCCCcEEEcCCCcccccC-----cccccCcccchhhcC
Q 047705 148 GSILITLS-----KLQKLQGLVLDDNKLEGS----IPDDICRLVELYKLELGGNKLSRSI-----PACFNNLIALRILSL 213 (585)
Q Consensus 148 ~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~l 213 (585)
...+..+. ..++|++|+|++|.+++. ++..+..+++|++|++++|.++... +..+..+++|++|++
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 65554443 366888999998888864 4666777888888888888887532 223345788888888
Q ss_pred CCCCC-------CCccCCCCCCCcEEEccCCcccccCCcccC-----CCCCCcEEeecccCcccc----cCccccCcCCC
Q 047705 214 GSNDP-------LPLEIGNLKVLVGIDFSMNNFSGIIPKEIG-----GLKNLEYLFLGYNRLQGL----IPDSFGNLISL 277 (585)
Q Consensus 214 ~~n~~-------~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-----~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L 277 (585)
++|.. ++..+..+++|+.|++++|.+++..+..+. ..++|+.|++++|.+++. ++..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 88863 234455678888888888888754443333 236788888888888765 34556667888
Q ss_pred CEEeCCCCccCccCChhhcc-----CCccceEEeecCcCee----eCCC-CCCCCCCCccccCCCCc
Q 047705 278 KFLNLSNNNLSGAIPASLEK-----LSYLEDLNLSFNKLEG----EIPR-GGSFGNFSAESFEGNEL 334 (585)
Q Consensus 278 ~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~----~~~~-~~~~~~~~~~~~~~n~~ 334 (585)
+.|++++|++++..+..+.. .++|++|++++|.++. .+|. ......++.+++.+|++
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 88888888887665554443 5688888888888774 2222 12345666777777754
No 94
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=2e-29 Score=256.03 Aligned_cols=167 Identities=28% Similarity=0.335 Sum_probs=146.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+..|+.+++++ +||||+++++++...+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357999999999999999999976 68899999998642 33456788899999988 89999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999998654 6899999999999999999999 899999999999999999999999999999864322
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ......+||+.|+||
T Consensus 164 ~--~~~~~~~gt~~y~aP 179 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAP 179 (345)
T ss_dssp T--CCBCCCCSCGGGCCH
T ss_pred C--CcccccCCCccccCc
Confidence 2 223456899999998
No 95
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=3.2e-29 Score=252.29 Aligned_cols=177 Identities=27% Similarity=0.315 Sum_probs=153.6
Q ss_pred cccCHHHHHHhcCC----------CCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCC
Q 047705 402 RTFSYLELCRATDG----------FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR 470 (585)
Q Consensus 402 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 470 (585)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35677777766653 677789999999999999976 7999999999876555667888999999999999
Q ss_pred cceeEEeeeecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC
Q 047705 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN 550 (585)
Q Consensus 471 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~ 550 (585)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998754 5899999999999999999999 8999999999999999999
Q ss_pred CcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 551 MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 551 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.+||+|||+++...... .......||+.|+||
T Consensus 178 ~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aP 210 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAP 210 (321)
T ss_dssp CCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCH
T ss_pred CcEEEeeeeeeeecccCc--cccccccCCccccCH
Confidence 999999999998754322 223456799999998
No 96
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=1.9e-29 Score=258.91 Aligned_cols=170 Identities=28% Similarity=0.461 Sum_probs=146.0
Q ss_pred cCCCCccceecccCceEEEEEEeC--------CCcEEEEEEEech-hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecC
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 482 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 482 (585)
.++|++.+.||+|+||.||+|++. ++..||||+++.. .....+.+.+|+++++.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367999999999999999999752 3567999998754 234557889999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTN---------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998653 24788899999999999999999 8999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+|+...............||+.||||
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 274 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence 99999999999999876443332333455678999998
No 97
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=3.1e-29 Score=255.90 Aligned_cols=167 Identities=26% Similarity=0.395 Sum_probs=146.5
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhh------hHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRR------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
..+.|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999876 6899999999764321 34678899999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC----cEEEeeecc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGI 560 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~ 560 (585)
.|+||||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999997654 6899999999999999999999 89999999999999998776 799999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++..... ......+||+.|+||
T Consensus 166 a~~~~~~---~~~~~~~gt~~y~aP 187 (361)
T 2yab_A 166 AHEIEDG---VEFKNIFGTPEFVAP 187 (361)
T ss_dssp CEECCTT---CCCCCCCSCGGGCCH
T ss_pred ceEcCCC---CccccCCCCccEECc
Confidence 9876432 223456799999998
No 98
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=2.1e-29 Score=256.32 Aligned_cols=169 Identities=24% Similarity=0.293 Sum_probs=146.7
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 485 (585)
...++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+..|..+++.+ +||+|+++++++...+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 34578999999999999999999976 57899999998652 23456778899999988 899999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+|+...
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 99999999999999998654 6899999999999999999999 8999999999999999999999999999998643
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.. .......+||+.||||
T Consensus 173 ~~--~~~~~~~~gt~~y~aP 190 (353)
T 2i0e_A 173 WD--GVTTKTFCGTPDYIAP 190 (353)
T ss_dssp CT--TCCBCCCCSCGGGCCH
T ss_pred cC--CcccccccCCccccCh
Confidence 22 1233457899999998
No 99
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.7e-29 Score=251.68 Aligned_cols=166 Identities=21% Similarity=0.320 Sum_probs=147.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999876 68899999987543 3446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC--CCcEEEeeecccccccCCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD--NMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~ 569 (585)
++||+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999876667899999999999999999999 899999999999999986 7899999999998764322
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 159 --~~~~~~gt~~y~aP 172 (321)
T 1tki_A 159 --NFRLLFTAPEYYAP 172 (321)
T ss_dssp --EEEEEESCGGGSCH
T ss_pred --ccccccCChhhcCc
Confidence 23456799999998
No 100
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.3e-30 Score=261.88 Aligned_cols=268 Identities=20% Similarity=0.165 Sum_probs=196.5
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+++.++++.+.+.......+..+++|++|+|++|.|++. +...+..+++|++|+|++|+++.++ .|..+++|++|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~---~~~~l~~L~~L 85 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQI-SAADLAPFTKLELLNLSSNVLYETL---DLESLSTLRTL 85 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCC-CHHHHTTCTTCCEEECTTSCCEEEE---EETTCTTCCEE
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcC-CHHHhhCCCcCCEEECCCCcCCcch---hhhhcCCCCEE
Confidence 3455667777777656566666777888888888888743 3333457788888888888887664 27778888888
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
+|++|+++++.+. + +|++|++++|.+++..+.. +++|++|++++|++++..+..|..+++|++|+|++|.
T Consensus 86 ~Ls~n~l~~l~~~------~-~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 86 DLNNNYVQELLVG------P-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp ECCSSEEEEEEEC------T-TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred ECcCCccccccCC------C-CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 8888887754321 2 3777777777777665443 4667777777777777667677777777777777777
Q ss_pred CCccCccccc-CCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccC
Q 047705 170 LEGSIPDDIC-RLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIG 248 (585)
Q Consensus 170 l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 248 (585)
+++..+..+. .+++|++|+|++|.+++. + ....+++|+.|++++|.+++..+ .|.
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~----------------------~~~~l~~L~~L~Ls~N~l~~l~~-~~~ 211 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDV-K----------------------GQVVFAKLKTLDLSSNKLAFMGP-EFQ 211 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEE-E----------------------CCCCCTTCCEEECCSSCCCEECG-GGG
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCccc-c----------------------cccccccCCEEECCCCcCCcchh-hhc
Confidence 7766665553 567777777777777643 1 12236778888899999986544 588
Q ss_pred CCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccC-ccCChhhccCCccceEEeecC-cCeeeCC
Q 047705 249 GLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLS-GAIPASLEKLSYLEDLNLSFN-KLEGEIP 316 (585)
Q Consensus 249 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~N-~l~~~~~ 316 (585)
.+++|+.|++++|++++ +|..+..+++|+.|++++|+++ +..|..+..+++|+.+++++| .+.+..|
T Consensus 212 ~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 212 SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred ccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 89999999999999995 5778889999999999999998 778888889999999999844 4554433
No 101
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.6e-28 Score=247.63 Aligned_cols=234 Identities=22% Similarity=0.258 Sum_probs=156.5
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+++.|+|++|.++ .+|..+.++++|++|+|++|.|+ .++.. +..+++|++|+|++|+++.+| ..+..+++|++|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~-~~~l~~L~~L~Ls~n~l~~lp--~~l~~l~~L~~L 155 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDT-MQQFAGLETLTLARNPLRALP--ASIASLNRLREL 155 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSC-GGGGTTCSEEEEESCCCCCCC--GGGGGCTTCCEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHH-HhccCCCCEEECCCCccccCc--HHHhcCcCCCEE
Confidence 45555555555555 44555555555555555555555 23221 124555555555555555554 345555555555
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
+|++|++.+..|.. ++ .. ..+..|.++++|++|+|++|+++ .+|..|.++++|++|+|++|+
T Consensus 156 ~L~~n~~~~~~p~~-~~-------~~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~ 217 (328)
T 4fcg_A 156 SIRACPELTELPEP-LA-------ST---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSP 217 (328)
T ss_dssp EEEEETTCCCCCSC-SE-------EE---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSC
T ss_pred ECCCCCCccccChh-Hh-------hc---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCC
Confidence 55555544443331 11 00 11123456899999999999998 667789999999999999999
Q ss_pred CCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCC
Q 047705 170 LEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGG 249 (585)
Q Consensus 170 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 249 (585)
+++ +|..+..+++|++|+|++|.+.+.+|..|.. +++|+.|++++|.+.+.+|..+.+
T Consensus 218 l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~---------------------l~~L~~L~L~~n~~~~~~p~~~~~ 275 (328)
T 4fcg_A 218 LSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGG---------------------RAPLKRLILKDCSNLLTLPLDIHR 275 (328)
T ss_dssp CCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTC---------------------CCCCCEEECTTCTTCCBCCTTGGG
T ss_pred CCc-CchhhccCCCCCEEECcCCcchhhhHHHhcC---------------------CCCCCEEECCCCCchhhcchhhhc
Confidence 995 5557899999999999999988776665444 455566666777777777777888
Q ss_pred CCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccC
Q 047705 250 LKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLS 288 (585)
Q Consensus 250 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 288 (585)
+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 276 l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 276 LTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888877788888888888888887777655
No 102
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=2.7e-29 Score=255.41 Aligned_cols=164 Identities=27% Similarity=0.362 Sum_probs=146.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999876 78999999997643 23456788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999998754 6899999999999999999999 999999999999999999999999999999875321
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
....+||+.|+||
T Consensus 195 ----~~~~~gt~~y~aP 207 (350)
T 1rdq_E 195 ----TWTLCGTPEALAP 207 (350)
T ss_dssp ----BCCCEECGGGCCH
T ss_pred ----cccccCCccccCH
Confidence 2346799999998
No 103
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=3e-29 Score=249.30 Aligned_cols=168 Identities=26% Similarity=0.442 Sum_probs=142.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech---hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 367999999999999999999875 7899999998643 234457889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++|++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999998764 6899999999999999999999 8999999999999999999999999999998653222
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
........||+.|+||
T Consensus 166 -~~~~~~~~gt~~y~aP 181 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSP 181 (294)
T ss_dssp ----------CCSSCCH
T ss_pred -ccccCccccCccccCH
Confidence 1223446799999998
No 104
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.2e-31 Score=284.26 Aligned_cols=310 Identities=21% Similarity=0.188 Sum_probs=244.7
Q ss_pred CCccccCCCCCCEEecCCCcccccCCcccc-CCC----CCCEEecCCCcCCC----cCCccccCCCCCccEEEccCCCCC
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIF-NVS----TLKLLGLQDNSLSG----SLSSITDVRLPNLEELVLWGNNFS 72 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~----~L~~L~L~~n~l~~----~~~~~~~~~l~~L~~L~L~~n~l~ 72 (585)
+|..+..+++|++|+|++|+++...+..+. .++ +|++|+|++|.|+. .++. .+..+++|++|+|++|.++
T Consensus 48 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~ 126 (461)
T 1z7x_W 48 ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS-TLRTLPTLQELHLSDNLLG 126 (461)
T ss_dssp HHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH-HTTSCTTCCEEECCSSBCH
T ss_pred HHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH-HHccCCceeEEECCCCcCc
Confidence 456788899999999999999876555544 355 69999999999973 1222 2347899999999999987
Q ss_pred CCccCcc-----ccCCCCCcEEEccCCCCcccCCc---chhhcccccccEEEeecCcceecCCcccc-----CCCCccEE
Q 047705 73 ELNFLSS-----LSNCKSLTVIGLSNNPLDGILPK---TSIGNLSHSLEDFQMHNCNVTGDIPEEIG-----NLTNLITI 139 (585)
Q Consensus 73 ~~~~~~~-----~~~l~~L~~L~Ls~N~l~~~~~~---~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L 139 (585)
.... .. +...++|++|+|++|++++.... ..+..++. |++|++++|.++...+..+. .+++|++|
T Consensus 127 ~~~~-~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~-L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L 204 (461)
T 1z7x_W 127 DAGL-QLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD-FKELTVSNNDINEAGVRVLCQGLKDSPCQLEAL 204 (461)
T ss_dssp HHHH-HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTT-CCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEE
T ss_pred hHHH-HHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCC-CCEEECcCCCcchHHHHHHHHHHhcCCCCceEE
Confidence 6432 22 33467899999999999864321 13445565 99999999999876555553 36799999
Q ss_pred EeeCCccccc----cchhhhCCCCCceEEccCCCCCccC-----cccccCCCCCcEEEcCCCccccc----CcccccCcc
Q 047705 140 DLGGNKLNGS----ILITLSKLQKLQGLVLDDNKLEGSI-----PDDICRLVELYKLELGGNKLSRS----IPACFNNLI 206 (585)
Q Consensus 140 ~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~ 206 (585)
+|++|.+++. .+..+..+++|++|++++|.+++.. +..+..+++|++|++++|.++.. ++..+..++
T Consensus 205 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 284 (461)
T 1z7x_W 205 KLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKE 284 (461)
T ss_dssp ECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCT
T ss_pred EccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCC
Confidence 9999999874 4777888999999999999998643 23334689999999999999864 566778899
Q ss_pred cchhhcCCCCCCCCc---cC-----CCCCCCcEEEccCCccccc----CCcccCCCCCCcEEeecccCcccccCccccC-
Q 047705 207 ALRILSLGSNDPLPL---EI-----GNLKVLVGIDFSMNNFSGI----IPKEIGGLKNLEYLFLGYNRLQGLIPDSFGN- 273 (585)
Q Consensus 207 ~L~~L~l~~n~~~~~---~~-----~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~- 273 (585)
+|++|++++|..... .+ ...++|+.|++++|.+++. .+..+..+++|++|++++|++++..+..+..
T Consensus 285 ~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 364 (461)
T 1z7x_W 285 SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQG 364 (461)
T ss_dssp TCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHH
T ss_pred CcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHH
Confidence 999999999973211 12 2336999999999999875 4556777899999999999998776655543
Q ss_pred ----cCCCCEEeCCCCccCc----cCChhhccCCccceEEeecCcCeee
Q 047705 274 ----LISLKFLNLSNNNLSG----AIPASLEKLSYLEDLNLSFNKLEGE 314 (585)
Q Consensus 274 ----l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~~~ 314 (585)
.++|+.|++++|++++ .+|..+..+++|++|++++|+++..
T Consensus 365 l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 365 LGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 6799999999999996 7788889999999999999998754
No 105
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=3.4e-29 Score=250.95 Aligned_cols=168 Identities=27% Similarity=0.386 Sum_probs=144.6
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|++.+++.||+|++.... ......+.+|++++++++||||+++++++..++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 347899999999999999999999889999999987542 223467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++ ++.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 99974 888888877667999999999999999999999 8999999999999999999999999999998753221
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 174 -~~~~~~~~t~~y~aP 188 (311)
T 3niz_A 174 -RSYTHEVVTLWYRAP 188 (311)
T ss_dssp -C---CCCCCCTTCCH
T ss_pred -ccccCCcccCCcCCH
Confidence 223446789999998
No 106
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=1.9e-29 Score=254.69 Aligned_cols=182 Identities=40% Similarity=0.589 Sum_probs=157.3
Q ss_pred cccccCHHHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhh-hhHHHHHHHHHHHHhcCCCcceeEEee
Q 047705 400 MWRTFSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDVECEIMKSIRHRNLIKVISS 478 (585)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 478 (585)
....+++.++....++|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3457899999999999999999999999999999987899999999875432 223468899999999999999999999
Q ss_pred eecCCeEEEEEEccCCCCHHHHhhcCCC---CCCHHHHHHHHHHHHHHHHHHhcCCCC---CcEEcCCCCCCEEeCCCCc
Q 047705 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNC---ILDIFQRLNIMIDVASALEYLHFGCST---PVIHCDLKPSNVLLDDNMI 552 (585)
Q Consensus 479 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~---~iiH~dlkp~NIll~~~~~ 552 (585)
+...+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCC
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCC
Confidence 9999999999999999999999986532 4899999999999999999999 66 9999999999999999999
Q ss_pred EEEeeecccccccCCCCccccccccccccccCC
Q 047705 553 AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 553 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+||+|||+++...... ........||+.|+||
T Consensus 173 ~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aP 204 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAP 204 (326)
T ss_dssp EEECCCSSCEECCSSS-SCEECCCCSCGGGCCH
T ss_pred EEeccCccccccCccc-ccccccccCCcCccCH
Confidence 9999999998754322 2233455699999998
No 107
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.4e-30 Score=261.76 Aligned_cols=249 Identities=23% Similarity=0.204 Sum_probs=205.4
Q ss_pred cccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCC
Q 047705 5 EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCK 84 (585)
Q Consensus 5 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 84 (585)
.+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++.++ +..+++|++|+|++|+++.++. .+
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~~------~~ 99 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLV------GP 99 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEEE------CT
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccccC------CC
Confidence 34566799999999999998888999999999999999999986554 5589999999999999988763 38
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhh-CCCCCceE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLS-KLQKLQGL 163 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L 163 (585)
+|++|++++|+++++.+. .++ +|++|++++|.+++..+..|..+++|++|+|++|.+.+..+..+. .+++|++|
T Consensus 100 ~L~~L~l~~n~l~~~~~~----~~~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 100 SIETLHAANNNISRVSCS----RGQ-GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TCCEEECCSSCCSEEEEC----CCS-SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CcCEEECCCCccCCcCcc----ccC-CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 999999999999877554 234 499999999999999898999999999999999999988887774 79999999
Q ss_pred EccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccC
Q 047705 164 VLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGII 243 (585)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~ 243 (585)
+|++|+|++. + ....+++|++|+|++|.+++..+ .|.. +++|+.|++++|++++ +
T Consensus 175 ~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~---------------------l~~L~~L~L~~N~l~~-l 229 (317)
T 3o53_A 175 NLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQS---------------------AAGVTWISLRNNKLVL-I 229 (317)
T ss_dssp ECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGG---------------------GTTCSEEECTTSCCCE-E
T ss_pred ECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhcc---------------------cCcccEEECcCCcccc-h
Confidence 9999999966 3 33458999999999999985433 2444 4556666777777774 4
Q ss_pred CcccCCCCCCcEEeecccCcc-cccCccccCcCCCCEEeCCCC-ccCccCC
Q 047705 244 PKEIGGLKNLEYLFLGYNRLQ-GLIPDSFGNLISLKFLNLSNN-NLSGAIP 292 (585)
Q Consensus 244 ~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N-~l~~~~~ 292 (585)
|..+..+++|+.|++++|+++ +..|.++..+++|+.|++++| .+++..|
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 666788888888888888887 667778888888888888844 4555443
No 108
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=4.4e-29 Score=251.69 Aligned_cols=169 Identities=29% Similarity=0.481 Sum_probs=143.8
Q ss_pred CCCCccceecccCceEEEEEEeC----CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
++|++.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|+++++.++||||+++++++...+..|+|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56889999999999999999874 3456999999754 334557889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999877668999999999999999999999 8999999999999999999999999999998764322
Q ss_pred C-ccccccccccccccCC
Q 047705 569 Q-SMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~-~~~~~~~~gt~~y~aP 585 (585)
. ........+|+.|+||
T Consensus 206 ~~~~~~~~~~~t~~y~aP 223 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAP 223 (325)
T ss_dssp -CCEECC---CCGGGSCH
T ss_pred cceeeccCCCCcccccCH
Confidence 1 1222344568889998
No 109
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=257.07 Aligned_cols=168 Identities=20% Similarity=0.241 Sum_probs=143.9
Q ss_pred hcCCCCccceecccCceEEEEEE------eCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcC---CCcceeEEeeeecC
Q 047705 412 ATDGFSENNLIGRGGFGSVYKAR------LGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR---HRNLIKVISSCSNE 482 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 482 (585)
..++|.+.+.||+|+||.||+|. ..+++.||+|+++... ...+..|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34679999999999999999994 3468899999987543 346677888888886 99999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---------
Q 047705 483 EFKGLVLEYMPQGSLEKHLYS----TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD--------- 549 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~--------- 549 (585)
+..|+||||+++|+|.+++.. ....+++..++.++.||+.||+||| +++|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999975 2346899999999999999999999 999999999999999998
Q ss_pred --CCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 550 --NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 550 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++.+||+|||+|+.+............+||+.||||
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 254 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV 254 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence 899999999999865433333344567899999998
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=6.1e-29 Score=251.37 Aligned_cols=170 Identities=25% Similarity=0.415 Sum_probs=141.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC-------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------- 483 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 483 (585)
.++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||++++++|...+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457999999999999999999986 79999999997543 335578899999999999999999999885443
Q ss_pred --------------------------------------------------eEEEEEEccCCCCHHHHhhcCCC--CCCHH
Q 047705 484 --------------------------------------------------FKGLVLEYMPQGSLEKHLYSTNC--ILDIF 511 (585)
Q Consensus 484 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~ 511 (585)
..++|||||++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999987543 34566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc----------ccccccccccc
Q 047705 512 QRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS----------MTQTQTLATIG 581 (585)
Q Consensus 512 ~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt~~ 581 (585)
.++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........ ......+||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78899999999999999 899999999999999999999999999999876533211 12244679999
Q ss_pred ccCC
Q 047705 582 YMAP 585 (585)
Q Consensus 582 y~aP 585 (585)
|+||
T Consensus 242 y~aP 245 (332)
T 3qd2_B 242 YMSP 245 (332)
T ss_dssp GSCH
T ss_pred ccCh
Confidence 9998
No 111
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=8.6e-29 Score=254.87 Aligned_cols=167 Identities=23% Similarity=0.354 Sum_probs=147.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++...+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999876 7899999999866555566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC--CCCcEEEeeecccccccCCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD--DNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++ .++.+||+|||+|+......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667899999999999999999999 89999999999999997 45789999999998764322
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.....+||+.|+||
T Consensus 206 --~~~~~~gt~~y~aP 219 (387)
T 1kob_A 206 --IVKVTTATAEFAAP 219 (387)
T ss_dssp --CEEEECSSGGGCCH
T ss_pred --ceeeeccCCCccCc
Confidence 22345799999998
No 112
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=8.5e-29 Score=245.82 Aligned_cols=166 Identities=27% Similarity=0.372 Sum_probs=144.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999876 68999999997542 2344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++ ++.+.+......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+..... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--V 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--C
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--c
Confidence 9965 777777665667999999999999999999999 899999999999999999999999999999865322 2
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 156 ~~~~~~~~t~~y~aP 170 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPP 170 (292)
T ss_dssp SCCCSCCSCGGGCCH
T ss_pred ccccCCccccCCcCh
Confidence 223456789999998
No 113
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=4.9e-29 Score=251.14 Aligned_cols=166 Identities=28% Similarity=0.407 Sum_probs=143.2
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC----eEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE----FKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. ++.||||++..... .......|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367999999999999999999875 78999999975533 3345566899999999999999999987743 47999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CcEEcCCCCCCEEeCCCCcEEEeee
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST----------PVIHCDLKPSNVLLDDNMIAYLSDF 558 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~----------~iiH~dlkp~NIll~~~~~~kl~Df 558 (585)
|||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999999875 4899999999999999999999 78 9999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCC
Q 047705 559 GIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+|+...............||+.|+||
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aP 202 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAP 202 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred CcccccccccCccccccCccCccccCH
Confidence 999876544333334456899999998
No 114
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=4.2e-29 Score=252.12 Aligned_cols=167 Identities=28% Similarity=0.424 Sum_probs=136.3
Q ss_pred cCCCCccceecccCceEEEEEEe----CCCcEEEEEEEechh----hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 478999999987542 2334567889999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+||||++|++|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999998654 6888999999999999999999 899999999999999999999999999999864
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... ......+||+.|+||
T Consensus 172 ~~~~--~~~~~~~gt~~y~aP 190 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAP 190 (327)
T ss_dssp ---------CTTSSCCTTSCH
T ss_pred ccCC--ccccccCCCcCccCH
Confidence 3221 123456799999998
No 115
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=260.00 Aligned_cols=168 Identities=24% Similarity=0.381 Sum_probs=145.4
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4467999999999999999999865 78999999987542 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC---CCCcEEEeeeccccccc
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD---DNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 565 (585)
||||+||+|.+.+.... .+++..+..++.||+.||+||| +++|+||||||+||+++ +++.+||+|||+|+...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999998764 6899999999999999999999 89999999999999998 56789999999998764
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......+||+.||||
T Consensus 165 ~~~--~~~~~~~gt~~Y~AP 182 (444)
T 3soa_A 165 GEQ--QAWFGFAGTPGYLSP 182 (444)
T ss_dssp TTC--CBCCCSCSCGGGCCH
T ss_pred CCC--ceeecccCCcccCCH
Confidence 322 223456899999998
No 116
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.96 E-value=5.2e-29 Score=253.93 Aligned_cols=167 Identities=24% Similarity=0.373 Sum_probs=143.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh-----hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-----RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
+.|++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+.+++.++||||+++++++..++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56999999999999999999875 789999999975421 135678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc---EEEeeeccc
Q 047705 488 VLEYMPQGSLEKHLYST---NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI---AYLSDFGIA 561 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~a 561 (585)
|||||+|++|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887643 235889999999999999999999 899999999999999986554 999999999
Q ss_pred ccccCCCCccccccccccccccCC
Q 047705 562 KLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+...... ......+||+.|+||
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aP 202 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAP 202 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCH
T ss_pred eEecCCC--eeecCCcCCcCccCH
Confidence 8764322 223456799999998
No 117
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=6.4e-29 Score=250.96 Aligned_cols=166 Identities=25% Similarity=0.388 Sum_probs=145.4
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++..++..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3478999999999999999999874 78999999997542 2234578899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+ +|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++.....
T Consensus 87 v~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 789999887654 6899999999999999999999 899999999999999999999999999999865432
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
......+||+.|+||
T Consensus 162 ---~~~~~~~gt~~y~aP 176 (336)
T 3h4j_B 162 ---NFLKTSCGSPNYAAP 176 (336)
T ss_dssp ---BTTCCCTTSTTTSCG
T ss_pred ---cccccccCCcCcCCH
Confidence 223456799999998
No 118
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.1e-30 Score=258.60 Aligned_cols=243 Identities=19% Similarity=0.226 Sum_probs=165.5
Q ss_pred CCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCccc-CCcchhh-------cccccccEEEeecCcceecCCcc
Q 047705 58 LPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGI-LPKTSIG-------NLSHSLEDFQMHNCNVTGDIPEE 129 (585)
Q Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~-------~~~~~L~~L~l~~n~l~~~~~~~ 129 (585)
.++|++|++++|.+ .+| ..+... |++|+|++|++... .+. ... +++. |++|+|++|++++.+|..
T Consensus 42 ~~~L~~l~l~~n~l-~~p--~~~~~~--L~~L~L~~n~l~~~~~~~-~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE-ADL--GQFTDI--IKSLSLKRLTVRAARIPS-RILFGALRVLGISG-LQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEECTTHHHHCCTT-CCC--HHHHHH--HHHCCCCEEEEEEEECBH-HHHHHHHHHHTTSC-CCEEEEEEEBCBSCCCCC
T ss_pred CCCceeEeeccccc-ccH--HHHHHH--HhhcccccccccCCCcCH-HHHHHHHHhcCcCC-ccEEEccCCcccchhHHH
Confidence 44566666666666 444 222222 56666666666432 222 222 3333 666666666666666655
Q ss_pred c--cCCCCccEEEeeCCccccccchhhhCC-----CCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccccc--Ccc
Q 047705 130 I--GNLTNLITIDLGGNKLNGSILITLSKL-----QKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRS--IPA 200 (585)
Q Consensus 130 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~ 200 (585)
+ ..+++|++|+|++|++.+. |..|..+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 6677777777777777765 5666655 6777777777777766667777777777777777776543 222
Q ss_pred cc--cCcccchhhcCCCCCCC--C----ccCCCCCCCcEEEccCCcccccCC-cccCCCCCCcEEeecccCcccccCccc
Q 047705 201 CF--NNLIALRILSLGSNDPL--P----LEIGNLKVLVGIDFSMNNFSGIIP-KEIGGLKNLEYLFLGYNRLQGLIPDSF 271 (585)
Q Consensus 201 ~~--~~l~~L~~L~l~~n~~~--~----~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~ 271 (585)
.+ ..+++|++|++++|... + ..+..+++|+.|++++|.+++..| ..+..+++|++|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 22 66777777777777633 1 113467889999999999988764 45677899999999999998 567666
Q ss_pred cCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCee
Q 047705 272 GNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEG 313 (585)
Q Consensus 272 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 313 (585)
. ++|+.|++++|+|++. |. +..+++|++|++++|+|++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 8899999999999976 55 8889999999999999874
No 119
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=2.4e-28 Score=244.38 Aligned_cols=181 Identities=35% Similarity=0.555 Sum_probs=157.2
Q ss_pred ccccCHHHHHHhcCCCCcc------ceecccCceEEEEEEeCCCcEEEEEEEech----hhhhHHHHHHHHHHHHhcCCC
Q 047705 401 WRTFSYLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVKVFNLQ----CRRAFKSFDVECEIMKSIRHR 470 (585)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~ 470 (585)
...|++.++..++++|... +.||+|+||.||+|+. +++.||+|++... .....+.+.+|+++++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999998877 8999999999999987 6789999998643 233457788999999999999
Q ss_pred cceeEEeeeecCCeEEEEEEccCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC
Q 047705 471 NLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYST--NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD 548 (585)
Q Consensus 471 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~ 548 (585)
||+++++++...+..++||||+++++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998743 236889999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 549 DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 549 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.++.+||+|||+++...............||+.|+||
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP 204 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP 204 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCCh
Confidence 9999999999999875433333333456799999998
No 120
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=5.2e-29 Score=244.22 Aligned_cols=168 Identities=26% Similarity=0.417 Sum_probs=147.6
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357899999999999999999988889999999975432 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccc
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 572 (585)
++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc-cccc
Confidence 999999999877767899999999999999999999 899999999999999999999999999999865322 1122
Q ss_pred cccccccccccCC
Q 047705 573 QTQTLATIGYMAP 585 (585)
Q Consensus 573 ~~~~~gt~~y~aP 585 (585)
.....||+.|+||
T Consensus 164 ~~~~~~~~~y~aP 176 (269)
T 4hcu_A 164 STGTKFPVKWASP 176 (269)
T ss_dssp TTSTTCCGGGCCH
T ss_pred ccCcccccccCCH
Confidence 3445678889998
No 121
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=9.6e-29 Score=252.81 Aligned_cols=166 Identities=25% Similarity=0.482 Sum_probs=145.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999876 68999999997542 344567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC---CcEEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~ 566 (585)
||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.+ +.+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999987654 6899999999999999999999 8999999999999999854 4599999999987542
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
.. .....+||+.|+||
T Consensus 184 ~~---~~~~~~gt~~y~aP 199 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSP 199 (362)
T ss_dssp CC---SCCCSCSCTTTCCH
T ss_pred Cc---ccccCCCCccccCH
Confidence 21 22456899999998
No 122
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=4.2e-29 Score=255.94 Aligned_cols=167 Identities=32% Similarity=0.423 Sum_probs=137.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHH-HHhcCCCcceeEEeeeecCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEI-MKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ......+..|..+ ++.++||||+++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999876 68899999997653 2233456667766 567899999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+|+.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999998754 6888999999999999999999 899999999999999999999999999999864322
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ......+||+.||||
T Consensus 193 ~--~~~~~~~gt~~y~aP 208 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAP 208 (373)
T ss_dssp C--CCCCSBSCCCCCCCH
T ss_pred C--CccccccCCccccCH
Confidence 2 233457899999998
No 123
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=4.4e-29 Score=247.38 Aligned_cols=166 Identities=27% Similarity=0.390 Sum_probs=142.2
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
++|++.+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5799999999999999999998889999999986542 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
+++ +|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 975 999999876667899999999999999999999 8999999999999999999999999999998653221 1
Q ss_pred ccccccccccccCC
Q 047705 572 TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 156 KYTHEIVTLWYRAP 169 (288)
T ss_dssp ------CCCTTCCH
T ss_pred ccccccccccccCc
Confidence 22445789999998
No 124
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2.2e-29 Score=267.61 Aligned_cols=234 Identities=21% Similarity=0.169 Sum_probs=143.0
Q ss_pred CCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccE
Q 047705 35 TLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLED 114 (585)
Q Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 114 (585)
+|++|+|++|.|++.+ ...+..+++|++|+|++|.++..+. |..+++|++|+|++|.|+++.+. + +|++
T Consensus 35 ~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~------~-~L~~ 103 (487)
T 3oja_A 35 NVKELDLSGNPLSQIS-AADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVG------P-SIET 103 (487)
T ss_dssp GCCEEECCSSCCCCCC-GGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEEC------T-TCCE
T ss_pred CccEEEeeCCcCCCCC-HHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCC------C-CcCE
Confidence 6667777777666333 2333456666666666666665432 66666666666666666543221 2 2666
Q ss_pred EEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCccccc-CCCCCcEEEcCCCc
Q 047705 115 FQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDIC-RLVELYKLELGGNK 193 (585)
Q Consensus 115 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~ 193 (585)
|++++|.+++..+. .+++|++|+|++|.+.+..|..|.++++|++|+|++|.|++..|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 66666666554443 235556666666666555555555556666666666666555555544 45556666666655
Q ss_pred ccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccC
Q 047705 194 LSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGN 273 (585)
Q Consensus 194 l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 273 (585)
|++.. ....+++|+.|+|++|.+++..| .|..+++|+.|+|++|.+++ +|..+..
T Consensus 181 l~~~~-----------------------~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 181 IYDVK-----------------------GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp CCEEE-----------------------CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ccccc-----------------------ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 55321 12235667777777777776444 37777777777777777775 4666777
Q ss_pred cCCCCEEeCCCCccC-ccCChhhccCCccceEEee
Q 047705 274 LISLKFLNLSNNNLS-GAIPASLEKLSYLEDLNLS 307 (585)
Q Consensus 274 l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~ 307 (585)
+++|+.|++++|+++ +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 777777777777776 5566666777777766665
No 125
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=9e-29 Score=246.39 Aligned_cols=167 Identities=28% Similarity=0.407 Sum_probs=140.1
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh--------------------------hhHHHHHHHHHHH
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR--------------------------RAFKSFDVECEIM 464 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l 464 (585)
..++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3578999999999999999999875 688999999865421 1235688999999
Q ss_pred HhcCCCcceeEEeeeec--CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCC
Q 047705 465 KSIRHRNLIKVISSCSN--EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKP 542 (585)
Q Consensus 465 ~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp 542 (585)
++++||||+++++++.. .+..|+||||+++++|.+++.. ..+++..+..++.|++.||+||| +++|+||||||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp 165 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKP 165 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence 99999999999999986 5688999999999999887644 36899999999999999999999 89999999999
Q ss_pred CCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 543 SNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 543 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+||+++.++.+||+|||+++...... .......||+.|+||
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aP 206 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAP 206 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCG
T ss_pred HHEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccCh
Confidence 99999999999999999998764322 223456799999998
No 126
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=1.1e-28 Score=263.72 Aligned_cols=167 Identities=28% Similarity=0.425 Sum_probs=147.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999876 79999999997642 23346678899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 489 LEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|||++||+|.+++..... .+++..++.++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999976542 5899999999999999999999 899999999999999999999999999999875422
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. .....+||+.||||
T Consensus 340 ~---~~~~~~GT~~Y~AP 354 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAP 354 (576)
T ss_dssp C---CEECCCSCGGGCCH
T ss_pred c---cccccCCCccccCH
Confidence 2 23446899999998
No 127
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=1e-28 Score=241.97 Aligned_cols=168 Identities=27% Similarity=0.404 Sum_probs=147.9
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
.++|++.+.||+|+||.||+|+++++..||+|+++.... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467999999999999999999998888999999975532 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccc
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 572 (585)
++++|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++...... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999876656899999999999999999999 8999999999999999999999999999998654322 223
Q ss_pred cccccccccccCC
Q 047705 573 QTQTLATIGYMAP 585 (585)
Q Consensus 573 ~~~~~gt~~y~aP 585 (585)
.....||+.|+||
T Consensus 162 ~~~~~~~~~y~aP 174 (268)
T 3sxs_A 162 SVGTKFPVKWSAP 174 (268)
T ss_dssp CCSCCCCGGGCCH
T ss_pred ccCCCcCcccCCH
Confidence 3445677889998
No 128
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=5e-29 Score=249.38 Aligned_cols=173 Identities=30% Similarity=0.480 Sum_probs=138.9
Q ss_pred HHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 407 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
.++....++|++.+.||+|+||.||+|++ +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34444557899999999999999999987 67899999987542 3345678899999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeCCCCcEEEeeecc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLDDNMIAYLSDFGI 560 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~~~~~~kl~Dfg~ 560 (585)
.++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++ |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 9999999999999999987542 3889999999999999999999 888 99999999999999999999999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++..... ........||+.|+||
T Consensus 186 a~~~~~~--~~~~~~~~gt~~y~aP 208 (309)
T 3p86_A 186 SRLKAST--FLSSKSAAGTPEWMAP 208 (309)
T ss_dssp ------------------CCTTSCH
T ss_pred Ccccccc--ccccccCCCCccccCh
Confidence 9854322 1223456799999998
No 129
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=3.1e-29 Score=258.16 Aligned_cols=171 Identities=27% Similarity=0.411 Sum_probs=146.0
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++..++..|+||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3467889999999999999999986 78999999987542 234467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876657899999999999999999999 89999999999999999999999999999986432211
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
........+++.|+||
T Consensus 269 ~~~~~~~~~~~~y~aP 284 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAP 284 (377)
T ss_dssp ECCSSCCEEEGGGSCH
T ss_pred eecCCCCCCCcCcCCH
Confidence 1111223457789998
No 130
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=248.41 Aligned_cols=165 Identities=27% Similarity=0.379 Sum_probs=145.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh------hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR------RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
+.|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46899999999999999999876 689999999975422 13567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC----cEEEeeecccc
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAK 562 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~a~ 562 (585)
+||||+++++|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999997654 6899999999999999999999 89999999999999998877 89999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
...... ......||+.|+||
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aP 186 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAP 186 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCH
T ss_pred ECCCCC---ccccccCCcCcCCc
Confidence 754222 22446799999998
No 131
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=5.9e-29 Score=254.58 Aligned_cols=181 Identities=24% Similarity=0.395 Sum_probs=151.8
Q ss_pred cccCHHHHHHhcCCCCccceecccCceEEEEEEe------CCCcEEEEEEEechh-hhhHHHHHHHHHHHHhc-CCCcce
Q 047705 402 RTFSYLELCRATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRNLI 473 (585)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 473 (585)
..+...++....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 3455666777788999999999999999999973 246889999997642 33456789999999999 789999
Q ss_pred eEEeeeecCC-eEEEEEEccCCCCHHHHhhcCCC----------------------------------------------
Q 047705 474 KVISSCSNEE-FKGLVLEYMPQGSLEKHLYSTNC---------------------------------------------- 506 (585)
Q Consensus 474 ~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------- 506 (585)
++++++...+ ..++||||+++|+|.+++.....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999988765 48999999999999999976532
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 507 -------------------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 507 -------------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
.+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 1888999999999999999999 899999999999999999999999999999876444
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
..........||+.||||
T Consensus 247 ~~~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTCEEC--CEECGGGCCH
T ss_pred ccchhccccCCCceeECh
Confidence 333344566789999998
No 132
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.7e-28 Score=261.77 Aligned_cols=168 Identities=30% Similarity=0.450 Sum_probs=147.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+..|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999976 69999999997643 23346788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 489 LEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 36899999999999999999999 8999999999999999999999999999998754
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......+||+.||||
T Consensus 341 ~~~--~~~~~~~GT~~Y~AP 358 (543)
T 3c4z_A 341 AGQ--TKTKGYAGTPGFMAP 358 (543)
T ss_dssp TTC--CCBCCCCSCTTTSCH
T ss_pred CCC--cccccccCCccccCh
Confidence 322 122346899999998
No 133
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=2e-28 Score=258.14 Aligned_cols=166 Identities=29% Similarity=0.431 Sum_probs=147.4
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh---hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|.+.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+++++.++||||+++++++...+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999876 799999999976432 2356788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999997654 6899999999999999999999 9999999999999999999999999999998754321
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.....+||+.|+||
T Consensus 171 ---~~~~~~gt~~y~aP 184 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAP 184 (476)
T ss_dssp ---CBCCCCSCSTTCCH
T ss_pred ---cccccCCCcCeECh
Confidence 23456799999998
No 134
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=7e-30 Score=256.02 Aligned_cols=250 Identities=22% Similarity=0.232 Sum_probs=131.8
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCc-CCccc------cCCCCCccEEEccCCCCCC-CccCcc
Q 047705 8 NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGS-LSSIT------DVRLPNLEELVLWGNNFSE-LNFLSS 79 (585)
Q Consensus 8 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~------~~~l~~L~~L~L~~n~l~~-~~~~~~ 79 (585)
..++|+.|++++|.+ .+|..+... |++|+|++|.++.. ++... +..+++|++|+|++|+++. +|. ..
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~ 115 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP-PL 115 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC-CS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH-HH
Confidence 334455555555555 344444432 55555555555311 11110 0024555555555555542 221 11
Q ss_pred c-cCCCCCcEEEccCCCCcccCCcchhhccc----ccccEEEeecCcceecCCccccCCCCccEEEeeCCccccc--cch
Q 047705 80 L-SNCKSLTVIGLSNNPLDGILPKTSIGNLS----HSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGS--ILI 152 (585)
Q Consensus 80 ~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~ 152 (585)
| ..+++|++|+|++|++++. |. .++.++ .+|++|++++|++++..+..|+.+++|++|+|++|++.+. .+.
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 1 4555555555555555544 32 333331 2255555555555444444444455555555555544332 111
Q ss_pred hh--hCCCCCceEEccCCCCCcc---CcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCC
Q 047705 153 TL--SKLQKLQGLVLDDNKLEGS---IPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLK 227 (585)
Q Consensus 153 ~~--~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~ 227 (585)
.+ ..+++|++|+|++|+|++. ....+..+++|++|+|++|.+++..|. ..+..++
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------------------~~~~~l~ 253 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA--------------------PSCDWPS 253 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC--------------------SCCCCCT
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch--------------------hhhhhcC
Confidence 22 4444445555554444411 112223344444444444444432211 2345567
Q ss_pred CCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCc
Q 047705 228 VLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSG 289 (585)
Q Consensus 228 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 289 (585)
+|+.|++++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|++++|++++
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8888889999998 5666665 8899999999999976 55 8889999999999999885
No 135
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.95 E-value=8.6e-29 Score=254.23 Aligned_cols=169 Identities=27% Similarity=0.494 Sum_probs=135.2
Q ss_pred CCCCccceecccCceEEEEEEeC----CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
++|++.+.||+|+||.||+|++. ++..||||+++.. .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57999999999999999999864 4678999998754 334557899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999887667999999999999999999999 8999999999999999999999999999998764322
Q ss_pred Cc-cccccccccccccCC
Q 047705 569 QS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~-~~~~~~~gt~~y~aP 585 (585)
.. .......+|+.|+||
T Consensus 202 ~~~~~~~~~~~~~~y~aP 219 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSP 219 (373)
T ss_dssp ------------CTTSCH
T ss_pred ccceeccCCCcCCCccCh
Confidence 11 112233467889998
No 136
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-27 Score=257.39 Aligned_cols=255 Identities=24% Similarity=0.262 Sum_probs=212.3
Q ss_pred CCCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 1 EIPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 1 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+||..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|.|++ ++. .+++|++|+|++|+|+.+|.
T Consensus 54 ~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~l~~---- 118 (622)
T 3g06_A 54 TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV----LPPGLLELSIFSNPLTHLPA---- 118 (622)
T ss_dssp CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC----CCTTCCEEEECSCCCCCCCC----
T ss_pred ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC----CCCCCCEEECcCCcCCCCCC----
Confidence 4677776 89999999999998 4555 67899999999999984 443 57999999999999999873
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 160 (585)
.+++|++|++++|+++.+.+. + .+|++|++++|++++. |. .+++|+.|++++|.++++. ..+++|
T Consensus 119 -~l~~L~~L~L~~N~l~~lp~~-----l-~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l~----~~~~~L 183 (622)
T 3g06_A 119 -LPSGLCKLWIFGNQLTSLPVL-----P-PGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTSLP----MLPSGL 183 (622)
T ss_dssp -CCTTCCEEECCSSCCSCCCCC-----C-TTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCCC----CCCTTC
T ss_pred -CCCCcCEEECCCCCCCcCCCC-----C-CCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCCCc----ccCCCC
Confidence 578999999999999865432 2 4599999999999864 33 3578999999999999644 567899
Q ss_pred ceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCccc
Q 047705 161 QGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFS 240 (585)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~ 240 (585)
+.|++++|+|+++ |. .+++|+.|++++|.++. +|.. +++|+.|++++|...... ..+++|+.|++++|.++
T Consensus 184 ~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~lp-~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 184 QELSVSDNQLASL-PT---LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLP-VLPSELKELMVSGNRLT 254 (622)
T ss_dssp CEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC-CCCTTCCEEECCSSCCS
T ss_pred cEEECCCCCCCCC-CC---ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcCC-CCCCcCcEEECCCCCCC
Confidence 9999999999954 43 24789999999999984 4443 478999999999833222 56789999999999999
Q ss_pred ccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCC
Q 047705 241 GIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLS 299 (585)
Q Consensus 241 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 299 (585)
++ |. .+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..|..+..++
T Consensus 255 ~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 255 SL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 54 44 5789999999999999 5688899999999999999999999888877665
No 137
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.95 E-value=1.8e-28 Score=251.78 Aligned_cols=162 Identities=24% Similarity=0.428 Sum_probs=138.5
Q ss_pred ccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEccCCCC
Q 047705 418 ENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQGS 496 (585)
Q Consensus 418 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 496 (585)
..+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3578999999999999875 789999999987655566789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe--CCCCcEEEeeecccccccCCCCccccc
Q 047705 497 LEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL--DDNMIAYLSDFGIAKLLIGEDQSMTQT 574 (585)
Q Consensus 497 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 574 (585)
|.+++......+++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||+|||+++...... ...
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~ 246 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLK 246 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---ccc
Confidence 99999876667899999999999999999999 8999999999999999 677899999999998764322 223
Q ss_pred cccccccccCC
Q 047705 575 QTLATIGYMAP 585 (585)
Q Consensus 575 ~~~gt~~y~aP 585 (585)
..+||+.|+||
T Consensus 247 ~~~gt~~y~aP 257 (373)
T 2x4f_A 247 VNFGTPEFLAP 257 (373)
T ss_dssp CCCSSCTTCCH
T ss_pred cccCCCcEeCh
Confidence 45799999998
No 138
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=1.1e-28 Score=260.96 Aligned_cols=168 Identities=24% Similarity=0.352 Sum_probs=131.4
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC-----Ce
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 484 (585)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+++++.++||||+++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999876 7899999998653 233457788999999999999999999998433 57
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+||||+ +++|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 579999987654 6899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCc-------------------------cccccccccccccCC
Q 047705 565 IGEDQS-------------------------MTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~-------------------------~~~~~~~gt~~y~aP 585 (585)
...... ......+||++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 252 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccCh
Confidence 422110 123456899999998
No 139
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=8.9e-29 Score=251.53 Aligned_cols=174 Identities=28% Similarity=0.440 Sum_probs=147.5
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC------CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeec
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 481 (585)
+....++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999864 34789999987543 3345778999999999999999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEc
Q 047705 482 EEFKGLVLEYMPQGSLEKHLYSTN-----------------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538 (585)
Q Consensus 482 ~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~ 538 (585)
.+..|+||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 999999999999999999998642 46889999999999999999999 8999999
Q ss_pred CCCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 539 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 245 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence 99999999999999999999999876433222233456789999998
No 140
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.95 E-value=6.2e-29 Score=247.16 Aligned_cols=170 Identities=29% Similarity=0.469 Sum_probs=142.5
Q ss_pred cCCCCccceecccCceEEEEEEe-----CCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC--CeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 485 (585)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36799999999999999999984 26889999999876666677899999999999999999999998654 468
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
++||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887667899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 047705 566 GEDQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~-~~~~~~~gt~~y~aP 585 (585)
..... .......||+.|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aP 186 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAP 186 (295)
T ss_dssp ----------CTTCGGGGCCH
T ss_pred CCcceeeeccCCCCccceeCc
Confidence 32221 122344578889998
No 141
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=1.7e-28 Score=246.60 Aligned_cols=168 Identities=26% Similarity=0.387 Sum_probs=130.2
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..|+||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3468999999999999999999875 68999999997543 223467888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 490 EYMPQGSLEKHLYSTN-----CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
||++ |+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 59999886532 35889999999999999999999 899999999999999999999999999999875
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .......||+.|+||
T Consensus 159 ~~~~--~~~~~~~~t~~y~aP 177 (317)
T 2pmi_A 159 GIPV--NTFSSEVVTLWYRAP 177 (317)
T ss_dssp TSCC--CCCCCCCSCCTTCCH
T ss_pred CCCc--ccCCCCcccccccCc
Confidence 3221 122445789999998
No 142
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95 E-value=5.6e-29 Score=262.18 Aligned_cols=167 Identities=28% Similarity=0.369 Sum_probs=137.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ......+..|+++++.++||||+++++++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 78999999998642 23345677899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCS-TPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999997654 6899999999999999999999 7 89999999999999999999999999999864322
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
.......+||+.||||
T Consensus 303 --~~~~~~~~gt~~y~aP 318 (446)
T 4ejn_A 303 --GATMKTFCGTPEYLAP 318 (446)
T ss_dssp ------CCSSSCGGGCCH
T ss_pred --CcccccccCCccccCH
Confidence 2233457899999998
No 143
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=252.51 Aligned_cols=170 Identities=28% Similarity=0.440 Sum_probs=146.4
Q ss_pred cCCCCccceecccCceEEEEEEeC--------CCcEEEEEEEech-hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecC
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 482 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 482 (585)
.++|.+.+.||+|+||.||+|++. ++..||+|+++.. .....+.+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 367899999999999999999852 2357999999754 234457788999999999 999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTN---------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998754 25899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+|+...............||+.|+||
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 262 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence 99999999999999876433322334455688999998
No 144
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95 E-value=1.8e-28 Score=250.85 Aligned_cols=166 Identities=25% Similarity=0.315 Sum_probs=137.2
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3468999999999999999999976 789999999975432 33667899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc--EEEeeecccccccCCC
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI--AYLSDFGIAKLLIGED 568 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~ 568 (585)
|+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+|+....
T Consensus 97 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-- 170 (361)
T 3uc3_A 97 YASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-- 170 (361)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence 999999999997654 6899999999999999999999 899999999999999987665 99999999975322
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.......+||+.|+||
T Consensus 171 -~~~~~~~~gt~~y~aP 186 (361)
T 3uc3_A 171 -HSQPKSTVGTPAYIAP 186 (361)
T ss_dssp -----------CTTSCH
T ss_pred -cCCCCCCcCCCCcCCh
Confidence 1223456799999998
No 145
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=9.3e-29 Score=247.83 Aligned_cols=165 Identities=25% Similarity=0.273 Sum_probs=138.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||+||+|++. +++.||||++.... .........|+..+.++ +||||+++++++...+..|+||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 79999999986432 22334455566666555 8999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+ +++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 77999998877667999999999999999999999 899999999999999999999999999999865322
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 211 -~~~~~~~gt~~y~aP 225 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAP 225 (311)
T ss_dssp -----CCCCCGGGCCG
T ss_pred -CCCcccCCCccccCH
Confidence 223445799999998
No 146
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=2.4e-28 Score=256.07 Aligned_cols=168 Identities=27% Similarity=0.369 Sum_probs=141.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC-----Ce
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 484 (585)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+++++.++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999876 6889999999753 233457888999999999999999999998766 57
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+||||++ ++|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999995 59999997653 6899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCc--------------------cccccccccccccCC
Q 047705 565 IGEDQS--------------------MTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~--------------------~~~~~~~gt~~y~aP 585 (585)
...... ......+||++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 220 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220 (432)
T ss_dssp -------------------------------CCCCCTTCCH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCH
Confidence 432211 123567899999998
No 147
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=1.4e-28 Score=242.94 Aligned_cols=169 Identities=24% Similarity=0.415 Sum_probs=144.7
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
..++|++.+.||+|+||.||+|++.++..||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3467999999999999999999998888999999975432 346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cc
Confidence 9999999999875567899999999999999999999 8999999999999999999999999999998653221 12
Q ss_pred ccccccccccccCC
Q 047705 572 TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 177 ~~~~~~~~~~y~aP 190 (283)
T 3gen_A 177 SSVGSKFPVRWSPP 190 (283)
T ss_dssp STTSTTSCGGGCCH
T ss_pred cccCCccCcccCCH
Confidence 22345578889998
No 148
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=2.3e-28 Score=247.18 Aligned_cols=167 Identities=25% Similarity=0.323 Sum_probs=145.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .+.+..|+++++.+ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 367999999999999999999864 789999999875432 35688899999999 99999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc-----EEEeeeccccccc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI-----AYLSDFGIAKLLI 565 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~ 565 (585)
|+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999876667999999999999999999999 899999999999999998887 9999999998764
Q ss_pred CCCCcc-----ccccccccccccCC
Q 047705 566 GEDQSM-----TQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~-----~~~~~~gt~~y~aP 585 (585)
...... ......||+.|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aP 186 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSI 186 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred cCCCCccccccccCCcCCCccccCh
Confidence 332211 12456899999998
No 149
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3.7e-29 Score=265.89 Aligned_cols=243 Identities=23% Similarity=0.225 Sum_probs=203.0
Q ss_pred CCccccCCC----CCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccC
Q 047705 2 IPLEIGNLQ----NLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFL 77 (585)
Q Consensus 2 ~p~~~~~l~----~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (585)
+|..+..+. +|++|+|++|.+++..|..|..+++|++|+|++|.|++.++ +..+++|++|+|++|.|+.++.
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~- 97 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLV- 97 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEE-
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCC-
Confidence 344454544 89999999999998888999999999999999999986665 5589999999999999988864
Q ss_pred ccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhh-C
Q 047705 78 SSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLS-K 156 (585)
Q Consensus 78 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~ 156 (585)
.++|++|+|++|.++++.+. .++ +|+.|+|++|.+++..|..|+.+++|++|+|++|.+.+..|..|. .
T Consensus 98 -----~~~L~~L~L~~N~l~~~~~~----~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~ 167 (487)
T 3oja_A 98 -----GPSIETLHAANNNISRVSCS----RGQ-GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAAS 167 (487)
T ss_dssp -----CTTCCEEECCSSCCCCEEEC----CCS-SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGG
T ss_pred -----CCCcCEEECcCCcCCCCCcc----ccC-CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhh
Confidence 38999999999999877554 234 499999999999999999999999999999999999998888886 7
Q ss_pred CCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccC
Q 047705 157 LQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSM 236 (585)
Q Consensus 157 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~ 236 (585)
+++|++|+|++|.|++..+ +..+++|++|+|++|.|++.+|. |.. +++|+.|++++
T Consensus 168 l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~---------------------l~~L~~L~Ls~ 223 (487)
T 3oja_A 168 SDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQS---------------------AAGVTWISLRN 223 (487)
T ss_dssp TTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGG---------------------GTTCSEEECTT
T ss_pred CCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcC---------------------CCCccEEEecC
Confidence 9999999999999997633 44699999999999999964443 444 45566677777
Q ss_pred CcccccCCcccCCCCCCcEEeecccCcc-cccCccccCcCCCCEEeCC
Q 047705 237 NNFSGIIPKEIGGLKNLEYLFLGYNRLQ-GLIPDSFGNLISLKFLNLS 283 (585)
Q Consensus 237 N~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~ 283 (585)
|.+++ +|..+..+++|+.|++++|+++ +.+|.++..++.|+.++++
T Consensus 224 N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 224 NKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp SCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 77875 5666788888888888888887 5667777888888887775
No 150
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.95 E-value=4.9e-28 Score=250.50 Aligned_cols=171 Identities=20% Similarity=0.286 Sum_probs=147.7
Q ss_pred hcCCCCccceeccc--CceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 412 ATDGFSENNLIGRG--GFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 412 ~~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
..++|++.+.||+| +||.||+|++. +++.||||+++... ....+.+.+|+++++.++||||+++++++..++..|
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34679999999999 99999999976 79999999998653 344577888999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 487 LVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
+|||||++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999998752 36899999999999999999999 8999999999999999999999999999987653
Q ss_pred CCCCc-----cccccccccccccCC
Q 047705 566 GEDQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~-----~~~~~~~gt~~y~aP 585 (585)
..... ......+||+.|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aP 204 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSP 204 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCH
T ss_pred cccccccccccccccccccccccCH
Confidence 22111 112334799999998
No 151
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=3.5e-28 Score=243.05 Aligned_cols=168 Identities=27% Similarity=0.493 Sum_probs=139.2
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3468999999999999999999864 36899987643 23445788999999999999999999998754 5578999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||+|+.......
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877778999999999999999999999 89999999999999999999999999999986543222
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
........||+.|+||
T Consensus 188 ~~~~~~~~gt~~y~aP 203 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAP 203 (307)
T ss_dssp ------CCCCTTSCCH
T ss_pred cccccCCCCCcceECc
Confidence 3333456799999998
No 152
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=244.58 Aligned_cols=166 Identities=27% Similarity=0.422 Sum_probs=143.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC--eEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 489 (585)
++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56999999999999999999876 58999999997543 334567789999999999999999999987665 789999
Q ss_pred EccCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe----CCCCcEEEeeeccccc
Q 047705 490 EYMPQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL----DDNMIAYLSDFGIAKL 563 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll----~~~~~~kl~Dfg~a~~ 563 (585)
||+++++|.+++..... .+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986542 3899999999999999999999 8999999999999999 7888899999999987
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..... ......||+.|+||
T Consensus 166 ~~~~~---~~~~~~gt~~y~aP 184 (319)
T 4euu_A 166 LEDDE---QFVSLYGTEEYLHP 184 (319)
T ss_dssp CCTTC---CBCCCCSCGGGCCH
T ss_pred cCCCC---ceeecccCCCccCH
Confidence 64322 22346799999998
No 153
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.6e-29 Score=254.23 Aligned_cols=169 Identities=25% Similarity=0.402 Sum_probs=143.7
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 57899999999999999999843 4678999998643 3344567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC---cEEEee
Q 047705 487 LVLEYMPQGSLEKHLYSTN------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM---IAYLSD 557 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~---~~kl~D 557 (585)
+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997643 35889999999999999999999 89999999999999999555 599999
Q ss_pred ecccccccCCCCccccccccccccccCC
Q 047705 558 FGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 558 fg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+|+...............||+.|+||
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPP 255 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred CccccccccccccccCCCcCCcccEECH
Confidence 9999865433333333456789999998
No 154
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=4.2e-28 Score=238.79 Aligned_cols=166 Identities=30% Similarity=0.382 Sum_probs=147.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|.+. ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457999999999999999999876 5789999999876555667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeecccccccCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 6899999999999999999999 8999999999999999 788999999999998754322
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 164 ---~~~~~~~t~~y~aP 177 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSP 177 (277)
T ss_dssp ---CBCCCCSCTTTCCH
T ss_pred ---chhccCCCCCccCh
Confidence 22445799999998
No 155
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=4.8e-28 Score=238.53 Aligned_cols=170 Identities=26% Similarity=0.433 Sum_probs=137.7
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh---hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
...++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 34568999999999999999999874 789999999975432 23467889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++++|.+++......+++..++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||.+.....
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999999877667899999999999999999999 89999999999999999999999999999986532
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
.. .......||+.|+||
T Consensus 165 ~~--~~~~~~~~~~~y~aP 181 (278)
T 3cok_A 165 PH--EKHYTLCGTPNYISP 181 (278)
T ss_dssp -------------------
T ss_pred CC--CcceeccCCCCcCCc
Confidence 21 122345789999998
No 156
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3e-28 Score=247.84 Aligned_cols=172 Identities=24% Similarity=0.428 Sum_probs=145.4
Q ss_pred HhcCCCCccceecccCceEEEEEEe------CCCcEEEEEEEech-hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecC
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 482 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 482 (585)
...++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457899999999999999999985 24568999998754 233456788999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCC
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNC----------------------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDL 540 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dl 540 (585)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 999999999999999999986542 3788899999999999999999 899999999
Q ss_pred CCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 541 KPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 541 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 243 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence 999999999999999999999876544333334456688999998
No 157
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95 E-value=7.4e-29 Score=248.61 Aligned_cols=169 Identities=24% Similarity=0.426 Sum_probs=136.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC----e
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE----F 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 484 (585)
.++|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|++++++++||||+++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 468999999999999999999874 78999999997642 234567889999999999999999999987654 3
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+||||++|++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999998654 6899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCc-cccccccccccccCC
Q 047705 565 IGEDQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~-~~~~~~~gt~~y~aP 585 (585)
...... .......||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aP 188 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSP 188 (311)
T ss_dssp ---------------CCTTCCH
T ss_pred cccccccccccccCcCcccCCH
Confidence 433221 223346799999998
No 158
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=3.1e-28 Score=244.26 Aligned_cols=171 Identities=25% Similarity=0.414 Sum_probs=146.9
Q ss_pred hcCCCCccceecccCceEEEEEEe------CCCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
..++|.+.+.||+|+||.||+|++ .+++.||+|+++.. .....+.+.+|+++++.++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 346799999999999999999975 24578999998754 23455778899999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCC-----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCC
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNC-----------------------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~-----------------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlk 541 (585)
.++||||+++++|.+++..... .+++..++.++.|+++||+||| +++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 9999999999999999986432 3788999999999999999999 8999999999
Q ss_pred CCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 542 PSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 542 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+||+++.++.+||+|||+++...............||+.|+||
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 221 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence 99999999999999999999876543333333455678899998
No 159
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=247.15 Aligned_cols=167 Identities=23% Similarity=0.388 Sum_probs=140.1
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCC--CcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRH--RNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++++.++| |||+++++++..++..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3569999999999999999999888999999998754 23445778899999999987 9999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
||+ .+++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+|||++ ++.+||+|||+|+......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5889999998764 6889999999999999999999 89999999999999997 6789999999998765433
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
........+||+.|+||
T Consensus 162 ~~~~~~~~~gt~~y~aP 178 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPP 178 (343)
T ss_dssp --------CCCCSSCCH
T ss_pred ccccCCCCcCCcCcCCH
Confidence 33334456899999998
No 160
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=2.6e-28 Score=241.84 Aligned_cols=164 Identities=25% Similarity=0.384 Sum_probs=144.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CC-------cEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DG-------MEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
.++|++.+.||+|+||.||+|++. ++ ..||+|++........+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 357899999999999999999764 33 5799999987666667889999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc--------EEEe
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI--------AYLS 556 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~--------~kl~ 556 (585)
.++||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999887656899999999999999999999 899999999999999988876 9999
Q ss_pred eecccccccCCCCccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||.+..... .....||+.|+||
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aP 186 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPP 186 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCH
T ss_pred cCcccccccC------ccccCCcCcccCH
Confidence 9999875421 1234588899998
No 161
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.4e-27 Score=235.00 Aligned_cols=229 Identities=26% Similarity=0.280 Sum_probs=157.1
Q ss_pred EEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEee
Q 047705 63 ELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLG 142 (585)
Q Consensus 63 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 142 (585)
.++.++..++.+|. .+. ++|++|+|++|+++++.+. .+.+++. |++|++++|.+++..+..|..+++|++|+|+
T Consensus 11 ~~~c~~~~l~~ip~--~l~--~~l~~L~ls~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 84 (276)
T 2z62_A 11 TYQCMELNFYKIPD--NLP--FSTKNLDLSFNPLRHLGSY-SFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (276)
T ss_dssp EEECTTSCCSSCCS--SSC--TTCCEEECTTCCCCEECTT-TTTTCTT-CSEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred eEEecCCCccccCC--CCC--CCccEEECCCCcccccCHh-HhccccC-CcEEECCCCcCCccCHHHccCCcCCCEEECC
Confidence 46666777777763 222 4677777777777655443 3444444 5566666555555555555555555555555
Q ss_pred CCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCcc
Q 047705 143 GNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLE 222 (585)
Q Consensus 143 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 222 (585)
+|++.+..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+++.. +|..
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------l~~~ 144 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK--------------------LPEY 144 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC--------------------CCGG
T ss_pred CCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec--------------------Cchh
Confidence 55555555555555555555555555555544445555555555555555554321 2445
Q ss_pred CCCCCCCcEEEccCCcccccCCcccCCCCCCc----EEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccC
Q 047705 223 IGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLE----YLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKL 298 (585)
Q Consensus 223 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~----~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 298 (585)
+..+++|+.|++++|++++..+..|..+++|+ .|++++|++++..+..+.. .+|+.|++++|++++..+..+..+
T Consensus 145 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l 223 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRL 223 (276)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTC
T ss_pred hccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccc
Confidence 66677788888899999888777787777776 8999999999876666654 489999999999998877778999
Q ss_pred CccceEEeecCcCeeeCCCC
Q 047705 299 SYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 299 ~~L~~l~l~~N~l~~~~~~~ 318 (585)
++|+.|++++|+|.|.|+..
T Consensus 224 ~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CSCCEEECCSSCBCCCTTTT
T ss_pred ccccEEEccCCcccccCCch
Confidence 99999999999999999864
No 162
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.95 E-value=7e-28 Score=237.00 Aligned_cols=169 Identities=24% Similarity=0.359 Sum_probs=147.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999876 78999999997543 3345778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999987643 6899999999999999999999 899999999999999999999999999999865433222
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 162 ~~~~~~~~~~~y~aP 176 (276)
T 2yex_A 162 RLLNKMCGTLPYVAP 176 (276)
T ss_dssp CCBCCCCSCGGGCCG
T ss_pred hcccCCccccCccCh
Confidence 223456799999998
No 163
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.95 E-value=7.2e-28 Score=243.92 Aligned_cols=170 Identities=28% Similarity=0.465 Sum_probs=145.2
Q ss_pred cCCCCccceecccCceEEEEEEeC--------CCcEEEEEEEech-hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecC
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 482 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 482 (585)
.++|++.+.||+|+||.||+|++. ++..||+|+++.. .....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468999999999999999999863 4678999998754 234557788999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNC---------------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
+..|+||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 999999999999999999986532 3788999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+++...............+|+.|+||
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 228 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence 99999999999999876443322233445678899998
No 164
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=2.5e-28 Score=246.46 Aligned_cols=168 Identities=27% Similarity=0.415 Sum_probs=136.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcE----EEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|++.+.||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++...+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56899999999999999999864 4444 577776533 2344578899999999999999999999998765 779
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999987778999999999999999999999 899999999999999999999999999999876544
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
..........||+.|+||
T Consensus 171 ~~~~~~~~~~~t~~y~aP 188 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp CC-------CCCGGGSCH
T ss_pred cccccccCCCccccccCh
Confidence 433334455678899998
No 165
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=6.6e-28 Score=265.52 Aligned_cols=169 Identities=24% Similarity=0.292 Sum_probs=147.1
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 485 (585)
...++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+..|..+++.+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 45678999999999999999999876 68899999998542 23456778899999988 799999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||++||+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 99999999999999998754 6899999999999999999999 8999999999999999999999999999998643
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......+||+.||||
T Consensus 494 ~~~--~~~~~~~GT~~Y~AP 511 (674)
T 3pfq_A 494 WDG--VTTKTFCGTPDYIAP 511 (674)
T ss_dssp CTT--CCBCCCCSCSSSCCH
T ss_pred cCC--cccccccCCCcccCH
Confidence 222 233567899999998
No 166
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.95 E-value=6.7e-28 Score=249.15 Aligned_cols=166 Identities=23% Similarity=0.385 Sum_probs=140.8
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcC--CCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIR--HRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 489 (585)
+.|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 359999999999999999999888999999999754 2345678899999999996 599999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
| +.+++|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999998765 6888899999999999999999 99999999999999996 58999999999987643332
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......+||+.||||
T Consensus 210 ~~~~~~~~gt~~y~aP 225 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPP 225 (390)
T ss_dssp ----CCSCCCGGGCCH
T ss_pred cccCCCCCcCCCccCh
Confidence 2233456899999998
No 167
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=2.2e-28 Score=246.70 Aligned_cols=168 Identities=27% Similarity=0.442 Sum_probs=139.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcE----EEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|++.+.||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57999999999999999999865 4544 7777765432 233456778999999999999999999986 456889
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999877667889999999999999999999 899999999999999999999999999999976544
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
..........||+.|+||
T Consensus 169 ~~~~~~~~~~~~~~y~aP 186 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMAL 186 (325)
T ss_dssp TTCCC-----CCTTTSCH
T ss_pred cccccccCCCCcccccCh
Confidence 433344556788899998
No 168
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=8.3e-28 Score=237.01 Aligned_cols=165 Identities=29% Similarity=0.445 Sum_probs=141.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999876 67899999987542 22346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++++|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 99999999999997654 6889999999999999999999 999999999999999999999999999998654221
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 163 ---~~~~~~~~~~y~aP 176 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPP 176 (279)
T ss_dssp --------CCCCTTCCH
T ss_pred ---cccccCCCCCccCH
Confidence 22446789999998
No 169
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.95 E-value=4.8e-28 Score=242.81 Aligned_cols=171 Identities=25% Similarity=0.410 Sum_probs=147.2
Q ss_pred hcCCCCccceecccCceEEEEEEe------CCCcEEEEEEEechh-hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCC
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEE 483 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 483 (585)
..++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346799999999999999999974 256789999997543 23457788999999999 9999999999999999
Q ss_pred eEEEEEEccCCCCHHHHhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEE
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNC-----------------ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVL 546 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIl 546 (585)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEE
Confidence 99999999999999999986542 3889999999999999999999 899999999999999
Q ss_pred eCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 547 LDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 547 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++.++.+||+|||+++...............||+.|+||
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 216 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeCh
Confidence 999999999999999876544333333455678899998
No 170
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=246.28 Aligned_cols=164 Identities=26% Similarity=0.393 Sum_probs=129.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|++. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467999999999999999999976 68899999987543 345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeecccccccCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~ 568 (585)
+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 130 VTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 99999999997654 6899999999999999999999 899999999999999975 889999999999865321
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......+||+.|+||
T Consensus 205 --~~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 205 --VLMKTVCGTPGYCAP 219 (349)
T ss_dssp ----------CGGGSCH
T ss_pred --cccccccCCCCccCH
Confidence 122456799999998
No 171
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=3.3e-29 Score=253.98 Aligned_cols=161 Identities=21% Similarity=0.258 Sum_probs=133.1
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--------hhhHHHHHHHHHHHHhcC---------CCcceeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--------RRAFKSFDVECEIMKSIR---------HRNLIKV 475 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 475 (585)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45799999999999999999998 68999999997642 223467889999999886 6666666
Q ss_pred Eee-----------------eec-------------CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 047705 476 ISS-----------------CSN-------------EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALE 525 (585)
Q Consensus 476 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 525 (585)
.+. |.. .+..|+|||||++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977776654 35799999999999999999
Q ss_pred HHhcCCCCCcEEcCCCCCCEEeCCCC--------------------cEEEeeecccccccCCCCccccccccccccccCC
Q 047705 526 YLHFGCSTPVIHCDLKPSNVLLDDNM--------------------IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 526 ~lH~~~~~~iiH~dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||+ +++|+||||||+|||++.++ .+||+|||+|+.... ...+||+.||||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 9992 37999999999999999877 999999999987532 234799999999
No 172
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=9.2e-28 Score=240.56 Aligned_cols=167 Identities=27% Similarity=0.369 Sum_probs=139.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999876 68999999886442 234567888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||++++++.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.++......
T Consensus 82 e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp ECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 9999999988876553 6899999999999999999999 8999999999999999999999999999998754222
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 157 -~~~~~~~~~~~y~aP 171 (311)
T 4agu_A 157 -DYYDDEVATRWYRSP 171 (311)
T ss_dssp ----------GGGCCH
T ss_pred -cccCCCcCCccccCh
Confidence 122445789999998
No 173
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.95 E-value=6.9e-28 Score=242.93 Aligned_cols=158 Identities=25% Similarity=0.344 Sum_probs=125.8
Q ss_pred cceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCCeEEEEEEccCCCC
Q 047705 419 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKGLVLEYMPQGS 496 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 496 (585)
.+.||+|+||.||+|.+. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999876 6899999999754 3356778999999997 9999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC---cEEEeeecccccccCCCCcccc
Q 047705 497 LEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM---IAYLSDFGIAKLLIGEDQSMTQ 573 (585)
Q Consensus 497 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 573 (585)
|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++..... ....
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--CCcc
Confidence 999998764 6899999999999999999999 89999999999999997665 8999999999865322 2223
Q ss_pred ccccccccccCC
Q 047705 574 TQTLATIGYMAP 585 (585)
Q Consensus 574 ~~~~gt~~y~aP 585 (585)
...+||+.|+||
T Consensus 167 ~~~~~t~~y~aP 178 (325)
T 3kn6_A 167 KTPCFTLHYAAP 178 (325)
T ss_dssp ------------
T ss_pred cccCCCcCccCH
Confidence 456789999998
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.1e-28 Score=246.50 Aligned_cols=167 Identities=29% Similarity=0.375 Sum_probs=145.1
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh--------hhHHHHHHHHHHHHhcCCCcceeEEeeeecC
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR--------RAFKSFDVECEIMKSIRHRNLIKVISSCSNE 482 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 482 (585)
..++|++.+.||+|+||.||+|++. +++.||||+++.... .....+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999865 789999999975421 1334677899999999999999999999999
Q ss_pred CeEEEEEEccCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccc
Q 047705 483 EFKGLVLEYMPQG-SLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA 561 (585)
Q Consensus 483 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a 561 (585)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| .++|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999776 9999988764 6899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCccccccccccccccCC
Q 047705 562 KLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+...... .....+||+.|+||
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aP 198 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAP 198 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCH
T ss_pred eECCCCC---ceeccCCCccccCh
Confidence 8754322 22346799999998
No 175
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=8.2e-28 Score=248.70 Aligned_cols=169 Identities=25% Similarity=0.389 Sum_probs=133.7
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCC--e
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEE--F 484 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 484 (585)
...++|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.+++.+. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999875 7899999998643 2344567788999999997 999999999997554 7
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+|||||+ ++|.+++... .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999996 5999998764 5888999999999999999999 899999999999999999999999999999865
Q ss_pred cCCC-------------------CccccccccccccccCC
Q 047705 565 IGED-------------------QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~-------------------~~~~~~~~~gt~~y~aP 585 (585)
.... ........+||++|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCH
Confidence 3211 11123456899999998
No 176
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.95 E-value=7.3e-28 Score=240.19 Aligned_cols=169 Identities=25% Similarity=0.453 Sum_probs=143.1
Q ss_pred CCCCccceecccCceEEEEEEe-----CCCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC--CeE
Q 047705 414 DGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFK 485 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 485 (585)
+.|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++.++||||+++++++... +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588999999999999999983 368899999987543 33457788999999999999999999999877 668
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
++||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCc-cccccccccccccCC
Q 047705 566 GEDQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~-~~~~~~~gt~~y~aP 585 (585)
..... .......||+.|+||
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aP 198 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAP 198 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCH
T ss_pred CCCcceeccCCCCCCccccCC
Confidence 33221 223455688899998
No 177
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.95 E-value=2.1e-28 Score=246.50 Aligned_cols=179 Identities=21% Similarity=0.367 Sum_probs=149.9
Q ss_pred cCHHHHHHhcCCCCccceecccCceEEEEEEeC------CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEE
Q 047705 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVI 476 (585)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 476 (585)
+...++....++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 333445556678999999999999999999754 36789999987542 33456788999999999999999999
Q ss_pred eeeecCCeEEEEEEccCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 477 SSCSNEEFKGLVLEYMPQGSLEKHLYSTN---------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 477 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
+++...+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence 99999999999999999999999987532 24688899999999999999999 8999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+++...............||+.|+||
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccCh
Confidence 99999999999999866433322333455678999998
No 178
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=2e-27 Score=234.84 Aligned_cols=166 Identities=25% Similarity=0.470 Sum_probs=144.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 478999999999999999999876 68999999997542 334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc---EEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI---AYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 566 (585)
||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998887654 6899999999999999999999 899999999999999986655 99999999986532
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
. .......||+.|+||
T Consensus 161 ~---~~~~~~~~~~~y~aP 176 (284)
T 3kk8_A 161 S---EAWHGFAGTPGYLSP 176 (284)
T ss_dssp S---CBCCCSCSCGGGCCH
T ss_pred C---ccccCCCCCcCCcCc
Confidence 2 222446799999998
No 179
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=9.7e-28 Score=241.57 Aligned_cols=166 Identities=27% Similarity=0.390 Sum_probs=145.4
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhh------hHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRR------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+++++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356999999999999999999876 6899999999754321 356789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC----cEEEeeeccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIA 561 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~a 561 (585)
++||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997654 6889999999999999999999 89999999999999999887 7999999999
Q ss_pred ccccCCCCccccccccccccccCC
Q 047705 562 KLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+...... ......||+.|+||
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aP 187 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAP 187 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCH
T ss_pred eecCccc---cccccCCCCCccCc
Confidence 8754321 22446799999998
No 180
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=9.6e-28 Score=244.03 Aligned_cols=162 Identities=30% Similarity=0.407 Sum_probs=142.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEech---hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
+.|+..+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 34888999999999999999864 7899999998743 2334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||++ |++.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC---
Confidence 9996 6888888765567899999999999999999999 89999999999999999999999999999986532
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
....+||+.|+||
T Consensus 207 ---~~~~~gt~~y~aP 219 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAP 219 (348)
T ss_dssp ---BCCCCSCGGGCCH
T ss_pred ---CCcccCCcceeCH
Confidence 2345799999998
No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=5.6e-28 Score=245.93 Aligned_cols=171 Identities=29% Similarity=0.445 Sum_probs=139.6
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh-----hhHHHHHHHHHHHHhcCCCcceeEEeeeecC
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-----RAFKSFDVECEIMKSIRHRNLIKVISSCSNE 482 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 482 (585)
.....++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3445678999999999999999999875 689999999875321 1134678899999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
+..++||||+++ ++.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999999975 899998877667888999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
...... ......+||+.|+||
T Consensus 161 ~~~~~~--~~~~~~~~t~~y~aP 181 (346)
T 1ua2_A 161 SFGSPN--RAYTHQVVTRWYRAP 181 (346)
T ss_dssp TTTSCC--CCCCCSCCCCTTCCH
T ss_pred eccCCc--ccCCcccccccccCc
Confidence 754222 223456799999998
No 182
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.95 E-value=5.8e-28 Score=244.93 Aligned_cols=164 Identities=29% Similarity=0.427 Sum_probs=140.3
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|+++ +++.||+|+++.... ...+|++++.++ +||||+++++++.+.+..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3467999999999999999999876 689999999975532 335688888888 7999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC----CcEEEeeeccccccc
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN----MIAYLSDFGIAKLLI 565 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~a~~~~ 565 (585)
||++||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||++.++ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999997754 6899999999999999999999 8999999999999998532 359999999998764
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......+||+.|+||
T Consensus 172 ~~~--~~~~~~~gt~~y~aP 189 (342)
T 2qr7_A 172 AEN--GLLMTPCYTANFVAP 189 (342)
T ss_dssp CTT--CCBCCSSCCSSCCCH
T ss_pred CCC--CceeccCCCccccCH
Confidence 322 123456899999998
No 183
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=1.1e-27 Score=240.51 Aligned_cols=169 Identities=26% Similarity=0.347 Sum_probs=139.8
Q ss_pred cCCCCcc-ceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.+.|++. +.||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++..++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3578874 78999999999999865 7899999999866555567888999999985 7999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc---EEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI---AYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 566 (585)
||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999998754 6889999999999999999999 899999999999999987765 99999999886532
Q ss_pred CCC-----ccccccccccccccCC
Q 047705 567 EDQ-----SMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~-----~~~~~~~~gt~~y~aP 585 (585)
... .......+||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aP 190 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAP 190 (316)
T ss_dssp ---------------CCSGGGCCH
T ss_pred CCccccccccccccccCCcCccCh
Confidence 211 1112345699999998
No 184
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=7.5e-28 Score=243.07 Aligned_cols=169 Identities=28% Similarity=0.415 Sum_probs=146.6
Q ss_pred CCCCccceecccCceEEEEEEe-----CCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeee--cCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 486 (585)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. ..+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5799999999999999999984 368899999998766666678999999999999999999999886 456789
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876557899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCc-cccccccccccccCC
Q 047705 567 EDQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~-~~~~~~~gt~~y~aP 585 (585)
.... .......||+.|+||
T Consensus 180 ~~~~~~~~~~~~~~~~y~aP 199 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAP 199 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCH
T ss_pred CCccceeeccCCccccccCH
Confidence 3221 123445688899998
No 185
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=2.3e-27 Score=235.69 Aligned_cols=166 Identities=22% Similarity=0.333 Sum_probs=145.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57999999999999999999876 68899999987542 334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++++|.+++.... .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||.++......
T Consensus 95 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169 (294)
T ss_dssp ECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence 9999999999887654 6889999999999999999999 8999999999999999999999999999998754222
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 170 -~~~~~~~~~~~y~aP 184 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAP 184 (294)
T ss_dssp -CCBCCCCSCCSSCCH
T ss_pred -cccccccCCCCcCCc
Confidence 223446799999998
No 186
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=4.8e-28 Score=244.04 Aligned_cols=172 Identities=26% Similarity=0.462 Sum_probs=129.1
Q ss_pred HhcCCCCccceecccCceEEEEEEeCC-C---cEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLGD-G---MEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
...++|++.+.||+|+||.||+|++.. + ..||||+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999998653 3 27999998754 33456788999999999999999999999987765
Q ss_pred E------EEEEEccCCCCHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcE
Q 047705 485 K------GLVLEYMPQGSLEKHLYSTN-----CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIA 553 (585)
Q Consensus 485 ~------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~ 553 (585)
. ++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999986432 25889999999999999999999 8999999999999999999999
Q ss_pred EEeeecccccccCCCCccccccccccccccCC
Q 047705 554 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 554 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+|||+|+...............+|+.|+||
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 208 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208 (323)
T ss_dssp EECCCCC-----------------CCGGGCCH
T ss_pred EEeeccccccccccccccccccccCcccccCc
Confidence 99999999876443333333455678899998
No 187
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=6.4e-28 Score=236.05 Aligned_cols=168 Identities=26% Similarity=0.410 Sum_probs=147.2
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 357899999999999999999988888999999976532 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccc
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMT 572 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 572 (585)
++++|.+++......+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++..... ....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc-cccc
Confidence 999999999887667899999999999999999999 899999999999999999999999999999865321 1112
Q ss_pred cccccccccccCC
Q 047705 573 QTQTLATIGYMAP 585 (585)
Q Consensus 573 ~~~~~gt~~y~aP 585 (585)
.....||+.|+||
T Consensus 162 ~~~~~~~~~y~aP 174 (267)
T 3t9t_A 162 STGTKFPVKWASP 174 (267)
T ss_dssp TTSTTCCGGGCCH
T ss_pred cccccccccccCh
Confidence 2345678889998
No 188
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=7.9e-28 Score=237.94 Aligned_cols=166 Identities=30% Similarity=0.439 Sum_probs=140.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56899999999999999999875 68999999987653 23457888999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeeccccccc
Q 047705 492 MPQGSLEKHLYST---NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 492 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 565 (585)
+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 246899999999999999999999 8999999999999999 456789999999998654
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.. .......||+.|+||
T Consensus 179 ~~---~~~~~~~~t~~y~aP 195 (285)
T 3is5_A 179 SD---EHSTNAAGTALYMAP 195 (285)
T ss_dssp -----------CTTGGGCCH
T ss_pred Cc---ccCcCcccccCcCCh
Confidence 32 223456799999998
No 189
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=8.4e-28 Score=244.56 Aligned_cols=174 Identities=27% Similarity=0.376 Sum_probs=142.7
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-----hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-----RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE 482 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 482 (585)
+....++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4455678999999999999999999875 78899999987542 34457889999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 047705 483 EFKGLVLEYMPQGSLEKHLYST---------------------------------------NCILDIFQRLNIMIDVASA 523 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~ 523 (585)
+..++||||++||+|.+++... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988521 1123567788999999999
Q ss_pred HHHHhcCCCCCcEEcCCCCCCEEeCCCC--cEEEeeecccccccCCCC--ccccccccccccccCC
Q 047705 524 LEYLHFGCSTPVIHCDLKPSNVLLDDNM--IAYLSDFGIAKLLIGEDQ--SMTQTQTLATIGYMAP 585 (585)
Q Consensus 524 l~~lH~~~~~~iiH~dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aP 585 (585)
|+||| +++|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+||
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 99999 89999999999999998766 899999999986543221 1123456799999998
No 190
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=1.2e-27 Score=235.37 Aligned_cols=165 Identities=24% Similarity=0.413 Sum_probs=126.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 468999999999999999999865 78999999987542 23356788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+ ++++.+++.... .+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 778888887654 6899999999999999999999 8999999999999999999999999999998653222
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 167 ---~~~~~~~t~~y~aP 180 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTCCH
T ss_pred ---cccCCCCCcCcCCc
Confidence 22345799999998
No 191
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=244.94 Aligned_cols=166 Identities=25% Similarity=0.405 Sum_probs=137.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhh-hHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRR-AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 67999999999999999999876 7899999998754322 222455799999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
++ |+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TK 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--cc
Confidence 96 5999999887767899999999999999999999 899999999999999999999999999999864322 12
Q ss_pred ccccccccccccCC
Q 047705 572 TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 156 TYDNEVVTLWYRPP 169 (324)
T ss_dssp -------CGGGCCH
T ss_pred ccccccCcccccCh
Confidence 23445789999998
No 192
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.6e-28 Score=248.09 Aligned_cols=168 Identities=27% Similarity=0.407 Sum_probs=144.9
Q ss_pred cCCCCccceecccCceEEEEEEe----CCCcEEEEEEEechh----hhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCC
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----RRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEE 483 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 483 (585)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+..|+++++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999987 368999999986432 23345677899999999 6999999999999999
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
..++||||+++++|.+++.... .+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999998654 6889999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.... .......+||+.|+||
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aP 229 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAP 229 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCH
T ss_pred cccCC-CCcccCcccCcCccCh
Confidence 53222 2223456799999998
No 193
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=2.1e-27 Score=240.63 Aligned_cols=167 Identities=22% Similarity=0.331 Sum_probs=146.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357899999999999999999876 57899999987542 33457788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999887654 6899999999999999999999 8999999999999999999999999999998754222
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 196 --~~~~~~~gt~~y~aP 210 (335)
T 2owb_A 196 --ERKKVLCGTPNYIAP 210 (335)
T ss_dssp --CCBCCCCSCCSSCCH
T ss_pred --ccccccCCCccccCH
Confidence 223446799999998
No 194
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=4.9e-28 Score=245.07 Aligned_cols=174 Identities=25% Similarity=0.406 Sum_probs=147.1
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CC-----cEEEEEEEechh-hhhHHHHHHHHHHHHhc-CCCcceeEEeeee
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DG-----MEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRNLIKVISSCS 480 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 480 (585)
.....++|++.+.||+|+||.||+|++. ++ ..||+|++.... ....+.+.+|+++++.+ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3344578999999999999999999864 22 479999987542 33457788999999999 8999999999999
Q ss_pred cCCeEEEEEEccCCCCHHHHhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 481 NEEFKGLVLEYMPQGSLEKHLYST-------------NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 481 ~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
..+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence 999999999999999999998753 235788999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+++...............||+.|+||
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 235 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCH
Confidence 99999999999999876543333333455678899998
No 195
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=248.56 Aligned_cols=166 Identities=27% Similarity=0.413 Sum_probs=143.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC--eEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 489 (585)
++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56999999999999999999876 58999999997543 234567788999999999999999999988765 789999
Q ss_pred EccCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe----CCCCcEEEeeeccccc
Q 047705 490 EYMPQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL----DDNMIAYLSDFGIAKL 563 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll----~~~~~~kl~Dfg~a~~ 563 (585)
||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999976532 3899999999999999999999 8999999999999999 7788899999999987
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .......||+.|+||
T Consensus 166 ~~~~---~~~~~~~gt~~y~aP 184 (396)
T 4eut_A 166 LEDD---EQFVSLYGTEEYLHP 184 (396)
T ss_dssp CCCG---GGSSCSSSCCTTCCH
T ss_pred ccCC---CccccccCCccccCH
Confidence 5432 222446799999998
No 196
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.1e-26 Score=228.48 Aligned_cols=213 Identities=23% Similarity=0.258 Sum_probs=165.2
Q ss_pred CCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccE
Q 047705 59 PNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLIT 138 (585)
Q Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 138 (585)
++|++|+|++|+++.++. ..|..+++|++|+|++|+++++.+. .+..++. |++|++++|.+++..+..|..+++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDG-AYQSLSH-LSTLILTGNPIQSLALGAFSGLSSLQK 104 (276)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCSEEECTTCCCCEECTT-TTTTCTT-CCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccEEECCCCcccccCH-hHhccccCCcEEECCCCcCCccCHH-HccCCcC-CCEEECCCCccCccChhhhcCCccccE
Confidence 456666666666666654 4566666666666666666655443 4455554 677777777776667777888999999
Q ss_pred EEeeCCccccccchhhhCCCCCceEEccCCCCCcc-CcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC
Q 047705 139 IDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGS-IPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND 217 (585)
Q Consensus 139 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (585)
|++++|.+.+..+..|..+++|++|++++|++++. +|..+..+++|++|+|++|++++..+..|..+++|+.|.+
T Consensus 105 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l---- 180 (276)
T 2z62_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL---- 180 (276)
T ss_dssp EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE----
T ss_pred EECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce----
Confidence 99999999988777899999999999999999874 4888999999999999999999877777777666654432
Q ss_pred CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCC
Q 047705 218 PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIP 292 (585)
Q Consensus 218 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 292 (585)
.|++++|.+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|+++...+
T Consensus 181 -------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 181 -------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp -------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred -------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 6888999998777666654 479999999999998877778999999999999999986543
No 197
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=1.1e-27 Score=250.01 Aligned_cols=167 Identities=28% Similarity=0.362 Sum_probs=134.8
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--------hhhHHHHHHHHHHHHhcCCCcceeEEeeeec
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------RRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 481 (585)
...++|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999875 68999999997542 1123357889999999999999999999865
Q ss_pred CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC---CcEEEeee
Q 047705 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDF 558 (585)
Q Consensus 482 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Df 558 (585)
+..|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+|||++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45789999999999999887654 6899999999999999999999 8999999999999999754 45999999
Q ss_pred cccccccCCCCccccccccccccccCC
Q 047705 559 GIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+|+.... .......+||+.||||
T Consensus 287 G~a~~~~~---~~~~~~~~gt~~y~aP 310 (419)
T 3i6u_A 287 GHSKILGE---TSLMRTLCGTPTYLAP 310 (419)
T ss_dssp STTTSCC--------------CTTCCT
T ss_pred ccceecCC---CccccccCCCCCccCc
Confidence 99987532 1223456799999999
No 198
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.95 E-value=7.6e-28 Score=241.67 Aligned_cols=180 Identities=24% Similarity=0.394 Sum_probs=151.1
Q ss_pred ccCHHHHHHhcCCCCccceecccCceEEEEEEe------CCCcEEEEEEEechh-hhhHHHHHHHHHHHHhc-CCCccee
Q 047705 403 TFSYLELCRATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-RRAFKSFDVECEIMKSI-RHRNLIK 474 (585)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~ 474 (585)
.+.........++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345556666778999999999999999999974 256889999997543 23456788999999999 7899999
Q ss_pred EEeeeecCC-eEEEEEEccCCCCHHHHhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcEEc
Q 047705 475 VISSCSNEE-FKGLVLEYMPQGSLEKHLYSTNCI---------------LDIFQRLNIMIDVASALEYLHFGCSTPVIHC 538 (585)
Q Consensus 475 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~ 538 (585)
+++++...+ ..++||||+++++|.+++...... +++..+..++.|++.||.||| +++|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999987654 589999999999999999875432 788999999999999999999 8999999
Q ss_pred CCCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 539 DLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 539 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc
Confidence 99999999999999999999999876443333334456789999998
No 199
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.95 E-value=3.6e-27 Score=234.64 Aligned_cols=167 Identities=19% Similarity=0.233 Sum_probs=145.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|+++++.+ +|++++++++++...+..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 367999999999999999999864 78999999986443 335678899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc-----EEEeeeccccccc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI-----AYLSDFGIAKLLI 565 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~ 565 (585)
|+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877667999999999999999999999 999999999999999987776 9999999998765
Q ss_pred CCCCc-----cccccccccccccCC
Q 047705 566 GEDQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~-----~~~~~~~gt~~y~aP 585 (585)
..... .......||+.|+||
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aP 187 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSI 187 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred cccccccccccCccCCCCCcccCCc
Confidence 33221 123456799999998
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=1.2e-27 Score=254.82 Aligned_cols=166 Identities=25% Similarity=0.416 Sum_probs=144.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999876 78999999997542 234567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC---CCCcEEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD---DNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~ 566 (585)
|||++|+|.+.+.... .+++..+..++.|++.||.||| +++|+||||||+||+++ .++.+||+|||+|+....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 6899999999999999999999 89999999999999995 566899999999986532
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
. ......+||+.|+||
T Consensus 177 ~---~~~~~~~gt~~y~aP 192 (486)
T 3mwu_A 177 N---TKMKDRIGTAYYIAP 192 (486)
T ss_dssp C-------CCTTGGGGCCG
T ss_pred C---CccCCCcCCCCCCCH
Confidence 2 223456799999998
No 201
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.95 E-value=8.1e-28 Score=238.39 Aligned_cols=167 Identities=27% Similarity=0.459 Sum_probs=131.7
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|++. ..||+|+++.. .....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 367999999999999999999864 35999998754 234557789999999999999999999965 4556899999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877667999999999999999999999 899999999999999999999999999999865432323
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 177 ~~~~~~~gt~~y~aP 191 (289)
T 3og7_A 177 HQFEQLSGSILWMAP 191 (289)
T ss_dssp -------CCCTTCCH
T ss_pred ccccccCCCccccCc
Confidence 333456799999998
No 202
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95 E-value=8.3e-28 Score=237.27 Aligned_cols=168 Identities=24% Similarity=0.370 Sum_probs=132.5
Q ss_pred cCCCCccceecccCceEEEEEEeCC----CcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|++.. +..||+|++... .....+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4679999999999999999998642 456999987653 2344567889999999999999999999984 467899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999876432
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ........+|+.|+||
T Consensus 170 ~-~~~~~~~~~~~~y~aP 186 (281)
T 1mp8_A 170 T-YYKASKGKLPIKWMAP 186 (281)
T ss_dssp ----------CCGGGCCH
T ss_pred c-ccccccCCCcccccCh
Confidence 2 1222344578899998
No 203
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=2.5e-27 Score=236.13 Aligned_cols=167 Identities=30% Similarity=0.452 Sum_probs=137.9
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHh--cCCCcceeEEeeeec----CCeEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS--IRHRNLIKVISSCSN----EEFKG 486 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 486 (585)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.+++.. ++||||+++++++.. .+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999988 68899999987542 3445567777666 799999999998644 34689
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcEEcCCCCCCEEeCCCCcEEEeeeccc
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG-----CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA 561 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a 561 (585)
+||||+++|+|.++++.. .+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 589999999999999999999932 1579999999999999999999999999999
Q ss_pred ccccCCCCcc--ccccccccccccCC
Q 047705 562 KLLIGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~~~--~~~~~~gt~~y~aP 585 (585)
+......... ......||+.|+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aP 186 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAP 186 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCH
T ss_pred eecccccccccccccccccccceeCh
Confidence 8654332211 12345799999998
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=2.8e-27 Score=242.36 Aligned_cols=170 Identities=31% Similarity=0.453 Sum_probs=147.9
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--------hhhHHHHHHHHHHHHhc-CCCcceeEEee
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------RRAFKSFDVECEIMKSI-RHRNLIKVISS 478 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 478 (585)
.....++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445567999999999999999999986 79999999987542 12245678899999999 89999999999
Q ss_pred eecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeee
Q 047705 479 CSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDF 558 (585)
Q Consensus 479 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Df 558 (585)
+...+..|+||||++|++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 999999999999999999999998653 6899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccCC
Q 047705 559 GIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|++..+.... .....+||+.|+||
T Consensus 245 G~~~~~~~~~---~~~~~~gt~~y~aP 268 (365)
T 2y7j_A 245 GFSCHLEPGE---KLRELCGTPGYLAP 268 (365)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCH
T ss_pred CcccccCCCc---ccccCCCCCCccCh
Confidence 9998764322 23456799999998
No 205
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=5.6e-28 Score=241.02 Aligned_cols=169 Identities=26% Similarity=0.392 Sum_probs=142.4
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467999999999999999999976 689999999876655566788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999998876567899999999999999999999 899999999999999999999999999997643211 1
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 172 ~~~~~~~~~~~y~aP 186 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAP 186 (302)
T ss_dssp HC-----CCGGGCCH
T ss_pred cccccccCChhhcCC
Confidence 112345789999998
No 206
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=2.4e-27 Score=234.66 Aligned_cols=162 Identities=30% Similarity=0.523 Sum_probs=140.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhh-------hHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRR-------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 67999999999999999999875 7899999998643211 1267889999999999999999999987665
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeCCCCc-----EEEeee
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLDDNMI-----AYLSDF 558 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~~~~~-----~kl~Df 558 (585)
++||||+++|+|.+++......+++..+..++.|++.||+||| +++ |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999999877778999999999999999999999 888 999999999999987776 999999
Q ss_pred cccccccCCCCccccccccccccccCC
Q 047705 559 GIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+++.... ......||+.|+||
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aP 195 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAP 195 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCG
T ss_pred Cccccccc-----cccccCCCccccCc
Confidence 99985321 23446799999998
No 207
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=1.7e-27 Score=243.86 Aligned_cols=175 Identities=28% Similarity=0.338 Sum_probs=150.2
Q ss_pred ccccCHHHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-----CCccee
Q 047705 401 WRTFSYLELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-----HRNLIK 474 (585)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 474 (585)
...+++.+.....++|++.+.||+|+||.||+|++. +++.||||+++.. ......+..|+++++.+. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 345666666677789999999999999999999875 7899999998743 234456778999999986 999999
Q ss_pred EEeeeecCCeEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC----
Q 047705 475 VISSCSNEEFKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---- 549 (585)
Q Consensus 475 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---- 549 (585)
+++++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 899999998754 35889999999999999999999 899999999999999975
Q ss_pred ---------------------CCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 550 ---------------------NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 550 ---------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++.+||+|||+|+.... ......||+.|+||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aP 228 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAP 228 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCc
Confidence 78999999999986432 12346799999998
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=2.9e-27 Score=252.96 Aligned_cols=167 Identities=26% Similarity=0.442 Sum_probs=142.9
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh-------------hhHHHHHHHHHHHHhcCCCcceeEEe
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-------------RAFKSFDVECEIMKSIRHRNLIKVIS 477 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 477 (585)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3468999999999999999999876 688999999875421 23467889999999999999999999
Q ss_pred eeecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC---cEE
Q 047705 478 SCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM---IAY 554 (585)
Q Consensus 478 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~---~~k 554 (585)
++...+..|+|||||+||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999987654 6899999999999999999999 89999999999999998765 699
Q ss_pred EeeecccccccCCCCccccccccccccccCC
Q 047705 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 555 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+|||+|+..... ......+||+.|+||
T Consensus 190 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aP 217 (504)
T 3q5i_A 190 IVDFGLSSFFSKD---YKLRDRLGTAYYIAP 217 (504)
T ss_dssp ECCCTTCEECCTT---SCBCCCCSCTTTCCH
T ss_pred EEECCCCEEcCCC---CccccccCCcCCCCH
Confidence 9999999876432 223456799999998
No 209
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2e-26 Score=225.85 Aligned_cols=207 Identities=24% Similarity=0.290 Sum_probs=157.0
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV 164 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 164 (585)
+++++++++|.++.+ |. .++..+++|++++|++++..+..|..+++|++|+|++|.++.+.+..|.++++|++|+
T Consensus 17 ~~~~l~~~~~~l~~i-p~----~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAI-PS----NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp TTTEEECTTSCCSSC-CS----CCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCEEEccCCCCCcc-CC----CCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 344555555555432 21 1122355555555555555556677788888888888888877777778888888888
Q ss_pred ccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCC
Q 047705 165 LDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIP 244 (585)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 244 (585)
|++|++++..+..|..+++|++|+|++|.+++..+.. +..+++|+.|++++|.+++..+
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------------~~~l~~L~~L~Ls~n~l~~~~~ 150 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV---------------------FDSLTKLTYLSLGYNELQSLPK 150 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT---------------------TTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH---------------------hCcCcCCCEEECCCCcCCccCH
Confidence 8888888777777778888888888888887654443 3455667777778888887777
Q ss_pred cccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCC
Q 047705 245 KEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 245 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 317 (585)
..|..+++|+.|+|++|+++++.+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+|.|.|+.
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 7788899999999999999988777889999999999999999987777788899999999999999998874
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=1.6e-27 Score=254.43 Aligned_cols=165 Identities=24% Similarity=0.408 Sum_probs=140.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
++|++.+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46999999999999999999976 78899999987542 2335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeecccccccCC
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~ 567 (585)
||++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++. ++.+||+|||+|+.....
T Consensus 117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999999887654 6889999999999999999999 899999999999999975 456999999999876432
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
......+||++|+||
T Consensus 193 ---~~~~~~~gt~~y~aP 207 (494)
T 3lij_A 193 ---KKMKERLGTAYYIAP 207 (494)
T ss_dssp ---BCBCCCCSCTTTCCH
T ss_pred ---ccccccCCCcCeeCH
Confidence 223456799999998
No 211
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.95 E-value=3.3e-27 Score=233.35 Aligned_cols=165 Identities=29% Similarity=0.439 Sum_probs=144.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999876 67889999987542 22346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999998754 6889999999999999999999 999999999999999999999999999998764321
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 168 ---~~~~~~~~~~y~aP 181 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPP 181 (284)
T ss_dssp ---CBCCCCSCGGGCCH
T ss_pred ---ccccccCCCCcCCH
Confidence 22346799999998
No 212
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=1.1e-27 Score=252.95 Aligned_cols=164 Identities=27% Similarity=0.327 Sum_probs=135.0
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC------
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE------ 482 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 482 (585)
..++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999876 6899999999754 334457788999999999999999999998654
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 357999999965 57666653 4789999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .......+||++|+||
T Consensus 213 ~~~~---~~~~~~~~gt~~y~aP 232 (464)
T 3ttj_A 213 TAGT---SFMMTPYVVTRYYRAP 232 (464)
T ss_dssp -------CCCC----CCCTTCCH
T ss_pred ecCC---CcccCCCcccccccCH
Confidence 6532 2223557899999998
No 213
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=3.7e-27 Score=235.85 Aligned_cols=167 Identities=29% Similarity=0.420 Sum_probs=137.8
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-----hhhHHHHHHHHHHHHhc---CCCcceeEEeeeecC
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-----RRAFKSFDVECEIMKSI---RHRNLIKVISSCSNE 482 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 482 (585)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999964 78999999987432 11224566777777766 499999999998775
Q ss_pred C-----eEEEEEEccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEe
Q 047705 483 E-----FKGLVLEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLS 556 (585)
Q Consensus 483 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~ 556 (585)
. ..++||||++ ++|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999996 599999987653 4899999999999999999999 8999999999999999999999999
Q ss_pred eecccccccCCCCccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||+|+..... .......||+.|+||
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aP 188 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAP 188 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCH
T ss_pred eCccccccCCC---cccCCccccccccCc
Confidence 99999865322 223456799999998
No 214
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.94 E-value=2.6e-27 Score=245.41 Aligned_cols=162 Identities=25% Similarity=0.334 Sum_probs=130.5
Q ss_pred cCCCCcc-ceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHh-cCCCcceeEEeeeec----CCeE
Q 047705 413 TDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKS-IRHRNLIKVISSCSN----EEFK 485 (585)
Q Consensus 413 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~ 485 (585)
.++|.+. +.||+|+||.||+|++. +++.||||+++.. ..+.+|++++.+ .+||||++++++|.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3567666 78999999999999876 6899999998643 345678888754 589999999998865 5678
Q ss_pred EEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeeccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIA 561 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~a 561 (585)
|+|||||+||+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999998754 36899999999999999999999 899999999999999987 789999999999
Q ss_pred ccccCCCCccccccccccccccCC
Q 047705 562 KLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+..... ......+||+.||||
T Consensus 212 ~~~~~~---~~~~~~~gt~~y~aP 232 (400)
T 1nxk_A 212 KETTSH---NSLTTPCYTPYYVAP 232 (400)
T ss_dssp EECC--------------CTTCCG
T ss_pred cccCCC---CccccCCCCCCccCH
Confidence 865322 223456899999998
No 215
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.94 E-value=2.4e-27 Score=236.39 Aligned_cols=169 Identities=27% Similarity=0.394 Sum_probs=139.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeec----------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN---------- 481 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 481 (585)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457999999999999999999875 7899999998654 3345778899999999999999999998754
Q ss_pred ---CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeee
Q 047705 482 ---EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDF 558 (585)
Q Consensus 482 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Df 558 (585)
.+..|+||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 35779999999999999999877667888899999999999999999 899999999999999999999999999
Q ss_pred cccccccCCC------------CccccccccccccccCC
Q 047705 559 GIAKLLIGED------------QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~------------~~~~~~~~~gt~~y~aP 585 (585)
|.++...... .........||+.|+||
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 199 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCc
Confidence 9998653211 01122456789999998
No 216
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94 E-value=9.1e-28 Score=253.35 Aligned_cols=169 Identities=23% Similarity=0.438 Sum_probs=144.4
Q ss_pred HhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
...++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..|+|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3456789999999999999999999888999999997543 34678999999999999999999999986 567899999
Q ss_pred ccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 491 YMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
|+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~- 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-
Confidence 999999999997543 25788899999999999999999 8999999999999999999999999999998753211
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
........+|+.|+||
T Consensus 339 ~~~~~~~~~~~~y~aP 354 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAP 354 (454)
T ss_dssp HHTTCSSSSCGGGSCH
T ss_pred eeccCCCcccccccCH
Confidence 1122344567889998
No 217
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=3.8e-27 Score=233.14 Aligned_cols=164 Identities=23% Similarity=0.353 Sum_probs=141.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++... .......+.+|+..+..+ +||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999876 7899999998754 233456788899999999 999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC---------------
Q 047705 489 LEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN--------------- 550 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~--------------- 550 (585)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 36899999999999999999999 8999999999999999844
Q ss_pred ----CcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 551 ----MIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 551 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..+||+|||.+...... ....||+.|+||
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aP 199 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLAN 199 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCH
T ss_pred cCCceEEEEcccccccccCCc------cccCCCccccCh
Confidence 47999999999875322 224589999998
No 218
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=1.4e-27 Score=254.39 Aligned_cols=165 Identities=27% Similarity=0.447 Sum_probs=145.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56999999999999999999876 78999999987542 334577889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 566 (585)
||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+|+....
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999987654 6899999999999999999999 8999999999999999 4678999999999987643
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
.. .....+||+.|+||
T Consensus 182 ~~---~~~~~~gt~~y~aP 197 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAP 197 (484)
T ss_dssp CC---SHHHHTTGGGTCCH
T ss_pred cc---ccccCCCCccccCc
Confidence 22 23456799999998
No 219
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94 E-value=2.1e-27 Score=243.29 Aligned_cols=174 Identities=23% Similarity=0.295 Sum_probs=141.5
Q ss_pred CHHHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh-----------hhhHHHHHHHHHHHHhcCCCcce
Q 047705 405 SYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC-----------RRAFKSFDVECEIMKSIRHRNLI 473 (585)
Q Consensus 405 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv 473 (585)
...++....++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567778889999999999999999999998889999999985431 12236788999999999999999
Q ss_pred eEEeeeec-----CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC
Q 047705 474 KVISSCSN-----EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD 548 (585)
Q Consensus 474 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~ 548 (585)
++++++.. ....|+||||++ |++.+++......+++..+..++.|++.||.||| +++|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 99999843 346899999997 6899988877667999999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 549 DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 549 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.++.+||+|||+++..... .......||+.|+||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aP 202 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAP 202 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCH
T ss_pred CCCCEEEEecCcccccccc---cccceecccceecCc
Confidence 9999999999999854322 223456789999998
No 220
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.94 E-value=4.3e-27 Score=231.43 Aligned_cols=167 Identities=28% Similarity=0.426 Sum_probs=139.1
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 4478999999999999999999976 78999999997543 2235678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 999999999999997654 6889999999999999999999 899999999999999999999999999999865322
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ......||+.|+||
T Consensus 165 ~---~~~~~~~~~~y~aP 179 (276)
T 2h6d_A 165 E---FLRTSCGSPNYAAP 179 (276)
T ss_dssp ---------------CCT
T ss_pred c---ceecccCCccccCH
Confidence 1 22345789999998
No 221
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=7.5e-28 Score=238.41 Aligned_cols=171 Identities=27% Similarity=0.455 Sum_probs=148.3
Q ss_pred HHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
....++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 345578999999999999999999876 58899999987543 3457788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 489 LEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|||+++++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999999998743 35899999999999999999999 899999999999999999999999999999876433
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ........||+.|+||
T Consensus 165 ~-~~~~~~~~~~~~y~aP 181 (288)
T 3kfa_A 165 T-YTAHAGAKFPIKWTAP 181 (288)
T ss_dssp S-SEEETTEEECGGGCCH
T ss_pred c-cccccCCccccCcCCh
Confidence 2 2233455678899998
No 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=6.6e-27 Score=232.79 Aligned_cols=168 Identities=27% Similarity=0.385 Sum_probs=146.1
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---------hhhHHHHHHHHHHHHhcC-CCcceeEEeee
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---------RRAFKSFDVECEIMKSIR-HRNLIKVISSC 479 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 479 (585)
...++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999876 68999999997542 223467788999999995 99999999999
Q ss_pred ecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeec
Q 047705 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559 (585)
Q Consensus 480 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 559 (585)
...+..++||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999998653 6899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.+....... ......||+.|+||
T Consensus 170 ~~~~~~~~~---~~~~~~~~~~y~aP 192 (298)
T 1phk_A 170 FSCQLDPGE---KLREVCGTPSYLAP 192 (298)
T ss_dssp TCEECCTTC---CBCCCCSCGGGCCH
T ss_pred chhhcCCCc---ccccccCCccccCH
Confidence 998754322 22446789999998
No 223
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.94 E-value=1.4e-27 Score=244.72 Aligned_cols=169 Identities=21% Similarity=0.283 Sum_probs=138.0
Q ss_pred cCCCCccceecccCceEEEEEEeCC------CcEEEEEEEechhhhh-----------HHHHHHHHHHHHhcCCCcceeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQCRRA-----------FKSFDVECEIMKSIRHRNLIKV 475 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 475 (585)
.++|++.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998754 4789999987543211 1233456667778899999999
Q ss_pred EeeeecC----CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC--C
Q 047705 476 ISSCSNE----EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD--D 549 (585)
Q Consensus 476 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~--~ 549 (585)
++++... ...|+||||+ |++|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4589999999 99999999887668999999999999999999999 89999999999999998 8
Q ss_pred CCcEEEeeecccccccCCCCcc-----ccccccccccccCC
Q 047705 550 NMIAYLSDFGIAKLLIGEDQSM-----TQTQTLATIGYMAP 585 (585)
Q Consensus 550 ~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aP 585 (585)
++.+||+|||+|+.+....... .....+||+.||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 230 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI 230 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence 8999999999998764322111 12345699999998
No 224
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=1.5e-27 Score=254.28 Aligned_cols=168 Identities=27% Similarity=0.468 Sum_probs=145.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|++. ++..||||+++... ...+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 456889999999999999999976 48899999987543 2457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 99999999998643 36889999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......+++.|+||
T Consensus 374 ~~~~~~~~~~~y~aP 388 (495)
T 1opk_A 374 TAHAGAKFPIKWTAP 388 (495)
T ss_dssp ECCTTCCCCGGGCCH
T ss_pred eecCCCcCCcceeCH
Confidence 222345577899998
No 225
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=2.3e-27 Score=236.89 Aligned_cols=165 Identities=25% Similarity=0.410 Sum_probs=142.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++.......+.+.+|+++++.++||||+++++++...+..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 357899999999999999999876 7899999999865444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeecccccccCCC
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 99999999987654 6889999999999999999999 8999999999999999 7888999999999875422
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 162 --~~~~~~~~~~~y~aP 176 (304)
T 2jam_A 162 --GIMSTACGTPGYVAP 176 (304)
T ss_dssp --BTTHHHHSCCCBCCT
T ss_pred --CccccccCCCCccCh
Confidence 122345799999998
No 226
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.94 E-value=2.7e-27 Score=235.68 Aligned_cols=169 Identities=28% Similarity=0.427 Sum_probs=140.3
Q ss_pred CCCCccceecccCceEEEEEEeCC----CcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeee-ecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 487 (585)
..|++.+.||+|+||.||+|++.+ ...||+|.+... .....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468889999999999999998642 235899988653 334557788999999999999999999985 45568899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999865432
Q ss_pred CC--ccccccccccccccCC
Q 047705 568 DQ--SMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~--~~~~~~~~gt~~y~aP 585 (585)
.. ........||+.|+||
T Consensus 182 ~~~~~~~~~~~~~~~~y~aP 201 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMAL 201 (298)
T ss_dssp GGCBC-----CCBCGGGSCH
T ss_pred chhccccccCCCCCccccCh
Confidence 21 1223455688899998
No 227
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.94 E-value=4.1e-27 Score=232.44 Aligned_cols=165 Identities=28% Similarity=0.406 Sum_probs=141.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh------hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR------RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46899999999999999999876 689999999875421 13577899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC----cEEEeeecccc
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM----IAYLSDFGIAK 562 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~a~ 562 (585)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997643 6899999999999999999999 89999999999999998777 89999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
...... ......||+.|+||
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aP 180 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAP 180 (283)
T ss_dssp ECC-----------CCCGGGCCH
T ss_pred eccCCC---cccccCCCcCccCc
Confidence 653221 22345789999998
No 228
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94 E-value=3e-27 Score=249.00 Aligned_cols=163 Identities=31% Similarity=0.453 Sum_probs=140.0
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC-eEEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-FKGLVLE 490 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 490 (585)
..++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..|+|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3467889999999999999999885 7799999997543 4577899999999999999999999987654 7899999
Q ss_pred ccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 491 YMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
|+++|+|.+++..... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999987543 4688999999999999999999 899999999999999999999999999999854211
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.....+++.|+||
T Consensus 343 ---~~~~~~~~~y~aP 355 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAP 355 (450)
T ss_dssp -------CCCTTTSCH
T ss_pred ---ccCCCCCcceeCH
Confidence 1223578899998
No 229
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.94 E-value=2.8e-27 Score=241.28 Aligned_cols=169 Identities=25% Similarity=0.400 Sum_probs=143.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeec--------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSN-------- 481 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 481 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999875 78999999986542 2234567789999999999999999999876
Q ss_pred CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccc
Q 047705 482 EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIA 561 (585)
Q Consensus 482 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a 561 (585)
.+..|+||||+++ ++.+.+......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999965 888888776667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCC--ccccccccccccccCC
Q 047705 562 KLLIGEDQ--SMTQTQTLATIGYMAP 585 (585)
Q Consensus 562 ~~~~~~~~--~~~~~~~~gt~~y~aP 585 (585)
+.+..... ........||+.|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPP 197 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred ccccccccccccccCCcccccCccCc
Confidence 87642221 1223456789999998
No 230
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.94 E-value=3.1e-27 Score=238.45 Aligned_cols=169 Identities=29% Similarity=0.474 Sum_probs=145.2
Q ss_pred CCCCccceecccCceEEEEEEe-----CCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC--eEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 486 (585)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5689999999999999999984 368899999998766666678999999999999999999999987654 679
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999887667899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcc-ccccccccccccCC
Q 047705 567 EDQSM-TQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~-~~~~~~gt~~y~aP 585 (585)
..... ......+++.|+||
T Consensus 198 ~~~~~~~~~~~~~~~~y~aP 217 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAP 217 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCH
T ss_pred cccccccccCCCCceeEECc
Confidence 32211 12334577889998
No 231
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2e-27 Score=243.59 Aligned_cols=162 Identities=27% Similarity=0.372 Sum_probs=135.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------ 483 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 483 (585)
.++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 468999999999999999999875 7899999998543 2334567889999999999999999999987663
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
..|+||||+ +++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999999874 5889999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
... .....+||++|+||
T Consensus 178 ~~~-----~~~~~~~t~~y~aP 194 (367)
T 1cm8_A 178 ADS-----EMTGYVVTRWYRAP 194 (367)
T ss_dssp CCS-----SCCSSCSCGGGCCT
T ss_pred ccc-----ccCcCcCCCCcCCH
Confidence 532 23456799999999
No 232
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94 E-value=3e-27 Score=239.11 Aligned_cols=167 Identities=28% Similarity=0.433 Sum_probs=139.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 367999999999999999999876 58999999986542 234566788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||++++++.++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988888765543 6899999999999999999999 8999999999999999999999999999998654322
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 179 -~~~~~~~~t~~y~aP 193 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAP 193 (331)
T ss_dssp ------CCCCCTTCCH
T ss_pred -cccCCCcCCccccCc
Confidence 222445789999998
No 233
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.94 E-value=1.5e-27 Score=244.13 Aligned_cols=164 Identities=24% Similarity=0.366 Sum_probs=143.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57999999999999999999876 7899999998765 334457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
+++++|.+++.... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999998754 6889999999999999999999 75 9999999999999999999999999999765321
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 186 -~~~~~~gt~~y~aP 199 (360)
T 3eqc_A 186 -MANSFVGTRSYMSP 199 (360)
T ss_dssp -C----CCCCTTCCH
T ss_pred -cccCCCCCCCeECH
Confidence 22345799999998
No 234
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.3e-27 Score=241.27 Aligned_cols=169 Identities=27% Similarity=0.412 Sum_probs=135.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcE----EEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
.++|++.+.||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++...+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999865 4554 466666433 2335578889999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887778999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCccccccccccccccCC
Q 047705 567 EDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aP 585 (585)
...........||+.|+||
T Consensus 170 ~~~~~~~~~~~~t~~y~aP 188 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp ----------CCCGGGSCH
T ss_pred ccccccccCCCccccccCH
Confidence 3333334455678899998
No 235
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=7.2e-27 Score=233.16 Aligned_cols=165 Identities=28% Similarity=0.413 Sum_probs=145.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
+.|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56899999999999999999865 78999999997553 34467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCcc
Q 047705 492 MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSM 571 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 571 (585)
+++++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+....... .
T Consensus 102 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 174 (303)
T 3a7i_A 102 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 174 (303)
T ss_dssp CTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--C
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--c
Confidence 9999999998753 5899999999999999999999 8999999999999999999999999999998754322 2
Q ss_pred ccccccccccccCC
Q 047705 572 TQTQTLATIGYMAP 585 (585)
Q Consensus 572 ~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 175 ~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 175 KRNTFVGTPFWMAP 188 (303)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCccCCCcCccCH
Confidence 23456799999998
No 236
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=7.2e-27 Score=236.76 Aligned_cols=168 Identities=30% Similarity=0.427 Sum_probs=137.9
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhc--CCCcceeEEeeeecC----
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI--RHRNLIKVISSCSNE---- 482 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~---- 482 (585)
.....++|++.+.||+|+||.||+|++. ++.||||++..... ..+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3444568999999999999999999885 88999999865432 3344556665554 899999999998877
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CcEEcCCCCCCEEeCCCCcEE
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST--------PVIHCDLKPSNVLLDDNMIAY 554 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~--------~iiH~dlkp~NIll~~~~~~k 554 (585)
+..++||||+++|+|.+++... .+++..++.++.|++.||+||| .. +|+||||||+||+++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6889999999999999999765 5889999999999999999999 77 999999999999999999999
Q ss_pred EeeecccccccCCCCcc--ccccccccccccCC
Q 047705 555 LSDFGIAKLLIGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 555 l~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aP 585 (585)
|+|||+|+......... ......||+.|+||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 215 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCH
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeCh
Confidence 99999998654322211 12345799999998
No 237
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.94 E-value=1.2e-27 Score=241.69 Aligned_cols=170 Identities=25% Similarity=0.374 Sum_probs=135.1
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
.....++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++..++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3455678999999999999999999865 78999999986542 22345677899999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe-----CCCCcEEEeeecc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL-----DDNMIAYLSDFGI 560 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll-----~~~~~~kl~Dfg~ 560 (585)
++||||++ |+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+
T Consensus 109 ~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99999997 59999998765 5899999999999999999999 8999999999999999 4556699999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+...... ......+||+.|+||
T Consensus 184 a~~~~~~~--~~~~~~~~t~~y~aP 206 (329)
T 3gbz_A 184 ARAFGIPI--RQFTHEIITLWYRPP 206 (329)
T ss_dssp HHHHC-------------CCTTCCH
T ss_pred ccccCCcc--cccCCCcCCccccCH
Confidence 98753221 223445789999998
No 238
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=3.6e-27 Score=238.60 Aligned_cols=169 Identities=27% Similarity=0.483 Sum_probs=137.5
Q ss_pred CCCCccceecccCceEEEEEEeCC-----CcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGD-----GMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
++|++.+.||+|+||.||+|++.. +..||+|+++.. .......+.+|+++++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467788999999999999997542 245999998754 23345678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999887667999999999999999999999 899999999999999999999999999999876432
Q ss_pred CCc-cccccccccccccCC
Q 047705 568 DQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aP 585 (585)
... .......+|+.|+||
T Consensus 201 ~~~~~~~~~~~~~~~y~aP 219 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAP 219 (333)
T ss_dssp ----------CCCGGGSCH
T ss_pred cccccccCCCCccccccCc
Confidence 211 122334568889998
No 239
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=237.86 Aligned_cols=170 Identities=24% Similarity=0.313 Sum_probs=142.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeee----cCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS----NEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++. ..+..|+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 357999999999999999999874 78999999987666666778899999999999999999999986 3457899
Q ss_pred EEEccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 488 VLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
||||+++|+|.+++.. ....+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3447899999999999999999999 899999999999999999999999999998764
Q ss_pred cCCCCcc-------ccccccccccccCC
Q 047705 565 IGEDQSM-------TQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~-------~~~~~~gt~~y~aP 585 (585)
....... ......||+.|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 212 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAP 212 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred ccccccccccccccccccccCCcccCCH
Confidence 3211100 11234679999998
No 240
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=1.9e-27 Score=234.38 Aligned_cols=168 Identities=25% Similarity=0.445 Sum_probs=143.5
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
..++|++.+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|+++++.++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 446799999999999999999998888899999987543 235678899999999999999999999864 468999999
Q ss_pred cCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
+++++|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||.++...... .
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-Y 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-E
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-c
Confidence 999999999975432 5889999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......+|+.|+||
T Consensus 165 ~~~~~~~~~~~y~aP 179 (279)
T 1qpc_A 165 TAREGAKFPIKWTAP 179 (279)
T ss_dssp ECCTTCCCCTTTSCH
T ss_pred ccccCCCCccCccCh
Confidence 222345678889998
No 241
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=4e-27 Score=235.75 Aligned_cols=171 Identities=25% Similarity=0.318 Sum_probs=139.2
Q ss_pred HHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
....++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 344578999999999999999999876 78899999987542 22346788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999999998754 6899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ........||+.|+||
T Consensus 186 ~~~-~~~~~~~~~~~~y~aP 204 (309)
T 2h34_A 186 DEK-LTQLGNTVGTLYYMAP 204 (309)
T ss_dssp ------------CCGGGCCG
T ss_pred ccc-cccccccCCCcCccCH
Confidence 322 1223356799999998
No 242
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.94 E-value=8e-27 Score=231.79 Aligned_cols=167 Identities=28% Similarity=0.420 Sum_probs=141.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEcc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
++|.....||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 45666779999999999999875 68899999998765556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC-CCcEEEeeecccccccCCCC
Q 047705 493 PQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD-NMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 493 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~ 569 (585)
++++|.+++..... ..++..+..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||.++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 99999999987533 4568888999999999999999 899999999999999987 8999999999998654221
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 178 -~~~~~~~~~~~y~aP 192 (295)
T 2clq_A 178 -PCTETFTGTLQYMAP 192 (295)
T ss_dssp ----CCCCCCGGGCCH
T ss_pred -CcccccCCCccccCh
Confidence 122345789999998
No 243
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.94 E-value=3.5e-27 Score=231.41 Aligned_cols=163 Identities=31% Similarity=0.483 Sum_probs=130.9
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh----hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC----RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
.++|++.+.||+|+||.||+|++. ++.||+|+++... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467999999999999999999974 8899999986542 22356788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---cEEcCCCCCCEEeCC--------CCcEEEee
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP---VIHCDLKPSNVLLDD--------NMIAYLSD 557 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~---iiH~dlkp~NIll~~--------~~~~kl~D 557 (585)
|||+++++|.+++... .+++..+..++.|++.|++||| +++ |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998654 6899999999999999999999 777 999999999999985 77899999
Q ss_pred ecccccccCCCCccccccccccccccCC
Q 047705 558 FGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 558 fg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||.++..... ......||+.|+||
T Consensus 160 fg~~~~~~~~----~~~~~~~~~~y~aP 183 (271)
T 3dtc_A 160 FGLAREWHRT----TKMSAAGAYAWMAP 183 (271)
T ss_dssp CCC-----------------CCGGGSCH
T ss_pred CCcccccccc----cccCCCCccceeCH
Confidence 9999865322 12345799999998
No 244
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.94 E-value=5.3e-27 Score=237.72 Aligned_cols=165 Identities=36% Similarity=0.530 Sum_probs=133.5
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHH--HHhcCCCcceeEEeeee-----cCCe
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEI--MKSIRHRNLIKVISSCS-----NEEF 484 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~~~ 484 (585)
..++|++.+.||+|+||.||+|+. +++.||||++..... ..+..|.++ +..++||||+++++.+. ....
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 457899999999999999999987 688999999975432 333344444 45689999999998543 2346
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CcEEcCCCCCCEEeCCCCcEEE
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST---------PVIHCDLKPSNVLLDDNMIAYL 555 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~---------~iiH~dlkp~NIll~~~~~~kl 555 (585)
.++||||+++|+|.+++.... .++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 789999999999999998764 588889999999999999999 77 9999999999999999999999
Q ss_pred eeecccccccCCCC------ccccccccccccccCC
Q 047705 556 SDFGIAKLLIGEDQ------SMTQTQTLATIGYMAP 585 (585)
Q Consensus 556 ~Dfg~a~~~~~~~~------~~~~~~~~gt~~y~aP 585 (585)
+|||+|+.+..... .......+||+.|+||
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred eeccceeecccccccCccccccccccCCCccceeCc
Confidence 99999987643221 1122355799999998
No 245
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=6.5e-27 Score=234.73 Aligned_cols=167 Identities=29% Similarity=0.376 Sum_probs=141.5
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ..+.+.+|+++++.++||||+++++++...+..|+|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567999999999999999999876 68999999987543 34678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
|+++++|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||.+.......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999999755557899999999999999999999 8999999999999999999999999999998654321
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 180 ~~~~~~~~~~~y~aP 194 (314)
T 3com_A 180 AKRNTVIGTPFWMAP 194 (314)
T ss_dssp SCBCCCCSCGGGCCH
T ss_pred cccCccCCCCCccCh
Confidence 223445789999998
No 246
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=5.7e-27 Score=232.01 Aligned_cols=168 Identities=26% Similarity=0.412 Sum_probs=142.5
Q ss_pred CCCCccc-eecccCceEEEEEEeC---CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 414 DGFSENN-LIGRGGFGSVYKARLG---DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 414 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
++|.+.+ .||+|+||.||+|.+. ++..||+|+++.. .....+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566666 9999999999999753 5778999999764 234567889999999999999999999999 45568999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999876667999999999999999999999 8999999999999999999999999999998764332
Q ss_pred Cc-cccccccccccccCC
Q 047705 569 QS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~-~~~~~~~gt~~y~aP 585 (585)
.. .......||+.|+||
T Consensus 165 ~~~~~~~~~~~~~~y~aP 182 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAP 182 (287)
T ss_dssp CEECCCCSSCCCGGGCCH
T ss_pred ceeeccccccccccccCH
Confidence 21 122344578999998
No 247
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=1.1e-26 Score=230.28 Aligned_cols=163 Identities=26% Similarity=0.382 Sum_probs=140.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeec----CCeEEE
Q 047705 415 GFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKGL 487 (585)
Q Consensus 415 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 487 (585)
.|++.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4788889999999999999875 6889999998754 23456778899999999999999999998865 456899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeC-CCCcEEEeeecccccc
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLD-DNMIAYLSDFGIAKLL 564 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~-~~~~~kl~Dfg~a~~~ 564 (585)
||||+++++|.+++.... .+++..+..++.|++.||.||| +.+ |+||||||+||+++ +++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999998754 6889999999999999999999 888 99999999999998 7899999999999754
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......||+.|+||
T Consensus 183 ~~~----~~~~~~~t~~y~aP 199 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAP 199 (290)
T ss_dssp CTT----SBEESCSSCCCCCG
T ss_pred ccc----ccccccCCcCcCCH
Confidence 321 22345799999998
No 248
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.94 E-value=1.1e-26 Score=233.59 Aligned_cols=165 Identities=28% Similarity=0.446 Sum_probs=140.5
Q ss_pred CCccceecccCceEEEEEEeC-----CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC--CeEEE
Q 047705 416 FSENNLIGRGGFGSVYKARLG-----DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFKGL 487 (585)
Q Consensus 416 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 487 (585)
|++.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 489999999999999998642 57889999997653 34467789999999999999999999999874 67899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++|+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999875 4889999999999999999999 899999999999999999999999999999876433
Q ss_pred CCc-cccccccccccccCC
Q 047705 568 DQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aP 585 (585)
... .......||+.|+||
T Consensus 188 ~~~~~~~~~~~~~~~y~aP 206 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAP 206 (318)
T ss_dssp CSEEEC---CCCCGGGCCH
T ss_pred ccccccccCCCCCceeeCh
Confidence 221 123445688899998
No 249
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.94 E-value=9.9e-27 Score=232.32 Aligned_cols=169 Identities=23% Similarity=0.364 Sum_probs=141.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh----hhhHHHHHHHHHHHHhcCCCcceeEEeeee--cCCeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC----RRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 485 (585)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999875 68899999997542 234577899999999999999999999984 44578
Q ss_pred EEEEEccCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 486 GLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
++||||++++ +.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77776653 346899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.............||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aP 180 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPP 180 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCH
T ss_pred CccccccccccCCCCCCCcCh
Confidence 433333333456799999998
No 250
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.94 E-value=4.6e-27 Score=230.36 Aligned_cols=162 Identities=22% Similarity=0.414 Sum_probs=142.1
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC--CeEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFKGLV 488 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 488 (585)
.++|++.+.||+|+||.||+|+++ ++.||+|+++... ....+.+.+|+.++++++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357999999999999999999984 8899999987542 34456789999999999999999999999887 788999
Q ss_pred EEccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 489 LEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +++ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987654 5899999999999999999999 888 9999999999999999999999999876421
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.....||+.|+||
T Consensus 165 -------~~~~~~t~~y~aP 177 (271)
T 3kmu_A 165 -------SPGRMYAPAWVAP 177 (271)
T ss_dssp -------CTTCBSCGGGSCH
T ss_pred -------ccCccCCccccCh
Confidence 1235689999998
No 251
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=3.5e-27 Score=240.30 Aligned_cols=165 Identities=24% Similarity=0.396 Sum_probs=145.5
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhh-----------------HHHHHHHHHHHHhcCCCcceeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRA-----------------FKSFDVECEIMKSIRHRNLIKV 475 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 475 (585)
.++|++.+.||+|+||.||+|++ +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 47899999999999999999998 89999999997553211 1788999999999999999999
Q ss_pred EeeeecCCeEEEEEEccCCCCHHHH------hhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCcEEcCCCCCCEEe
Q 047705 476 ISSCSNEEFKGLVLEYMPQGSLEKH------LYST-NCILDIFQRLNIMIDVASALEYLHFGCS-TPVIHCDLKPSNVLL 547 (585)
Q Consensus 476 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~iiH~dlkp~NIll 547 (585)
++++...+..++||||+++++|.++ +... ...+++..+..++.|++.||.||| + ++|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 347899999999999999999999 7 999999999999999
Q ss_pred CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||.+...... ......||+.|+||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aP 219 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPP 219 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCG
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCc
Confidence 99999999999999875322 23456799999998
No 252
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=8.8e-27 Score=233.34 Aligned_cols=169 Identities=28% Similarity=0.437 Sum_probs=134.7
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech---hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .......+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3467999999999999999999865 7899999998753 23455778899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 488 VLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
||||+++++|.+++.. ....+++..++.++.|++.||.||| +++++||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999864 2346889999999999999999999 899999999999999999999999999999865
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .......||+.|+||
T Consensus 187 ~~~~--~~~~~~~~~~~y~aP 205 (310)
T 2wqm_A 187 SSKT--TAAHSLVGTPYYMSP 205 (310)
T ss_dssp --------------CCSSCCH
T ss_pred cCCC--ccccccCCCeeEeCh
Confidence 4222 122345789999998
No 253
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.94 E-value=3.4e-27 Score=238.27 Aligned_cols=170 Identities=24% Similarity=0.400 Sum_probs=139.7
Q ss_pred cCCCCccceecccCceEEEEEEe------CCCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
.++|++.+.||+|+||.||+|++ .+++.||||++... .......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36799999999999999999983 25778999998643 334456788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEe
Q 047705 486 GLVLEYMPQGSLEKHLYSTN------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLS 556 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~ 556 (585)
|+||||+++++|.+++.... ..+++..++.++.|++.||.||| +++|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998754 34888999999999999999999 899999999999999984 4469999
Q ss_pred eecccccccCCCCccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||+++...............||+.|+||
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPP 214 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred ccccccccccccccccCCCcCCCcceeCH
Confidence 99999865433322333455789999998
No 254
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.94 E-value=2.2e-27 Score=250.24 Aligned_cols=168 Identities=26% Similarity=0.462 Sum_probs=138.6
Q ss_pred hcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEc
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEY 491 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 491 (585)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 346788999999999999999999888889999987543 234678999999999999999999999876 678999999
Q ss_pred cCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 99999999997532 35889999999999999999999 8999999999999999999999999999998754322 1
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.......+|+.|+||
T Consensus 336 ~~~~~~~~~~~y~aP 350 (452)
T 1fmk_A 336 TARQGAKFPIKWTAP 350 (452)
T ss_dssp -------CCGGGSCH
T ss_pred ecccCCcccccccCH
Confidence 222345578899998
No 255
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.5e-27 Score=257.03 Aligned_cols=156 Identities=20% Similarity=0.143 Sum_probs=123.5
Q ss_pred eecccCceEEEEEEe-CCCcEEEEEEEech----------hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEE
Q 047705 421 LIGRGGFGSVYKARL-GDGMEVAVKVFNLQ----------CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 421 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 488 (585)
..+.|+.|.+..++. -.|+.||+|++... .....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 355667776666543 25889999998643 234457799999999999 799999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++|++|.+++.+.. .+++. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998764 56654 58899999999999 9999999999999999999999999999998764322
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......+||++||||
T Consensus 394 --~~~~t~vGTp~YmAP 408 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVN 408 (569)
T ss_dssp --CCSHHHHHHHHHHHH
T ss_pred --ccccCceechhhccH
Confidence 233457899999998
No 256
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=4.9e-27 Score=233.68 Aligned_cols=168 Identities=23% Similarity=0.382 Sum_probs=140.9
Q ss_pred CCCccceecccCceEEEEEEeC-C---CcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE-EEE
Q 047705 415 GFSENNLIGRGGFGSVYKARLG-D---GMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK-GLV 488 (585)
Q Consensus 415 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 488 (585)
.|...+.||+|+||.||+|++. + +..||+|++.... ....+.+.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4566789999999999999753 2 2379999987532 34557888999999999999999999999876655 999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+.+|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999886667899999999999999999999 8999999999999999999999999999998654322
Q ss_pred --CccccccccccccccCC
Q 047705 569 --QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 --~~~~~~~~~gt~~y~aP 585 (585)
.........||+.|+||
T Consensus 179 ~~~~~~~~~~~~~~~y~aP 197 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTAL 197 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCH
T ss_pred ccccccCcCCCCCccccCh
Confidence 11222445688899998
No 257
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.94 E-value=1.8e-27 Score=237.30 Aligned_cols=174 Identities=25% Similarity=0.363 Sum_probs=128.0
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
.....++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3445678999999999999999999865 78899999886542 334567888999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeec
Q 047705 487 LVLEYMPQGSLEKHLYS-------TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 559 (585)
+||||+++++|.+++.. ....+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence 99999999999999874 2346899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCC---ccccccccccccccCC
Q 047705 560 IAKLLIGEDQ---SMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~---~~~~~~~~gt~~y~aP 585 (585)
++........ ........||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 195 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAP 195 (303)
T ss_dssp HHHHCC---------------CCCTTCCH
T ss_pred chheeccCCCccchhhhcccCCCccccCH
Confidence 9886543211 1112345799999998
No 258
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.6e-27 Score=237.88 Aligned_cols=176 Identities=28% Similarity=0.362 Sum_probs=143.2
Q ss_pred cCHHHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 047705 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSN 481 (585)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 481 (585)
+++.++....++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344455566788999999999999999999875 78999999987543 2346788899999999 89999999999976
Q ss_pred ------CCeEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEE
Q 047705 482 ------EEFKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAY 554 (585)
Q Consensus 482 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~k 554 (585)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999998653 36889999999999999999999 89999999999999999999999
Q ss_pred EeeecccccccCCCCccccccccccccccCC
Q 047705 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 555 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+|||++....... .......||+.|+||
T Consensus 170 l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aP 198 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAP 198 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCH
T ss_pred EeeCcCceecCcCc--cccccccCCccccCh
Confidence 99999988653211 122345799999998
No 259
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=5.6e-27 Score=236.09 Aligned_cols=165 Identities=28% Similarity=0.372 Sum_probs=137.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--------hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE 483 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 483 (585)
.++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999876 68899999986432 122346788999999999999999999987665
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc---EEEeeecc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI---AYLSDFGI 560 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~ 560 (585)
.|+||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 899999999999999987654 6899999999999999999999 899999999999999986654 99999999
Q ss_pred cccccCCCCccccccccccccccCC
Q 047705 561 AKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 561 a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++.... ........||+.|+||
T Consensus 164 ~~~~~~---~~~~~~~~gt~~y~aP 185 (322)
T 2ycf_A 164 SKILGE---TSLMRTLCGTPTYLAP 185 (322)
T ss_dssp CEECCC---CHHHHHHHSCCTTCCH
T ss_pred ceeccc---ccccccccCCcCccCc
Confidence 986532 1122345799999998
No 260
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.94 E-value=6e-27 Score=234.86 Aligned_cols=175 Identities=26% Similarity=0.450 Sum_probs=133.6
Q ss_pred HHHHhcCCCCccceecccCceEEEEEEeC----CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeec
Q 047705 408 ELCRATDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN 481 (585)
Q Consensus 408 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 481 (585)
++....++|.+.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33445577999999999999999999753 3458999998754 23445778899999999999999999999877
Q ss_pred CC-----eEEEEEEccCCCCHHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC
Q 047705 482 EE-----FKGLVLEYMPQGSLEKHLYS-----TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM 551 (585)
Q Consensus 482 ~~-----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~ 551 (585)
.+ ..++||||+++++|.+++.. ....+++..++.++.|+++||.||| +++|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCC
Confidence 65 35999999999999999853 2246899999999999999999999 99999999999999999999
Q ss_pred cEEEeeecccccccCCCCccccccccccccccCC
Q 047705 552 IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 552 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.+||+|||+++...............+++.|+||
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 218 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCc
Confidence 9999999999876433322333445678899998
No 261
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.3e-27 Score=243.36 Aligned_cols=168 Identities=29% Similarity=0.445 Sum_probs=131.1
Q ss_pred CCCccceecccCceEEEEEEeC--CC--cEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeee-cCCeEEEE
Q 047705 415 GFSENNLIGRGGFGSVYKARLG--DG--MEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCS-NEEFKGLV 488 (585)
Q Consensus 415 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 488 (585)
.|++.+.||+|+||.||+|++. ++ ..||+|.++.. .....+.+.+|+.++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667889999999999999753 32 46899988643 2345678899999999999999999999865 45678999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||+++|+|.+++......+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877667889999999999999999999 8999999999999999999999999999998654322
Q ss_pred Cc--cccccccccccccCC
Q 047705 569 QS--MTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~--~~~~~~~gt~~y~aP 585 (585)
.. .......+|+.|+||
T Consensus 247 ~~~~~~~~~~~~~~~y~aP 265 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMAL 265 (373)
T ss_dssp -----------CCGGGSCH
T ss_pred cccccccCCCCCcccccCh
Confidence 11 122445678899998
No 262
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.94 E-value=1.1e-26 Score=238.20 Aligned_cols=168 Identities=27% Similarity=0.328 Sum_probs=142.9
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecC-----Ce
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EF 484 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 484 (585)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3468999999999999999999876 78899999987532 33457788999999999999999999998655 36
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.|+||||++ |+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999996 5999998765 5889999999999999999999 899999999999999999999999999999875
Q ss_pred cCCCCc-cccccccccccccCC
Q 047705 565 IGEDQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~-~~~~~~~gt~~y~aP 585 (585)
...... ......+||+.|+||
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aP 200 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAP 200 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCH
T ss_pred CCCCCccccccccccccCCCCC
Confidence 432211 112456899999998
No 263
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94 E-value=6.2e-27 Score=231.17 Aligned_cols=162 Identities=28% Similarity=0.504 Sum_probs=140.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeec-----------
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN----------- 481 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------- 481 (585)
++|++.+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 56899999999999999999986 78999999987543 356789999999999999999998854
Q ss_pred -----CCeEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEE
Q 047705 482 -----EEFKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYL 555 (585)
Q Consensus 482 -----~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl 555 (585)
....++||||+++++|.+++.... ..+++..++.++.|++.||.||| +++|+||||||+||++++++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEE
Confidence 345799999999999999997642 36889999999999999999999 899999999999999999999999
Q ss_pred eeecccccccCCCCccccccccccccccCC
Q 047705 556 SDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 556 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+|||+++...... ......||+.|+||
T Consensus 164 ~Dfg~~~~~~~~~---~~~~~~~~~~y~aP 190 (284)
T 2a19_B 164 GDFGLVTSLKNDG---KRTRSKGTLRYMSP 190 (284)
T ss_dssp CCCTTCEESSCCS---CCCCCCSCCTTSCH
T ss_pred Ccchhheeccccc---cccccCCcccccCh
Confidence 9999998764322 22345799999998
No 264
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=6.8e-27 Score=230.68 Aligned_cols=168 Identities=26% Similarity=0.428 Sum_probs=139.8
Q ss_pred cCCCCccceecccCceEEEEEEeCC----CcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|++.. +..||+|++... .....+.+.+|+++++.++||||+++++++..+ ..|+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4679999999999999999997532 346999998754 234567889999999999999999999998654 5689
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCC
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 567 (585)
||||+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999865432
Q ss_pred CCccccccccccccccCC
Q 047705 568 DQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~~~~~~~gt~~y~aP 585 (585)
. ........+|+.|+||
T Consensus 167 ~-~~~~~~~~~~~~y~aP 183 (281)
T 3cc6_A 167 D-YYKASVTRLPIKWMSP 183 (281)
T ss_dssp -------CCCCCGGGCCH
T ss_pred c-ccccccCCCCcceeCc
Confidence 2 1223345678899998
No 265
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=6.9e-26 Score=224.15 Aligned_cols=207 Identities=21% Similarity=0.160 Sum_probs=150.6
Q ss_pred ccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCC
Q 047705 80 LSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQK 159 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 159 (585)
+..+++++++++++|.++.+.+. ++..++.|+|++|.+++..+..|..+++|++|+|++|.|+++.+. ..+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~-----~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPD-----LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSC-----CCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCCC-----CCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 34445555555555555433221 122355555555555555556677778888888888888765443 67778
Q ss_pred CceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcc
Q 047705 160 LQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNF 239 (585)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l 239 (585)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+.. +..+++|+.|++++|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~---------------------~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA---------------------LRGLGELQELYLKGNEL 136 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSST---------------------TTTCTTCCEEECTTSCC
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHH---------------------HcCCCCCCEEECCCCCC
Confidence 888888888887 55667777888888888888887544443 44555667777788888
Q ss_pred cccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCC
Q 047705 240 SGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIP 316 (585)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 316 (585)
++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|++++|+|+ .+|..+..+++|+.++|++|+|.|.|.
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 8777778888999999999999999777777888999999999999998 567777888899999999999998875
No 266
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=8.5e-27 Score=235.32 Aligned_cols=166 Identities=30% Similarity=0.528 Sum_probs=138.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcE--EEEEEEech-hhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGME--VAVKVFNLQ-CRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 488 (585)
++|++.+.||+|+||.||+|++. ++.. ||+|.+... .....+.+.+|+++++++ +||||+++++++...+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57999999999999999999865 5664 489988753 233456788999999999 899999999999999999999
Q ss_pred EEccCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcE
Q 047705 489 LEYMPQGSLEKHLYSTN---------------CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIA 553 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~ 553 (585)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 36899999999999999999999 8999999999999999999999
Q ss_pred EEeeecccccccCCCCccccccccccccccCC
Q 047705 554 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 554 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+|||+++.... ........+|+.|+||
T Consensus 182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aP 210 (327)
T 1fvr_A 182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAI 210 (327)
T ss_dssp EECCTTCEESSCE---ECCC----CCTTTCCH
T ss_pred EEcccCcCccccc---cccccCCCCCccccCh
Confidence 9999999874321 1122334578889998
No 267
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.1e-26 Score=239.88 Aligned_cols=164 Identities=27% Similarity=0.410 Sum_probs=135.1
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeec--------
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN-------- 481 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 481 (585)
...++|++.+.||+|+||.||+|++. +++.||||++..... ...+|+++++.++||||++++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 45678999999999999999999865 789999999875432 23469999999999999999999843
Q ss_pred ------------------------------CCeEEEEEEccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHh
Q 047705 482 ------------------------------EEFKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLH 528 (585)
Q Consensus 482 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH 528 (585)
....++||||++ |+|.+.+.. ....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334889999997 587777653 3347899999999999999999999
Q ss_pred cCCCCCcEEcCCCCCCEEeC-CCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 529 FGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 529 ~~~~~~iiH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+++|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+||
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aP 210 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAP 210 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCH
Confidence 99999999999999997 68999999999998754322 23456789999998
No 268
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=1e-26 Score=231.59 Aligned_cols=167 Identities=29% Similarity=0.423 Sum_probs=141.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 368999999999999999999876 78999999986542 223467888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 490 EYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
||++ ++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 69999987654 36888999999999999999999 8999999999999999999999999999998753221
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
.......||+.|+||
T Consensus 158 --~~~~~~~~~~~y~aP 172 (299)
T 2r3i_A 158 --RTYTHEVVTLWYRAP 172 (299)
T ss_dssp --BCTTSCBCCCTTCCH
T ss_pred --cccCcccccccccCc
Confidence 122345789999998
No 269
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=3.6e-27 Score=232.33 Aligned_cols=168 Identities=26% Similarity=0.396 Sum_probs=141.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeee--cCCeEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFKGL 487 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 487 (585)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999876 78999999997542 344577889999999999999999999874 4568899
Q ss_pred EEEccCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----cEEcCCCCCCEEeCCCCcEEEeeec
Q 047705 488 VLEYMPQGSLEKHLYSTN---CILDIFQRLNIMIDVASALEYLHFGCSTP-----VIHCDLKPSNVLLDDNMIAYLSDFG 559 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-----iiH~dlkp~NIll~~~~~~kl~Dfg 559 (585)
||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 34899999999999999999999 777 9999999999999999999999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.++...... .......||+.|+||
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aP 185 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSP 185 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCH
T ss_pred hheeecccc--ccccccCCCccccCh
Confidence 998653221 122345789999998
No 270
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=1.4e-26 Score=237.82 Aligned_cols=163 Identities=26% Similarity=0.321 Sum_probs=131.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------ 483 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 483 (585)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 478999999999999999999875 6889999999753 2334567889999999999999999999987664
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999964 78888863 4788999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
... .......+||+.|+||
T Consensus 177 ~~~---~~~~~~~~gt~~y~aP 195 (371)
T 2xrw_A 177 AGT---SFMMTPYVVTRYYRAP 195 (371)
T ss_dssp ----------------CTTCCH
T ss_pred ccc---ccccCCceecCCccCH
Confidence 532 1223456799999998
No 271
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94 E-value=9e-27 Score=232.89 Aligned_cols=162 Identities=30% Similarity=0.442 Sum_probs=131.5
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEccC
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMP 493 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 493 (585)
++|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56889999999999999999874 788999998643 345778899999999999999999998874 4789999999
Q ss_pred CCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc-EEEeeecccccccCCCCc
Q 047705 494 QGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI-AYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 494 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~~~~ 570 (585)
+|+|.+++..... .+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999987643 4678889999999999999999222289999999999999988876 799999999764321
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.....||+.|+||
T Consensus 160 --~~~~~gt~~y~aP 172 (307)
T 2eva_A 160 --MTNNKGSAAWMAP 172 (307)
T ss_dssp -------CCTTSSCH
T ss_pred --cccCCCCCceECh
Confidence 2334699999998
No 272
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94 E-value=8.5e-27 Score=230.99 Aligned_cols=166 Identities=27% Similarity=0.305 Sum_probs=129.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467999999999999999999875 78999999987542 222334455556688889999999999999999999999
Q ss_pred EccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 490 EYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 490 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
||++ |++.+++.. ....+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 488777654 3447899999999999999999999 77 99999999999999999999999999998654
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......||+.|+||
T Consensus 162 ~~~---~~~~~~~t~~y~aP 178 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAP 178 (290)
T ss_dssp -----------CCCCCCSCH
T ss_pred ccc---cccccCCCccccCh
Confidence 321 22334799999998
No 273
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=1.4e-27 Score=238.07 Aligned_cols=166 Identities=29% Similarity=0.450 Sum_probs=127.8
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHh--cCCCcceeEEeeeecCC----eEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS--IRHRNLIKVISSCSNEE----FKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 487 (585)
++|++.+.||+|+||.||+|++. ++.||||++.... ...+..|.+++.. ++||||+++++++...+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57999999999999999999874 8899999986442 3456678888887 79999999999998776 7899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG-----CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
||||+++|+|.+++... .+++..+..++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||+|+
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999765 467778889999999999999932 15799999999999999999999999999998
Q ss_pred cccCCCCcc--ccccccccccccCC
Q 047705 563 LLIGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aP 585 (585)
......... ......||+.|+||
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aP 181 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCH
T ss_pred eccCCCcccccccCCCCcCccccCH
Confidence 654332221 12344799999998
No 274
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.94 E-value=8.8e-27 Score=236.55 Aligned_cols=167 Identities=29% Similarity=0.366 Sum_probs=139.7
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHHH-HHhcCCCcceeEEeeeecCCeEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECEI-MKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ......+..|..+ ++.++||||+++++++..++..|+|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 4468999999999999999999874 78999999987542 2233445555555 7778999999999999999999999
Q ss_pred EEccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 489 LEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
|||+++ +|.+++.. ....+++..++.++.||+.||+||| ++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888764 3457899999999999999999999 76 9999999999999999999999999999875
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.. ........||+.|+||
T Consensus 205 ~~---~~~~~~~~gt~~y~aP 222 (340)
T 3an0_A 205 VD---SVAKTIDAGCKPYMAP 222 (340)
T ss_dssp SC---HHHHHHSSCCCCCCCH
T ss_pred cc---ccccccCCCCccccCc
Confidence 32 1222345799999998
No 275
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=2.4e-26 Score=232.31 Aligned_cols=159 Identities=24% Similarity=0.380 Sum_probs=138.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeec--CCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSN--EEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 489 (585)
++|++.+.||+|+||.||+|++. +++.||+|+++... .+.+.+|+++++.++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 67999999999999999999864 78999999987442 366888999999997 9999999999987 56789999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC-cEEEeeecccccccCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM-IAYLSDFGIAKLLIGED 568 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~ 568 (585)
||+++++|.+++.. +++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+|+......
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999998853 788899999999999999999 89999999999999999666 89999999998654322
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 186 ---~~~~~~~~~~y~aP 199 (330)
T 3nsz_A 186 ---EYNVRVASRYFKGP 199 (330)
T ss_dssp ---CCCSCCSCGGGCCH
T ss_pred ---ccccccccccccCh
Confidence 22445789999998
No 276
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=1.9e-27 Score=245.01 Aligned_cols=163 Identities=18% Similarity=0.230 Sum_probs=132.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech---hhhhHHHHHHHH---HHHHhcCCCcceeEE-------ee
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CRRAFKSFDVEC---EIMKSIRHRNLIKVI-------SS 478 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 478 (585)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467899999999999999999864 7999999999743 334567888999 555566899999998 55
Q ss_pred eecCC-----------------eEEEEEEccCCCCHHHHhhcCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 047705 479 CSNEE-----------------FKGLVLEYMPQGSLEKHLYSTNC------ILDIFQRLNIMIDVASALEYLHFGCSTPV 535 (585)
Q Consensus 479 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 535 (585)
+..++ ..|+||||+ +|+|.+++..... .+++..+..++.||+.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6799999986431 2235778889999999999999 8999
Q ss_pred EEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 536 iH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+||||||+|||++.++.+||+|||+|+... ......+| +.|+||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aP 271 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPP 271 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccCh
Confidence 999999999999999999999999998532 12345567 999998
No 277
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=233.49 Aligned_cols=168 Identities=26% Similarity=0.294 Sum_probs=131.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeee--------cCC
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCS--------NEE 483 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~~ 483 (585)
.+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47999999999999999999875 78999999987666566678899999999996 999999999983 344
Q ss_pred eEEEEEEccCCCCHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--cEEcCCCCCCEEeCCCCcEEEeeec
Q 047705 484 FKGLVLEYMPQGSLEKHLYS--TNCILDIFQRLNIMIDVASALEYLHFGCSTP--VIHCDLKPSNVLLDDNMIAYLSDFG 559 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiH~dlkp~NIll~~~~~~kl~Dfg 559 (585)
..++||||+. |+|.+++.. ....+++..++.++.|++.||+||| ..+ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 6899999995 699998865 3346899999999999999999999 888 9999999999999999999999999
Q ss_pred ccccccCCCCcc----------ccccccccccccCC
Q 047705 560 IAKLLIGEDQSM----------TQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~----------~~~~~~gt~~y~aP 585 (585)
+++......... ......||+.|+||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219 (337)
T ss_dssp TCBCCSSCC---------------------------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCCh
Confidence 998764322110 11245699999998
No 278
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=1.4e-26 Score=233.78 Aligned_cols=171 Identities=20% Similarity=0.298 Sum_probs=141.7
Q ss_pred HHHhcCCCCcc-ceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCC
Q 047705 409 LCRATDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEE 483 (585)
Q Consensus 409 ~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 483 (585)
.....+.|.+. +.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.+. ||||+++++++...+
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 33445567776 89999999999999876 68999999987542 233567889999999995 699999999999999
Q ss_pred eEEEEEEccCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeec
Q 047705 484 FKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFG 559 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg 559 (585)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 999999999999999998654 246899999999999999999999 899999999999999987 7899999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+++..... .......||+.|+||
T Consensus 180 ~a~~~~~~---~~~~~~~gt~~y~aP 202 (327)
T 3lm5_A 180 MSRKIGHA---CELREIMGTPEYLAP 202 (327)
T ss_dssp GCEEC------------CCCGGGCCH
T ss_pred cccccCCc---cccccccCCcCccCC
Confidence 99875322 122446799999998
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.8e-25 Score=219.04 Aligned_cols=203 Identities=27% Similarity=0.328 Sum_probs=124.8
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+.+.+++++++++ .+|..+. ++|++|+|++|.|+ .++...+..+++|++|+|++|+++.++. ..|..+++|++|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~-~~~~~l~~L~~L 90 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPA-GIFKELKNLETL 90 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCT-TTTSSCTTCCEE
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeCh-hhhcCCCCCCEE
Confidence 35667777777776 4555443 46777777777776 3333334466777777777777777664 556677777777
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
+|++|+++++.+. .+..+++ |++|++++|.+++..+..|..+++|++|+|++|.+.++.+..|..+++|++|+|++|+
T Consensus 91 ~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 91 WVTDNKLQALPIG-VFDQLVN-LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp ECCSSCCCCCCTT-TTTTCSS-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCHh-HcccccC-CCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 7777777654443 4444544 6666666666666555556666666666666666665555556666666666666666
Q ss_pred CCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCccc
Q 047705 170 LEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFS 240 (585)
Q Consensus 170 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~ 240 (585)
|+++.+..|..+++|++|+|++|.+++..+.. +..+++|+.|++++|.+.
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 169 LKRVPEGAFDKLTELKTLKLDNNQLKRVPEGA---------------------FDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCSCCCTTT---------------------TTTCTTCCEEECCSSCBC
T ss_pred CcEeChhHhccCCCcCEEECCCCcCCcCCHHH---------------------hccccCCCEEEecCCCee
Confidence 66555555666666666666666665443333 444556666666777664
No 280
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.94 E-value=6.8e-27 Score=237.81 Aligned_cols=167 Identities=22% Similarity=0.255 Sum_probs=134.6
Q ss_pred CCCCccceecccCceEEEEEEeC----CCcEEEEEEEechhhh-----------hHHHHHHHHHHHHhcCCCcceeEEee
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCRR-----------AFKSFDVECEIMKSIRHRNLIKVISS 478 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 478 (585)
++|++.+.||+|+||.||+|++. ++..||+|+....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 67999999999999999999875 5678999998754211 12346678899999999999999999
Q ss_pred eec----CCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCC--c
Q 047705 479 CSN----EEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNM--I 552 (585)
Q Consensus 479 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~--~ 552 (585)
+.. .+..|+||||+ +++|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 887 67899999999 999999998765 7899999999999999999999 89999999999999998777 9
Q ss_pred EEEeeecccccccCCCCc-----cccccccccccccCC
Q 047705 553 AYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 553 ~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aP 585 (585)
+||+|||+|+.+...... .......||+.|+||
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 229 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL 229 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence 999999999876432211 112456799999998
No 281
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.94 E-value=4.7e-27 Score=252.64 Aligned_cols=169 Identities=26% Similarity=0.454 Sum_probs=143.8
Q ss_pred HhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 490 (585)
...++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.. +..|+|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456788999999999999999999888889999997543 234678999999999999999999999876 67899999
Q ss_pred ccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 491 YMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
|+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 999999999997532 35889999999999999999999 8999999999999999999999999999998653211
Q ss_pred ccccccccccccccCC
Q 047705 570 SMTQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~~~~~~~gt~~y~aP 585 (585)
........++..||||
T Consensus 418 ~~~~~~~~~~~~y~aP 433 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAP 433 (535)
T ss_dssp HHTTCSTTSCGGGSCH
T ss_pred eecccCCcCcccccCH
Confidence 1122344577889998
No 282
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=5.8e-27 Score=239.93 Aligned_cols=163 Identities=27% Similarity=0.362 Sum_probs=124.0
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC------
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE------ 482 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 482 (585)
..++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3478999999999999999999865 7899999998653 233456788999999999999999999998654
Q ss_pred CeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
...|+||||+ +++|.+++... .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+|+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5679999999 78999988763 5899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .....+||++|+||
T Consensus 181 ~~~~-----~~~~~~~t~~y~aP 198 (367)
T 2fst_X 181 HTAD-----EMTGYVATRWYRAP 198 (367)
T ss_dssp ---------------CCCTTCCH
T ss_pred cccc-----cCCCcCcCcCccCh
Confidence 6432 23456799999998
No 283
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=253.55 Aligned_cols=167 Identities=25% Similarity=0.405 Sum_probs=136.1
Q ss_pred CCCccc-eecccCceEEEEEEeC---CCcEEEEEEEechh-hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 415 GFSENN-LIGRGGFGSVYKARLG---DGMEVAVKVFNLQC-RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 415 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++.+.+ .||+|+||.||+|.++ ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999753 45679999987642 3356789999999999999999999999976 5689999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQ 569 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 569 (585)
||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999877667999999999999999999999 89999999999999999999999999999987643222
Q ss_pred cc-ccccccccccccCC
Q 047705 570 SM-TQTQTLATIGYMAP 585 (585)
Q Consensus 570 ~~-~~~~~~gt~~y~aP 585 (585)
.. ......+|+.||||
T Consensus 492 ~~~~~~~~~~~~~y~AP 508 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAP 508 (613)
T ss_dssp ----------CCTTSCH
T ss_pred eeeeccCCCCccceeCH
Confidence 11 12233467899998
No 284
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=231.01 Aligned_cols=167 Identities=26% Similarity=0.370 Sum_probs=135.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeee-----------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS----------- 480 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 480 (585)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367999999999999999999876 58999999998766666788899999999999999999999873
Q ss_pred ---cCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC-CCCcEEEe
Q 047705 481 ---NEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD-DNMIAYLS 556 (585)
Q Consensus 481 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~-~~~~~kl~ 556 (585)
..+..|+||||++ |+|.+++... .+++..++.++.|++.||+||| +++|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 5999998753 5889999999999999999999 89999999999999997 67799999
Q ss_pred eecccccccCCCC-ccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQ-SMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aP 585 (585)
|||+++....... ........||+.|+||
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 193 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCH
T ss_pred cCccccccCCCcccccccccccccccccCc
Confidence 9999986542211 1122345679999998
No 285
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=2.3e-26 Score=225.69 Aligned_cols=226 Identities=22% Similarity=0.281 Sum_probs=142.9
Q ss_pred CEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEcc
Q 047705 13 EELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLS 92 (585)
Q Consensus 13 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls 92 (585)
..+++.++.+... ..+..+++|++|++++|.++ .++... .+++|++|+|++|+++.++ .+..+++|++|+|+
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~l~--~l~~L~~L~l~~n~l~~~~---~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQGIQ--YLPNVRYLALGGNKLHDIS---ALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCTTGG--GCTTCCEEECTTSCCCCCG---GGTTCTTCCEEECT
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCcc-cccccc--cCCCCcEEECCCCCCCCch---hhcCCCCCCEEECC
Confidence 3445555554432 34556667777777777766 333332 4677777777777776653 46667777777777
Q ss_pred CCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCc
Q 047705 93 NNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG 172 (585)
Q Consensus 93 ~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 172 (585)
+|+++++.+. .++.++. |++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|++++
T Consensus 94 ~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 94 GNQLQSLPNG-VFDKLTN-LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp TSCCCCCCTT-TTTTCTT-CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCccCccChh-HhcCCcC-CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 7777655443 3444544 6666666666665555556666666666666666666555556666666666666666665
Q ss_pred cCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCC
Q 047705 173 SIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKN 252 (585)
Q Consensus 173 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 252 (585)
..+..|..+++|++|++++|.+++..+.. +..+++|+.|++++|.+.+ .+++
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~l~~N~~~~-------~~~~ 223 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGV---------------------FDRLTSLQYIWLHDNPWDC-------TCPG 223 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTT---------------------TTTCTTCCEEECCSSCBCC-------CTTT
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHH---------------------HhCCcCCCEEEccCCCccc-------cCcH
Confidence 55555666666666666666666544433 4455666667777776653 3567
Q ss_pred CcEEeecccCcccccCccccCcCC
Q 047705 253 LEYLFLGYNRLQGLIPDSFGNLIS 276 (585)
Q Consensus 253 L~~L~ls~N~l~~~~~~~~~~l~~ 276 (585)
|+.|+++.|.++|.+|.+++.+..
T Consensus 224 l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 224 IRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp THHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHHHHHHhCCCcccCcccccCC
Confidence 888888888888888888776654
No 286
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.93 E-value=6.9e-27 Score=234.43 Aligned_cols=176 Identities=22% Similarity=0.373 Sum_probs=141.8
Q ss_pred cCHHHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEech--hhhhHHHHHHHHHHHHhcC--CCcceeEEeee
Q 047705 404 FSYLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIR--HRNLIKVISSC 479 (585)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 479 (585)
+.+..+....++|++.+.||+|+||.||+|+..+++.||+|++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3344444555779999999999999999999888999999998754 2345678899999999997 59999999999
Q ss_pred ecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeec
Q 047705 480 SNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFG 559 (585)
Q Consensus 480 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 559 (585)
...+..++||| +.+++|.+++.... .+++..+..++.|+++||.||| +++|+||||||+||+++ ++.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeecc
Confidence 99999999999 55889999998764 6889999999999999999999 89999999999999996 4899999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+++...............||+.|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPP 197 (313)
T ss_dssp SSCC--------------CCGGGCCH
T ss_pred ccccccCccccccccCCCCCCCcCCH
Confidence 99876433322233456799999998
No 287
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.93 E-value=2.5e-26 Score=227.92 Aligned_cols=168 Identities=26% Similarity=0.381 Sum_probs=138.7
Q ss_pred cCCCCccc-eecccCceEEEEEEe--C-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 413 TDGFSENN-LIGRGGFGSVYKARL--G-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 413 ~~~~~~~~-~lg~G~~g~Vy~~~~--~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
.++|++.+ .||+|+||.||+|.+ . +++.||||+++... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45688887 999999999999954 2 46889999987542 23457789999999999999999999999 556789
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999998754 6889999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcc-ccccccccccccCC
Q 047705 567 EDQSM-TQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~-~~~~~~gt~~y~aP 585 (585)
..... ......||+.|+||
T Consensus 170 ~~~~~~~~~~~~~~~~y~aP 189 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAP 189 (291)
T ss_dssp TCSEEEC----CCCGGGCCH
T ss_pred CCCcccccccCCCCceeeCh
Confidence 32211 12334567889998
No 288
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.93 E-value=6.7e-26 Score=230.15 Aligned_cols=170 Identities=28% Similarity=0.436 Sum_probs=143.5
Q ss_pred HHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHh--cCCCcceeEEeeeecCC----
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKS--IRHRNLIKVISSCSNEE---- 483 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---- 483 (585)
....++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 44456899999999999999999988 58899999987542 3566778888887 78999999999998776
Q ss_pred eEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcEEcCCCCCCEEeCCCCcEEEeee
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG-----CSTPVIHCDLKPSNVLLDDNMIAYLSDF 558 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiH~dlkp~NIll~~~~~~kl~Df 558 (585)
..++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++++|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 789999999999999999875 588999999999999999999931 1468999999999999999999999999
Q ss_pred cccccccCCCCcc--ccccccccccccCC
Q 047705 559 GIAKLLIGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~--~~~~~~gt~~y~aP 585 (585)
|+++......... ......||+.|+||
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aP 220 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAP 220 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCH
T ss_pred CCceeccccccccccccccCCcCcccCCH
Confidence 9998764332211 23455799999998
No 289
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.93 E-value=4e-26 Score=226.76 Aligned_cols=168 Identities=26% Similarity=0.402 Sum_probs=137.8
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeee-ecCCeEEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKGLVL 489 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 489 (585)
..++|++.+.||+|+||.||+|++. +++.||||++..... ...+..|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 4478999999999999999999874 789999998765432 24678899999999988776666554 6677889999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeecccccccC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 566 (585)
||+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999876667999999999999999999999 8999999999999999 7889999999999987653
Q ss_pred CCCc-----cccccccccccccCC
Q 047705 567 EDQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~-----~~~~~~~gt~~y~aP 585 (585)
.... .......||+.|+||
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCH
T ss_pred cccCccCCCCcccccCCCccccch
Confidence 3221 122356799999998
No 290
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.93 E-value=4.4e-26 Score=232.62 Aligned_cols=167 Identities=26% Similarity=0.349 Sum_probs=140.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC-----CeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 485 (585)
.++|++.+.||+|+||.||+|++. +|+.||||++... .......+.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999876 6899999998643 233456788999999999999999999987654 678
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||++ ++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 5999998764 5899999999999999999999 8999999999999999999999999999998754
Q ss_pred CCCCcc--------ccccccccccccCC
Q 047705 566 GEDQSM--------TQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~--------~~~~~~gt~~y~aP 585 (585)
...... .....+||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAP 191 (353)
T ss_dssp ----------------CCCCCCGGGCCH
T ss_pred cccccccCccccccchhhccccccccCC
Confidence 221110 12345789999998
No 291
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93 E-value=1.5e-26 Score=229.40 Aligned_cols=168 Identities=28% Similarity=0.399 Sum_probs=133.1
Q ss_pred CCCCccceecccCceEEEEEEeC--CCc--EEEEEEEech---hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG--DGM--EVAVKVFNLQ---CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 486 (585)
++|++.+.||+|+||.||+|++. +++ .||+|+++.. .....+.+.+|++++++++||||+++++++..++ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57999999999999999999753 333 6899988754 2345578889999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccC
Q 047705 487 LVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIG 566 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 566 (585)
+||||+++++|.+++......+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876567899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcc-ccccccccccccCC
Q 047705 567 EDQSM-TQTQTLATIGYMAP 585 (585)
Q Consensus 567 ~~~~~-~~~~~~gt~~y~aP 585 (585)
..... ......+|+.|+||
T Consensus 174 ~~~~~~~~~~~~~~~~y~aP 193 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAP 193 (291)
T ss_dssp -CCEEEC-----CCGGGCCH
T ss_pred cccchhhhccCCCCceeeCc
Confidence 32211 22345678899998
No 292
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.93 E-value=9.2e-27 Score=237.58 Aligned_cols=163 Identities=15% Similarity=0.228 Sum_probs=137.3
Q ss_pred CCCCccceecccCceEEEEEEeCC---------CcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCccee----------
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIK---------- 474 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 474 (585)
++|++.+.||+|+||.||+|++.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 679999999999999999998763 789999998754 46778999999999999987
Q ss_pred -----EEeeeec-CCeEEEEEEccCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe
Q 047705 475 -----VISSCSN-EEFKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL 547 (585)
Q Consensus 475 -----l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll 547 (585)
+++++.. ++..|+||||+ +++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666665 67889999999 99999999875 247899999999999999999999 8999999999999999
Q ss_pred CCCC--cEEEeeecccccccCCCCc-----cccccccccccccCC
Q 047705 548 DDNM--IAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aP 585 (585)
+.++ .+||+|||+++.+...... .......||+.|+||
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 237 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM 237 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCH
Confidence 9988 9999999999876432211 112345799999998
No 293
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.93 E-value=1.3e-26 Score=238.25 Aligned_cols=164 Identities=12% Similarity=0.082 Sum_probs=121.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhc--CCCcceeEEe-------ee
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSI--RHRNLIKVIS-------SC 479 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~~-------~~ 479 (585)
...|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345899999999999999999976 78999999998643 23456777885555444 6999888663 33
Q ss_pred ecC-----------------CeEEEEEEccCCCCHHHHhhcCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCcE
Q 047705 480 SNE-----------------EFKGLVLEYMPQGSLEKHLYSTNCILDIFQR------LNIMIDVASALEYLHFGCSTPVI 536 (585)
Q Consensus 480 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~lH~~~~~~ii 536 (585)
..+ ...|+||||++ |+|.+++...+..+++..+ ..++.||+.||+||| +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 222 34799999998 8999999875434455555 677899999999999 89999
Q ss_pred EcCCCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 537 HCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 537 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||||||+|||++.++.+||+|||+|+.... ......||+.|+||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aP 260 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPR 260 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcCh
Confidence 999999999999999999999999986521 11245677999998
No 294
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=5.8e-26 Score=237.52 Aligned_cols=163 Identities=23% Similarity=0.301 Sum_probs=139.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhc------CCCcceeEEeeeecCCeE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSI------RHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 485 (585)
..+|++.+.||+|+||.||+|++. +++.||||+++... .....+..|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999876 68999999997542 3345677888888877 577999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc--EEEeeecccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI--AYLSDFGIAK 562 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~--~kl~Dfg~a~ 562 (585)
++||||+. ++|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 69999988764 35899999999999999999999 899999999999999998887 9999999997
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... .....+||+.||||
T Consensus 251 ~~~~-----~~~~~~gt~~y~aP 268 (429)
T 3kvw_A 251 YEHQ-----RVYTYIQSRFYRAP 268 (429)
T ss_dssp ETTC-----CCCSSCSCGGGCCH
T ss_pred ecCC-----cccccCCCCCccCh
Confidence 5421 22346799999998
No 295
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.9e-25 Score=220.95 Aligned_cols=201 Identities=28% Similarity=0.278 Sum_probs=150.6
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 191 (585)
++++++++|+++.. |..+. +++++|+|++|.+.+..+..|.++++|++|+|++|.|+++.+. ..+++|++|+|++
T Consensus 12 l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~ 86 (290)
T 1p9a_G 12 HLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSH 86 (290)
T ss_dssp CCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCS
T ss_pred ccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCC
Confidence 56666666666533 22222 4556666666666655555566666666666666666543222 4555566666666
Q ss_pred CcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccc
Q 047705 192 NKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271 (585)
Q Consensus 192 N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 271 (585)
|.++ .+|..+..+++|+.|++++|++++..+..|.++++|++|+|++|++++..+..|
T Consensus 87 N~l~----------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 144 (290)
T 1p9a_G 87 NQLQ----------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL 144 (290)
T ss_dssp SCCS----------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CcCC----------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhc
Confidence 6554 234456677888899999999998888999999999999999999998888889
Q ss_pred cCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCC
Q 047705 272 GNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 272 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.++..++.......++.+++.+|||.|++.
T Consensus 145 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 99999999999999999877778889999999999999999766655566678889999999999863
No 296
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.93 E-value=2.7e-26 Score=239.47 Aligned_cols=161 Identities=29% Similarity=0.481 Sum_probs=132.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC------CeEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE------EFKG 486 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 486 (585)
.+|++.+.||+|+||.||+|++. +++.||||++.... ....+|+++++.++||||++++++|... .+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35889999999999999999976 68999999986542 2234699999999999999999988432 2467
Q ss_pred EEEEccCCCCHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC-CcEEEeeecccc
Q 047705 487 LVLEYMPQGSLEKHLY---STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN-MIAYLSDFGIAK 562 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~-~~~kl~Dfg~a~ 562 (585)
+||||+++ ++.+.+. .....+++..+..++.||++||+||| +++|+||||||+|||++.+ +.+||+|||+|+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 6666554 23447899999999999999999999 9999999999999999954 678999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
...... .....+||++|+||
T Consensus 206 ~~~~~~---~~~~~~~t~~y~aP 225 (420)
T 1j1b_A 206 QLVRGE---PNVSYICSRYYRAP 225 (420)
T ss_dssp ECCTTC---CCCSCCSCTTSCCH
T ss_pred hcccCC---CceeeeeCCCcCCH
Confidence 754322 22456799999998
No 297
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=3.6e-26 Score=226.22 Aligned_cols=167 Identities=25% Similarity=0.408 Sum_probs=144.0
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999876 78999999997543 23457788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC---CcEEEeeeccccccc
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN---MIAYLSDFGIAKLLI 565 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~ 565 (585)
|||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999887654 6899999999999999999999 8999999999999999753 479999999998653
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......||+.|+||
T Consensus 176 ~~~---~~~~~~~~~~y~aP 192 (287)
T 2wei_A 176 QNT---KMKDRIGTAYYIAP 192 (287)
T ss_dssp CCS---SCSCHHHHHTTCCH
T ss_pred CCC---ccccccCcccccCh
Confidence 222 22344689999998
No 298
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.93 E-value=6.9e-26 Score=225.13 Aligned_cols=167 Identities=26% Similarity=0.413 Sum_probs=140.5
Q ss_pred cCCCCccceecccCceEEEEEEe-CCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeee-ecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... .+.+.+|+++++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999987 4789999999875432 24688899999999988766555544 66778899999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC---CCCcEEEeeecccccccCC
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD---DNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~ 567 (585)
|+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++ +++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999866667999999999999999999999 89999999999999994 8889999999999876533
Q ss_pred CCc-----cccccccccccccCC
Q 047705 568 DQS-----MTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~-----~~~~~~~gt~~y~aP 585 (585)
... .......||+.|+||
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCH
T ss_pred ccccccccccccccccccccCCh
Confidence 221 112456799999998
No 299
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.93 E-value=7.3e-26 Score=239.06 Aligned_cols=167 Identities=23% Similarity=0.346 Sum_probs=141.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCC-CcceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH-RNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 490 (585)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+..|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 468999999999999999999864 789999998875432 2467889999999987 566667777778889999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe---CCCCcEEEeeecccccccCC
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---DDNMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 567 (585)
|+ +++|.+++......+++..++.++.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 99999999876667999999999999999999999 8999999999999999 58899999999999876543
Q ss_pred CCcc-----ccccccccccccCC
Q 047705 568 DQSM-----TQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~~-----~~~~~~gt~~y~aP 585 (585)
.... ......||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aP 182 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASV 182 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred ccccccccccccccCCCccccCH
Confidence 2211 12366899999998
No 300
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.93 E-value=2.7e-26 Score=237.47 Aligned_cols=161 Identities=30% Similarity=0.482 Sum_probs=132.2
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC------eEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------FKGL 487 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 487 (585)
.+|++.+.||+|+||.||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46999999999999999999988777799998864422 2236999999999999999999985433 4789
Q ss_pred EEEccCCCCHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC-CCCcEEEeeeccccc
Q 047705 488 VLEYMPQGSLEKHLY---STNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFGIAKL 563 (585)
Q Consensus 488 v~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~-~~~~~kl~Dfg~a~~ 563 (585)
||||++++ +.+.+. .....+++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||+|+.
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 99999764 433332 22347899999999999999999999 89999999999999998 799999999999987
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..... .....+||++|+||
T Consensus 192 ~~~~~---~~~~~~~t~~y~aP 210 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAP 210 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCH
T ss_pred ccCCC---CCcccccCcCccCH
Confidence 64322 23456789999998
No 301
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.93 E-value=1.4e-26 Score=228.05 Aligned_cols=162 Identities=31% Similarity=0.454 Sum_probs=132.7
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecC-CeEEEEEEc
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNE-EFKGLVLEY 491 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 491 (585)
.++|++.+.||+|+||.||+|++ .++.||+|+++... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46799999999999999999987 47899999987543 456788999999999999999999987554 578999999
Q ss_pred cCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc
Q 047705 492 MPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS 570 (585)
Q Consensus 492 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 570 (585)
+++++|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 999999999976532 3788899999999999999999 899999999999999999999999999998864321
Q ss_pred cccccccccccccCC
Q 047705 571 MTQTQTLATIGYMAP 585 (585)
Q Consensus 571 ~~~~~~~gt~~y~aP 585 (585)
.....+++.|+||
T Consensus 171 --~~~~~~~~~y~aP 183 (278)
T 1byg_A 171 --QDTGKLPVKWTAP 183 (278)
T ss_dssp -------CCTTTSCH
T ss_pred --ccCCCccccccCH
Confidence 1234578899998
No 302
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.93 E-value=3.7e-26 Score=234.76 Aligned_cols=161 Identities=25% Similarity=0.350 Sum_probs=136.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE----
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK---- 485 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 485 (585)
.++|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999876 7899999999754 233457788999999999999999999999877654
Q ss_pred --EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 486 --GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 486 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
|+||||++ ++|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 688887743 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
... .....+||+.|+||
T Consensus 194 ~~~-----~~~~~~~t~~y~aP 210 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAP 210 (371)
T ss_dssp -----------CTTCCCTTSCH
T ss_pred ccc-----CcCCcccCccccCH
Confidence 432 23456789999998
No 303
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=7.5e-26 Score=222.03 Aligned_cols=228 Identities=18% Similarity=0.236 Sum_probs=167.3
Q ss_pred CCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccE
Q 047705 35 TLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLED 114 (585)
Q Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 114 (585)
++..+++.++.+..... ...+++|++|++++|.++.++ .+..+++|++|+|++|+++++ + .++.++. |++
T Consensus 20 ~l~~l~l~~~~~~~~~~---~~~l~~L~~L~l~~~~i~~~~---~l~~l~~L~~L~l~~n~l~~~-~--~l~~l~~-L~~ 89 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQ---GIQYLPNVRYLALGGNKLHDI-S--ALKELTN-LTY 89 (272)
T ss_dssp HHHHHHHTCSCTTSEEC---HHHHTTCCEEECTTSCCCCCT---TGGGCTTCCEEECTTSCCCCC-G--GGTTCTT-CCE
T ss_pred HHHHHHhcCcccccccc---cccccceeeeeeCCCCccccc---ccccCCCCcEEECCCCCCCCc-h--hhcCCCC-CCE
Confidence 45566777777663333 224788889999988888774 477788888899988888754 1 3455554 777
Q ss_pred EEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcc
Q 047705 115 FQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKL 194 (585)
Q Consensus 115 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 194 (585)
|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 77777776666666666667777777777776666666666666677777777766666565566666666666666666
Q ss_pred cccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCc
Q 047705 195 SRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNL 274 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 274 (585)
++..+. .+..+++|+.|++++|.+++..+..|..+++|+.|++++|++.+ .+
T Consensus 170 ~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~ 221 (272)
T 3rfs_A 170 QSLPEG---------------------VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TC 221 (272)
T ss_dssp CCCCTT---------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CT
T ss_pred CccCHH---------------------HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cC
Confidence 644333 24567778888889999999888889999999999999998874 35
Q ss_pred CCCCEEeCCCCccCccCChhhccCCc
Q 047705 275 ISLKFLNLSNNNLSGAIPASLEKLSY 300 (585)
Q Consensus 275 ~~L~~L~l~~N~l~~~~~~~~~~l~~ 300 (585)
++|+.|+++.|.++|.+|..++.++.
T Consensus 222 ~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 222 PGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cHHHHHHHHHHhCCCcccCcccccCC
Confidence 67999999999999999998887654
No 304
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.93 E-value=4.2e-26 Score=249.46 Aligned_cols=161 Identities=27% Similarity=0.395 Sum_probs=132.3
Q ss_pred ceecccCceEEEEEEeC---CCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEEEccCC
Q 047705 420 NLIGRGGFGSVYKARLG---DGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVLEYMPQ 494 (585)
Q Consensus 420 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 494 (585)
+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999643 46789999997643 2345789999999999999999999999965 457899999999
Q ss_pred CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCCCc-ccc
Q 047705 495 GSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQS-MTQ 573 (585)
Q Consensus 495 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 573 (585)
|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 6899999999999999999999 899999999999999999999999999999876433221 223
Q ss_pred ccccccccccCC
Q 047705 574 TQTLATIGYMAP 585 (585)
Q Consensus 574 ~~~~gt~~y~aP 585 (585)
....||+.|+||
T Consensus 530 ~~~~~t~~y~AP 541 (635)
T 4fl3_A 530 THGKWPVKWYAP 541 (635)
T ss_dssp -----CGGGSCH
T ss_pred cCCCCceeeeCh
Confidence 344678899998
No 305
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.93 E-value=4.6e-26 Score=236.25 Aligned_cols=163 Identities=25% Similarity=0.307 Sum_probs=137.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC--------CCcceeEEeeee---
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR--------HRNLIKVISSCS--- 480 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 480 (585)
.++|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999865 6889999999754 334567888999999985 788999999987
Q ss_pred -cCCeEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCC------
Q 047705 481 -NEEFKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNM------ 551 (585)
Q Consensus 481 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~------ 551 (585)
.....++||||+ ++++.+++.... ..+++..++.++.||+.||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 556889999999 556666665543 46899999999999999999999 87 999999999999999775
Q ss_pred -------------------------------------------cEEEeeecccccccCCCCccccccccccccccCC
Q 047705 552 -------------------------------------------IAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 552 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
.+||+|||.|+.... .....+||+.||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----~~~~~~gt~~y~aP 262 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----HFTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----CSCSCCSCGGGCCH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----cCccCCCCCcccCC
Confidence 799999999986532 12445799999998
No 306
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.8e-26 Score=254.06 Aligned_cols=159 Identities=23% Similarity=0.356 Sum_probs=136.4
Q ss_pred CCCCccceecccCceEEEEEEeC--CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe-----E
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF-----K 485 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 485 (585)
++|++.+.||+|+||.||+|++. +++.||||++... .......+..|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999999875 6899999988643 23445678899999999999999999999987654 7
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||++|++|.+++.. .+++..++.++.||+.||.||| +++|+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987755 5899999999999999999999 8999999999999999975 89999999998653
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
.. ....||+.||||
T Consensus 233 ~~------~~~~gt~~y~aP 246 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAP 246 (681)
T ss_dssp CC------SCCCCCTTTSCT
T ss_pred cC------CccCCCccccCH
Confidence 21 345799999999
No 307
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.93 E-value=8.3e-26 Score=227.87 Aligned_cols=168 Identities=30% Similarity=0.426 Sum_probs=140.0
Q ss_pred HhcCCCCccceecccCceEEEEEEe--CCCcEEEEEEEechhh--hhHHHHHHHHHHHHhc---CCCcceeEEeeee---
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCR--RAFKSFDVECEIMKSI---RHRNLIKVISSCS--- 480 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 480 (585)
...++|++.+.||+|+||.||+|++ .+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457899999999999999999987 3688999999875422 2234566788777766 8999999999987
Q ss_pred --cCCeEEEEEEccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEee
Q 047705 481 --NEEFKGLVLEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSD 557 (585)
Q Consensus 481 --~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~D 557 (585)
.....++||||++ |+|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999997 699999987543 5899999999999999999999 89999999999999999999999999
Q ss_pred ecccccccCCCCccccccccccccccCC
Q 047705 558 FGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 558 fg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
||+++.... ........||+.|+||
T Consensus 164 fg~~~~~~~---~~~~~~~~~~~~y~aP 188 (326)
T 1blx_A 164 FGLARIYSF---QMALTSVVVTLWYRAP 188 (326)
T ss_dssp CCSCCCCCG---GGGGCCCCCCCTTCCH
T ss_pred CcccccccC---CCCccccccccceeCH
Confidence 999986532 1223456789999998
No 308
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=5e-26 Score=249.78 Aligned_cols=170 Identities=25% Similarity=0.360 Sum_probs=140.3
Q ss_pred HhcCCCCccceecccCceEEEEEEeC----CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeE
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 485 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 485 (585)
...++|++.+.||+|+||.||+|.+. .+..||+|.++.. .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34467889999999999999999864 2457999988653 2334577899999999999999999999985 4568
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999999877667899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCC
Q 047705 566 GEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aP 585 (585)
... ........||+.||||
T Consensus 543 ~~~-~~~~~~~~~t~~y~aP 561 (656)
T 2j0j_A 543 DST-YYKASKGKLPIKWMAP 561 (656)
T ss_dssp C-----------CCGGGCCH
T ss_pred CCc-ceeccCCCCCcceeCH
Confidence 322 2222345678899998
No 309
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.93 E-value=5.3e-26 Score=228.73 Aligned_cols=167 Identities=25% Similarity=0.297 Sum_probs=143.4
Q ss_pred HhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh------hhHHHHHHHHHHHHhcC--CCcceeEEeeeec
Q 047705 411 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR------RAFKSFDVECEIMKSIR--HRNLIKVISSCSN 481 (585)
Q Consensus 411 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 481 (585)
...++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+..|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34578999999999999999999865 789999999976532 12345677999999996 5999999999999
Q ss_pred CCeEEEEEEccCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC-CCCcEEEeeec
Q 047705 482 EEFKGLVLEYMPQ-GSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD-DNMIAYLSDFG 559 (585)
Q Consensus 482 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~-~~~~~kl~Dfg 559 (585)
++..++||||+.+ ++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++ +++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 89999998754 6889999999999999999999 89999999999999998 78999999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+++..... ......||+.|+||
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aP 217 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPP 217 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCH
T ss_pred cccccccc----cccCCCCCccCCCh
Confidence 99875422 22345799999998
No 310
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=229.81 Aligned_cols=168 Identities=27% Similarity=0.336 Sum_probs=135.3
Q ss_pred HHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh------hhHHHHHHHHHHHHhc----CCCcceeEEee
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR------RAFKSFDVECEIMKSI----RHRNLIKVISS 478 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~~ 478 (585)
....++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+..|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 444578999999999999999999865 788999999865422 1234556799999998 89999999999
Q ss_pred eecCCeEEEEEEc-cCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC-CCCcEEEe
Q 047705 479 CSNEEFKGLVLEY-MPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD-DNMIAYLS 556 (585)
Q Consensus 479 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~-~~~~~kl~ 556 (585)
+...+..++|||| +++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 78999999998754 6899999999999999999999 89999999999999998 88999999
Q ss_pred eecccccccCCCCccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|||+++..... ......||+.|+||
T Consensus 183 dfg~~~~~~~~----~~~~~~~~~~y~aP 207 (312)
T 2iwi_A 183 DFGSGALLHDE----PYTDFDGTRVYSPP 207 (312)
T ss_dssp CCSSCEECCSS----CBCCCCSCTTTSCH
T ss_pred EcchhhhcccC----cccccCCcccccCc
Confidence 99999875432 22345799999998
No 311
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=4.3e-26 Score=237.14 Aligned_cols=165 Identities=24% Similarity=0.330 Sum_probs=123.1
Q ss_pred CCCc-cceecccCceEEEEEEeC---CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeee--cCCeEEEE
Q 047705 415 GFSE-NNLIGRGGFGSVYKARLG---DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFKGLV 488 (585)
Q Consensus 415 ~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv 488 (585)
.|++ .++||+|+||.||+|++. +++.||||++.... ....+.+|+++++.++||||+++++++. .....|+|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3555 458999999999999865 57889999986442 2346788999999999999999999994 46789999
Q ss_pred EEccCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe----CCCCcEEEe
Q 047705 489 LEYMPQGSLEKHLYST--------NCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL----DDNMIAYLS 556 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll----~~~~~~kl~ 556 (585)
|||++ ++|.+++... ...+++..++.++.||+.||+||| +++|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 5888877532 124889999999999999999999 8999999999999999 677899999
Q ss_pred eecccccccCCCC-ccccccccccccccCC
Q 047705 557 DFGIAKLLIGEDQ-SMTQTQTLATIGYMAP 585 (585)
Q Consensus 557 Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aP 585 (585)
|||+|+....... .......+||++|+||
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAP 204 (405)
T ss_dssp CTTCCC----------------CCCTTCCH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCc
Confidence 9999987643211 1223456899999998
No 312
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.93 E-value=1.5e-25 Score=229.27 Aligned_cols=173 Identities=24% Similarity=0.320 Sum_probs=130.3
Q ss_pred HHHHHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCC--
Q 047705 407 LELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-- 483 (585)
Q Consensus 407 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 483 (585)
.......++|++.+.||+|+||.||+|++. +++.||||++.... ........|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 456677889999999999999999999875 68999999886542 22345667888889999999999999986533
Q ss_pred -----eEEEEEEccCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC-CCcEE
Q 047705 484 -----FKGLVLEYMPQGSLEKHLYS---TNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD-NMIAY 554 (585)
Q Consensus 484 -----~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~-~~~~k 554 (585)
..++||||+++ ++.+.+.. ....+++..+..++.|++.|+.||| .++++|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 37899999976 55544432 3346888999999999999999999 34689999999999999996 89999
Q ss_pred EeeecccccccCCCCccccccccccccccCC
Q 047705 555 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 555 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|+|||+++...... ......||+.|+||
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 200 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAP 200 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCH
Confidence 99999998764322 22456789999998
No 313
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.93 E-value=1.6e-25 Score=226.86 Aligned_cols=163 Identities=21% Similarity=0.308 Sum_probs=140.1
Q ss_pred cCCCCccceecccCceEEEEEEe-C-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCC------cceeEEeeeecCCe
Q 047705 413 TDGFSENNLIGRGGFGSVYKARL-G-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR------NLIKVISSCSNEEF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 484 (585)
.++|++.+.||+|+||.||+|.+ . +++.||+|+++... ...+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 36899999999999999999986 3 68899999987542 3456788899999988765 49999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC--------------
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNC-ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD-------------- 549 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~-------------- 549 (585)
.++||||+ +++|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8899999987643 6789999999999999999999 899999999999999987
Q ss_pred -----CCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 550 -----NMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 550 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
++.+||+|||+++.... ......||+.|+||
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aP 203 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAP 203 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCH
T ss_pred cccccCCCceEeeCcccccCcc-----ccccccCCccccCh
Confidence 66899999999986422 12346799999998
No 314
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=7.7e-26 Score=230.83 Aligned_cols=161 Identities=25% Similarity=0.347 Sum_probs=135.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe-----
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF----- 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 484 (585)
.++|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999875 7899999998654 23345678899999999999999999999987653
Q ss_pred -EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 485 -KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 485 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
.|+||||++ ++|.+++.. .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 588887753 4889999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCCccccccccccccccCC
Q 047705 564 LIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aP 585 (585)
... ......||+.|+||
T Consensus 176 ~~~-----~~~~~~~t~~y~aP 192 (353)
T 3coi_A 176 ADA-----EMTGYVVTRWYRAP 192 (353)
T ss_dssp -------------CCSBCCSCH
T ss_pred CCC-----CccccccCcCcCCH
Confidence 432 12346789999998
No 315
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93 E-value=1.5e-25 Score=226.22 Aligned_cols=166 Identities=27% Similarity=0.358 Sum_probs=126.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh-hhhHHHHHHHHH-HHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-RRAFKSFDVECE-IMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|... +++.||||+++... ......+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 368999999999999999999875 78999999997542 233345555665 677789999999999999999999999
Q ss_pred EccCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 490 EYMPQGSLEKHLYS----TNCILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 490 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88777753 2346889999999999999999999 77 9999999999999999999999999999865
Q ss_pred cCCCCccccccccccccccCC
Q 047705 565 IGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aP 585 (585)
.... ......||+.|+||
T Consensus 177 ~~~~---~~~~~~gt~~y~aP 194 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAP 194 (327)
T ss_dssp ---------------------
T ss_pred cccc---ccccCCCCccccCc
Confidence 3221 22344799999998
No 316
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.92 E-value=2.6e-25 Score=225.22 Aligned_cols=162 Identities=23% Similarity=0.331 Sum_probs=121.0
Q ss_pred cCCCCccc-eecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcceeEEeeeec----CCeEE
Q 047705 413 TDGFSENN-LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKG 486 (585)
Q Consensus 413 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 486 (585)
.++|.+.+ .||+|+||.||+|++. +++.||||++..... ...+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45788854 6999999999999876 789999999875421 11223334567799999999999876 45689
Q ss_pred EEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeecccc
Q 047705 487 LVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIAK 562 (585)
Q Consensus 487 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~a~ 562 (585)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998764 36899999999999999999999 899999999999999975 4569999999998
Q ss_pred cccCCCCccccccccccccccCC
Q 047705 563 LLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..... ......||+.|+||
T Consensus 180 ~~~~~----~~~~~~~t~~y~aP 198 (336)
T 3fhr_A 180 ETTQN----ALQTPCYTPYYVAP 198 (336)
T ss_dssp EC---------------------
T ss_pred ecccc----ccccCCCCcCccCh
Confidence 65321 22345789999998
No 317
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.92 E-value=4.2e-25 Score=227.85 Aligned_cols=168 Identities=25% Similarity=0.326 Sum_probs=140.4
Q ss_pred HHhcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CC-----cceeEEeeeecC
Q 047705 410 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HR-----NLIKVISSCSNE 482 (585)
Q Consensus 410 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 482 (585)
....++|++.+.||+|+||.||+|++. +++.||||+++... .....+..|+.+++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 334578999999999999999999876 68899999997442 33466778999988885 44 499999999999
Q ss_pred CeEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC--CCCcEEEeeec
Q 047705 483 EFKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD--DNMIAYLSDFG 559 (585)
Q Consensus 483 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~--~~~~~kl~Dfg 559 (585)
+..++||||++ ++|.+++.... ..+++..+..++.|++.||.|||. ++.+|+||||||+|||++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999995 59999998764 368999999999999999999992 247899999999999994 57889999999
Q ss_pred ccccccCCCCccccccccccccccCC
Q 047705 560 IAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 560 ~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+|+.... .....+||+.|+||
T Consensus 207 ~a~~~~~-----~~~~~~~t~~y~aP 227 (382)
T 2vx3_A 207 SSCQLGQ-----RIYQYIQSRFYRSP 227 (382)
T ss_dssp TCEETTC-----CCCSSCSCGGGCCH
T ss_pred Cceeccc-----ccccccCCccccCh
Confidence 9987532 12346799999998
No 318
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=8e-26 Score=236.34 Aligned_cols=165 Identities=25% Similarity=0.422 Sum_probs=132.1
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEEEcc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
.+|+..+.||+|+||.||.....+++.||||++..... ..+.+|+++++.+ +||||+++++++...+..|+|||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45888999999999997655556889999999865432 3456799999999 7999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC-----CCcEEEeeecccccccCC
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD-----NMIAYLSDFGIAKLLIGE 567 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~~ 567 (585)
+ |+|.+++........+..+..++.||+.||+||| +++|+||||||+||+++. ...+||+|||+|+.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 5 5999999877655555567789999999999999 899999999999999953 336889999999876432
Q ss_pred CCc-cccccccccccccCC
Q 047705 568 DQS-MTQTQTLATIGYMAP 585 (585)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aP 585 (585)
... ......+||++||||
T Consensus 177 ~~~~~~~~~~~gt~~y~AP 195 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAP 195 (432)
T ss_dssp ---------CCSCTTSCCG
T ss_pred CcceeeccccCCCcCccCh
Confidence 211 223456799999998
No 319
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=1.5e-26 Score=232.59 Aligned_cols=173 Identities=23% Similarity=0.395 Sum_probs=141.0
Q ss_pred HHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechh--hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCe
Q 047705 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 484 (585)
Q Consensus 407 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 484 (585)
.+.....++|++.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3344456789999999999999999998754 59999986542 2234567789999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 485 KGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
.++||||+++++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++ ++.+||+|||+++..
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999999999887667899999999999999999999 89999999999999998 679999999998754
Q ss_pred cCCC---CccccccccccccccCC
Q 047705 565 IGED---QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 565 ~~~~---~~~~~~~~~gt~~y~aP 585 (585)
.... .........||+.|+||
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aP 203 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAP 203 (319)
T ss_dssp --------CCSCBCCSGGGGTSCH
T ss_pred ccccccccccccccCCCcccccCh
Confidence 3111 11122345689999998
No 320
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=223.71 Aligned_cols=166 Identities=25% Similarity=0.322 Sum_probs=125.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhh--hhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999876 789999999975422 22334455556788889999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
||+ ++.+..+.......+++..+..++.|+++||.||| ++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 56666666554557899999999999999999999 74 99999999999999999999999999997653221
Q ss_pred CccccccccccccccCC
Q 047705 569 QSMTQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~~~~~~~gt~~y~aP 585 (585)
......||+.|+||
T Consensus 180 ---~~~~~~~~~~y~aP 193 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAP 193 (318)
T ss_dssp ----------CCTTCCH
T ss_pred ---cccccCCCccccCh
Confidence 22345789999998
No 321
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=3.9e-25 Score=212.58 Aligned_cols=196 Identities=18% Similarity=0.185 Sum_probs=118.4
Q ss_pred CCCEEecCCCcCCCcCCccccCCCCCccEEEccCCC-CCCCccCccccCCCCCcEEEccC-CCCcccCCcchhhcccccc
Q 047705 35 TLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNN-FSELNFLSSLSNCKSLTVIGLSN-NPLDGILPKTSIGNLSHSL 112 (585)
Q Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~L 112 (585)
+|++|+|++|+|++ ++...+..+++|++|+|++|+ ++.++. ..|..+++|++|+|++ |+++++.+. .+.+++. |
T Consensus 32 ~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~-~~f~~l~~L~~L~l~~~n~l~~i~~~-~f~~l~~-L 107 (239)
T 2xwt_C 32 STQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLES-HSFYNLSKVTHIEIRNTRNLTYIDPD-ALKELPL-L 107 (239)
T ss_dssp TCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECT-TTEESCTTCCEEEEEEETTCCEECTT-SEECCTT-C
T ss_pred cccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCH-hHcCCCcCCcEEECCCCCCeeEcCHH-HhCCCCC-C
Confidence 56666666666663 333333456666666666664 666654 4566666666666665 666554443 4445554 6
Q ss_pred cEEEeecCcceecCCccccCCCCcc---EEEeeCC-ccccccchhhhCCCCCc-eEEccCCCCCccCcccccCCCCCcEE
Q 047705 113 EDFQMHNCNVTGDIPEEIGNLTNLI---TIDLGGN-KLNGSILITLSKLQKLQ-GLVLDDNKLEGSIPDDICRLVELYKL 187 (585)
Q Consensus 113 ~~L~l~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L 187 (585)
++|++++|.+++ +|. |..+++|+ +|++++| .+.++.+..|.++++|+ +|++++|+++.+.+..|.. ++|++|
T Consensus 108 ~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L 184 (239)
T 2xwt_C 108 KFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAV 184 (239)
T ss_dssp CEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEE
T ss_pred CEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEE
Confidence 666666666664 333 66666666 7777777 66666666666677777 7777777776444444444 667777
Q ss_pred EcCCCc-ccccCcccccCc-ccchhhcCCCCCCCCccCCCCCCCcEEEccCC
Q 047705 188 ELGGNK-LSRSIPACFNNL-IALRILSLGSNDPLPLEIGNLKVLVGIDFSMN 237 (585)
Q Consensus 188 ~L~~N~-l~~~~~~~~~~l-~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N 237 (585)
++++|+ +++..+..|..+ ++|+.|++++|.........+++|+.|+++++
T Consensus 185 ~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp ECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeeccCc
Confidence 777774 665555666666 67777777776622222225667777777655
No 322
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.92 E-value=6.2e-25 Score=224.07 Aligned_cols=163 Identities=22% Similarity=0.320 Sum_probs=138.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CC-cEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc------ceeEEeeeecCCe
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DG-MEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN------LIKVISSCSNEEF 484 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 484 (585)
.++|++.+.||+|+||.||+|.+. ++ +.||+|+++... ...+.+..|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 368999999999999999999875 44 689999987542 34567888999999997765 9999999999999
Q ss_pred EEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEe----------------
Q 047705 485 KGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLL---------------- 547 (585)
Q Consensus 485 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll---------------- 547 (585)
.++||||+ ++++.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 667777776554 46899999999999999999999 9999999999999999
Q ss_pred ---CCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 548 ---DDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 548 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+.++.+||+|||+++.... ......||+.|+||
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aP 208 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPP 208 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCH
T ss_pred ccccCCCcEEEeecCccccccc-----cccCCcCCCcccCC
Confidence 5678999999999986422 12346799999998
No 323
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.92 E-value=1.1e-25 Score=242.93 Aligned_cols=168 Identities=29% Similarity=0.422 Sum_probs=140.7
Q ss_pred hcCCCCccceecccCceEEEEEEeC-CCcEEEEEEEech-hhhhHHHHHHHHHHHHhcCCCcceeEEeeeec------CC
Q 047705 412 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ-CRRAFKSFDVECEIMKSIRHRNLIKVISSCSN------EE 483 (585)
Q Consensus 412 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 483 (585)
..++|++.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 3478999999999999999999875 6899999998754 33456778999999999999999999998765 66
Q ss_pred eEEEEEEccCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCc---EEEeee
Q 047705 484 FKGLVLEYMPQGSLEKHLYSTNC--ILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMI---AYLSDF 558 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Df 558 (585)
..|+||||++||+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 78999999999999999987542 5788899999999999999999 899999999999999986664 999999
Q ss_pred cccccccCCCCccccccccccccccCC
Q 047705 559 GIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 559 g~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
|.++...... ......||+.|+||
T Consensus 169 G~a~~~~~~~---~~~~~~gt~~Y~AP 192 (676)
T 3qa8_A 169 GYAKELDQGE---LCTEFVGTLQYLAP 192 (676)
T ss_dssp CCCCBTTSCC---CCCCCCSCCTTCSS
T ss_pred cccccccccc---ccccccCCcccCCh
Confidence 9998754322 22456799999998
No 324
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.92 E-value=3.8e-25 Score=231.84 Aligned_cols=164 Identities=27% Similarity=0.374 Sum_probs=126.6
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCcceeEEeeeecCCeEEEEEEccC
Q 047705 415 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKGLVLEYMP 493 (585)
Q Consensus 415 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 493 (585)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++..++..|+|||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 355578899999999987766689999999987543 34567899999886 89999999999999999999999995
Q ss_pred CCCHHHHhhcCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCC-------------CcEE
Q 047705 494 QGSLEKHLYSTNCI------LDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDN-------------MIAY 554 (585)
Q Consensus 494 ~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~-------------~~~k 554 (585)
|+|.+++...... .++..++.++.||+.||+||| +++|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999865421 123345679999999999999 8999999999999999653 4899
Q ss_pred EeeecccccccCCCCcc--ccccccccccccCC
Q 047705 555 LSDFGIAKLLIGEDQSM--TQTQTLATIGYMAP 585 (585)
Q Consensus 555 l~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aP 585 (585)
|+|||+|+......... .....+||+.||||
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aP 201 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCH
Confidence 99999998764332211 12356799999998
No 325
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.92 E-value=9.5e-25 Score=215.65 Aligned_cols=143 Identities=15% Similarity=0.047 Sum_probs=127.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEEE
Q 047705 414 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 489 (585)
++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999999976 58999999997542 234577889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
||++|++|.+++... ....++..++.|++.||+||| +++|+||||||+||+++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999999653 355578889999999999999 8999999999999999999999999887654
No 326
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.91 E-value=4.3e-25 Score=227.05 Aligned_cols=163 Identities=20% Similarity=0.305 Sum_probs=138.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-----------CCcceeEEeeee
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-----------HRNLIKVISSCS 480 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 480 (585)
.++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 367999999999999999999875 78999999987542 34467788999998886 899999999987
Q ss_pred cCC----eEEEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CcEEcCCCCCCEEeC------
Q 047705 481 NEE----FKGLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCST-PVIHCDLKPSNVLLD------ 548 (585)
Q Consensus 481 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~iiH~dlkp~NIll~------ 548 (585)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999998743 35899999999999999999999 87 999999999999994
Q ss_pred CCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 549 DNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 549 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
..+.+||+|||+|+.... ......||+.|+||
T Consensus 173 ~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aP 204 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDE-----HYTNSIQTREYRSP 204 (373)
T ss_dssp TEEEEEECCCTTCEETTB-----CCCSCCSCGGGCCH
T ss_pred CcceEEEcccccccccCC-----CCCCCCCCccccCc
Confidence 445899999999986532 12345799999998
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.1e-24 Score=207.42 Aligned_cols=196 Identities=18% Similarity=0.215 Sum_probs=106.4
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCc-ceecCCccccCCCCccEEEeeC-CccccccchhhhCCCCCce
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCN-VTGDIPEEIGNLTNLITIDLGG-NKLNGSILITLSKLQKLQG 162 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~ 162 (585)
+|++|+|++|+++++.+. .+++++. |++|++++|. ++...+..|.++++|++|++++ |+++++.+..|.++++|++
T Consensus 32 ~l~~L~l~~n~l~~i~~~-~~~~l~~-L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSH-AFSNLPN-ISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TCCEEEEESCCCSEECTT-TTTTCTT-CCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred cccEEEEeCCcceEECHH-HccCCCC-CcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 555666666655544433 3334443 5555555553 4444444455555555555554 4554444444445555555
Q ss_pred EEccCCCCCccCcccccCCCCCc---EEEcCCC-cccccCcccccCcccchhhcCCCCCCCCccCCCCCCCc-EEEccCC
Q 047705 163 LVLDDNKLEGSIPDDICRLVELY---KLELGGN-KLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLV-GIDFSMN 237 (585)
Q Consensus 163 L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~-~L~ls~N 237 (585)
|++++|++++ +|. |..+++|+ +|++++| .+++..+. .+..+++|+ .|++++|
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~---------------------~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVN---------------------AFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTT---------------------TTTTTBSSEEEEECCSC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcc---------------------cccchhcceeEEEcCCC
Confidence 5555555543 232 44444444 4555544 44433322 244455566 6666666
Q ss_pred cccccCCcccCCCCCCcEEeecccC-cccccCccccCc-CCCCEEeCCCCccCccCChhhccCCccceEEeecC
Q 047705 238 NFSGIIPKEIGGLKNLEYLFLGYNR-LQGLIPDSFGNL-ISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFN 309 (585)
Q Consensus 238 ~l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 309 (585)
.++.+.+..|.. ++|+.|++++|+ ++++.+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 666544444554 677777777774 776666667777 7777777777777744332 4556667776655
No 328
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=2.3e-24 Score=219.44 Aligned_cols=242 Identities=21% Similarity=0.186 Sum_probs=174.8
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQ 116 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 116 (585)
++++-++++++..+..+ .+++++|+|++|+|+.+|. ++|..+++|++|+|++|++.+.++..++.+++..++.+.
T Consensus 12 ~~v~C~~~~Lt~iP~~l----~~~l~~L~Ls~N~i~~i~~-~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL----PRNAIELRFVLTKLRVIQK-GAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSCCTTC----CTTCSEEEEESCCCSEECT-TSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCccCcCc----CCCCCEEEccCCcCCCcCH-HHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 56788888888444333 3689999999999999986 789999999999999999877666656777777455677
Q ss_pred eecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC-CCCCccCcccccCCC-CCcEEEcCCCcc
Q 047705 117 MHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD-NKLEGSIPDDICRLV-ELYKLELGGNKL 194 (585)
Q Consensus 117 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l 194 (585)
+.+|+++...|..|..+++|++|++++|++....+..+....++..|++.+ |+++.+.+..|..+. .++.|+|++|+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 788889888888899999999999999999888777787888888888865 678766677777764 588889999998
Q ss_pred cccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEcc-CCcccccCCcccCCCCCCcEEeecccCcccccCccccC
Q 047705 195 SRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFS-MNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGN 273 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls-~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 273 (585)
+...+..| ...+|+ .|+++ +|.++.+.+..|.++++|+.|+|++|+|+.+.+..|.+
T Consensus 167 ~~i~~~~f-~~~~L~---------------------~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 167 QEIHNSAF-NGTQLD---------------------ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp CEECTTSS-TTEEEE---------------------EEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred cCCChhhc-cccchh---------------------HHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 85444433 233444 44554 35566555566777777777777777777554444443
Q ss_pred cCCCCEEeCCCC-ccCccCChhhccCCccceEEeecCc
Q 047705 274 LISLKFLNLSNN-NLSGAIPASLEKLSYLEDLNLSFNK 310 (585)
Q Consensus 274 l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~l~l~~N~ 310 (585)
|+.|.+.++ +++ .+| .+..+++|+.++++++.
T Consensus 225 ---L~~L~~l~~~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 225 ---LKKLRARSTYNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp ---CCEEECTTCTTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred ---chHhhhccCCCcC-cCC-CchhCcChhhCcCCCCc
Confidence 444444333 344 445 46677778888876544
No 329
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=8.6e-26 Score=231.17 Aligned_cols=264 Identities=17% Similarity=0.211 Sum_probs=162.4
Q ss_pred EEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCc---cccCCCC-CccEEEccCCCCCCCccCccccCC-----C
Q 047705 14 ELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSS---ITDVRLP-NLEELVLWGNNFSELNFLSSLSNC-----K 84 (585)
Q Consensus 14 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l-----~ 84 (585)
.++|+.|.+++..|..+...++|++|+|++|.|++.... ..+..++ +|++|+|++|+|+.... ..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~-~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNS-DELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCH-HHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHH-HHHHHHHhccCC
Confidence 467888888877777777777788888888888743321 2334566 78888888888887653 445543 8
Q ss_pred CCcEEEccCCCCcccCCcch---hhcccccccEEEeecCcceecCCccc----cC-CCCccEEEeeCCccccccc----h
Q 047705 85 SLTVIGLSNNPLDGILPKTS---IGNLSHSLEDFQMHNCNVTGDIPEEI----GN-LTNLITIDLGGNKLNGSIL----I 152 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~---~~~~~~~L~~L~l~~n~l~~~~~~~~----~~-l~~L~~L~L~~N~l~~~~~----~ 152 (585)
+|++|+|++|++++..+... +...+.+|++|+|++|.+++..+..+ .. .++|++|+|++|.+++... .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 88888888888876554421 22221347777777777765555433 23 2477777777777764332 3
Q ss_pred hhhCCC-CCceEEccCCCCCccCccccc----CC-CCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCC-
Q 047705 153 TLSKLQ-KLQGLVLDDNKLEGSIPDDIC----RL-VELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGN- 225 (585)
Q Consensus 153 ~~~~l~-~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~- 225 (585)
.+..++ +|++|+|++|+|++..+..+. .. ++|++|+|++|.++......+ +..+..
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l-----------------~~~l~~~ 223 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAEL-----------------AYIFSSI 223 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH-----------------HHHHHHS
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHH-----------------HHHHhcC
Confidence 334444 677777777777665554333 23 467777777777664211111 111222
Q ss_pred CCCCcEEEccCCcccccCC----cccCCCCCCcEEeecccCcccc-------cCccccCcCCCCEEeCCCCccCccCChh
Q 047705 226 LKVLVGIDFSMNNFSGIIP----KEIGGLKNLEYLFLGYNRLQGL-------IPDSFGNLISLKFLNLSNNNLSGAIPAS 294 (585)
Q Consensus 226 l~~L~~L~ls~N~l~~~~~----~~~~~l~~L~~L~ls~N~l~~~-------~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 294 (585)
.++|+.|++++|.+++..+ ..+..+++|+.|+|++|.+.++ ++..+..+++|+.||+++|++....+..
T Consensus 224 ~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 224 PNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred CCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 2366677777777765433 3345667788888888774332 2335666777778888888877654433
Q ss_pred h
Q 047705 295 L 295 (585)
Q Consensus 295 ~ 295 (585)
+
T Consensus 304 ~ 304 (362)
T 3goz_A 304 I 304 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=4.3e-24 Score=213.72 Aligned_cols=225 Identities=17% Similarity=0.186 Sum_probs=176.4
Q ss_pred CCCCcEEEccCCCCcccCCcc--hhhcccccccEEEeecCcceecCCccc--cCCCCccEEEeeCCccccccc----hhh
Q 047705 83 CKSLTVIGLSNNPLDGILPKT--SIGNLSHSLEDFQMHNCNVTGDIPEEI--GNLTNLITIDLGGNKLNGSIL----ITL 154 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~--~~~~~~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~ 154 (585)
...++.|.++++.+....-.. ....+++ |++|++++|.+++..|..+ ..+++|++|+|++|.+.+..+ ..+
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~ 141 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSR-LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQ 141 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSC-CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCc-eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHh
Confidence 345778888887775321100 0112333 8899999999888888887 889999999999999987443 455
Q ss_pred hCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccccc---C-cccccCcccchhhcCCCCCCC--Cc----cCC
Q 047705 155 SKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRS---I-PACFNNLIALRILSLGSNDPL--PL----EIG 224 (585)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~l~~n~~~--~~----~~~ 224 (585)
..+++|++|+|++|++++..+..|..+++|++|+|++|++.+. . +..+..+++|++|+|++|... +. .+.
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 221 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAA 221 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHH
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHh
Confidence 6789999999999999988888999999999999999998652 2 233478899999999999843 22 146
Q ss_pred CCCCCcEEEccCCcccccCCcccCCC---CCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCcc
Q 047705 225 NLKVLVGIDFSMNNFSGIIPKEIGGL---KNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYL 301 (585)
Q Consensus 225 ~l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 301 (585)
.+++|+.|++++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 77999999999999998878777776 69999999999999 4566664 7999999999999965 33 6788999
Q ss_pred ceEEeecCcCee
Q 047705 302 EDLNLSFNKLEG 313 (585)
Q Consensus 302 ~~l~l~~N~l~~ 313 (585)
+.|++++|+|+.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999863
No 331
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=4.1e-24 Score=217.58 Aligned_cols=200 Identities=19% Similarity=0.132 Sum_probs=86.5
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccE-EEccCCCCCCCccCccccCCCCCcE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEE-LVLWGNNFSELNFLSSLSNCKSLTV 88 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~~l~~L~~ 88 (585)
+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.++...|..+++|++ +.+++|+++.++. ..|..+++|++
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~-~~f~~l~~L~~ 108 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINP-EAFQNLPNLQY 108 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECT-TSBCCCTTCCE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCc-hhhhhcccccc
Confidence 344555555555543333445555555555555555443444444444444433 3334445554443 44455555555
Q ss_pred EEccCCCCcccCCcchhhcccccccEEEeec-CcceecCCccccCCC-CccEEEeeCCccccccchhhhCCCCCceEEcc
Q 047705 89 IGLSNNPLDGILPKTSIGNLSHSLEDFQMHN-CNVTGDIPEEIGNLT-NLITIDLGGNKLNGSILITLSKLQKLQGLVLD 166 (585)
Q Consensus 89 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 166 (585)
|++++|+++.+.+..+ ..... +..|++.+ +++....+..|..+. .++.|+|++|+|+.+.+.+|. ..+|++|+++
T Consensus 109 L~l~~n~l~~~~~~~~-~~~~~-l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~ 185 (350)
T 4ay9_X 109 LLISNTGIKHLPDVHK-IHSLQ-KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN-GTQLDELNLS 185 (350)
T ss_dssp EEEEEECCSSCCCCTT-CCBSS-CEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSST-TEEEEEEECT
T ss_pred ccccccccccCCchhh-cccch-hhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhcc-ccchhHHhhc
Confidence 5555555543333211 11111 44444433 334433334444432 344445555544433333332 2344444443
Q ss_pred C-CCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcC
Q 047705 167 D-NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSL 213 (585)
Q Consensus 167 ~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 213 (585)
+ |.++.+.++.|..+++|++|+|++|+|+..++..|.++++|+.+++
T Consensus 186 ~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 186 DNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred cCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC
Confidence 2 3444333334444444555555555444333333444444443333
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=4.4e-25 Score=236.57 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=118.2
Q ss_pred CccceecccCceEEEEEEeCCCcEEEEEEEechh--------hhhHHHHHHHHHHHHhcCCCcceeEEeeeecCCeEEEE
Q 047705 417 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--------RRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKGLV 488 (585)
Q Consensus 417 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 488 (585)
...+.||+|+||.||+|+. .++.+|+|+..... ....+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 57888998764321 11245688999999999999999655555566777999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccccccCCC
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGED 568 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 568 (585)
|||++|++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999876 4579999999999999 899999999999999998 99999999999764321
Q ss_pred Ccc-----ccccccccccccCC
Q 047705 569 QSM-----TQTQTLATIGYMAP 585 (585)
Q Consensus 569 ~~~-----~~~~~~gt~~y~aP 585 (585)
... .....+||++||||
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~AP 505 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFD 505 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHH
T ss_pred ccccchhhhhhhhcCCCCcCCH
Confidence 111 12467899999998
No 333
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.91 E-value=4.3e-24 Score=212.60 Aligned_cols=145 Identities=24% Similarity=0.361 Sum_probs=127.1
Q ss_pred cCCCCcc-ceecccCceEEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHH-HhcCCCcceeEEeeeec----CCeE
Q 047705 413 TDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIM-KSIRHRNLIKVISSCSN----EEFK 485 (585)
Q Consensus 413 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 485 (585)
.++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. .+..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4567776 78999999999999875 7899999998643 3456788887 55699999999999876 6778
Q ss_pred EEEEEccCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC---CCcEEEeeeccc
Q 047705 486 GLVLEYMPQGSLEKHLYSTN-CILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD---NMIAYLSDFGIA 561 (585)
Q Consensus 486 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~a 561 (585)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 36899999999999999999999 899999999999999997 789999999999
Q ss_pred cccc
Q 047705 562 KLLI 565 (585)
Q Consensus 562 ~~~~ 565 (585)
....
T Consensus 168 ~~~~ 171 (299)
T 3m2w_A 168 KETT 171 (299)
T ss_dssp EECT
T ss_pred cccc
Confidence 8754
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.8e-25 Score=226.38 Aligned_cols=254 Identities=15% Similarity=0.173 Sum_probs=153.9
Q ss_pred CCCEEecCCCcccccCCccccCC--CCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcE
Q 047705 11 NLEELDLRQNKLIGTVPVAIFNV--STLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTV 88 (585)
Q Consensus 11 ~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 88 (585)
.++++|+++|.+. +..+..+ +++++|++++|.+.+.++... .+++|++|+|++|.++.......+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~--~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHF--SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCC--CCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhc--cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 4778888888765 5566666 788888888888876655543 57888888888888765312145777788888
Q ss_pred EEccCCCCcccCCcchhhcccccccEEEeecC-cceec-CCccccCCCCccEEEeeCC-ccccc-cchhhhCCC-CCceE
Q 047705 89 IGLSNNPLDGILPKTSIGNLSHSLEDFQMHNC-NVTGD-IPEEIGNLTNLITIDLGGN-KLNGS-ILITLSKLQ-KLQGL 163 (585)
Q Consensus 89 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L 163 (585)
|+|++|.+++..+. .++.+++ |++|++++| .+++. ++..+..+++|++|++++| .+++. .+..+..++ +|++|
T Consensus 123 L~L~~~~l~~~~~~-~l~~~~~-L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L 200 (336)
T 2ast_B 123 LSLEGLRLSDPIVN-TLAKNSN-LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL 200 (336)
T ss_dssp EECTTCBCCHHHHH-HHTTCTT-CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEE
T ss_pred EeCcCcccCHHHHH-HHhcCCC-CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEE
Confidence 88888877654444 3444544 777777766 45542 4445666666777777666 66643 345566666 67777
Q ss_pred EccCC--CCC-ccCcccccCCCCCcEEEcCCCc-ccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCc-
Q 047705 164 VLDDN--KLE-GSIPDDICRLVELYKLELGGNK-LSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNN- 238 (585)
Q Consensus 164 ~L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~- 238 (585)
++++| .++ +.++..+..+++|++|++++|. +++..+..+..++ +|+.|++++|.
T Consensus 201 ~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~---------------------~L~~L~l~~~~~ 259 (336)
T 2ast_B 201 NLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN---------------------YLQHLSLSRCYD 259 (336)
T ss_dssp ECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT---------------------TCCEEECTTCTT
T ss_pred EeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC---------------------CCCEeeCCCCCC
Confidence 77666 343 2344555566666666666666 5444444444444 45555555553
Q ss_pred ccccCCcccCCCCCCcEEeecccCcccccCccccCc-CCCCEEeCCCCccCccCChhhc
Q 047705 239 FSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNL-ISLKFLNLSNNNLSGAIPASLE 296 (585)
Q Consensus 239 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~ 296 (585)
+.......+..+++|+.|++++| ++ ...+..+ ..++.|++++|++++..|..+.
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 22111124555666666666666 22 1233333 2355666677777766665544
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2e-23 Score=202.16 Aligned_cols=160 Identities=26% Similarity=0.294 Sum_probs=85.6
Q ss_pred CCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcC
Q 047705 134 TNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSL 213 (585)
Q Consensus 134 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 213 (585)
++|+.|+|++|.+.+..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+++..+..|.
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---------- 104 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFD---------- 104 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT----------
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhc----------
Confidence 3455555555555555555555555555555555555554444455555555555555555533333222
Q ss_pred CCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCCh
Q 047705 214 GSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPA 293 (585)
Q Consensus 214 ~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 293 (585)
.+++|+.|++++|.+++..+..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|++++..+.
T Consensus 105 -----------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 105 -----------HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp -----------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred -----------ccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 233344444444555544444455555666666666666555454555566666666666666655555
Q ss_pred hhccCCccceEEeecCcCeee
Q 047705 294 SLEKLSYLEDLNLSFNKLEGE 314 (585)
Q Consensus 294 ~~~~l~~L~~l~l~~N~l~~~ 314 (585)
.+..+++|+.|++++|+|.|.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTT
T ss_pred HHhCCCCCCEEEeeCCceeCC
Confidence 555566666666666666554
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=5.4e-26 Score=234.92 Aligned_cols=244 Identities=19% Similarity=0.222 Sum_probs=131.8
Q ss_pred cCCccccCCCCCCEEecCCCcCCCcCCcc---ccCCCCCccEEEccCCCCCCCccC--c-------cccCCCCCcEEEcc
Q 047705 25 TVPVAIFNVSTLKLLGLQDNSLSGSLSSI---TDVRLPNLEELVLWGNNFSELNFL--S-------SLSNCKSLTVIGLS 92 (585)
Q Consensus 25 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~--~-------~~~~l~~L~~L~Ls 92 (585)
.++..+..+++|++|+|++|.|+...+.. .+..+++|++|+|++|.+..+... . .|..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 34555666666666666666665321110 123466666666666655543210 1 13566777777777
Q ss_pred CCCCccc----CCcchhhcccccccEEEeecCcceecCCccc----cCC---------CCccEEEeeCCccc-cccc---
Q 047705 93 NNPLDGI----LPKTSIGNLSHSLEDFQMHNCNVTGDIPEEI----GNL---------TNLITIDLGGNKLN-GSIL--- 151 (585)
Q Consensus 93 ~N~l~~~----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~----~~l---------~~L~~L~L~~N~l~-~~~~--- 151 (585)
+|+++.. .+. .+..+++ |++|+|++|.++...+..+ ..+ ++|++|+|++|++. ...+
T Consensus 103 ~n~l~~~~~~~l~~-~l~~~~~-L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 180 (386)
T 2ca6_A 103 DNAFGPTAQEPLID-FLSKHTP-LEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180 (386)
T ss_dssp SCCCCTTTHHHHHH-HHHHCTT-CCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH
T ss_pred CCcCCHHHHHHHHH-HHHhCCC-CCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH
Confidence 7776542 111 2233332 4444444444432222222 222 56666666666665 2222
Q ss_pred hhhhCCCCCceEEccCCCCCc-----cCcccccCCCCCcEEEcCCCccc----ccCcccccCcccchhhcCCCCCCCCcc
Q 047705 152 ITLSKLQKLQGLVLDDNKLEG-----SIPDDICRLVELYKLELGGNKLS----RSIPACFNNLIALRILSLGSNDPLPLE 222 (585)
Q Consensus 152 ~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~l~~n~~~~~~ 222 (585)
..|..+++|++|+|++|+|+. ..+..+..+++|++|+|++|.++ ..+|. .
T Consensus 181 ~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~---------------------~ 239 (386)
T 2ca6_A 181 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI---------------------A 239 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH---------------------H
T ss_pred HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH---------------------H
Confidence 345556666666666666652 22335555666666666666664 22222 2
Q ss_pred CCCCCCCcEEEccCCccccc----CCccc--CCCCCCcEEeecccCccc----ccCccc-cCcCCCCEEeCCCCccCccC
Q 047705 223 IGNLKVLVGIDFSMNNFSGI----IPKEI--GGLKNLEYLFLGYNRLQG----LIPDSF-GNLISLKFLNLSNNNLSGAI 291 (585)
Q Consensus 223 ~~~l~~L~~L~ls~N~l~~~----~~~~~--~~l~~L~~L~ls~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~ 291 (585)
+..+++|+.|+|++|.+++. ++..+ +.+++|+.|+|++|++++ .+|..+ ..+++|+.|++++|++++..
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 33445566666666666654 33444 336777777777777776 355555 45677777777777777655
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=4.5e-26 Score=235.54 Aligned_cols=240 Identities=23% Similarity=0.252 Sum_probs=162.7
Q ss_pred CCCCccEEEccCCCCCCCcc---CccccCCCCCcEEEccCCCCcc---cCCcchhhcccccccEEEeecCcceecCCccc
Q 047705 57 RLPNLEELVLWGNNFSELNF---LSSLSNCKSLTVIGLSNNPLDG---ILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEI 130 (585)
Q Consensus 57 ~l~~L~~L~L~~n~l~~~~~---~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 130 (585)
.+++|++|+|++|.++.... ...|..+++|++|+|++|.+.. ..|. .+. .+...|
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~-~~~------------------~l~~~l 90 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPE-ALR------------------LLLQAL 90 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHH-HHH------------------HHHHHH
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhH-HHH------------------HHHHHH
Confidence 56788888888888877532 0236678888888888865542 2222 111 111234
Q ss_pred cCCCCccEEEeeCCcccc----ccchhhhCCCCCceEEccCCCCCccCcccccC----C---------CCCcEEEcCCCc
Q 047705 131 GNLTNLITIDLGGNKLNG----SILITLSKLQKLQGLVLDDNKLEGSIPDDICR----L---------VELYKLELGGNK 193 (585)
Q Consensus 131 ~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~N~ 193 (585)
..+++|++|+|++|.+.. .++..+..+++|++|+|++|.|++..+..+.. + ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 556666666666666665 34555666666666666666665433333322 2 666666666666
Q ss_pred cc-ccCc---ccccCcccchhhcCCCCCCC--------CccCCCCCCCcEEEccCCccc----ccCCcccCCCCCCcEEe
Q 047705 194 LS-RSIP---ACFNNLIALRILSLGSNDPL--------PLEIGNLKVLVGIDFSMNNFS----GIIPKEIGGLKNLEYLF 257 (585)
Q Consensus 194 l~-~~~~---~~~~~l~~L~~L~l~~n~~~--------~~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~~L~ 257 (585)
++ ...+ ..+..+++|+.|++++|... +..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 65 2233 24455666666666666522 225677888999999999996 56777888999999999
Q ss_pred ecccCcccc----cCcccc--CcCCCCEEeCCCCccCc----cCChhh-ccCCccceEEeecCcCeeeC
Q 047705 258 LGYNRLQGL----IPDSFG--NLISLKFLNLSNNNLSG----AIPASL-EKLSYLEDLNLSFNKLEGEI 315 (585)
Q Consensus 258 ls~N~l~~~----~~~~~~--~l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~l~l~~N~l~~~~ 315 (585)
|++|++++. ++..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 999999876 455663 38999999999999997 477777 56899999999999987543
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.4e-24 Score=215.51 Aligned_cols=227 Identities=16% Similarity=0.163 Sum_probs=176.7
Q ss_pred CCCCEEecCCCcccccCCc---cccCCCCCCEEecCCCcCCCcCCcccc-CCCCCccEEEccCCCCCCCcc---CccccC
Q 047705 10 QNLEELDLRQNKLIGTVPV---AIFNVSTLKLLGLQDNSLSGSLSSITD-VRLPNLEELVLWGNNFSELNF---LSSLSN 82 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~---~~~~~~ 82 (585)
..++.|.+.++.++..... .+..+++|++|+|++|.+++..+...+ ..+++|++|+|++|+++.... ...+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888877532111 233456799999999999877766543 678999999999999986321 023457
Q ss_pred CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceec---C-CccccCCCCccEEEeeCCccccccch---hhh
Q 047705 83 CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGD---I-PEEIGNLTNLITIDLGGNKLNGSILI---TLS 155 (585)
Q Consensus 83 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~ 155 (585)
+++|++|+|++|++.+..+. .++.++. |++|+|++|++.+. . +..+..+++|++|+|++|+++...+. .+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCE-QVRAFPA-LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTT-SCCCCTT-CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHH-HhccCCC-CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHh
Confidence 89999999999999877665 5677776 99999999997652 2 23347899999999999999743332 367
Q ss_pred CCCCCceEEccCCCCCccCcccccCC---CCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCC-ccCCCCCCCcE
Q 047705 156 KLQKLQGLVLDDNKLEGSIPDDICRL---VELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLP-LEIGNLKVLVG 231 (585)
Q Consensus 156 ~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~l~~L~~ 231 (585)
++++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|.... +.+..+++|+.
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~ 298 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDN 298 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccE
Confidence 89999999999999998878777776 69999999999999 5566554 799999999998332 34788999999
Q ss_pred EEccCCcccc
Q 047705 232 IDFSMNNFSG 241 (585)
Q Consensus 232 L~ls~N~l~~ 241 (585)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.3e-23 Score=209.76 Aligned_cols=194 Identities=22% Similarity=0.301 Sum_probs=120.0
Q ss_pred ccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhccc
Q 047705 30 IFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLS 109 (585)
Q Consensus 30 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 109 (585)
+..+++|++|++++|.++ .++. +..+++|++|+|++|+++.++. +..+++|++|+|++|+++++. .+..++
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~~--~~~l~~L~~L~L~~n~i~~~~~---~~~l~~L~~L~L~~n~l~~~~---~~~~l~ 107 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAP---LKNLTKITELELSGNPLKNVS---AIAGLQ 107 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG---GTTCCSCCEEECCSCCCSCCG---GGTTCT
T ss_pred HHHcCCcCEEEeeCCCcc-Cchh--hhccCCCCEEEccCCcCCCChh---HccCCCCCEEEccCCcCCCch---hhcCCC
Confidence 344556666666666655 2332 2245666666666666665542 555666666666666655431 244444
Q ss_pred ccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEc
Q 047705 110 HSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLEL 189 (585)
Q Consensus 110 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 189 (585)
. |++|++++|.+++.. .+..+++|++|++++|.+.+..+ +..+++|++|+|++|++++..+ +..+++|+.|++
T Consensus 108 ~-L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 180 (308)
T 1h6u_A 108 S-IKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180 (308)
T ss_dssp T-CCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred C-CCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEEC
Confidence 4 666666666665432 26667777777777777765443 6667777777777777764433 666777777777
Q ss_pred CCCcccccCcccccCcccchhhcCCCCC-CCCccCCCCCCCcEEEccCCcccc
Q 047705 190 GGNKLSRSIPACFNNLIALRILSLGSND-PLPLEIGNLKVLVGIDFSMNNFSG 241 (585)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~~L~~L~ls~N~l~~ 241 (585)
++|.+++..+ +..+++|++|++++|. .....+..+++|+.|++++|.+++
T Consensus 181 ~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 181 DDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred CCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 7777764333 6667777777777776 111246778889999999999975
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.6e-25 Score=227.57 Aligned_cols=258 Identities=16% Similarity=0.166 Sum_probs=175.6
Q ss_pred EEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccC---ccccCCC-CCcEEEccCCCCcccCCcchhhcc----c
Q 047705 38 LLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFL---SSLSNCK-SLTVIGLSNNPLDGILPKTSIGNL----S 109 (585)
Q Consensus 38 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~----~ 109 (585)
++.|++|.+++.++... ...++|++|+|++|.++..+.. ..|..++ +|++|+|++|++++..+. .+..+ .
T Consensus 2 ~~~ls~n~~~~~~~~~~-~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~-~l~~~l~~~~ 79 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFT-SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSD-ELVQILAAIP 79 (362)
T ss_dssp EEECCCCTTCCHHHHHH-TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHH-HHHHHHHTSC
T ss_pred ccccccccchHHHHHHH-hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHH-HHHHHHhccC
Confidence 46788898887666543 2345599999999998887521 3467788 899999999998766554 33333 1
Q ss_pred ccccEEEeecCcceecCCccc----cCC-CCccEEEeeCCccccccchhhh----C-CCCCceEEccCCCCCccCccc--
Q 047705 110 HSLEDFQMHNCNVTGDIPEEI----GNL-TNLITIDLGGNKLNGSILITLS----K-LQKLQGLVLDDNKLEGSIPDD-- 177 (585)
Q Consensus 110 ~~L~~L~l~~n~l~~~~~~~~----~~l-~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~~-- 177 (585)
.+|++|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+. . .++|++|+|++|+|++..+..
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 347777887777776665533 333 6777777777777766555443 2 257777777777777543333
Q ss_pred --ccCCC-CCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCC-CCCcEEEccCCccccc----CCcccCC
Q 047705 178 --ICRLV-ELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNL-KVLVGIDFSMNNFSGI----IPKEIGG 249 (585)
Q Consensus 178 --~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l-~~L~~L~ls~N~l~~~----~~~~~~~ 249 (585)
+..++ +|++|+|++|.+++..+..+.. .+..+ ++|+.|++++|.+++. ++..+..
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~-----------------~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAK-----------------FLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHH-----------------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHH-----------------HHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 34444 7777777777776544433321 12234 3788888888888763 3334444
Q ss_pred -CCCCcEEeecccCcccccC----ccccCcCCCCEEeCCCCccCccCC-------hhhccCCccceEEeecCcCeee
Q 047705 250 -LKNLEYLFLGYNRLQGLIP----DSFGNLISLKFLNLSNNNLSGAIP-------ASLEKLSYLEDLNLSFNKLEGE 314 (585)
Q Consensus 250 -l~~L~~L~ls~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~-------~~~~~l~~L~~l~l~~N~l~~~ 314 (585)
.++|+.|+|++|++++..+ ..+..+++|+.|++++|.+.+..+ ..+..+++|++||+++|++...
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4589999999999987544 345677899999999999654443 3566778899999999998754
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.6e-23 Score=198.98 Aligned_cols=181 Identities=25% Similarity=0.274 Sum_probs=138.8
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEE
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVI 89 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 89 (585)
.+.++++++++.++ .+|..+. ++|++|+|++|.|++..+ ..+..+++|++|+|++|+|+.++. ..|..+++|++|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L 88 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSA-GVFDDLTELGTL 88 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCT-TTTTTCTTCCEE
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCH-hHhccCCcCCEE
Confidence 45678888888887 5666555 578888888888874443 344578888888888888888875 678888888888
Q ss_pred EccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC
Q 047705 90 GLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK 169 (585)
Q Consensus 90 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 169 (585)
+|++|+++++.+. .+..++. |++|+|++|++++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+
T Consensus 89 ~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 89 GLANNQLASLPLG-VFDHLTQ-LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp ECTTSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccChh-HhcccCC-CCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 8888888766554 5566665 8888888888887777777778888888888888887777778888888888888888
Q ss_pred CCccCcccccCCCCCcEEEcCCCccccc
Q 047705 170 LEGSIPDDICRLVELYKLELGGNKLSRS 197 (585)
Q Consensus 170 l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 197 (585)
|++..+..|..+++|++|+|++|.+...
T Consensus 167 l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 167 LQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 8877777777788888888888887653
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=5.5e-23 Score=205.23 Aligned_cols=214 Identities=21% Similarity=0.311 Sum_probs=149.0
Q ss_pred CCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccE
Q 047705 59 PNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLIT 138 (585)
Q Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 138 (585)
.++..+.+..+.++... .+..+++|++|++++|.+..+ + .+..++. |++|++++|.+++..+ +..+++|++
T Consensus 19 ~~~~~~~l~~~~~~~~~---~~~~l~~L~~L~l~~~~i~~l-~--~~~~l~~-L~~L~L~~n~i~~~~~--~~~l~~L~~ 89 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV---TQADLDGITTLSAFGTGVTTI-E--GVQYLNN-LIGLELKDNQITDLAP--LKNLTKITE 89 (308)
T ss_dssp HHHHHHHTTCSSTTSEE---CHHHHHTCCEEECTTSCCCCC-T--TGGGCTT-CCEEECCSSCCCCCGG--GTTCCSCCE
T ss_pred HHHHHHHhCCCCcCcee---cHHHcCCcCEEEeeCCCccCc-h--hhhccCC-CCEEEccCCcCCCChh--HccCCCCCE
Confidence 34455566666666642 355677888888888888654 2 2444554 6777777776665443 666666777
Q ss_pred EEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCC
Q 047705 139 IDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDP 218 (585)
Q Consensus 139 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~ 218 (585)
|+|++|++.+. ..+..+++|++|+|++|++++. + .+..+++|++|++++|.+++..+
T Consensus 90 L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~------------------- 146 (308)
T 1h6u_A 90 LELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP------------------- 146 (308)
T ss_dssp EECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-------------------
T ss_pred EEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-------------------
Confidence 77776666653 2466666666666666666643 2 26666666666666666653221
Q ss_pred CCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccC
Q 047705 219 LPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKL 298 (585)
Q Consensus 219 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 298 (585)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++.. .+..+
T Consensus 147 ----l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l 216 (308)
T 1h6u_A 147 ----LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANT 216 (308)
T ss_dssp ----GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTC
T ss_pred ----ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCC
Confidence 4556677888888888886543 8888999999999999987643 788899999999999998655 37888
Q ss_pred CccceEEeecCcCeee
Q 047705 299 SYLEDLNLSFNKLEGE 314 (585)
Q Consensus 299 ~~L~~l~l~~N~l~~~ 314 (585)
++|+.|++++|++++.
T Consensus 217 ~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 217 SNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCCEEEEEEEEEECC
T ss_pred CCCCEEEccCCeeecC
Confidence 9999999999998753
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=9.1e-25 Score=221.24 Aligned_cols=248 Identities=17% Similarity=0.134 Sum_probs=139.9
Q ss_pred CCEEecCCCcCCCcCCccccCCC--CCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhccccccc
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRL--PNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLE 113 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 113 (585)
++.|++++|.+.. ..+..+ ++++.|++++|.+...+. .+..+++|++|+|++|.+++..
T Consensus 49 ~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~--~~~~~~~L~~L~L~~~~l~~~~------------- 109 (336)
T 2ast_B 49 WQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLA--EHFSPFRVQHMDLSNSVIEVST------------- 109 (336)
T ss_dssp SSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCC--SCCCCBCCCEEECTTCEECHHH-------------
T ss_pred heeeccccccCCH----HHHHhhhhccceEEEcCCccccccch--hhccCCCCCEEEccCCCcCHHH-------------
Confidence 5556666555541 111122 455555565555555432 2334555555555555544320
Q ss_pred EEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCC-CCCcc-CcccccCCCCCcEEEcCC
Q 047705 114 DFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDN-KLEGS-IPDDICRLVELYKLELGG 191 (585)
Q Consensus 114 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~ 191 (585)
++..+..+++|++|+|++|.+.+..+..+..+++|++|+|++| .+++. ++..+..+++|++|++++
T Consensus 110 ------------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~ 177 (336)
T 2ast_B 110 ------------LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 177 (336)
T ss_dssp ------------HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred ------------HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCC
Confidence 3333444455555555555544444444444555555555555 34431 333344445555555555
Q ss_pred C-ccccc-CcccccCcc-cchhhcCCCCC------CCCccCCCCCCCcEEEccCCc-ccccCCcccCCCCCCcEEeeccc
Q 047705 192 N-KLSRS-IPACFNNLI-ALRILSLGSND------PLPLEIGNLKVLVGIDFSMNN-FSGIIPKEIGGLKNLEYLFLGYN 261 (585)
Q Consensus 192 N-~l~~~-~~~~~~~l~-~L~~L~l~~n~------~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~ls~N 261 (585)
| .+++. ++..+..++ +|++|++++|. .++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|
T Consensus 178 ~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 178 CFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5 44432 233344444 55555555442 112234567788888888888 77677778889999999999999
Q ss_pred C-cccccCccccCcCCCCEEeCCCCccCccCChhhccC-CccceEEeecCcCeeeCCCC
Q 047705 262 R-LQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKL-SYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 262 ~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~~ 318 (585)
. ++......+..+++|+.|++++| ++. ..+..+ ..++.|++++|.+++..|..
T Consensus 258 ~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 258 YDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred CCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCc
Confidence 5 33322236788899999999999 443 234443 24677778999998877653
No 344
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=3.1e-25 Score=242.52 Aligned_cols=302 Identities=13% Similarity=0.081 Sum_probs=176.8
Q ss_pred cCCCCCCEEecCCCccccc----CCccccCCCCCCEEecCCCcCCCcCCc---cccCCCCCccEEEccCCCCCCCccCcc
Q 047705 7 GNLQNLEELDLRQNKLIGT----VPVAIFNVSTLKLLGLQDNSLSGSLSS---ITDVRLPNLEELVLWGNNFSELNFLSS 79 (585)
Q Consensus 7 ~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~l~~L~~L~L~~n~l~~~~~~~~ 79 (585)
..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++.... .....+++|++|+|++|.+..++ ..
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~--~~ 238 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV--GF 238 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH--HH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH--HH
Confidence 3567777777777776654 233455667777777777777521111 01124677777777777766654 34
Q ss_pred ccCCCCCcEEEccCCCCc--------------------------ccCCcchhhcccccccEEEeecCcceecCC-ccccC
Q 047705 80 LSNCKSLTVIGLSNNPLD--------------------------GILPKTSIGNLSHSLEDFQMHNCNVTGDIP-EEIGN 132 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N~l~--------------------------~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~ 132 (585)
+..+++|++|+++++... ...|. .+..+++ |++|++++|.+++... ..+..
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~-~~~~~~~-L~~L~Ls~~~l~~~~~~~~~~~ 316 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPI-LFPFAAQ-IRKLDLLYALLETEDHCTLIQK 316 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGG-GGGGGGG-CCEEEETTCCCCHHHHHHHHTT
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHH-HHhhcCC-CcEEecCCCcCCHHHHHHHHHh
Confidence 555555555555432111 11111 3334444 7777777777654433 33566
Q ss_pred CCCccEEEeeCCcccc-ccchhhhCCCCCceEEcc-----------CCCCCccCc-ccccCCCCCcEEEcCCCcccccCc
Q 047705 133 LTNLITIDLGGNKLNG-SILITLSKLQKLQGLVLD-----------DNKLEGSIP-DDICRLVELYKLELGGNKLSRSIP 199 (585)
Q Consensus 133 l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~ 199 (585)
+++|++|+++ +.+.. ..+..+..+++|++|+++ .|.+++... .....+++|++|+++.|.+++..+
T Consensus 317 ~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 317 CPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395 (592)
T ss_dssp CTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHH
T ss_pred CcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHH
Confidence 7777777777 33332 333334567777777777 355654322 223456777777777777776555
Q ss_pred ccccC-cccchhhcCC----CCCCC--C------ccCCCCCCCcEEEccCCc--ccccCCcccC-CCCCCcEEeecccCc
Q 047705 200 ACFNN-LIALRILSLG----SNDPL--P------LEIGNLKVLVGIDFSMNN--FSGIIPKEIG-GLKNLEYLFLGYNRL 263 (585)
Q Consensus 200 ~~~~~-l~~L~~L~l~----~n~~~--~------~~~~~l~~L~~L~ls~N~--l~~~~~~~~~-~l~~L~~L~ls~N~l 263 (585)
..+.. +++|+.|+++ .|... | ..+..+++|+.|++++|. +++..+..+. .+++|++|+|++|++
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l 475 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE 475 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCS
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCC
Confidence 55544 6777777775 23311 1 114457777777776433 5444333333 367788888888877
Q ss_pred ccc-cCccccCcCCCCEEeCCCCccCccC-ChhhccCCccceEEeecCcCee
Q 047705 264 QGL-IPDSFGNLISLKFLNLSNNNLSGAI-PASLEKLSYLEDLNLSFNKLEG 313 (585)
Q Consensus 264 ~~~-~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~ 313 (585)
++. ++..+..+++|+.|++++|.+++.. +.....+++|++|++++|+++.
T Consensus 476 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp SHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred CHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 653 2344566777888888888776442 3334567778888888887653
No 345
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.88 E-value=1.6e-23 Score=218.05 Aligned_cols=163 Identities=20% Similarity=0.225 Sum_probs=123.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcCC-Ccc---------------
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIRH-RNL--------------- 472 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~ni--------------- 472 (585)
...|...+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+.+++.++| ++.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345778899999999999999965 79999999987432 2235778899999999977 211
Q ss_pred ------eeEEeeeec-----CCeEEEEEEccCCCCHHHHhh------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 047705 473 ------IKVISSCSN-----EEFKGLVLEYMPQGSLEKHLY------STNCILDIFQRLNIMIDVASALEYLHFGCSTPV 535 (585)
Q Consensus 473 ------v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 535 (585)
..+..++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+||| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 111111111 12356777766 679999884 22335778888999999999999999 9999
Q ss_pred EEcCCCCCCEEeCCCCcEEEeeecccccccCCCCccccccccccccccCC
Q 047705 536 IHCDLKPSNVLLDDNMIAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 585 (585)
Q Consensus 536 iH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 585 (585)
+||||||+|||++.++.+||+|||+++.... .....+| +.||||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 276 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPP 276 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCc
Confidence 9999999999999999999999999886422 1344577 999998
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=7.3e-23 Score=201.15 Aligned_cols=142 Identities=17% Similarity=0.165 Sum_probs=114.6
Q ss_pred HHHHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhh------------------hhHHHHHHHHHHHHhcC
Q 047705 407 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCR------------------RAFKSFDVECEIMKSIR 468 (585)
Q Consensus 407 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 468 (585)
..+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455566778899999999999999987799999999864321 13467889999999998
Q ss_pred CCcceeEEeeeecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeC
Q 047705 469 HRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLD 548 (585)
Q Consensus 469 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~ 548 (585)
|+ ++.+++.. +..|+||||++|++|.+ +.. .....++.|++.|++||| +++|+||||||+|||++
T Consensus 163 ~~---~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 GL---AVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp TS---SSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CC---CcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 54 44444433 45699999999999998 422 123469999999999999 99999999999999999
Q ss_pred CCCcEEEeeecccccc
Q 047705 549 DNMIAYLSDFGIAKLL 564 (585)
Q Consensus 549 ~~~~~kl~Dfg~a~~~ 564 (585)
++.+||+|||+|+..
T Consensus 228 -~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 228 -EEGIWIIDFPQSVEV 242 (282)
T ss_dssp -TTEEEECCCTTCEET
T ss_pred -CCcEEEEECCCCeEC
Confidence 999999999999865
No 347
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.87 E-value=1.6e-23 Score=228.82 Aligned_cols=302 Identities=14% Similarity=0.027 Sum_probs=214.7
Q ss_pred cccCCCCCCEEecCCCccc----ccCCccccCCCCCCEEecCCCcCCCcCCc-------------------------ccc
Q 047705 5 EIGNLQNLEELDLRQNKLI----GTVPVAIFNVSTLKLLGLQDNSLSGSLSS-------------------------ITD 55 (585)
Q Consensus 5 ~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-------------------------~~~ 55 (585)
.+..+++|++|+|++|.++ ...+..+.++++|++|+|++|.+.+.+.. ...
T Consensus 187 ~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 187 LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 3456778888888888776 33444556778888888888876532211 112
Q ss_pred CCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCC
Q 047705 56 VRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTN 135 (585)
Q Consensus 56 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 135 (585)
..+++|+.|+++++....++ ..+..+++|++|+|++|.+++......+..+++ |++|+++++-..+.++..+..+++
T Consensus 267 ~~~~~L~~L~l~~~~~~~l~--~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~-L~~L~L~~~~~~~~l~~~~~~~~~ 343 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPNEMP--ILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN-LEVLETRNVIGDRGLEVLAQYCKQ 343 (592)
T ss_dssp CCCTTCCEEEETTCCTTTGG--GGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT-CCEEEEEGGGHHHHHHHHHHHCTT
T ss_pred hccccccccCccccchhHHH--HHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC-CCEEeccCccCHHHHHHHHHhCCC
Confidence 23455666666565555554 457778999999999999765443334566766 999999944333344444577899
Q ss_pred ccEEEee-----------CCccccccchh-hhCCCCCceEEccCCCCCccCcccccC-CCCCcEEEcC----CCccccc-
Q 047705 136 LITIDLG-----------GNKLNGSILIT-LSKLQKLQGLVLDDNKLEGSIPDDICR-LVELYKLELG----GNKLSRS- 197 (585)
Q Consensus 136 L~~L~L~-----------~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~- 197 (585)
|++|+++ .|.++...... +.++++|++|+++.|.+++..+..+.. +++|++|+++ .|.+++.
T Consensus 344 L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p 423 (592)
T 3ogk_B 344 LKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLP 423 (592)
T ss_dssp CCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCC
T ss_pred CCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCch
Confidence 9999999 36776543333 557999999999999999877777766 8999999996 7788864
Q ss_pred ----CcccccCcccchhhcCCCCC--CC---CccC-CCCCCCcEEEccCCccccc-CCcccCCCCCCcEEeecccCcccc
Q 047705 198 ----IPACFNNLIALRILSLGSND--PL---PLEI-GNLKVLVGIDFSMNNFSGI-IPKEIGGLKNLEYLFLGYNRLQGL 266 (585)
Q Consensus 198 ----~~~~~~~l~~L~~L~l~~n~--~~---~~~~-~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~ 266 (585)
++..+..+++|+.|+++.+. .. +..+ ..+++|+.|++++|.+++. .+..+.++++|++|+|++|++++.
T Consensus 424 ~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 424 LDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp CHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 33447779999999997543 11 1122 3478999999999999863 344567899999999999998765
Q ss_pred c-CccccCcCCCCEEeCCCCccCccCChhhc-cCCccceEEeecC
Q 047705 267 I-PDSFGNLISLKFLNLSNNNLSGAIPASLE-KLSYLEDLNLSFN 309 (585)
Q Consensus 267 ~-~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~N 309 (585)
. +..+..+++|+.|++++|++++.....+. .++.+....+..+
T Consensus 504 ~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 504 AIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 3 33446789999999999999866444443 5677766666554
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.2e-21 Score=183.97 Aligned_cols=181 Identities=23% Similarity=0.233 Sum_probs=105.8
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQ 116 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 116 (585)
+.++.+++.++..+... .++|++|+|++|+++.++. ..|..+++|++|+|++|+++++
T Consensus 10 ~~v~c~~~~l~~~p~~~----~~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~----------------- 67 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI----PAQTTYLDLETNSLKSLPN-GVFDELTSLTQLYLGGNKLQSL----------------- 67 (208)
T ss_dssp TEEECCSSCCSSCCSCC----CTTCSEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCCC-----------------
T ss_pred CEEEecCCCccCCCCCC----CCCCcEEEcCCCccCcCCh-hhhcccccCcEEECCCCccCcc-----------------
Confidence 45666666665333221 3466677777776666654 5566666666666666666533
Q ss_pred eecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 117 MHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 117 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
.+..|..+++|++|+|++|+++++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+++
T Consensus 68 ---------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 138 (208)
T 2o6s_A 68 ---------PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138 (208)
T ss_dssp ---------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred ---------ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce
Confidence 22334556666666666666665555556666666666666666665555556666666666666666664
Q ss_pred cCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCC
Q 047705 197 SIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLIS 276 (585)
Q Consensus 197 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 276 (585)
..+..|.. +++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 139 ~~~~~~~~---------------------l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 139 VPDGVFDR---------------------LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCTTTTTT---------------------CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eCHHHhcc---------------------CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 43333333 3344444455554432 3455666667777777666666665543
No 349
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.6e-21 Score=199.32 Aligned_cols=162 Identities=23% Similarity=0.236 Sum_probs=106.8
Q ss_pred CccEEEeeCCccccccchhhh-CCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcC
Q 047705 135 NLITIDLGGNKLNGSILITLS-KLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSL 213 (585)
Q Consensus 135 ~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 213 (585)
.++.|+|++|+|+++.+..|. ++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+...+..
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------------ 107 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFL------------ 107 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT------------
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHH------------
Confidence 355556666665555555555 5566666666666666555555666666666666666665433332
Q ss_pred CCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccc---cCcCCCCEEeCCCCccCcc
Q 047705 214 GSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF---GNLISLKFLNLSNNNLSGA 290 (585)
Q Consensus 214 ~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~~ 290 (585)
+..+++|+.|+|++|+++++.+..|.++++|+.|+|++|+++++.+..| ..+++|+.|+|++|+|++.
T Consensus 108 ---------~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 108 ---------FSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp ---------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred ---------hCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 2334445555566666666667777778888888888888876555555 5678888999999998876
Q ss_pred CChhhccCCc--cceEEeecCcCeeeCCC
Q 047705 291 IPASLEKLSY--LEDLNLSFNKLEGEIPR 317 (585)
Q Consensus 291 ~~~~~~~l~~--L~~l~l~~N~l~~~~~~ 317 (585)
.+..+..++. ++.|+|++|+|.|+|..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 6677788776 48899999999988763
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.5e-21 Score=181.71 Aligned_cols=181 Identities=23% Similarity=0.222 Sum_probs=135.2
Q ss_pred CCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEc
Q 047705 12 LEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGL 91 (585)
Q Consensus 12 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 91 (585)
-+.++.+++.++ .+|..+ .++|++|+|++|.+++ ++...+..+++|++|+|++|+++.++. ..|..+++|++|+|
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPN-GVFNKLTSLTYLNL 83 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEEC
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccCh-hhcCCCCCcCEEEC
Confidence 367888899887 455544 4589999999999984 444445678999999999999999986 77899999999999
Q ss_pred cCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCC
Q 047705 92 SNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLE 171 (585)
Q Consensus 92 s~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 171 (585)
++|+++++.+. .++.++. |++|++++|++++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|.+.
T Consensus 84 s~n~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 84 STNQLQSLPNG-VFDKLTQ-LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCccCHh-HhcCccC-CCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 99999866544 4555655 777777777777666666777777777777777777666666777777777777777665
Q ss_pred ccCcccccCCCCCcEEEcCCCcccccCcccccCcc
Q 047705 172 GSIPDDICRLVELYKLELGGNKLSRSIPACFNNLI 206 (585)
Q Consensus 172 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 206 (585)
+ .+++|++|+++.|.+++.+|..++.++
T Consensus 162 ~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 C-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp C-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred c-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 3 344677777777777777776655543
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=2.3e-21 Score=191.73 Aligned_cols=173 Identities=25% Similarity=0.311 Sum_probs=112.9
Q ss_pred ccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCC
Q 047705 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKS 85 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 85 (585)
++++++|++|++++|.++.. +.+..+++|++|+|++|.+++..+ +..+++|++|+|++|+++.++ .+..+++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~---l~~l~~L~~L~l~~n~l~~~~---~l~~l~~ 113 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP---LANLKNLGWLFLDENKVKDLS---SLKDLKK 113 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCGG---GGTTCTT
T ss_pred hhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc---cccCCCCCEEECCCCcCCCCh---hhccCCC
Confidence 34566777777777777643 246777777777777777764433 346777777777777777754 3677777
Q ss_pred CcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEc
Q 047705 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVL 165 (585)
Q Consensus 86 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 165 (585)
|++|+|++|+++++ + .+..++. |+.|++++|.+++. ..+..+++|++|+|++|++.+..+ +..+++|++|+|
T Consensus 114 L~~L~L~~n~i~~~-~--~l~~l~~-L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 114 LKSLSLEHNGISDI-N--GLVHLPQ-LESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CCEEECTTSCCCCC-G--GGGGCTT-CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCEEECCCCcCCCC-h--hhcCCCC-CCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 77777777777654 1 3455554 77777777766654 456666677777777777665544 666667777777
Q ss_pred cCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 166 DDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 166 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
++|.|++. + .+..+++|+.|++++|.++.
T Consensus 186 ~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 186 SKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 77766643 3 36666667777777766654
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=7.8e-22 Score=186.71 Aligned_cols=158 Identities=21% Similarity=0.323 Sum_probs=129.9
Q ss_pred cEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCC
Q 047705 137 ITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSN 216 (585)
Q Consensus 137 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 216 (585)
+.+++++|.++.++ ..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|.|++..|..
T Consensus 14 ~~v~c~~~~l~~iP-~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~--------------- 75 (220)
T 2v9t_B 14 NIVDCRGKGLTEIP-TNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA--------------- 75 (220)
T ss_dssp TEEECTTSCCSSCC-SSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT---------------
T ss_pred CEEEcCCCCcCcCC-CccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH---------------
Confidence 57888888888543 3332 57888888888888777778888888888888888887655554
Q ss_pred CCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhc
Q 047705 217 DPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLE 296 (585)
Q Consensus 217 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 296 (585)
+.++++|+.|+|++|.++++.+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+.
T Consensus 76 ------~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 76 ------FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp ------TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ------hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 44556677777888888877777789999999999999999988889999999999999999999988888899
Q ss_pred cCCccceEEeecCcCeeeCCCC
Q 047705 297 KLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 297 ~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
.+++|+.|++++|+|.|+|...
T Consensus 150 ~l~~L~~L~L~~N~~~c~c~l~ 171 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFICDCHLK 171 (220)
T ss_dssp TCTTCCEEECCSSCEECSGGGH
T ss_pred CCCCCCEEEeCCCCcCCCCccH
Confidence 9999999999999999988743
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=6e-21 Score=206.75 Aligned_cols=188 Identities=24% Similarity=0.294 Sum_probs=142.4
Q ss_pred ccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCC
Q 047705 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKS 85 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 85 (585)
+..+++|+.|+|++|.++.. + .+..+++|++|+|++|.|++.++ +..+++|++|+|++|+|+.++ .+..+++
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~---~l~~l~~ 110 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKDLS---SLKDLKK 110 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCCCT---TSTTCTT
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCCCh---hhccCCC
Confidence 45678888888888888643 3 58888888888888888885544 446888888888888888764 4788888
Q ss_pred CcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEc
Q 047705 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVL 165 (585)
Q Consensus 86 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 165 (585)
|++|+|++|++.++ + .+..++. |+.|+|++|.+++. ..+..+++|+.|+|++|+|.+..+ |..+++|+.|+|
T Consensus 111 L~~L~Ls~N~l~~l-~--~l~~l~~-L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 111 LKSLSLEHNGISDI-N--GLVHLPQ-LESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CCEEECTTSCCCCC-G--GGGGCTT-CSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCEEEecCCCCCCC-c--cccCCCc-cCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 88888888888764 2 3566665 88888888888765 567888888888888888887666 788888888888
Q ss_pred cCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhh
Q 047705 166 DDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRIL 211 (585)
Q Consensus 166 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (585)
++|+|+++ ..+..+++|+.|+|++|.+.+.....+..+..+..+
T Consensus 183 s~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~l 226 (605)
T 1m9s_A 183 SKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226 (605)
T ss_dssp CSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEECCC
T ss_pred cCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEecccc
Confidence 88888854 357788888888888888876544444444444433
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=185.54 Aligned_cols=158 Identities=25% Similarity=0.298 Sum_probs=130.5
Q ss_pred cEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCc-ccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCC
Q 047705 137 ITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIP-DDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGS 215 (585)
Q Consensus 137 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 215 (585)
+.+++++|.++.+ |..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|.|++..+..
T Consensus 14 ~~l~~s~n~l~~i-P~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~-------------- 76 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA-------------- 76 (220)
T ss_dssp TEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTT--------------
T ss_pred CEeEeCCCCcccC-ccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHH--------------
Confidence 5788888888854 43332 356788888888887644 45778888888888888887655444
Q ss_pred CCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhh
Q 047705 216 NDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASL 295 (585)
Q Consensus 216 n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 295 (585)
+..+++|+.|+|++|.+++..+..|.++++|++|+|++|+++++.|..|..+++|+.|+|++|+|++..|..|
T Consensus 77 -------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 77 -------FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp -------TTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred -------hCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 4556667778888899998888889999999999999999999889999999999999999999998889999
Q ss_pred ccCCccceEEeecCcCeeeCCCC
Q 047705 296 EKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 296 ~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
..+++|+.|++++|+|.|.|+..
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~l~ 172 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCYLA 172 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGGGH
T ss_pred cCCCCCCEEEecCcCCcCCCchH
Confidence 99999999999999999998854
No 355
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=9.7e-24 Score=230.71 Aligned_cols=320 Identities=14% Similarity=0.110 Sum_probs=188.6
Q ss_pred cCCCCCCEEecCCCcccccCCcccc-CCCCCCEEecCCC-cCCCc-CCccccCCCCCccEEEccCCCCCCCccCcc----
Q 047705 7 GNLQNLEELDLRQNKLIGTVPVAIF-NVSTLKLLGLQDN-SLSGS-LSSITDVRLPNLEELVLWGNNFSELNFLSS---- 79 (585)
Q Consensus 7 ~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---- 79 (585)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++.. ...+++|++|+|++|.++.... ..
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-~~~~~~L~~L~L~~~~i~~~~~-~~l~~~ 179 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAI-AATCRNLKELDLRESDVDDVSG-HWLSHF 179 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHH-HHHCTTCCEEECTTCEEECCCG-GGGGGS
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHH-HHhCCCCCEEeCcCCccCCcch-HHHHHH
Confidence 4577888999988888777677675 6888999999888 44421 2221 1257889999999988776442 22
Q ss_pred ccCCCCCcEEEccCCCCcccCCcchh----hcccccccEEEeecC-cceecCCccccCCCCccEEEeeCCc---------
Q 047705 80 LSNCKSLTVIGLSNNPLDGILPKTSI----GNLSHSLEDFQMHNC-NVTGDIPEEIGNLTNLITIDLGGNK--------- 145 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N~l~~~~~~~~~----~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~N~--------- 145 (585)
...+++|++|+|++|. . ......+ ..+++ |++|++++| .+.+ ++..+..+++|++|+++.+.
T Consensus 180 ~~~~~~L~~L~l~~~~-~-~~~~~~l~~l~~~~~~-L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 255 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLA-S-EVSFSALERLVTRCPN-LKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYS 255 (594)
T ss_dssp CTTCCCCCEEECTTCC-S-CCCHHHHHHHHHHCTT-CCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHH
T ss_pred hhcCCcCcEEEecccC-C-cCCHHHHHHHHHhCCC-CcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHH
Confidence 3367789999998887 1 1111122 23344 899999888 3433 55566667777777654442
Q ss_pred -----------------ccc----ccchhhhCCCCCceEEccCCCCCccCc-ccccCCCCCcEEEcCCCccccc-Ccccc
Q 047705 146 -----------------LNG----SILITLSKLQKLQGLVLDDNKLEGSIP-DDICRLVELYKLELGGNKLSRS-IPACF 202 (585)
Q Consensus 146 -----------------l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~ 202 (585)
+.. ..+..+..+++|++|+|++|.+++... ..+..+++|++|++++| ++.. .+...
T Consensus 256 ~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~ 334 (594)
T 2p1m_B 256 GLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLA 334 (594)
T ss_dssp HHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHH
T ss_pred HHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHH
Confidence 111 123333467888888888888764332 23457788888888887 4322 22233
Q ss_pred cCcccchhhcCCC---------CCCCCcc----CCCCCCCcEEEccCCcccccCCcccC-CCCCCcEEeec--c----cC
Q 047705 203 NNLIALRILSLGS---------NDPLPLE----IGNLKVLVGIDFSMNNFSGIIPKEIG-GLKNLEYLFLG--Y----NR 262 (585)
Q Consensus 203 ~~l~~L~~L~l~~---------n~~~~~~----~~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~ls--~----N~ 262 (585)
..+++|+.|+++. +...... ...+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.
T Consensus 335 ~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~ 414 (594)
T 2p1m_B 335 STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDY 414 (594)
T ss_dssp HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCT
T ss_pred HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccc
Confidence 4577788887732 2211111 12366777777777777654444443 36777777777 3 44
Q ss_pred ccccc-----CccccCcCCCCEEeCCCCccCccCChhhcc-CCccceEEeecCcCeeeCCCC--CCCCCCCccccCCCCc
Q 047705 263 LQGLI-----PDSFGNLISLKFLNLSNNNLSGAIPASLEK-LSYLEDLNLSFNKLEGEIPRG--GSFGNFSAESFEGNEL 334 (585)
Q Consensus 263 l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~l~l~~N~l~~~~~~~--~~~~~~~~~~~~~n~~ 334 (585)
+++.. +..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.++...... ..+..++.+++.+|+.
T Consensus 415 l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 415 LTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp TTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred ccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 44211 11244556666676655 555444444443 566666666666654321110 1234555556665554
No 356
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=5.6e-23 Score=224.68 Aligned_cols=85 Identities=19% Similarity=0.247 Sum_probs=54.7
Q ss_pred CCCCCCEEecCCC-ccccc-CCccccCCCCCCEEecCCCcCCCcCCc---cccCCCCCccEEEccCCCCCCCccCcc---
Q 047705 8 NLQNLEELDLRQN-KLIGT-VPVAIFNVSTLKLLGLQDNSLSGSLSS---ITDVRLPNLEELVLWGNNFSELNFLSS--- 79 (585)
Q Consensus 8 ~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~l~~L~~L~L~~n~l~~~~~~~~--- 79 (585)
.+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++.... .....+++|++|+|++|. ..++. ..
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~-~~l~~ 205 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSF-SALER 205 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCH-HHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCH-HHHHH
Confidence 5788888888888 55433 334445788888888888887632211 112256788888888886 33321 22
Q ss_pred -ccCCCCCcEEEccCC
Q 047705 80 -LSNCKSLTVIGLSNN 94 (585)
Q Consensus 80 -~~~l~~L~~L~Ls~N 94 (585)
+..+++|++|+|++|
T Consensus 206 l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRA 221 (594)
T ss_dssp HHHHCTTCCEEECCTT
T ss_pred HHHhCCCCcEEecCCC
Confidence 234588888888877
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=1.9e-20 Score=177.21 Aligned_cols=153 Identities=20% Similarity=0.192 Sum_probs=95.1
Q ss_pred EEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEe
Q 047705 38 LLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQM 117 (585)
Q Consensus 38 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l 117 (585)
++++++|.+++.+... .+.+++|+|++|+|+.++....|..+++|++|+|++|+|+++.+. .+..++. |++|+|
T Consensus 15 ~l~~s~n~l~~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~-~~~~l~~-L~~L~L 88 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEG-AFEGASG-VNEILL 88 (220)
T ss_dssp EEECCSSCCSSCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEEEC
T ss_pred EeEeCCCCcccCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHH-HhCCCCC-CCEEEC
Confidence 5555555555322211 234455555555555553223455555555555555555544443 3444443 555555
Q ss_pred ecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 118 HNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 118 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
++|.+++..+..|..+++|++|+|++|+|.++.+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+..
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 5555555555567777777777777777777777777777777777777777777777777777777888888777764
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.5e-20 Score=191.98 Aligned_cols=173 Identities=22% Similarity=0.166 Sum_probs=112.0
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcccc-CCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLS-NCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
+++++++|.++..+... .+.+++|+|++|+|+.++. ..|. .+++|++|+|++|+|+++.+. .+.+++. |+.|
T Consensus 21 ~~l~c~~~~l~~iP~~~----~~~l~~L~Ls~N~l~~l~~-~~~~~~l~~L~~L~L~~N~i~~i~~~-~~~~l~~-L~~L 93 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSL----PSYTALLDLSHNNLSRLRA-EWTPTRLTNLHSLLLSHNHLNFISSE-AFVPVPN-LRYL 93 (361)
T ss_dssp TEEECCSSCCSSCCSSC----CTTCSEEECCSSCCCEECT-TSSSSCCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEE
T ss_pred CEEEeCCCCcCccCccC----CCCCCEEECCCCCCCccCh-hhhhhcccccCEEECCCCcCCccChh-hccCCCC-CCEE
Confidence 46666666666333222 2346666666666666654 5555 666666666666666655544 4555554 6666
Q ss_pred EeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccc---cCCCCCcEEEcCCC
Q 047705 116 QMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDI---CRLVELYKLELGGN 192 (585)
Q Consensus 116 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N 192 (585)
+|++|++++..+..|..+++|++|+|++|+|.++.+..|.++++|+.|+|++|+|+++.+..| ..+++|+.|+|++|
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 666666666666677777888888888888877777778888888888888888876555555 45777888888888
Q ss_pred cccccCcccccCcccc--hhhcCCCC
Q 047705 193 KLSRSIPACFNNLIAL--RILSLGSN 216 (585)
Q Consensus 193 ~l~~~~~~~~~~l~~L--~~L~l~~n 216 (585)
+|++..+..|..++.+ +.|+|++|
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCccCHHHhhhccHhhcceEEecCC
Confidence 8876555556555543 44444333
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.1e-20 Score=202.39 Aligned_cols=196 Identities=23% Similarity=0.242 Sum_probs=138.5
Q ss_pred CCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccE
Q 047705 35 TLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLED 114 (585)
Q Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 114 (585)
+|++|+|++|.|++.++.. +++|++|+|++|+|+.+| ..+++|++|+|++|+|++ +|. ++. +|++
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l----~~~L~~L~Ls~N~l~~ip-----~~l~~L~~L~Ls~N~l~~-ip~--l~~---~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL----PPQITVLEITQNALISLP-----ELPASLEYLDACDNRLST-LPE--LPA---SLKH 124 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC----CTTCSEEECCSSCCSCCC-----CCCTTCCEEECCSSCCSC-CCC--CCT---TCCE
T ss_pred CccEEEeCCCCCCccCHhH----cCCCCEEECcCCCCcccc-----cccCCCCEEEccCCCCCC-cch--hhc---CCCE
Confidence 7888888888887533322 367888888888888775 236788888888888876 333 222 4888
Q ss_pred EEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcc
Q 047705 115 FQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKL 194 (585)
Q Consensus 115 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 194 (585)
|+|++|++++ +|. .+++|++|+|++|.|+++.. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|.|
T Consensus 125 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 125 LDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred EECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 8888888876 444 57888888888888886433 56788888888888886 554 54 7888888888888
Q ss_pred cccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCc
Q 047705 195 SRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNL 274 (585)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 274 (585)
+ .+|. |.. +| ....+.|+.|+|++|.|+. +|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 193 ~-~lp~-~~~--~L--------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 193 E-SLPA-VPV--RN--------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp S-SCCC-CC------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred C-chhh-HHH--hh--------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 7 4444 332 22 1123345888889999884 67777779999999999999988888877765
Q ss_pred CC
Q 047705 275 IS 276 (585)
Q Consensus 275 ~~ 276 (585)
+.
T Consensus 254 ~~ 255 (571)
T 3cvr_A 254 TA 255 (571)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 360
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.6e-20 Score=201.23 Aligned_cols=189 Identities=25% Similarity=0.307 Sum_probs=134.2
Q ss_pred CccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEE
Q 047705 60 NLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITI 139 (585)
Q Consensus 60 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 139 (585)
+|++|+|++|+|+.+|. . + .++|++|+|++|+|+.+ |. .+ .+|++|+|++|++++ +|. +.. +|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~-~-l--~~~L~~L~Ls~N~l~~i-p~----~l-~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPD-N-L--PPQITVLEITQNALISL-PE----LP-ASLEYLDACDNRLST-LPE-LPA--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCS-C-C--CTTCSEEECCSSCCSCC-CC----CC-TTCCEEECCSSCCSC-CCC-CCT--TCCEE
T ss_pred CccEEEeCCCCCCccCH-h-H--cCCCCEEECcCCCCccc-cc----cc-CCCCEEEccCCCCCC-cch-hhc--CCCEE
Confidence 78888888888888774 2 2 36788888888888743 31 22 347777777777776 444 544 77777
Q ss_pred EeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCC
Q 047705 140 DLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPL 219 (585)
Q Consensus 140 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~ 219 (585)
+|++|+|+++.+ .+++|+.|+|++|+|++ +|. .+++|++|+|++|.|++ +|. |
T Consensus 126 ~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l----------------- 178 (571)
T 3cvr_A 126 DVDNNQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-L----------------- 178 (571)
T ss_dssp ECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-C-----------------
T ss_pred ECCCCcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-h-----------------
Confidence 777777776333 56677777777777775 343 45677777777777764 333 2
Q ss_pred CccCCCCCCCcEEEccCCcccccCCcccCCCCCC-------cEEeecccCcccccCccccCcCCCCEEeCCCCccCccCC
Q 047705 220 PLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNL-------EYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIP 292 (585)
Q Consensus 220 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L-------~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 292 (585)
. ++|+.|++++|.|+. +|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|
T Consensus 179 ----~--~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 179 ----P--ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp ----C--TTCCEEECCSSCCSS-CCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ----h--CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 2 567778888888884 454 554 67 999999999995 68778889999999999999999999
Q ss_pred hhhccCCc
Q 047705 293 ASLEKLSY 300 (585)
Q Consensus 293 ~~~~~l~~ 300 (585)
..+..+..
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 88877644
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.9e-20 Score=185.13 Aligned_cols=189 Identities=25% Similarity=0.320 Sum_probs=133.7
Q ss_pred CcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEc
Q 047705 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVL 165 (585)
Q Consensus 86 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 165 (585)
+..+.+..+.+.+..+ ...++. |+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|
T Consensus 26 ~~~~~l~~~~~~~~~~---~~~l~~-L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT---QNELNS-IDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHTTCSCTTSEEC---HHHHHT-CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHhcCCCcccccc---hhhcCc-ccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 3344555666554422 233444 77777777777644 2 36667777777777777775544 667777777777
Q ss_pred cCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCc
Q 047705 166 DDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPK 245 (585)
Q Consensus 166 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 245 (585)
++|++++. + .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. .
T Consensus 98 ~~n~l~~~-~-~l~~l~~L~~L~L~~n~i~~~-----------------------~~l~~l~~L~~L~l~~n~l~~~--~ 150 (291)
T 1h6t_A 98 DENKVKDL-S-SLKDLKKLKSLSLEHNGISDI-----------------------NGLVHLPQLESLYLGNNKITDI--T 150 (291)
T ss_dssp CSSCCCCG-G-GGTTCTTCCEEECTTSCCCCC-----------------------GGGGGCTTCCEEECCSSCCCCC--G
T ss_pred CCCcCCCC-h-hhccCCCCCEEECCCCcCCCC-----------------------hhhcCCCCCCEEEccCCcCCcc--h
Confidence 77777642 2 366677777777777776642 2345567788888888888865 5
Q ss_pred ccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCee
Q 047705 246 EIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEG 313 (585)
Q Consensus 246 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 313 (585)
.+..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|+++.
T Consensus 151 ~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 151 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 68888999999999999987655 88889999999999999864 3 48889999999999999875
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=2.4e-20 Score=202.03 Aligned_cols=187 Identities=25% Similarity=0.393 Sum_probs=137.7
Q ss_pred CCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEE
Q 047705 11 NLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIG 90 (585)
Q Consensus 11 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 90 (585)
++..++++.+.+....+ +..+++|++|+|++|.|+ .++. +..+++|++|+|++|+|+.++. +..+++|++|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~ 93 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP---LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG---GGGCTTCCEEE
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh---hccCCCCCEEE
Confidence 34556677777664433 577888999999999987 4443 3468899999999999988863 88889999999
Q ss_pred ccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCC
Q 047705 91 LSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKL 170 (585)
Q Consensus 91 Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 170 (585)
|++|++.++. .+..++. |+.|+|++|.+++. ..+..+++|+.|+|++|++.++ ..|..+++|+.|+|++|+|
T Consensus 94 Ls~N~l~~l~---~l~~l~~-L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l 165 (605)
T 1m9s_A 94 LDENKIKDLS---SLKDLKK-LKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 165 (605)
T ss_dssp CCSSCCCCCT---TSTTCTT-CCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCC
T ss_pred CcCCCCCCCh---hhccCCC-CCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcC
Confidence 9999887642 3556665 88888888888753 3477788888888888888765 5677788888888888888
Q ss_pred CccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC
Q 047705 171 EGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND 217 (585)
Q Consensus 171 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (585)
++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.
T Consensus 166 ~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 166 SDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEE
T ss_pred CCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCc
Confidence 76655 77788888888888888753 246666666666666665
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.9e-20 Score=174.33 Aligned_cols=152 Identities=22% Similarity=0.257 Sum_probs=104.1
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQ 116 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 116 (585)
+.++++++.++..+... .++|++|+|++|+|+.++. ..|..+++|++|+|++|+|+++.|. .+.+++. |++|+
T Consensus 14 ~~v~c~~~~l~~iP~~l----~~~l~~L~l~~n~i~~i~~-~~~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~-L~~L~ 86 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNL----PETITEIRLEQNTIKVIPP-GAFSPYKKLRRIDLSNNQISELAPD-AFQGLRS-LNSLV 86 (220)
T ss_dssp TEEECTTSCCSSCCSSC----CTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECCSSCCCEECTT-TTTTCSS-CCEEE
T ss_pred CEEEcCCCCcCcCCCcc----CcCCCEEECCCCcCCCcCH-hHhhCCCCCCEEECCCCcCCCcCHH-HhhCCcC-CCEEE
Confidence 45666666666333222 2466777777777766664 5666677777777777777655554 4455544 66666
Q ss_pred eecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccc
Q 047705 117 MHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLS 195 (585)
Q Consensus 117 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (585)
|++|+++...+..|..+++|++|+|++|+|.++.+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|.+.
T Consensus 87 Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 87 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 6666666555566777778888888888887777777778888888888888888777777777788888888888775
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=4.6e-21 Score=186.62 Aligned_cols=172 Identities=23% Similarity=0.298 Sum_probs=144.4
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCc
Q 047705 8 NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLT 87 (585)
Q Consensus 8 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 87 (585)
.+.+++.+++++|.++... .+..+++|++|++++|.|+ .++. +..+++|++|+|++|+|+.++. +..+++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~L~~N~i~~~~~---l~~l~~L~ 88 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLAG--MQFFTNLKELHLSHNQISDLSP---LKDLTKLE 88 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG---GTTCSSCC
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cchH--HhhCCCCCEEECCCCccCCChh---hccCCCCC
Confidence 4566778889999987544 6889999999999999998 4553 3478999999999999999873 89999999
Q ss_pred EEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC
Q 047705 88 VIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167 (585)
Q Consensus 88 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 167 (585)
+|+|++|+++++.+. .. .+|+.|++++|++++. ..+..+++|++|+|++|+++++. .+..+++|++|+|++
T Consensus 89 ~L~L~~N~l~~l~~~---~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~ 159 (263)
T 1xeu_A 89 ELSVNRNRLKNLNGI---PS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHG 159 (263)
T ss_dssp EEECCSSCCSCCTTC---CC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTT
T ss_pred EEECCCCccCCcCcc---cc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCC
Confidence 999999999875432 12 3599999999999864 35889999999999999999753 688999999999999
Q ss_pred CCCCccCcccccCCCCCcEEEcCCCcccccC
Q 047705 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSI 198 (585)
Q Consensus 168 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 198 (585)
|+|++. ..+..+++|+.|++++|.++...
T Consensus 160 N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 160 NEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp SCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 999976 67888999999999999998653
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.9e-19 Score=171.48 Aligned_cols=156 Identities=24% Similarity=0.280 Sum_probs=127.2
Q ss_pred ccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCC
Q 047705 136 LITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGS 215 (585)
Q Consensus 136 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 215 (585)
.+.++.+++.++.++. .+ .++|++|+|++|+|+++.|..|..+++|++|+|++|.|+...+..
T Consensus 21 ~~~v~c~~~~l~~ip~-~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~-------------- 83 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPA-GI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGV-------------- 83 (229)
T ss_dssp TTEEECTTSCCSSCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------
T ss_pred CCEeEccCCCcCccCC-CC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhh--------------
Confidence 5678888888874443 22 267888888888888777888888888888888888887544333
Q ss_pred CCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhh
Q 047705 216 NDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASL 295 (585)
Q Consensus 216 n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 295 (585)
+..+++|+.|+|++|+++++.+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..+
T Consensus 84 -------~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~ 155 (229)
T 3e6j_A 84 -------FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAF 155 (229)
T ss_dssp -------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTT
T ss_pred -------cccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHH
Confidence 445667777888888898887888899999999999999998 568888999999999999999998777788
Q ss_pred ccCCccceEEeecCcCeeeCC
Q 047705 296 EKLSYLEDLNLSFNKLEGEIP 316 (585)
Q Consensus 296 ~~l~~L~~l~l~~N~l~~~~~ 316 (585)
..+++|+.|++++|+|.|.|+
T Consensus 156 ~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 156 DRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTCTTCCEEECTTSCBCTTBG
T ss_pred hCCCCCCEEEeeCCCccCCcc
Confidence 899999999999999998886
No 366
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=1.6e-20 Score=182.18 Aligned_cols=138 Identities=21% Similarity=0.271 Sum_probs=107.2
Q ss_pred CCccceecccCceEEEEEEe-CCCcE--EEEEEEechhh------------------------hhHHHHHHHHHHHHhcC
Q 047705 416 FSENNLIGRGGFGSVYKARL-GDGME--VAVKVFNLQCR------------------------RAFKSFDVECEIMKSIR 468 (585)
Q Consensus 416 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l~ 468 (585)
|++.+.||+|+||.||+|.+ .+|+. ||||+++.... .....+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999987 68888 99998754311 11236788999999998
Q ss_pred CCcc--eeEEeeeecCCeEEEEEEccCC-C----CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCC
Q 047705 469 HRNL--IKVISSCSNEEFKGLVLEYMPQ-G----SLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLK 541 (585)
Q Consensus 469 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlk 541 (585)
|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|+.|||. .++|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8754 444443 356899999942 3 66665432 2234567899999999999994 4799999999
Q ss_pred CCCEEeCCCCcEEEeeeccccccc
Q 047705 542 PSNVLLDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 542 p~NIll~~~~~~kl~Dfg~a~~~~ 565 (585)
|+|||+++ .++|+|||+|....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999998653
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1e-18 Score=166.31 Aligned_cols=154 Identities=20% Similarity=0.193 Sum_probs=101.6
Q ss_pred CCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
-+.++.+++.++..+... .++|++|+|++|+|+.++. ..|..+++|++|+|++|+|..+.+. .+..++. |++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~----~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~-~~~~l~~-L~~L 93 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGI----PTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVG-VFDSLTQ-LTVL 93 (229)
T ss_dssp TTEEECTTSCCSSCCSCC----CTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTT-TTTTCTT-CCEE
T ss_pred CCEeEccCCCcCccCCCC----CCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChh-hcccCCC-cCEE
Confidence 455666666665333222 2566666666666666644 5566666666666666666544333 3444544 6666
Q ss_pred EeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccc
Q 047705 116 QMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLS 195 (585)
Q Consensus 116 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (585)
+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 66666666555566777788888888888887 45666777888888888888888766667777888888888888776
Q ss_pred cc
Q 047705 196 RS 197 (585)
Q Consensus 196 ~~ 197 (585)
..
T Consensus 173 c~ 174 (229)
T 3e6j_A 173 CE 174 (229)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=3.1e-19 Score=165.81 Aligned_cols=151 Identities=19% Similarity=0.243 Sum_probs=73.5
Q ss_pred cCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccc
Q 047705 31 FNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSH 110 (585)
Q Consensus 31 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 110 (585)
..+++|++|++++|.|+ .++. ...+++|++|++++|.++.++ .+..+++|++|++++|+++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~l~~n~~~~~~---~l~~l~~L~~L~l~~n~l~------------- 101 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLTG--IEYAHNIKDLTINNIHATNYN---PISGLSNLERLRIMGKDVT------------- 101 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCTT--GGGCTTCSEEEEESCCCSCCG---GGTTCTTCCEEEEECTTCB-------------
T ss_pred hhcCCccEEeccCCCcc-ChHH--HhcCCCCCEEEccCCCCCcch---hhhcCCCCCEEEeECCccC-------------
Confidence 34445555555555554 2222 223455555555555444432 3444555555555555554
Q ss_pred cccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCC-CCccCcccccCCCCCcEEEc
Q 047705 111 SLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNK-LEGSIPDDICRLVELYKLEL 189 (585)
Q Consensus 111 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L 189 (585)
+..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+ ++ .+| .+..+++|++|++
T Consensus 102 -------------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l 166 (197)
T 4ezg_A 102 -------------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNI 166 (197)
T ss_dssp -------------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEEC
T ss_pred -------------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEEC
Confidence 3344444455555555555555554444555555555555555554 43 222 3455555555555
Q ss_pred CCCcccccCcccccCcccchhhcCCCCC
Q 047705 190 GGNKLSRSIPACFNNLIALRILSLGSND 217 (585)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (585)
++|.+++ ++ .+..+++|+.|++++|+
T Consensus 167 ~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 167 QFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp TTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred CCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555543 22 34455555555555553
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=2.7e-20 Score=187.71 Aligned_cols=86 Identities=21% Similarity=0.135 Sum_probs=40.0
Q ss_pred CCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCC-EEeCCCCccCccCChhhccCCccceE
Q 047705 226 LKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLK-FLNLSNNNLSGAIPASLEKLSYLEDL 304 (585)
Q Consensus 226 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~l 304 (585)
+++|+.|++++|+++.+.+.+|.++++|+.|+|++| ++.+.+.+|.++++|+ .+++.+ +++.+.+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344444444444444444444444444444444444 4434444444444444 444444 4443444444444444444
Q ss_pred EeecCcCee
Q 047705 305 NLSFNKLEG 313 (585)
Q Consensus 305 ~l~~N~l~~ 313 (585)
++++|.++.
T Consensus 303 ~l~~n~i~~ 311 (329)
T 3sb4_A 303 LATGDKITT 311 (329)
T ss_dssp EECSSCCCE
T ss_pred EeCCCccCc
Confidence 444444443
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.8e-19 Score=175.30 Aligned_cols=168 Identities=21% Similarity=0.280 Sum_probs=125.8
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 191 (585)
+..+++++|.+++.. .+..+++|++|++++|.++.+. .+..+++|++|+|++|+|++..+ +..+++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 566667777766443 4666777777777777776432 56677777777777777775444 66777777777777
Q ss_pred CcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccc
Q 047705 192 NKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSF 271 (585)
Q Consensus 192 N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 271 (585)
|++++. +. +.. ++|+.|++++|.+++. ..+..+++|+.|++++|++++. + .+
T Consensus 95 N~l~~l-~~----------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l 146 (263)
T 1xeu_A 95 NRLKNL-NG----------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-ML 146 (263)
T ss_dssp SCCSCC-TT----------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GG
T ss_pred CccCCc-Cc----------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HH
Confidence 777642 11 112 6788888899999864 3588999999999999999875 3 68
Q ss_pred cCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeC
Q 047705 272 GNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEI 315 (585)
Q Consensus 272 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 315 (585)
..+++|+.|++++|++++. ..+..+++|+.|++++|++++..
T Consensus 147 ~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 147 GFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp GGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred ccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 8899999999999999976 67888999999999999998653
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.8e-19 Score=166.58 Aligned_cols=175 Identities=26% Similarity=0.311 Sum_probs=92.2
Q ss_pred cEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcc-cccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCC
Q 047705 137 ITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPD-DICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGS 215 (585)
Q Consensus 137 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 215 (585)
+++++++|.++.+ |..+.. +|++|+|++|+|+++.+. .|..+++|++|+|++|.|++..|..
T Consensus 11 ~~l~~s~~~l~~i-p~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------- 73 (192)
T 1w8a_A 11 TTVDCTGRGLKEI-PRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNA-------------- 73 (192)
T ss_dssp TEEECTTSCCSSC-CSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTT--------------
T ss_pred CEEEcCCCCcCcC-ccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhH--------------
Confidence 4566666666533 222221 566666666666654443 3555666666666666665443332
Q ss_pred CCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCCh-h
Q 047705 216 NDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPA-S 294 (585)
Q Consensus 216 n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~ 294 (585)
+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|++++..+. +
T Consensus 74 -------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~ 146 (192)
T 1w8a_A 74 -------FEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146 (192)
T ss_dssp -------TTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH
T ss_pred -------cCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH
Confidence 33344455555566666666666666666666666666666666666666666666666666666644331 1
Q ss_pred hccCCccceEEeecCcCeeeCCCCCCCCCCCccccCCCCcccCCC
Q 047705 295 LEKLSYLEDLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 339 (585)
Q Consensus 295 ~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 339 (585)
+. ..++...+.++...|..|. .+.......+..+.+.|..+
T Consensus 147 ~~--~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 147 FA--EWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp HH--HHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC
T ss_pred HH--HHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCC
Confidence 11 1122223344444444443 22333333444555555543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=4.2e-19 Score=164.93 Aligned_cols=156 Identities=20% Similarity=0.265 Sum_probs=116.1
Q ss_pred cccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCC
Q 047705 5 EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCK 84 (585)
Q Consensus 5 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 84 (585)
+.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++. +..+++|++|+|++|+++.... ..|..++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~~--l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~ 112 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYNP--ISGLSNLERLRIMGKDVTSDKI-PNLSGLT 112 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCGG--GTTCTTCCEEEEECTTCBGGGS-CCCTTCT
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cchh--hhcCCCCCEEEeECCccCcccC-hhhcCCC
Confidence 3467789999999999998 455 7999999999999999887 4443 4479999999999999997443 6789999
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCc-cccccchhhhCCCCCceE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNK-LNGSILITLSKLQKLQGL 163 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 163 (585)
+|++|+|++|++++..+. .+..+++|++|++++|. ++.+ + .+..+++|++|
T Consensus 113 ~L~~L~Ls~n~i~~~~~~--------------------------~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L 164 (197)
T 4ezg_A 113 SLTLLDISHSAHDDSILT--------------------------KINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSL 164 (197)
T ss_dssp TCCEEECCSSBCBGGGHH--------------------------HHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEE
T ss_pred CCCEEEecCCccCcHhHH--------------------------HHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEE
Confidence 999999999998754332 34556677777777776 5433 3 56677777777
Q ss_pred EccCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 164 VLDDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
++++|++++. + .+..+++|++|++++|++.+
T Consensus 165 ~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 165 NIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp ECTTBCCCCC-T-TGGGCSSCCEEEECBC----
T ss_pred ECCCCCCcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 7777777743 2 56677777777777777653
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=5.7e-20 Score=204.05 Aligned_cols=222 Identities=23% Similarity=0.231 Sum_probs=109.3
Q ss_pred CCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCcc
Q 047705 58 LPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLI 137 (585)
Q Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 137 (585)
.+.++.|+|.+|.+...+. ..|+.++|+.|.|.+ +++..|.+. ..+..|..++.|+
T Consensus 172 ~~~~~~l~L~~n~~~~~~~-------~~l~~l~Ls~~~i~~----------------~~~~~n~~~-~~~~~~~~l~~L~ 227 (727)
T 4b8c_D 172 TPLTPKIELFANGKDEANQ-------ALLQHKKLSQYSIDE----------------DDDIENRMV-MPKDSKYDDQLWH 227 (727)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred CCccceEEeeCCCCCcchh-------hHhhcCccCcccccC----------------cccccccee-cChhhhccCCCCc
Confidence 3456777777777666542 334555666665542 233344444 5567788888888
Q ss_pred EEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC
Q 047705 138 TIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND 217 (585)
Q Consensus 138 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (585)
.|+|++|.+.. ++..+.++++|++|+|++|.|+ .+|..|..+++|++|+|++|.|+ .+|..|..+++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 88888888884 4444558888888888888888 67778888888888888888888 667778888888888888886
Q ss_pred --CCCccCCCCCCCcEEEccCCcccccCCcccCCCCC-CcEEeecccCcccccCccccCcCCCCEEeCCCC--------c
Q 047705 218 --PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKN-LEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNN--------N 286 (585)
Q Consensus 218 --~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N--------~ 286 (585)
.+|..+..+++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .
T Consensus 305 l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~ 378 (727)
T 4b8c_D 305 VTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDS 378 (727)
T ss_dssp CCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------------------
T ss_pred CCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCC
Confidence 66777888888888888999988887777654322 234778888888777654 455666666 3
Q ss_pred cCccCChhhccCCccceEEeecCcCe
Q 047705 287 LSGAIPASLEKLSYLEDLNLSFNKLE 312 (585)
Q Consensus 287 l~~~~~~~~~~l~~L~~l~l~~N~l~ 312 (585)
+.+..+..+..+..+....+++|-+.
T Consensus 379 l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 379 LQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -----------------------CCC
T ss_pred ccccccchhhcccccceeeeeccccc
Confidence 44444445555666666777777765
No 374
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=2.9e-17 Score=169.20 Aligned_cols=272 Identities=14% Similarity=0.151 Sum_probs=187.1
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCc
Q 047705 8 NLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLT 87 (585)
Q Consensus 8 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 87 (585)
....++.+.+-.+ ++.+...+|.+. +|+.+.|..+ ++ .+....|.. .+|++++|.. .++.++. .+|..+++|+
T Consensus 111 ~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~-~aF~~c~~L~ 183 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKE-DIFYYCYNLK 183 (401)
T ss_dssp ECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECS-STTTTCTTCC
T ss_pred ecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehH-HHhhCcccCC
Confidence 3466677777554 555667777764 7888887666 65 444444444 4688888875 7777776 7788888888
Q ss_pred EEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccC
Q 047705 88 VIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDD 167 (585)
Q Consensus 88 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 167 (585)
.++|++|+++.+.... |. .. .|+.+.+.. +++.+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+ .
T Consensus 184 ~l~l~~n~l~~I~~~a-F~-~~-~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p 256 (401)
T 4fdw_A 184 KADLSKTKITKLPAST-FV-YA-GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-P 256 (401)
T ss_dssp EEECTTSCCSEECTTT-TT-TC-CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-E
T ss_pred eeecCCCcceEechhh-Ee-ec-ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-C
Confidence 8888888887665553 33 23 377777763 466677777777777777777764 55566677777 67777777 4
Q ss_pred CCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCccc
Q 047705 168 NKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEI 247 (585)
Q Consensus 168 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 247 (585)
|.++.+...+|..+++|+++++.+|.+...... ...+..|.++++|+.+++. +.++.+...+|
T Consensus 257 ~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~----------------~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF 319 (401)
T 4fdw_A 257 NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEA----------------MIHPYCLEGCPKLARFEIP-ESIRILGQGLL 319 (401)
T ss_dssp TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTC----------------EECTTTTTTCTTCCEECCC-TTCCEECTTTT
T ss_pred CCccEEChhHhhCCCCCCEEEeCCccccCCccc----------------EECHHHhhCCccCCeEEeC-CceEEEhhhhh
Confidence 556656667777777777777777666410000 0122345566667777776 44776777888
Q ss_pred CCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCC-ccceEEeecCcCe
Q 047705 248 GGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLS-YLEDLNLSFNKLE 312 (585)
Q Consensus 248 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~ 312 (585)
.++.+|+.+.|..| ++.+.+.+|.++ +|+.+++++|.+....+..|..++ .++.|++..|.+.
T Consensus 320 ~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 320 GGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 88888888888655 666777888888 888888888888877777777774 6788888877654
No 375
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=2.2e-21 Score=208.87 Aligned_cols=209 Identities=22% Similarity=0.191 Sum_probs=124.4
Q ss_pred CCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCc
Q 047705 57 RLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNL 136 (585)
Q Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 136 (585)
..++|+.|+|++|+++.+| ..+..+++|+.|++++|... ..++..+ ..++..+.+|..++.+++|
T Consensus 347 ~~~~L~~L~Ls~n~L~~Lp--~~i~~l~~L~~L~l~~n~~l--------~~l~~ll-----~~~~~~~~~~~~l~~l~~L 411 (567)
T 1dce_A 347 TDEQLFRCELSVEKSTVLQ--SELESCKELQELEPENKWCL--------LTIILLM-----RALDPLLYEKETLQYFSTL 411 (567)
T ss_dssp TTTTSSSCCCCHHHHHHHH--HHHHHHHHHHHHCTTCHHHH--------HHHHHHH-----HHHCTGGGHHHHHHHHHHH
T ss_pred cCccceeccCChhhHHhhH--HHHHHHHHHHHhccccchhh--------hhHHHHH-----HhcccccCCHHHHHHHHhc
Confidence 4556666666666666665 45666666666666554310 0000000 0112344555566666666
Q ss_pred cEEE-eeCCccccccchhh-----hC--CCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccc
Q 047705 137 ITID-LGGNKLNGSILITL-----SK--LQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIAL 208 (585)
Q Consensus 137 ~~L~-L~~N~l~~~~~~~~-----~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 208 (585)
+.|+ ++.|.+.......+ .. ...|+.|+|++|+|++ +|. +..+++|+.|+|++|.|+ .
T Consensus 412 ~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~----------- 477 (567)
T 1dce_A 412 KAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-A----------- 477 (567)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-C-----------
T ss_pred ccCcchhhcccchhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-c-----------
Confidence 6666 45444331111000 00 0135555555555553 333 555555555555555555 3
Q ss_pred hhhcCCCCCCCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCccccc-CccccCcCCCCEEeCCCCcc
Q 047705 209 RILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLI-PDSFGNLISLKFLNLSNNNL 287 (585)
Q Consensus 209 ~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l 287 (585)
+|..++.+++|+.|+|++|.+++ +| .|+++++|+.|+|++|++++.. |..+..+++|+.|+|++|++
T Consensus 478 ----------lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 478 ----------LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp ----------CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred ----------cchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 34455666777777888888886 45 7888899999999999998876 88888899999999999998
Q ss_pred CccCCh---hhccCCccceEEe
Q 047705 288 SGAIPA---SLEKLSYLEDLNL 306 (585)
Q Consensus 288 ~~~~~~---~~~~l~~L~~l~l 306 (585)
++..|. .+..+++|+.||+
T Consensus 546 ~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 546 CQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCccHHHHHHHHCcccCccCC
Confidence 876553 2344788888864
No 376
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=2.1e-21 Score=209.11 Aligned_cols=185 Identities=23% Similarity=0.193 Sum_probs=138.2
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCc-------------cccccchhhhCCCCCceEE-ccCCCCCccCccc
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNK-------------LNGSILITLSKLQKLQGLV-LDDNKLEGSIPDD 177 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~~~~~ 177 (585)
|+.|+|++|.++ .+|..++.+++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+.
T Consensus 351 L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~------ 423 (567)
T 1dce_A 351 LFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD------ 423 (567)
T ss_dssp SSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH------
T ss_pred ceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc------
Confidence 556666666665 445566666666666665553 4556777888888888888 6666443
Q ss_pred ccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCCcE
Q 047705 178 ICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEY 255 (585)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 255 (585)
+|+.+.+++|.++...+ ..|+.|+|++|. .+|. +..+++|+.|+|++|.++ .+|..|+++++|+.
T Consensus 424 -----~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 490 (567)
T 1dce_A 424 -----DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEV 490 (567)
T ss_dssp -----HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred -----hhhhhhhhcccccccCc------cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCE
Confidence 23333444444443221 135556666665 3343 777888999999999999 67889999999999
Q ss_pred EeecccCcccccCccccCcCCCCEEeCCCCccCccC-ChhhccCCccceEEeecCcCeeeCCCC
Q 047705 256 LFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAI-PASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 256 L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
|+|++|++++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|..
T Consensus 491 L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 491 LQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp EECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred EECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 9999999997 56 8999999999999999999887 999999999999999999999887753
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.3e-18 Score=175.39 Aligned_cols=283 Identities=15% Similarity=0.144 Sum_probs=185.7
Q ss_pred CCCCCEEecCCCcccccCCccccC-CCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccC-----
Q 047705 9 LQNLEELDLRQNKLIGTVPVAIFN-VSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSN----- 82 (585)
Q Consensus 9 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~----- 82 (585)
+.+++.|+++++ +.......+.. +++|++|||++|+|. .... ....++.+..+.+..|. +|. .+|..
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~-~~~~~~~~~~~~~~~~~---I~~-~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIK-MYSG-KAGTYPNGKFYIYMANF---VPA-YAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEEC-CEEE-SSSSSGGGCCEEECTTE---ECT-TTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeE-EecC-ccccccccccccccccc---cCH-HHhccccccc
Confidence 567899999875 22222334444 788999999999987 1111 11233445666666663 454 67888
Q ss_pred ---CCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCc----cccccchhhh
Q 047705 83 ---CKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNK----LNGSILITLS 155 (585)
Q Consensus 83 ---l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~ 155 (585)
+++|+.|+|.+ +++.+.+. +|.++++ |+.|++.+|.++.+.+.+|.++.++..+.+..+. ...+...+|.
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~-aF~~~~~-L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~ 173 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDA-AFKGCDN-LKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFI 173 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTT-TTTTCTT-CCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEE
T ss_pred ccccCCCcEEECCc-cccchhHH-HhhcCcc-cceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccc
Confidence 88888888888 77766555 6777776 8888888888888888888888777777666532 2334455666
Q ss_pred CCCCCc-eEEccCCCCCccCcccc----cCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC---CCCccCCCCC
Q 047705 156 KLQKLQ-GLVLDDNKLEGSIPDDI----CRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND---PLPLEIGNLK 227 (585)
Q Consensus 156 ~l~~L~-~L~L~~N~l~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~l~ 227 (585)
++..|+ .+.+.... .++..+ ....++..+.+.++-...........+++|+.|++++|+ +.+..|.++.
T Consensus 174 ~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~ 250 (329)
T 3sb4_A 174 EGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKK 250 (329)
T ss_dssp ESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCT
T ss_pred cccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCC
Confidence 777777 45554322 112111 123344555554442221111111224556666666554 2223466677
Q ss_pred CCcEEEccCCcccccCCcccCCCCCCc-EEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEe
Q 047705 228 VLVGIDFSMNNFSGIIPKEIGGLKNLE-YLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNL 306 (585)
Q Consensus 228 ~L~~L~ls~N~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 306 (585)
+|+.|++++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.+|++|+.+++++|+++.+.+.+|.++++|+.++.
T Consensus 251 ~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 251 YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 7777778777 7777888888888888 888887 777777788888888998888888888777788888888888763
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=5.6e-18 Score=156.52 Aligned_cols=113 Identities=25% Similarity=0.348 Sum_probs=75.0
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV 164 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 164 (585)
+|++|+|++|+|+++.+...++.++. |++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPH-LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTT-CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccCCccccccCCC-CCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 44444444444443333222333433 44444444444445556677778888888888888877777788888888888
Q ss_pred ccCCCCCccCcccccCCCCCcEEEcCCCcccccC
Q 047705 165 LDDNKLEGSIPDDICRLVELYKLELGGNKLSRSI 198 (585)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 198 (585)
|++|+|++..|..|..+++|++|+|++|.+.+..
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 8888888777888888888888888888887543
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=5.4e-17 Score=167.19 Aligned_cols=242 Identities=13% Similarity=0.115 Sum_probs=183.9
Q ss_pred CCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCcc
Q 047705 58 LPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLI 137 (585)
Q Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 137 (585)
...++++.+.+ .++.++. .+|... +|+.+.|..| ++.+... +|.+. +|+.+.+.. +++.+.+.+|.++++|+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~-~aF~~~-~L~~i~l~~~-i~~I~~~-aF~~~--~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPK-DAFRNS-QIAKVVLNEG-LKSIGDM-AFFNS--TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp CSSCSEEECCT-TCCEECT-TTTTTC-CCSEEECCTT-CCEECTT-TTTTC--CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred cCCccEEEECC-ccCEehH-hhcccC-CccEEEeCCC-ccEECHH-hcCCC--CceEEEeCC-CccEehHHHhhCcccCC
Confidence 35666666653 5666765 667764 6777777666 6555555 34432 377777775 67767777888888888
Q ss_pred EEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC
Q 047705 138 TIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND 217 (585)
Q Consensus 138 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (585)
.++|++|.++.+...+|. ..+|+++.|..+ ++.+...+|.++++|+.+++..| ++.....+|.+ .+|+.+.+.++-
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~i 259 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNGV 259 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETTC
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCCc
Confidence 888888888877777777 478888888744 77677778888888888888775 55455667777 678888885543
Q ss_pred --CCCccCCCCCCCcEEEccCCccc-----ccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCcc
Q 047705 218 --PLPLEIGNLKVLVGIDFSMNNFS-----GIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGA 290 (585)
Q Consensus 218 --~~~~~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 290 (585)
.....|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.|. +.++.+...+|.+|++|+.+.+..| ++.+
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 44556888888999988887765 5778899999999999999 5588788899999999999999655 7878
Q ss_pred CChhhccCCccceEEeecCcCeee
Q 047705 291 IPASLEKLSYLEDLNLSFNKLEGE 314 (585)
Q Consensus 291 ~~~~~~~l~~L~~l~l~~N~l~~~ 314 (585)
.+.+|.++ +|+.+++++|.+...
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~~~l 360 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTPPQV 360 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSCCBC
T ss_pred cHHhCCCC-CCCEEEEcCCCCccc
Confidence 88899999 999999999987643
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.7e-18 Score=160.02 Aligned_cols=155 Identities=28% Similarity=0.376 Sum_probs=119.7
Q ss_pred ceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEEEccCCccc
Q 047705 161 QGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFS 240 (585)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~ 240 (585)
+.+++++|.|+ .+|..+. ++|++|+|++|.|+ .+|. .+..+++|+.|+|++|.++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~---------------------~~~~l~~L~~L~Ls~N~i~ 67 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPK---------------------ELSNYKHLTLIDLSNNRIS 67 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCG---------------------GGGGCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHH---------------------HhhcccCCCEEECCCCcCC
Confidence 56888888888 4454432 57888888888887 3444 3455667788888999999
Q ss_pred ccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCCCC
Q 047705 241 GIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRGGS 320 (585)
Q Consensus 241 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 320 (585)
++.+..|.++++|++|+|++|+++++.|..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|+|.|+|...+.
T Consensus 68 ~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l 147 (193)
T 2wfh_A 68 TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWL 147 (193)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHH
Confidence 88888999999999999999999998888999999999999999999987777899999999999999999998875432
Q ss_pred CCCCCccccCCCCcccCCCC
Q 047705 321 FGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 321 ~~~~~~~~~~~n~~~c~~~~ 340 (585)
...+.......+...|..|.
T Consensus 148 ~~~~~~~~~~~~~~~C~~P~ 167 (193)
T 2wfh_A 148 SDWVKSEYKEPGIARCAGPG 167 (193)
T ss_dssp HHHHHHSSCCCSCCBEEESG
T ss_pred HHHHHhccCCCCCcCcCCch
Confidence 22222222223445676653
No 381
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.72 E-value=2.1e-18 Score=173.60 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=101.2
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEEechhh--------------hh--------HHHHHHHHHHHHhcCCCc
Q 047705 414 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCR--------------RA--------FKSFDVECEIMKSIRHRN 471 (585)
Q Consensus 414 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~--------~~~~~~E~~~l~~l~h~n 471 (585)
.=|++.+.||+|+||.||+|...+|+.||||+++.... .. ......|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34999999999999999999988999999998753210 00 011234666777775444
Q ss_pred c--eeEEeeeecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCC
Q 047705 472 L--IKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDD 549 (585)
Q Consensus 472 i--v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~ 549 (585)
+ ...++. ...++||||++|+++.++... .....++.|++.++.||| ++|||||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeC
Confidence 3 222322 123799999999888765422 123568899999999999 899999999999999987
Q ss_pred CC----------cEEEeeecccccc
Q 047705 550 NM----------IAYLSDFGIAKLL 564 (585)
Q Consensus 550 ~~----------~~kl~Dfg~a~~~ 564 (585)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 66 3899999987653
No 382
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=2.4e-18 Score=191.01 Aligned_cols=215 Identities=18% Similarity=0.168 Sum_probs=112.9
Q ss_pred CCCCEEecCCCcccccCCccccCCCCCCEE-----ecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCC
Q 047705 10 QNLEELDLRQNKLIGTVPVAIFNVSTLKLL-----GLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCK 84 (585)
Q Consensus 10 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L-----~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 84 (585)
++++.|+|.+|.+.. .+..+.....|..+ +++.|.+. .+...+..++.|++|+|++|.+..+| ..+..++
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~--~~~~~~~~l~~L~~L~Ls~n~l~~l~--~~~~~l~ 247 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV--MPKDSKYDDQLWHALDLSNLQIFNIS--ANIFKYD 247 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCSCCC--GGGGGCC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee--cChhhhccCCCCcEEECCCCCCCCCC--hhhcCCC
Confidence 567888888888774 34333333233332 22333333 22334457888999999999998887 3455888
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV 164 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 164 (585)
+|++|+|++|.|+ .+|. .+++++. |++|+|++|.++ .+|..|+.|++|++|+|++|.|+ .+|..|.++++|++|+
T Consensus 248 ~L~~L~Ls~N~l~-~lp~-~~~~l~~-L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 248 FLTRLYLNGNSLT-ELPA-EIKNLSN-LRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp SCSCCBCTTSCCS-CCCG-GGGGGTT-CCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCEEEeeCCcCc-ccCh-hhhCCCC-CCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 9999999999988 5555 5677776 999999999988 66888889999999999999987 4566688999999999
Q ss_pred ccCCCCCccCcccccCCCC-CcEEEcCCCcccccCcccccCcccchhhcCCCCC-----------CCCccCCCCCCCcEE
Q 047705 165 LDDNKLEGSIPDDICRLVE-LYKLELGGNKLSRSIPACFNNLIALRILSLGSND-----------PLPLEIGNLKVLVGI 232 (585)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~-----------~~~~~~~~l~~L~~L 232 (585)
|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|+.|++++|. ..+..+..+..+...
T Consensus 323 L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~ 396 (727)
T 4b8c_D 323 VEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFT 396 (727)
T ss_dssp CTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------------
T ss_pred CCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhccccccee
Confidence 9999999888877755422 23477888998877776 45556666662 112223344455556
Q ss_pred EccCCccc
Q 047705 233 DFSMNNFS 240 (585)
Q Consensus 233 ~ls~N~l~ 240 (585)
.++.|-+.
T Consensus 397 ~ls~Nil~ 404 (727)
T 4b8c_D 397 VLSYNTLC 404 (727)
T ss_dssp -----CCC
T ss_pred eeeccccc
Confidence 66677654
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.6e-17 Score=146.97 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=15.2
Q ss_pred CCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCc
Q 047705 58 LPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLD 97 (585)
Q Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 97 (585)
+++|++|+|++|.++.+ ..+..+++|++|+|++|+++
T Consensus 48 l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~N~l~ 84 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV---SNLPKLPKLKKLELSENRIF 84 (168)
T ss_dssp GGGCCEEEEESSCCCCC---SSCCCCSSCCEEEEESCCCC
T ss_pred CCCCCEEeCcCCCCCCh---hhhccCCCCCEEECcCCcCc
Confidence 34444444444444433 22334444444444444443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.7e-16 Score=145.24 Aligned_cols=128 Identities=30% Similarity=0.322 Sum_probs=88.3
Q ss_pred CEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEE
Q 047705 37 KLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQ 116 (585)
Q Consensus 37 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 116 (585)
+++++++|.|+. +|... .++|++|+|++|+|+.+| ..|..+++|++|+|++|+|++
T Consensus 13 ~~l~~~~~~l~~-ip~~~---~~~l~~L~L~~n~i~~ip--~~~~~l~~L~~L~Ls~N~i~~------------------ 68 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI---PRDVTELYLDGNQFTLVP--KELSNYKHLTLIDLSNNRIST------------------ 68 (193)
T ss_dssp TEEECTTSCCSS-CCSCC---CTTCCEEECCSSCCCSCC--GGGGGCTTCCEEECCSSCCCC------------------
T ss_pred CEEEcCCCCCCc-CCCCC---CCCCCEEECCCCcCchhH--HHhhcccCCCEEECCCCcCCE------------------
Confidence 456666666653 22221 245666666666666655 456666666666666666553
Q ss_pred eecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccc
Q 047705 117 MHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSR 196 (585)
Q Consensus 117 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (585)
..+..|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|.+..
T Consensus 69 --------i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 69 --------LSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp --------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred --------eCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 334456777888888888888887777788888888888888888887666678888888888888888863
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.7e-16 Score=141.88 Aligned_cols=129 Identities=22% Similarity=0.249 Sum_probs=75.6
Q ss_pred CCCccEEEccCCCCC--CCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCC
Q 047705 58 LPNLEELVLWGNNFS--ELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTN 135 (585)
Q Consensus 58 l~~L~~L~L~~n~l~--~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 135 (585)
.++|++|+|++|+++ .+| ..+..+++|++|+|++|.++++ ..+..+++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~--~~~~~l~~L~~L~l~~n~l~~~----------------------------~~~~~l~~ 72 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIE--GLTAEFVNLEFLSLINVGLISV----------------------------SNLPKLPK 72 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCS--SCCGGGGGCCEEEEESSCCCCC----------------------------SSCCCCSS
T ss_pred cccCCEEECCCCCCChhhHH--HHHHhCCCCCEEeCcCCCCCCh----------------------------hhhccCCC
Confidence 456666666666666 454 3355566666666666665533 33555666
Q ss_pred ccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCc-ccccCCCCCcEEEcCCCcccccCc---ccccCcccchhh
Q 047705 136 LITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIP-DDICRLVELYKLELGGNKLSRSIP---ACFNNLIALRIL 211 (585)
Q Consensus 136 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L 211 (585)
|++|+|++|++.+..|..+..+++|++|+|++|+|++..+ ..+..+++|++|++++|.+++..+ ..+..+++|++|
T Consensus 73 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 73 LKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp CCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred CCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 6666666666665556666666666666666666664322 556666666666666666664433 244444444444
Q ss_pred cCCCC
Q 047705 212 SLGSN 216 (585)
Q Consensus 212 ~l~~n 216 (585)
++++|
T Consensus 153 ~l~~n 157 (168)
T 2ell_A 153 DGYDR 157 (168)
T ss_dssp TTEET
T ss_pred cCCCC
Confidence 44443
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4.6e-16 Score=141.67 Aligned_cols=133 Identities=25% Similarity=0.242 Sum_probs=94.0
Q ss_pred CCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEE
Q 047705 36 LKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDF 115 (585)
Q Consensus 36 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 115 (585)
.+.+++++|.++..+.. ..++|++|++++|+++.++. ..|..+++|++|+|++|+++++
T Consensus 9 ~~~l~~~~~~l~~~p~~----~~~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~---------------- 67 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTG----IPSSATRLELESNKLQSLPH-GVFDKLTQLTKLSLSQNQIQSL---------------- 67 (177)
T ss_dssp TTEEECCSSCCSSCCTT----CCTTCSEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCCC----------------
T ss_pred CCEEEecCCCCccCCCC----CCCCCcEEEeCCCcccEeCH-HHhcCcccccEEECCCCcceEe----------------
Confidence 45677777777633322 13567777777777776664 5566667777777777766533
Q ss_pred EeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCccc
Q 047705 116 QMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLS 195 (585)
Q Consensus 116 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (585)
.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+..+..+++|++|+|++|.+.
T Consensus 68 ----------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 68 ----------PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp ----------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ----------ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 3344667788888888888888777777888888888888888888766666777888888888888887
Q ss_pred ccCc
Q 047705 196 RSIP 199 (585)
Q Consensus 196 ~~~~ 199 (585)
+..+
T Consensus 138 ~~~~ 141 (177)
T 2o6r_A 138 CSCP 141 (177)
T ss_dssp CCHH
T ss_pred ccCc
Confidence 5443
No 387
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.65 E-value=3.6e-15 Score=153.94 Aligned_cols=290 Identities=14% Similarity=0.092 Sum_probs=172.3
Q ss_pred cccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCC
Q 047705 5 EIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCK 84 (585)
Q Consensus 5 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 84 (585)
+|.+..+|+.++|..+ ++.+...+|.++++|+.++|..+ ++ .+....|...++|+.+.+..+ +..++. .+|....
T Consensus 66 AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~-~aF~~~~ 140 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGV-EAFKGCD 140 (394)
T ss_dssp TTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECT-TTTTTCC
T ss_pred HhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecc-eeeeccc
Confidence 4677788888888644 66677778888888888888654 54 455555666667766665432 333332 3343333
Q ss_pred CCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEE
Q 047705 85 SLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLV 164 (585)
Q Consensus 85 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 164 (585)
.+........ ..+.. .+|.++.. |+.+.+..+ +..+...+|.++++|+.+++..| +..+...+|.++..|+.+.
T Consensus 141 ~~~~~~~~~~--~~i~~-~aF~~c~~-L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 141 FKEITIPEGV--TVIGD-EAFATCES-LEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CSEEECCTTC--CEECT-TTTTTCTT-CCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccCccc--cccch-hhhcccCC-CcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 2222222111 11111 13333333 555555432 23344445555555555555443 3334444455555554444
Q ss_pred ccCCC---------------------CCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccC
Q 047705 165 LDDNK---------------------LEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEI 223 (585)
Q Consensus 165 L~~N~---------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 223 (585)
+..+. ++.+....|..+.+|+.+.+..+... .....|..+..++.+....+......+
T Consensus 215 ~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F 293 (394)
T 4fs7_A 215 FPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTF 293 (394)
T ss_dssp CCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTT
T ss_pred cCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccc
Confidence 44332 22234445566666666666665443 445566666666666655544444456
Q ss_pred CCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccce
Q 047705 224 GNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLED 303 (585)
Q Consensus 224 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 303 (585)
..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+...+|.++.+|+.
T Consensus 294 ~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 294 YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 67778888877654 66667777888888888888654 66666778888888888888766 66666778888888888
Q ss_pred EEeecC
Q 047705 304 LNLSFN 309 (585)
Q Consensus 304 l~l~~N 309 (585)
+++..+
T Consensus 371 i~lp~~ 376 (394)
T 4fs7_A 371 VELPKR 376 (394)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 888655
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.2e-16 Score=141.11 Aligned_cols=84 Identities=23% Similarity=0.273 Sum_probs=40.7
Q ss_pred cCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCcc-CcccccCCCCCcEEEcCCCcccccCc---ccccCcc
Q 047705 131 GNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGS-IPDDICRLVELYKLELGGNKLSRSIP---ACFNNLI 206 (585)
Q Consensus 131 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~ 206 (585)
..+++|++|+|++|.+.+..|..+..+++|++|++++|++++. .+..+..+++|++|++++|.+++..+ ..+..++
T Consensus 61 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 140 (149)
T 2je0_A 61 PKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLP 140 (149)
T ss_dssp CCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCT
T ss_pred hcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCC
Confidence 3344455555555555444444444455555555555555432 12444555555555555555554333 2445555
Q ss_pred cchhhcCC
Q 047705 207 ALRILSLG 214 (585)
Q Consensus 207 ~L~~L~l~ 214 (585)
+|+.|+++
T Consensus 141 ~L~~L~l~ 148 (149)
T 2je0_A 141 QLTYLDGY 148 (149)
T ss_dssp TCCEETTB
T ss_pred CcccccCC
Confidence 55555543
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=9.1e-16 Score=139.66 Aligned_cols=133 Identities=25% Similarity=0.245 Sum_probs=99.3
Q ss_pred CCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEE
Q 047705 11 NLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIG 90 (585)
Q Consensus 11 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 90 (585)
+.+.+++++|+++ .+|..+. ++|++|+|++|.+++.+ ...+..+++|++|+|++|+++.++. ..|..+++|++|+
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLP-HGVFDKLTQLTKLSLSQNQIQSLPD-GVFDKLTKLTILY 82 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCC-TTTTTTCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEE
T ss_pred CCCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeC-HHHhcCcccccEEECCCCcceEeCh-hHccCCCccCEEE
Confidence 3578999999997 4555443 69999999999998544 4445579999999999999999986 7789999999999
Q ss_pred ccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCC
Q 047705 91 LSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKL 170 (585)
Q Consensus 91 Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 170 (585)
|++|+++++.+. .|..+++|++|+|++|+++++.+..|..+++|++|+|++|.+
T Consensus 83 l~~N~l~~~~~~--------------------------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 83 LHENKLQSLPNG--------------------------VFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp CCSSCCCCCCTT--------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCCccccCHH--------------------------HhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 999999855443 244556666666666666655555566666666666666666
Q ss_pred CccC
Q 047705 171 EGSI 174 (585)
Q Consensus 171 ~~~~ 174 (585)
++..
T Consensus 137 ~~~~ 140 (177)
T 2o6r_A 137 DCSC 140 (177)
T ss_dssp CCCH
T ss_pred eccC
Confidence 6443
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2e-16 Score=139.60 Aligned_cols=129 Identities=22% Similarity=0.276 Sum_probs=106.9
Q ss_pred CCCCccEEEccCCCCC--CCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCC
Q 047705 57 RLPNLEELVLWGNNFS--ELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLT 134 (585)
Q Consensus 57 ~l~~L~~L~L~~n~l~--~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 134 (585)
..++|++|++++|.++ .+| ..+..+++|++|++++|+++++ ..++.++. |++|++++|.+++.+|..+..++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~--~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~-L~~L~Ls~n~i~~~~~~~~~~l~ 88 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLE--GLTDEFEELEFLSTINVGLTSI---ANLPKLNK-LKKLELSDNRVSGGLEVLAEKCP 88 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCC--SCCTTCTTCCEEECTTSCCCCC---TTCCCCTT-CCEEECCSSCCCSCTHHHHHHCT
T ss_pred CCccCeEEEccCCcCChhHHH--HHHhhcCCCcEEECcCCCCCCc---hhhhcCCC-CCEEECCCCcccchHHHHhhhCC
Confidence 3578999999999998 665 5678889999999999999876 35666766 99999999999887888888899
Q ss_pred CccEEEeeCCccccc-cchhhhCCCCCceEEccCCCCCccCc---ccccCCCCCcEEEcCC
Q 047705 135 NLITIDLGGNKLNGS-ILITLSKLQKLQGLVLDDNKLEGSIP---DDICRLVELYKLELGG 191 (585)
Q Consensus 135 ~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~ 191 (585)
+|++|++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 89 ~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 89 NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999999999875 34778889999999999999987666 5788889999998864
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=1.2e-15 Score=138.72 Aligned_cols=128 Identities=19% Similarity=0.172 Sum_probs=75.6
Q ss_pred CCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCc
Q 047705 57 RLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNL 136 (585)
Q Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 136 (585)
.+++|++|+|++|+++.++ ......++|++|+|++|+++ +. ..|..+++|
T Consensus 17 ~~~~L~~L~l~~n~l~~i~--~~~~~~~~L~~L~Ls~N~l~--------------------------~~--~~l~~l~~L 66 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPVIE--NLGATLDQFDAIDFSDNEIR--------------------------KL--DGFPLLRRL 66 (176)
T ss_dssp CTTSCEEEECTTSCCCSCC--CGGGGTTCCSEEECCSSCCC--------------------------EE--CCCCCCSSC
T ss_pred CcCCceEEEeeCCCCchhH--HhhhcCCCCCEEECCCCCCC--------------------------cc--cccccCCCC
Confidence 4555666666666665553 21122225555555555554 32 345666777
Q ss_pred cEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcc--cccCCCCCcEEEcCCCcccccCcc----cccCcccchh
Q 047705 137 ITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPD--DICRLVELYKLELGGNKLSRSIPA----CFNNLIALRI 210 (585)
Q Consensus 137 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~ 210 (585)
++|+|++|+|+++.+..|..+++|++|+|++|+|+. +|. .+..+++|+.|++++|.++. .|. .+..+++|+.
T Consensus 67 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSE
T ss_pred CEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccce
Confidence 777777777776655556777777777777777763 333 56677777777777777763 333 2455555555
Q ss_pred hcCCCC
Q 047705 211 LSLGSN 216 (585)
Q Consensus 211 L~l~~n 216 (585)
|+++.|
T Consensus 145 Ld~~~n 150 (176)
T 1a9n_A 145 LDFQKV 150 (176)
T ss_dssp ETTEEC
T ss_pred eCCCcC
Confidence 555444
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=8.8e-16 Score=139.62 Aligned_cols=114 Identities=14% Similarity=0.161 Sum_probs=75.6
Q ss_pred CccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhh
Q 047705 27 PVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIG 106 (585)
Q Consensus 27 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 106 (585)
...+.+..+|++|+|++|.|++ ++... ...++|++|+|++|+|+.+ ..|..+++|++|+|++|+|+++.+. .++
T Consensus 12 ~~~~~~~~~L~~L~l~~n~l~~-i~~~~-~~~~~L~~L~Ls~N~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~ 85 (176)
T 1a9n_A 12 AAQYTNAVRDRELDLRGYKIPV-IENLG-ATLDQFDAIDFSDNEIRKL---DGFPLLRRLKTLLVNNNRICRIGEG-LDQ 85 (176)
T ss_dssp SCEEECTTSCEEEECTTSCCCS-CCCGG-GGTTCCSEEECCSSCCCEE---CCCCCCSSCCEEECCSSCCCEECSC-HHH
T ss_pred HHhcCCcCCceEEEeeCCCCch-hHHhh-hcCCCCCEEECCCCCCCcc---cccccCCCCCEEECCCCcccccCcc-hhh
Confidence 3567788999999999999984 44433 2345999999999999987 4688999999999999999865443 334
Q ss_pred cccccccEEEeecCcceecCC-ccccCCCCccEEEeeCCccc
Q 047705 107 NLSHSLEDFQMHNCNVTGDIP-EEIGNLTNLITIDLGGNKLN 147 (585)
Q Consensus 107 ~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 147 (585)
.++. |++|++++|.++...+ ..+..+++|++|++++|.+.
T Consensus 86 ~l~~-L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 86 ALPD-LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp HCTT-CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cCCC-CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 4443 4444444444432111 13444444444444444444
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=1.5e-17 Score=154.46 Aligned_cols=155 Identities=23% Similarity=0.294 Sum_probs=83.5
Q ss_pred ccCCCCCCEEecCCCcccccCCc------cccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCcc
Q 047705 6 IGNLQNLEELDLRQNKLIGTVPV------AIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSS 79 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 79 (585)
|....+++.++++.+.+++..|. .+..+++|++|+|++|.|++ ++ .+..+++|++|+|++|+++.+| ..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~~l~--~~ 88 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIKKIE--NL 88 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEECSCS--SH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCccccc--ch
Confidence 34455666666666666655555 66666666666666666653 33 2234566666666666666554 33
Q ss_pred ccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccc-hhhhCCC
Q 047705 80 LSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSIL-ITLSKLQ 158 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 158 (585)
+..+++|++|+|++|+++++ | .+..+++|++|++++|++.+..+ ..+..++
T Consensus 89 ~~~~~~L~~L~L~~N~l~~l---------------------------~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~ 140 (198)
T 1ds9_A 89 DAVADTLEELWISYNQIASL---------------------------S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALD 140 (198)
T ss_dssp HHHHHHCSEEEEEEEECCCH---------------------------H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTT
T ss_pred hhcCCcCCEEECcCCcCCcC---------------------------C-ccccCCCCCEEECCCCcCCchhHHHHHhcCC
Confidence 44445555555555555432 1 24444555555555555554332 3455555
Q ss_pred CCceEEccCCCCCccCcc----------cccCCCCCcEEEcCCCccc
Q 047705 159 KLQGLVLDDNKLEGSIPD----------DICRLVELYKLELGGNKLS 195 (585)
Q Consensus 159 ~L~~L~L~~N~l~~~~~~----------~~~~l~~L~~L~L~~N~l~ 195 (585)
+|++|++++|.+++.+|. .+..+++|+.|+ +|.++
T Consensus 141 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 141 KLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 555555555555544332 255566666654 45544
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.5e-14 Score=130.61 Aligned_cols=91 Identities=22% Similarity=0.226 Sum_probs=83.6
Q ss_pred CCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEe
Q 047705 227 KVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNL 306 (585)
Q Consensus 227 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 306 (585)
+.|+.|+|++|.|+++.|..|.++++|++|+|++|+++++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 57888999999999988999999999999999999999888888999999999999999999887778999999999999
Q ss_pred ecCcCeeeCCC
Q 047705 307 SFNKLEGEIPR 317 (585)
Q Consensus 307 ~~N~l~~~~~~ 317 (585)
++|+|.|.|+.
T Consensus 110 ~~N~~~c~c~~ 120 (170)
T 3g39_A 110 LNNPWDCACSD 120 (170)
T ss_dssp CSSCBCTTBGG
T ss_pred CCCCCCCCchh
Confidence 99999998873
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=3.1e-17 Score=152.41 Aligned_cols=132 Identities=26% Similarity=0.306 Sum_probs=60.1
Q ss_pred hhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCCCCCccCCCCCCCcEE
Q 047705 153 TLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSNDPLPLEIGNLKVLVGI 232 (585)
Q Consensus 153 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~L~~L 232 (585)
.|..+++|++|+|++|+|++ +| .+..+++|++|++++|.++ .+|..+..+++ |+.|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~---------------------L~~L 98 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT---------------------LEEL 98 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH---------------------CSEE
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc---------------------CCEE
Confidence 45555555555555555553 33 4455555555555555554 23332222222 3333
Q ss_pred EccCCcccccCCcccCCCCCCcEEeecccCcccccC-ccccCcCCCCEEeCCCCccCccCCh----------hhccCCcc
Q 047705 233 DFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIP-DSFGNLISLKFLNLSNNNLSGAIPA----------SLEKLSYL 301 (585)
Q Consensus 233 ~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~~l~~L 301 (585)
++++|.+++. | .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++++..|. .+..+++|
T Consensus 99 ~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L 176 (198)
T 1ds9_A 99 WISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNL 176 (198)
T ss_dssp EEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSC
T ss_pred ECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCc
Confidence 3344444432 1 24444445555555555443221 2344455555555555555443332 24555556
Q ss_pred ceEEeecCcCe
Q 047705 302 EDLNLSFNKLE 312 (585)
Q Consensus 302 ~~l~l~~N~l~ 312 (585)
+.|| +|+++
T Consensus 177 ~~Ld--~~~i~ 185 (198)
T 1ds9_A 177 KKLD--GMPVD 185 (198)
T ss_dssp SEEC--CGGGT
T ss_pred EEEC--CcccC
Confidence 6554 44443
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=1.9e-13 Score=141.00 Aligned_cols=283 Identities=17% Similarity=0.138 Sum_probs=201.4
Q ss_pred ccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCC---------------------cCCccccCCCCCcc
Q 047705 4 LEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSG---------------------SLSSITDVRLPNLE 62 (585)
Q Consensus 4 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~~~~~~l~~L~ 62 (585)
.+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++. .+....|...++|+
T Consensus 88 ~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~ 165 (394)
T 4fs7_A 88 FAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLE 165 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCC
T ss_pred hHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCccccccchhhhcccCCCc
Confidence 46888999999999866 67678889999999998887654 221 11222344555666
Q ss_pred EEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEee
Q 047705 63 ELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLG 142 (585)
Q Consensus 63 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 142 (585)
.+.+.++ +..++. ..|..+++|+.+++..| ++.+... .+.+... |+.+.+..+... +...+....+|+.+.+.
T Consensus 166 ~i~l~~~-~~~I~~-~~F~~c~~L~~i~l~~~-~~~I~~~-~F~~~~~-L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 166 YVSLPDS-METLHN-GLFSGCGKLKSIKLPRN-LKIIRDY-CFAECIL-LENMEFPNSLYY--LGDFALSKTGVKNIIIP 238 (394)
T ss_dssp EEECCTT-CCEECT-TTTTTCTTCCBCCCCTT-CCEECTT-TTTTCTT-CCBCCCCTTCCE--ECTTTTTTCCCCEEEEC
T ss_pred EEecCCc-cceecc-ccccCCCCceEEEcCCC-ceEeCch-hhccccc-cceeecCCCceE--eehhhcccCCCceEEEC
Confidence 6666543 344544 56666666666666555 3333322 4444443 555555544332 12223344667777775
Q ss_pred CCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCC
Q 047705 143 GNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLP 220 (585)
Q Consensus 143 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~ 220 (585)
.+ +..+...+|.++..|+.+.+..+..+ +....|..+..++.+....+.+. ...|..+.+|+.+.+..+- ...
T Consensus 239 ~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~i~~I~~ 313 (394)
T 4fs7_A 239 DS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDSVKFIGE 313 (394)
T ss_dssp TT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTTCCEECT
T ss_pred CC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccccceech
Confidence 43 44466778899999999999988665 77788999999999998877543 3578889999999987764 445
Q ss_pred ccCCCCCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCc
Q 047705 221 LEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSY 300 (585)
Q Consensus 221 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 300 (585)
..|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..| ++.+...+|.++++|+.+++..+ ++ ....+|.++++
T Consensus 314 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~ 389 (394)
T 4fs7_A 314 EAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTK 389 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCE
T ss_pred hhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCC
Confidence 56889999999999754 77788899999999999999887 77788889999999999999765 44 33567888888
Q ss_pred cceE
Q 047705 301 LEDL 304 (585)
Q Consensus 301 L~~l 304 (585)
|+.+
T Consensus 390 L~~I 393 (394)
T 4fs7_A 390 FKWI 393 (394)
T ss_dssp EEEE
T ss_pred CcEE
Confidence 8764
No 397
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.51 E-value=8.1e-13 Score=136.28 Aligned_cols=294 Identities=13% Similarity=0.164 Sum_probs=198.1
Q ss_pred cccCC-CCCCEEecCCCcccccCCccccCCCCCCEEecCCCc---CCCcCCccccCCCCCccEEEccCCCCCCCccCccc
Q 047705 5 EIGNL-QNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNS---LSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSL 80 (585)
Q Consensus 5 ~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (585)
+|.+. ..|+.+.|-.+ ++.+...+|.++++|+.+.+..|. ++ .+....|....+|+.+.+..+ ++.++. .+|
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~I~~-~aF 133 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTEIDS-EAF 133 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSEECT-TTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cceehh-hhh
Confidence 35555 35777777654 666777788888888888877653 44 455555666677777776543 666665 677
Q ss_pred cCCCCCcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCC
Q 047705 81 SNCKSLTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKL 160 (585)
Q Consensus 81 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 160 (585)
..+.+|+.+.+..+ +..+... .+..... |+.+.+..+ ++.+...+|.. ..|+.+.+..+- ..+...+|.++.++
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~-~F~~c~~-L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c~~l 207 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADG-MFSYCYS-LHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSECFAL 207 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTT-TTTTCTT-CCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTCTTC
T ss_pred hhhcccccccccce-eeeeccc-ceecccc-cccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhcccc
Confidence 77888888887644 3333333 4555554 777777654 55555666654 567777776543 33556777777777
Q ss_pred ceEEccCCCCCccCcccc-------------cCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCC
Q 047705 161 QGLVLDDNKLEGSIPDDI-------------CRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGN 225 (585)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~-------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~ 225 (585)
+......+.........+ .....+..+.+. +.+......+|..+.+|+.+.+..+. .....+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~ 286 (394)
T 4gt6_A 208 STITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMN 286 (394)
T ss_dssp CEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTT
T ss_pred ceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccceecCccccc
Confidence 777766655442211111 112233444443 23333445678888889988887664 44556788
Q ss_pred CCCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEE
Q 047705 226 LKVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLN 305 (585)
Q Consensus 226 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 305 (585)
+..|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.+...+|.+|.+|+.+.+..+ ++.+...+|.++.+|+.++
T Consensus 287 c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 287 CPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp CTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred ccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 8999999986 5677677888999999999999765 66677789999999999999654 7767778999999999999
Q ss_pred eecCcCe
Q 047705 306 LSFNKLE 312 (585)
Q Consensus 306 l~~N~l~ 312 (585)
+.+|...
T Consensus 364 ~~~~~~~ 370 (394)
T 4gt6_A 364 YSGSRSQ 370 (394)
T ss_dssp ESSCHHH
T ss_pred ECCceee
Confidence 9988654
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=4.1e-14 Score=128.10 Aligned_cols=91 Identities=22% Similarity=0.299 Sum_probs=81.0
Q ss_pred CCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEe
Q 047705 227 KVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNL 306 (585)
Q Consensus 227 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 306 (585)
++|+.|+|++|.++++.|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 57888899999999888889999999999999999999877777889999999999999999777777899999999999
Q ss_pred ecCcCeeeCCC
Q 047705 307 SFNKLEGEIPR 317 (585)
Q Consensus 307 ~~N~l~~~~~~ 317 (585)
++|+|.|.++.
T Consensus 113 ~~N~~~c~~~~ 123 (174)
T 2r9u_A 113 YNNPWDCECRD 123 (174)
T ss_dssp CSSCBCTTBGG
T ss_pred CCCCccccccc
Confidence 99999988763
No 399
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.2e-13 Score=124.68 Aligned_cols=86 Identities=24% Similarity=0.232 Sum_probs=56.8
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 191 (585)
|++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 32 l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (170)
T 3g39_A 32 TQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLN 111 (170)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCC
Confidence 33444444444444445566677777777777777766666677777777777777777766666677777777777777
Q ss_pred Cccccc
Q 047705 192 NKLSRS 197 (585)
Q Consensus 192 N~l~~~ 197 (585)
|.+...
T Consensus 112 N~~~c~ 117 (170)
T 3g39_A 112 NPWDCA 117 (170)
T ss_dssp SCBCTT
T ss_pred CCCCCC
Confidence 777643
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.48 E-value=2.4e-12 Score=132.80 Aligned_cols=299 Identities=12% Similarity=0.138 Sum_probs=218.0
Q ss_pred cccccCCccccCCC-CCCEEecCCCcCCCcCCccccCCCCCccEEEccCCC---CCCCccCccccCCCCCcEEEccCCCC
Q 047705 21 KLIGTVPVAIFNVS-TLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNN---FSELNFLSSLSNCKSLTVIGLSNNPL 96 (585)
Q Consensus 21 ~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~~l~~L~~L~Ls~N~l 96 (585)
.++.+...+|.+.+ .|+.+.|-.+ ++ .+...+|...++|+++.+..|. ++.++. .+|..+.+|+.+.+..+ +
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~-~aF~~c~~L~~i~~~~~-~ 125 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGR-QAFMFCSELTDIPILDS-V 125 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECT-TTTTTCTTCCBCGGGTT-C
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEech-hhchhcccceeeccCCc-c
Confidence 35566677888874 5999999764 66 6777778889999999998875 777776 78999999999888765 5
Q ss_pred cccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcc
Q 047705 97 DGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPD 176 (585)
Q Consensus 97 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 176 (585)
+.+... ++.+... |+.+.+.. .+..+...+|..+..|+.+.+.++ +..+...+|.+ ..|+.+.+..+-.. +...
T Consensus 126 ~~I~~~-aF~~c~~-L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~ 199 (394)
T 4gt6_A 126 TEIDSE-AFHHCEE-LDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTN 199 (394)
T ss_dssp SEECTT-TTTTCTT-CCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTT
T ss_pred ceehhh-hhhhhcc-cccccccc-eeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccc
Confidence 445444 5566665 99999964 456677788999999999999765 66577777865 67999999876544 6777
Q ss_pred cccCCCCCcEEEcCCCcccccCccccc-------------CcccchhhcCCCCC--CCCccCCCCCCCcEEEccCCcccc
Q 047705 177 DICRLVELYKLELGGNKLSRSIPACFN-------------NLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMNNFSG 241 (585)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~~~~~~-------------~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N~l~~ 241 (585)
.|..+.++.......+.........+. ....+..+.+..+- .....|..+..|+.+.+..+..+
T Consensus 200 af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~- 278 (394)
T 4gt6_A 200 AFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS- 278 (394)
T ss_dssp TTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-
T ss_pred hhhhccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-
Confidence 888889999888777665422111111 11122222232221 33445788899999999766544
Q ss_pred cCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC--C
Q 047705 242 IIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG--G 319 (585)
Q Consensus 242 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~--~ 319 (585)
+...+|.+++.|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++. +... .
T Consensus 279 I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~-I~~~aF~ 354 (394)
T 4gt6_A 279 IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTK-IPESAFS 354 (394)
T ss_dssp ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCB-CCGGGGT
T ss_pred ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCE-EhHhHhh
Confidence 778899999999999996 5677677889999999999999865 77677889999999999999765 442 3322 2
Q ss_pred CCCCCCccccCCCCc
Q 047705 320 SFGNFSAESFEGNEL 334 (585)
Q Consensus 320 ~~~~~~~~~~~~n~~ 334 (585)
....++.+.+.++..
T Consensus 355 ~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 355 NCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECCcee
Confidence 345677777777643
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.6e-13 Score=122.76 Aligned_cols=85 Identities=25% Similarity=0.237 Sum_probs=56.5
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCC
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGG 191 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 191 (585)
|++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 35 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~ 114 (174)
T 2r9u_A 35 KQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYN 114 (174)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCS
T ss_pred CcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCC
Confidence 44444444444444445566677777777777777766666677777777777777777766665677777777777777
Q ss_pred Ccccc
Q 047705 192 NKLSR 196 (585)
Q Consensus 192 N~l~~ 196 (585)
|.+..
T Consensus 115 N~~~c 119 (174)
T 2r9u_A 115 NPWDC 119 (174)
T ss_dssp SCBCT
T ss_pred CCccc
Confidence 77763
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.46 E-value=1e-15 Score=156.14 Aligned_cols=166 Identities=18% Similarity=0.133 Sum_probs=97.0
Q ss_pred CCCCEEecCCCcCCCcCC----ccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhc--
Q 047705 34 STLKLLGLQDNSLSGSLS----SITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGN-- 107 (585)
Q Consensus 34 ~~L~~L~L~~n~l~~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-- 107 (585)
++|++|+|++|.|+.... .......++|++|+|++|.|+..........+++|++|+|++|+|+..... .+..
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~-~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACK-DLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHH-HHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHH-HHHHHH
Confidence 466677777776652111 111112356777777777765533211223455677777777777543222 1111
Q ss_pred --ccccccEEEeecCcceec----CCccccCCCCccEEEeeCCcccccc----chhhhCCCCCceEEccCCCCCccC---
Q 047705 108 --LSHSLEDFQMHNCNVTGD----IPEEIGNLTNLITIDLGGNKLNGSI----LITLSKLQKLQGLVLDDNKLEGSI--- 174 (585)
Q Consensus 108 --~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~--- 174 (585)
...+|++|+|++|.++.. ++..+..+++|++|+|++|.|.... ...+...++|++|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 112366666666666542 2334466788888888888877533 445666778888888888887533
Q ss_pred -cccccCCCCCcEEEcCCCcccccCcc
Q 047705 175 -PDDICRLVELYKLELGGNKLSRSIPA 200 (585)
Q Consensus 175 -~~~~~~l~~L~~L~L~~N~l~~~~~~ 200 (585)
+..+...++|++|+|++|.|+.....
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 23344567788888888888754333
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.42 E-value=5.7e-15 Score=150.56 Aligned_cols=139 Identities=15% Similarity=0.153 Sum_probs=73.3
Q ss_pred CCCccEEEeeCCccccccchhhh-----CCCCCceEEccCCCCCcc----CcccccCCCCCcEEEcCCCcccccCccccc
Q 047705 133 LTNLITIDLGGNKLNGSILITLS-----KLQKLQGLVLDDNKLEGS----IPDDICRLVELYKLELGGNKLSRSIPACFN 203 (585)
Q Consensus 133 l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 203 (585)
+++|++|+|++|.|+......+. ..++|++|+|++|.|+.. ++..+...++|++|+|++|.|+......+.
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 34566666666666544333332 346677777777766542 223335566677777777776532211110
Q ss_pred CcccchhhcCCCCCCCCccCCCCCCCcEEEccCCccccc----CCcccCCCCCCcEEeecccCcccccCccccCcC----
Q 047705 204 NLIALRILSLGSNDPLPLEIGNLKVLVGIDFSMNNFSGI----IPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLI---- 275 (585)
Q Consensus 204 ~l~~L~~L~l~~n~~~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~---- 275 (585)
..+...+.|+.|+|++|.|+.. ++..+...++|++|+|++|.+++.....+..+.
T Consensus 205 -----------------~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~ 267 (372)
T 3un9_A 205 -----------------AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAE 267 (372)
T ss_dssp -----------------HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC----
T ss_pred -----------------HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCC
Confidence 0122334566666666666542 223344567788888888887765444443321
Q ss_pred -CCCEEe--CCCCccC
Q 047705 276 -SLKFLN--LSNNNLS 288 (585)
Q Consensus 276 -~L~~L~--l~~N~l~ 288 (585)
.|+.+. +..|.++
T Consensus 268 ~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 268 GGARVVVSLTEGTAVS 283 (372)
T ss_dssp --CEEECCCC----CH
T ss_pred ccchhhHhhhcCCccC
Confidence 266666 6666665
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.42 E-value=6.5e-13 Score=128.91 Aligned_cols=148 Identities=14% Similarity=0.092 Sum_probs=116.4
Q ss_pred HHHhcCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCCeEEE
Q 047705 409 LCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 409 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 487 (585)
+....++|++....+.|+.+.||++... ++.+++|+...........+..|+++++.+. +..++++++++...+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3455678988888999999999999754 6789999987543233456888999999984 6778899999998889999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 047705 488 VLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG------------------------------------- 530 (585)
Q Consensus 488 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~------------------------------------- 530 (585)
||||++|.++.+.+.. ......++.++++++..||..
T Consensus 88 v~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999998876321 112346788999999999940
Q ss_pred -------------------CCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 531 -------------------CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 531 -------------------~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
....++|+|++|.||++++++.+.|+||+.+..
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998764
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=3.6e-13 Score=136.45 Aligned_cols=120 Identities=23% Similarity=0.215 Sum_probs=89.9
Q ss_pred CCccCCCCCCCcEEEccC-CcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhcc
Q 047705 219 LPLEIGNLKVLVGIDFSM-NNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEK 297 (585)
Q Consensus 219 ~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 297 (585)
+|. +..+++|+.|+|++ |.|+++.+..|.++++|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++..+..+..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 344 55666778888885 8888888888999999999999999999888888899999999999999999776666666
Q ss_pred CCccceEEeecCcCeeeCCCCCC--CCCCCccccCCCCcccCCCC
Q 047705 298 LSYLEDLNLSFNKLEGEIPRGGS--FGNFSAESFEGNELLCGSPN 340 (585)
Q Consensus 298 l~~L~~l~l~~N~l~~~~~~~~~--~~~~~~~~~~~n~~~c~~~~ 340 (585)
++ |+.|+|++|+|.|+|...+. |.......+..+...|..|.
T Consensus 103 ~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 65 99999999999988864321 11112223345667776654
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=5e-12 Score=127.96 Aligned_cols=90 Identities=20% Similarity=0.114 Sum_probs=50.8
Q ss_pred CCCcEEEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCC-hhhccCCccceEE
Q 047705 227 KVLVGIDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIP-ASLEKLSYLEDLN 305 (585)
Q Consensus 227 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~ 305 (585)
++|+.|+|++|+|+++.|..|.++++|+.|+|++|+|+++.+..|..++ |+.|+|.+|++...-. .++..+.......
T Consensus 56 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~ 134 (347)
T 2ifg_A 56 GELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGG 134 (347)
T ss_dssp CCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSS
T ss_pred cCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCccc
Confidence 3344444455555555556666666666677777766665555555554 7777777777663221 2233332233334
Q ss_pred eecCcCeeeCCC
Q 047705 306 LSFNKLEGEIPR 317 (585)
Q Consensus 306 l~~N~l~~~~~~ 317 (585)
+..+.++|..|.
T Consensus 135 l~~~~~~C~~~~ 146 (347)
T 2ifg_A 135 VPEQKLQCHGQG 146 (347)
T ss_dssp CGGGCCCCSSSS
T ss_pred ccccCCCCCCCh
Confidence 456777777665
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.29 E-value=2.9e-10 Score=116.46 Aligned_cols=288 Identities=12% Similarity=0.087 Sum_probs=204.2
Q ss_pred ccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCC
Q 047705 6 IGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKS 85 (585)
Q Consensus 6 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 85 (585)
+....+|+.+.+... ++.+...+|.++.+|+.++|..+ ++ .+....|... +|+.+.+.. .++.++. .+|... +
T Consensus 42 ~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~-~l~~I~~-~aF~~~-~ 114 (379)
T 4h09_A 42 YKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGME-RVKKFGD-YVFQGT-D 114 (379)
T ss_dssp GGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECT-TCCEECT-TTTTTC-C
T ss_pred cccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCc-eeeEecc-ceeccC-C
Confidence 455677888888654 77788889999999999999754 66 5555556554 688888764 4777775 677764 7
Q ss_pred CcEEEccCCCCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccc------------cchh
Q 047705 86 LTVIGLSNNPLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGS------------ILIT 153 (585)
Q Consensus 86 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------~~~~ 153 (585)
|+.+.+..+ ++.+... ++.+. .++.+.+.. +++.+...+|....+++.+.+..+..... ....
T Consensus 115 L~~i~lp~~-~~~i~~~-~F~~~--~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNY-IFYNS--SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILES 189 (379)
T ss_dssp CSEEECCTT-CCEECTT-TTTTC--CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEE
T ss_pred cccccCCCc-ccccccc-ccccc--eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecc
Confidence 999999765 3334333 34433 366666654 45556777888888888888876543321 1223
Q ss_pred hhCCCCCceEEccCCCCCccCcccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcE
Q 047705 154 LSKLQKLQGLVLDDNKLEGSIPDDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVG 231 (585)
Q Consensus 154 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~ 231 (585)
|.....+..+.+..+.-. .....+....+|+.+.+..+ +.......|..+.+|+.+.+..+- .....+.++..|+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKNVTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTTCCEECTTTTTTCTTCCE
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCCccEeCccccceeehhcc
Confidence 445556666665544333 55566777788888888665 443556678888888888887663 44456778888888
Q ss_pred EEccCCcccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecC
Q 047705 232 IDFSMNNFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFN 309 (585)
Q Consensus 232 L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 309 (585)
+.+..+ +..+....|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 268 i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 268 LNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 888654 66677778889999999999888888777888999999999998754 77677788889999998887654
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.27 E-value=8e-12 Score=120.92 Aligned_cols=140 Identities=16% Similarity=0.082 Sum_probs=102.9
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc--ceeEEeeeecCCeEEEEEE
Q 047705 413 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN--LIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 490 (585)
..+|.+....+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +++++++....+..++|||
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3455554333456669999998777888999987643 2356778999999885444 5678998888888999999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC--------------------------------------- 531 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--------------------------------------- 531 (585)
|++|.++. ... .+ ...++.++++.+..||...
T Consensus 96 ~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 96 EVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred ecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 99998884 211 12 1256778888888888311
Q ss_pred ----------------CCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 532 ----------------STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 532 ----------------~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
...++|+|++|.||++++++.+.|+|||.|...
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999987766779999998753
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.12 E-value=3e-09 Score=108.85 Aligned_cols=288 Identities=11% Similarity=0.011 Sum_probs=205.1
Q ss_pred ccccCCCCCCEEecCCCcCCCcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCcccCCcchhhc
Q 047705 28 VAIFNVSTLKLLGLQDNSLSGSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLDGILPKTSIGN 107 (585)
Q Consensus 28 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 107 (585)
+++....+|+.+.+.. .++ .++..+|....+|++++|.. .++.++. .+|... +|+.+.+..+ ++.+... ++..
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~-~aF~~c-~l~~i~~~~~-l~~I~~~-aF~~ 112 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAS-TVTSIGD-GAFADT-KLQSYTGMER-VKKFGDY-VFQG 112 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEE-EECTTTTTTCTTCCEEEECT-TCCEECT-TTTTTC-CCCEEEECTT-CCEECTT-TTTT
T ss_pred cccccccCCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCC-cceEech-hhhcCC-CCceEECCce-eeEeccc-eecc
Confidence 4566677899998865 466 66666777888999999965 4888876 788887 6888877644 5545444 4443
Q ss_pred ccccccEEEeecCcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCCCCCc------------cCc
Q 047705 108 LSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDNKLEG------------SIP 175 (585)
Q Consensus 108 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------~~~ 175 (585)
. +|+.+.+..+ ++.+...+|.+. +|+.+.+.. .++.+...+|.++.+++.+.+..+.... ...
T Consensus 113 ~--~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T 4h09_A 113 T--DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTIL 187 (379)
T ss_dssp C--CCSEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEE
T ss_pred C--CcccccCCCc-cccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceeccccccee
Confidence 3 4888888764 444556667654 677776654 4555677888888999988887655331 112
Q ss_pred ccccCCCCCcEEEcCCCcccccCcccccCcccchhhcCCCCC--CCCccCCCCCCCcEEEccCCcccccCCcccCCCCCC
Q 047705 176 DDICRLVELYKLELGGNKLSRSIPACFNNLIALRILSLGSND--PLPLEIGNLKVLVGIDFSMNNFSGIIPKEIGGLKNL 253 (585)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 253 (585)
..+.....+..+.+..+.-. .....+....+|+.+.+..+- .....+..+..|+.+.+..+ ++.+...+|.++.+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp EECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred ccccccccccccccccceeE-EeecccccccccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 23444556666666554432 455667778888888887664 44556788999999999876 776888899999999
Q ss_pred cEEeecccCcccccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC-CCCCCCCccccCC
Q 047705 254 EYLFLGYNRLQGLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG-GSFGNFSAESFEG 331 (585)
Q Consensus 254 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~ 331 (585)
+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-... .....++.+.+..
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 99999755 66577789999999999999999999888899999999999999765 54332222 1234566555543
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=2.9e-10 Score=115.50 Aligned_cols=143 Identities=13% Similarity=0.152 Sum_probs=106.2
Q ss_pred CccceecccCceEEEEEEeCCCcEEEEEEEe--chh-hhhHHHHHHHHHHHHhcC--CCcceeEEeeeecC---CeEEEE
Q 047705 417 SENNLIGRGGFGSVYKARLGDGMEVAVKVFN--LQC-RRAFKSFDVECEIMKSIR--HRNLIKVISSCSNE---EFKGLV 488 (585)
Q Consensus 417 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 488 (585)
...+.++.|.++.||++...+ ..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..|+|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 346789999999999998654 578888765 322 123457888999999997 45678999888766 458999
Q ss_pred EEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 047705 489 LEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC------------------------------------- 531 (585)
Q Consensus 489 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------------------- 531 (585)
|||++|..+.+... ..++..+...++.+++++|..||...
T Consensus 120 me~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999987754221 13567778889999999999999410
Q ss_pred ------------------CCCcEEcCCCCCCEEeCCCCc--EEEeeeccccc
Q 047705 532 ------------------STPVIHCDLKPSNVLLDDNMI--AYLSDFGIAKL 563 (585)
Q Consensus 532 ------------------~~~iiH~dlkp~NIll~~~~~--~kl~Dfg~a~~ 563 (585)
...++|+|++|.||++++++. +.|+||+.|..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256899999999999997653 69999998874
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.07 E-value=2.7e-11 Score=122.34 Aligned_cols=182 Identities=15% Similarity=0.131 Sum_probs=101.9
Q ss_pred CccccCCCCCCEEecCCCcCCC---------cCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCc
Q 047705 27 PVAIFNVSTLKLLGLQDNSLSG---------SLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLD 97 (585)
Q Consensus 27 ~~~~~~l~~L~~L~L~~n~l~~---------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 97 (585)
.++...+++|+.|.+..+.... .+.. ....+|+|++|+|++|.-..++ .+. +++|++|+|+.+.+.
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~-ll~~~P~L~~L~L~g~~~l~l~---~~~-~~~L~~L~L~~~~l~ 206 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSP-VLDAMPLLNNLKIKGTNNLSIG---KKP-RPNLKSLEIISGGLP 206 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHH-HHHTCTTCCEEEEECCBTCBCC---SCB-CTTCSEEEEECSBCC
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHH-HHhcCCCCcEEEEeCCCCceec---ccc-CCCCcEEEEecCCCC
Confidence 3445566677777765543210 0111 1124677777777766322222 132 677777777777664
Q ss_pred ccCCcchhh--cccccccEEEeec--Ccceec-----CCccc--cCCCCccEEEeeCCccccccchhhh---CCCCCceE
Q 047705 98 GILPKTSIG--NLSHSLEDFQMHN--CNVTGD-----IPEEI--GNLTNLITIDLGGNKLNGSILITLS---KLQKLQGL 163 (585)
Q Consensus 98 ~~~~~~~~~--~~~~~L~~L~l~~--n~l~~~-----~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L 163 (585)
..... .+. .+|+ |+.|+|+. |...+. +...+ ..+++|++|+|++|.+....+..+. .+++|++|
T Consensus 207 ~~~l~-~l~~~~lp~-L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~L 284 (362)
T 2ra8_A 207 DSVVE-DILGSDLPN-LEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETM 284 (362)
T ss_dssp HHHHH-HHHHSBCTT-CCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEE
T ss_pred hHHHH-HHHHccCCC-CcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEE
Confidence 32111 122 3454 77777753 111111 11122 2478899999988888754443443 47789999
Q ss_pred EccCCCCCccCc----ccccCCCCCcEEEcCCCcccccCcccccC-cccchhhcCCCCC
Q 047705 164 VLDDNKLEGSIP----DDICRLVELYKLELGGNKLSRSIPACFNN-LIALRILSLGSND 217 (585)
Q Consensus 164 ~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~l~~n~ 217 (585)
+|+.|.|++..+ ..+..+++|+.|+|++|.|+...-..+.. + ...++++.++
T Consensus 285 dLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 285 DISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp ECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred ECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 999888886433 23345688999999988887543333332 2 2446777665
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=1.1e-10 Score=117.91 Aligned_cols=153 Identities=21% Similarity=0.185 Sum_probs=76.8
Q ss_pred hhhhCCCCCceEEccCCC-CCccCcccccCCCCCcEEEcCCCcccccCccccc--CcccchhhcCCCC--CCC-------
Q 047705 152 ITLSKLQKLQGLVLDDNK-LEGSIPDDICRLVELYKLELGGNKLSRSIPACFN--NLIALRILSLGSN--DPL------- 219 (585)
Q Consensus 152 ~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~n--~~~------- 219 (585)
..+..+++|++|+|++|. ++ . +. + .+++|++|+|..|.+.......+. .+++|++|+|+.+ ...
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~-l-~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS-I-GK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB-C-CS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCce-e-cc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 344555666666666552 21 1 21 2 255666666666665433222222 4555555554321 100
Q ss_pred --C-ccCCCCCCCcEEEccCCcccccCCccc---CCCCCCcEEeecccCccccc----CccccCcCCCCEEeCCCCccCc
Q 047705 220 --P-LEIGNLKVLVGIDFSMNNFSGIIPKEI---GGLKNLEYLFLGYNRLQGLI----PDSFGNLISLKFLNLSNNNLSG 289 (585)
Q Consensus 220 --~-~~~~~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~ 289 (585)
+ .....+++|+.|+|++|.+.+..+..+ ..+++|+.|+|+.|.+++.. +..+..+++|+.|++++|.|+.
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 0 011246677777777776654322222 23566777777777776532 2223445677777777776664
Q ss_pred cCChhhcc-CCccceEEeecCc
Q 047705 290 AIPASLEK-LSYLEDLNLSFNK 310 (585)
Q Consensus 290 ~~~~~~~~-l~~L~~l~l~~N~ 310 (585)
.....+.. + ...+++++|.
T Consensus 322 ~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 322 EMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHc--CCEEEecCCc
Confidence 43333332 2 2446666665
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.74 E-value=4.4e-08 Score=97.62 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=101.4
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCC----CcceeEEeeeecCCeEEEEEE
Q 047705 415 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH----RNLIKVISSCSNEEFKGLVLE 490 (585)
Q Consensus 415 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 490 (585)
.....+.++.|....||++ +..+++|+..... ....+..|+++++.+.+ ..+++++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4566788999999999998 6678889764332 23557889999988865 234566655 45689999
Q ss_pred ccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 047705 491 YMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGC--------------------------------------- 531 (585)
Q Consensus 491 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--------------------------------------- 531 (585)
|++|.++...... .++..+...++.++++.+..||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643321 3456666777888888888888321
Q ss_pred ---------------------CCCcEEcCCCCCCEEeCCCCcEEEeeecccccc
Q 047705 532 ---------------------STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKLL 564 (585)
Q Consensus 532 ---------------------~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 564 (585)
...++|+|++|.||++++++.+.++||+.|...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999998653
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.65 E-value=5.4e-08 Score=96.19 Aligned_cols=136 Identities=22% Similarity=0.205 Sum_probs=99.4
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhc-CCCc--ceeEEeeeecCC---eEEEEEEcc
Q 047705 419 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSI-RHRN--LIKVISSCSNEE---FKGLVLEYM 492 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~e~~ 492 (585)
.+.++.|.+..||++. ..+++|+.... .....+..|+++++.+ .+.. +++++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999874 46888986533 3346788899999888 3333 456666554433 358999999
Q ss_pred CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 047705 493 PQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 530 (585)
Q Consensus 493 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~------------------------------------------ 530 (585)
+|.++.+.... .++..+...++.++++.+..||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888654332 356667777888888888888831
Q ss_pred -------------CCCCcEEcCCCCCCEEeCC--CCcEEEeeeccccc
Q 047705 531 -------------CSTPVIHCDLKPSNVLLDD--NMIAYLSDFGIAKL 563 (585)
Q Consensus 531 -------------~~~~iiH~dlkp~NIll~~--~~~~kl~Dfg~a~~ 563 (585)
....++|+|++|.||++++ ++.+.++||+.+..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 0135799999999999987 55689999998875
No 415
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.59 E-value=4.2e-07 Score=89.76 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=94.8
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCC---cceeEEeeee-cCCeEEEEEEccCC
Q 047705 419 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR---NLIKVISSCS-NEEFKGLVLEYMPQ 494 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 494 (585)
.+.++.|....||+. +..+++|+... ......+..|+++++.+.+. .+++++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467888988899988 56788888532 23346788999999999652 3667777764 45667899999999
Q ss_pred CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 047705 495 GSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 530 (585)
Q Consensus 495 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-------------------------------------------- 530 (585)
.++.+.... .++..+...++.++++.+..||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 887663221 123344444555555555555521
Q ss_pred -------------CCCCcEEcCCCCCCEEeCC---CCc-EEEeeeccccc
Q 047705 531 -------------CSTPVIHCDLKPSNVLLDD---NMI-AYLSDFGIAKL 563 (585)
Q Consensus 531 -------------~~~~iiH~dlkp~NIll~~---~~~-~kl~Dfg~a~~ 563 (585)
....++|+|++|.||++++ ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345699999999999987 455 58999998875
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=1.1e-08 Score=93.08 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=36.5
Q ss_pred CCCCccEEEeeCCccccc----cchhhhCCCCCceEEc--cCCCCCccC----cccccCCCCCcEEEcCCCccc
Q 047705 132 NLTNLITIDLGGNKLNGS----ILITLSKLQKLQGLVL--DDNKLEGSI----PDDICRLVELYKLELGGNKLS 195 (585)
Q Consensus 132 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 195 (585)
..++|++|+|++|.|... +..++...++|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 345566666666666542 2334445556666666 566666432 233344566777777777765
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=1.9e-08 Score=91.50 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=68.3
Q ss_pred cccCCCCCcEEEccCC-CCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCcccccc----chh
Q 047705 79 SLSNCKSLTVIGLSNN-PLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSI----LIT 153 (585)
Q Consensus 79 ~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~ 153 (585)
.+...++|++|+|++| .|... ... .+...+...++|++|+|++|.|.... ...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~----g~~------------------~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 88 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVP----TLK------------------ACAEALKTNTYVKKFSIVGTRSNDPVAFALAEM 88 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHH----HHH------------------HHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHH----HHH------------------HHHHHHHhCCCcCEEECcCCCCChHHHHHHHHH
Confidence 4666778888888888 77532 111 12234556788999999999987532 344
Q ss_pred hhCCCCCceEEccCCCCCcc----CcccccCCCCCcEEEc--CCCccccc
Q 047705 154 LSKLQKLQGLVLDDNKLEGS----IPDDICRLVELYKLEL--GGNKLSRS 197 (585)
Q Consensus 154 ~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--~~N~l~~~ 197 (585)
+...++|++|+|++|.|+.. +...+...++|++|+| ++|.|+..
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 55678899999999998854 3455666778999999 78888753
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.51 E-value=1.1e-06 Score=85.12 Aligned_cols=142 Identities=17% Similarity=0.085 Sum_probs=101.5
Q ss_pred cCCCCccceecccCce-EEEEEEeC-CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCCeEEEEE
Q 047705 413 TDGFSENNLIGRGGFG-SVYKARLG-DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 413 ~~~~~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 489 (585)
..+|+. +.+..|..| .||+.... ++..+++|+-... ....+..|+..|+.+. +--++++++++...+..|+||
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvm 99 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLT 99 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEE
Confidence 344543 345666665 68998765 5677899986543 2356778999998884 334778899999899999999
Q ss_pred EccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 047705 490 EYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFG--------------------------------------- 530 (585)
Q Consensus 490 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------------------------------------- 530 (585)
|+++|.++.+...... .....++.++++.+..||..
T Consensus 100 e~l~G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp ECCCSEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred EeeCCccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 9999988877654321 12334566677777777721
Q ss_pred ----------------CCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 531 ----------------CSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 531 ----------------~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011379999999999999877778999998875
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=1.2e-08 Score=97.67 Aligned_cols=80 Identities=24% Similarity=0.310 Sum_probs=56.1
Q ss_pred cCCCCccEEEeeCCcccccc--chhhhCCCCCceEEccCCCCCccCcccccCCC--CCcEEEcCCCcccccCcc------
Q 047705 131 GNLTNLITIDLGGNKLNGSI--LITLSKLQKLQGLVLDDNKLEGSIPDDICRLV--ELYKLELGGNKLSRSIPA------ 200 (585)
Q Consensus 131 ~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~------ 200 (585)
.++++|++|+|++|+|.++. +..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 45788888888888888743 46677888888888888888865 2334444 888888888888765542
Q ss_pred -cccCcccchhhc
Q 047705 201 -CFNNLIALRILS 212 (585)
Q Consensus 201 -~~~~l~~L~~L~ 212 (585)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 244555555553
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.50 E-value=5.3e-07 Score=88.00 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=61.0
Q ss_pred CccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCC---cceeEEeeeecCCeEEEEEEccC
Q 047705 417 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR---NLIKVISSCSNEEFKGLVLEYMP 493 (585)
Q Consensus 417 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 493 (585)
...+.++.|.++.||+++..+|+.+++|+...........+..|++.++.+.+. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999986533222345688999999999765 578888763 3689999999
Q ss_pred CCCH
Q 047705 494 QGSL 497 (585)
Q Consensus 494 ~g~L 497 (585)
|+++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 421
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=3.4e-08 Score=94.54 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=51.4
Q ss_pred CCCCCCcEEEccCCccccc--CCcccCCCCCCcEEeecccCcccccCccccCcC--CCCEEeCCCCccCccCC-------
Q 047705 224 GNLKVLVGIDFSMNNFSGI--IPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLI--SLKFLNLSNNNLSGAIP------- 292 (585)
Q Consensus 224 ~~l~~L~~L~ls~N~l~~~--~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~------- 292 (585)
.++++|+.|+|++|+|+++ ++..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|++++..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 3566777777777777763 345556677777777777777765 2233333 77777777777776544
Q ss_pred hhhccCCccceEE
Q 047705 293 ASLEKLSYLEDLN 305 (585)
Q Consensus 293 ~~~~~l~~L~~l~ 305 (585)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2355666666654
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.40 E-value=1.3e-06 Score=88.28 Aligned_cols=77 Identities=9% Similarity=0.095 Sum_probs=58.2
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc--ceeEEeeeecC-CeEEEEEEcc
Q 047705 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN--LIKVISSCSNE-EFKGLVLEYM 492 (585)
Q Consensus 416 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 492 (585)
....+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +++++.++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34467889999999999976 5788999987432 25778999999886533 56777776654 6789999999
Q ss_pred CCCCHH
Q 047705 493 PQGSLE 498 (585)
Q Consensus 493 ~~g~L~ 498 (585)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.33 E-value=6.4e-07 Score=90.58 Aligned_cols=80 Identities=8% Similarity=-0.032 Sum_probs=56.5
Q ss_pred ccee-cccCceEEEEEEeC-------CCcEEEEEEEechh---hhhHHHHHHHHHHHHhcC-C--CcceeEEeeeecC--
Q 047705 419 NNLI-GRGGFGSVYKARLG-------DGMEVAVKVFNLQC---RRAFKSFDVECEIMKSIR-H--RNLIKVISSCSNE-- 482 (585)
Q Consensus 419 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 482 (585)
.+.| +.|....+|+.... +++.+++|+..... ......+..|+.+++.+. + -.+++++.+....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88989999998754 26678889765432 111256778999988884 2 3577888877655
Q ss_pred -CeEEEEEEccCCCCHH
Q 047705 483 -EFKGLVLEYMPQGSLE 498 (585)
Q Consensus 483 -~~~~lv~e~~~~g~L~ 498 (585)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.13 E-value=4e-07 Score=80.82 Aligned_cols=92 Identities=11% Similarity=0.111 Sum_probs=48.7
Q ss_pred CCccccCCCCCCEEecCCCcccccCCccccCCCCCCEEecCCCc-CCCcCCccccCCC----CCccEEEccCCC-CCCCc
Q 047705 2 IPLEIGNLQNLEELDLRQNKLIGTVPVAIFNVSTLKLLGLQDNS-LSGSLSSITDVRL----PNLEELVLWGNN-FSELN 75 (585)
Q Consensus 2 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~ 75 (585)
+|.....-.+|++|||++|.|+...-..+.++++|++|+|++|. |+ .-.-.....+ ++|++|+|++|. |+.-.
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It-D~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE-DGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC-HHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC-HHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 34433333456666666666665555566666666666666663 43 1110011111 246666666653 55543
Q ss_pred cCccccCCCCCcEEEccCCC
Q 047705 76 FLSSLSNCKSLTVIGLSNNP 95 (585)
Q Consensus 76 ~~~~~~~l~~L~~L~Ls~N~ 95 (585)
. ..+..+++|++|+|+++.
T Consensus 132 l-~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 132 I-IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp H-HHGGGCTTCCEEEEESCT
T ss_pred H-HHHhcCCCCCEEECCCCC
Confidence 3 445566666666666654
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.11 E-value=8.8e-06 Score=83.45 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=50.0
Q ss_pred cceecccCceEEEEEEeC-CCcEEEEEEEechhh-------hhHHHHHHHHHHHHhcCC--C-cceeEEeeeecCCeEEE
Q 047705 419 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCR-------RAFKSFDVECEIMKSIRH--R-NLIKVISSCSNEEFKGL 487 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 487 (585)
.+.+|.|.++.||+++.. +++.|++|....... ....++..|+++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999754 567899997653211 123456779999887742 3 44566654 3345689
Q ss_pred EEEccCCC
Q 047705 488 VLEYMPQG 495 (585)
Q Consensus 488 v~e~~~~g 495 (585)
||||++|.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.07 E-value=1.9e-06 Score=76.45 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=56.7
Q ss_pred ccEEEeecCcceecCCccccCCCCccEEEeeCCc-cccccchhhhCC----CCCceEEccCCC-CCccCcccccCCCCCc
Q 047705 112 LEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNK-LNGSILITLSKL----QKLQGLVLDDNK-LEGSIPDDICRLVELY 185 (585)
Q Consensus 112 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L~ 185 (585)
|+.||+++|.++...-..+.++++|+.|+|++|. |+...-..+..+ ++|++|+|++|. |++..-..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 6666666666655555566778888888888885 665444455553 368888888874 7765555667788888
Q ss_pred EEEcCCCc
Q 047705 186 KLELGGNK 193 (585)
Q Consensus 186 ~L~L~~N~ 193 (585)
+|+|+++.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 88888875
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=2.5e-05 Score=78.15 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=79.4
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCC--CcceeEEe------eeecCCeEEEEEEc
Q 047705 420 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH--RNLIKVIS------SCSNEEFKGLVLEY 491 (585)
Q Consensus 420 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~ 491 (585)
+.++.|..+.||++...+| .+++|+..... ..+..|+.+++.+.. -.+++++. +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677889999987555 58899887521 233345555554421 12344443 11345678999999
Q ss_pred cCCCCHH-----H---------Hhhc--CCC--C---------CCHHH-------------------------------H
Q 047705 492 MPQGSLE-----K---------HLYS--TNC--I---------LDIFQ-------------------------------R 513 (585)
Q Consensus 492 ~~~g~L~-----~---------~l~~--~~~--~---------~~~~~-------------------------------~ 513 (585)
++|..+. + .++. ... + ..|.. .
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 1111 000 0 11211 0
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 514 LNIMIDVASALEYLHF----------GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 514 ~~i~~~i~~~l~~lH~----------~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
..+..++.+++++++. .....++|+|+++.||+++.++.+.++||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666652 0257899999999999998888999999998764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.89 E-value=0.0001 Score=72.38 Aligned_cols=76 Identities=14% Similarity=0.120 Sum_probs=61.0
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcC---CCcceeEEeeeecCCeEEEEEEccCC
Q 047705 418 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR---HRNLIKVISSCSNEEFKGLVLEYMPQ 494 (585)
Q Consensus 418 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 494 (585)
..+.++.|.+..+|+... ++..+++|+.... ....+..|++.|+.+. ...+++++.+....+..++||||++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 456799999999999986 4678889987643 2456788999888873 36788999988888889999999998
Q ss_pred CCH
Q 047705 495 GSL 497 (585)
Q Consensus 495 g~L 497 (585)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.75 E-value=3.7e-05 Score=64.95 Aligned_cols=63 Identities=24% Similarity=0.278 Sum_probs=49.8
Q ss_pred cEEeecccCcc-cccCccccCcCCCCEEeCCCCccCccCChhhccCCccceEEeecCcCeeeCCCC
Q 047705 254 EYLFLGYNRLQ-GLIPDSFGNLISLKFLNLSNNNLSGAIPASLEKLSYLEDLNLSFNKLEGEIPRG 318 (585)
Q Consensus 254 ~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 318 (585)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.|+|...
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 36777888876 23454433 46899999999999887788889999999999999999988753
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.68 E-value=0.00021 Score=69.48 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=56.8
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-C--CcceeEEeeeecCCeEEEEEEcc
Q 047705 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-H--RNLIKVISSCSNEEFKGLVLEYM 492 (585)
Q Consensus 416 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~e~~ 492 (585)
..-.+.+|.|..+.||+.+..+|+.|++|+...........+..|++.|+.+. . --+++++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 34467899999999999999999999999865443333345788999998884 2 2355666542 237899999
Q ss_pred CCCCH
Q 047705 493 PQGSL 497 (585)
Q Consensus 493 ~~g~L 497 (585)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.66 E-value=0.00014 Score=74.94 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=45.7
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEEechh----hh-----hHHHHHHHHHHHH-hcCCCcceeEEeeeecCCeEEE
Q 047705 418 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC----RR-----AFKSFDVECEIMK-SIRHRNLIKVISSCSNEEFKGL 487 (585)
Q Consensus 418 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~-----~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~l 487 (585)
..+.+|.|..+.||++.. +++.++||...... .. ....+..|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 356789999999999964 56789999432110 00 1223333333222 22334677777765 456789
Q ss_pred EEEcc-CC
Q 047705 488 VLEYM-PQ 494 (585)
Q Consensus 488 v~e~~-~~ 494 (585)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.64 E-value=0.00017 Score=71.40 Aligned_cols=158 Identities=14% Similarity=0.124 Sum_probs=88.6
Q ss_pred ccCHHHHHHhcCCCCc-----cceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc--ceeE
Q 047705 403 TFSYLELCRATDGFSE-----NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN--LIKV 475 (585)
Q Consensus 403 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 475 (585)
..+.+++......|.+ .+.++.|....+|++...+| .+++|+..... ....+..|+.+++.+...+ ++++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3455666666666654 34566788889999987655 67889876521 2234556777777663222 3344
Q ss_pred Eee------eecCCeEEEEEEccCCCCHHH--------------HhhcC----CCC----CC---HHHHHH---------
Q 047705 476 ISS------CSNEEFKGLVLEYMPQGSLEK--------------HLYST----NCI----LD---IFQRLN--------- 515 (585)
Q Consensus 476 ~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~----~~~----~~---~~~~~~--------- 515 (585)
+.. ....+..+++|+|++|..+.. .++.. ... .. |.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 322 122356789999999865321 01110 000 01 111000
Q ss_pred ---HHHHHHHHHHHHhc----CCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 516 ---IMIDVASALEYLHF----GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 516 ---i~~~i~~~l~~lH~----~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
+...+.+.+++++. ....+++|+|+.+.||++++++.+.++||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 00113344555542 1235789999999999998776668999988764
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.51 E-value=2.7e-05 Score=70.43 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=33.7
Q ss_pred ccCCCCccEEEeeCCccccccc----hhhhCCCCCceEEccCC---CCCcc----CcccccCCCCCcEEEcCCCccc
Q 047705 130 IGNLTNLITIDLGGNKLNGSIL----ITLSKLQKLQGLVLDDN---KLEGS----IPDDICRLVELYKLELGGNKLS 195 (585)
Q Consensus 130 ~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 195 (585)
+..-+.|++|+|+.|.|..... .++..-+.|++|+|++| .+... +.+.+..-+.|++|+++.|.+.
T Consensus 94 L~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 94 IETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3344556666666666653222 23334455666666654 22321 2233444556677777666553
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.47 E-value=0.00046 Score=68.63 Aligned_cols=139 Identities=12% Similarity=0.068 Sum_probs=74.1
Q ss_pred ceecccCceE-EEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCC--CcceeEEeeeecCCeEEEEEEccCCCC
Q 047705 420 NLIGRGGFGS-VYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRH--RNLIKVISSCSNEEFKGLVLEYMPQGS 496 (585)
Q Consensus 420 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 496 (585)
+.++.|+... +|+....+++.+++|...... ...+..|+.+++.+.. -.+++++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 677765446777777644321 1334557777776632 23566776643333 68999997766
Q ss_pred HHHHhhcCC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 047705 497 LEKHLYSTN-------------------------CILDIFQRL-------N-I------------MIDVASALEYLH--- 528 (585)
Q Consensus 497 L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~l~~lH--- 528 (585)
+.+++.... ..++..... . + ...+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654332110 011111100 0 0 001112222221
Q ss_pred cCCCCCcEEcCCCCCCEEeCCC----CcEEEeeeccccc
Q 047705 529 FGCSTPVIHCDLKPSNVLLDDN----MIAYLSDFGIAKL 563 (585)
Q Consensus 529 ~~~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~a~~ 563 (585)
......++|+|+.+.||+++.+ +.+.++||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125679999999999999874 6899999998875
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.45 E-value=0.00033 Score=68.61 Aligned_cols=74 Identities=9% Similarity=0.092 Sum_probs=46.6
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcc-eeEEeeeecCCeEEEEEEcc-C
Q 047705 416 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNL-IKVISSCSNEEFKGLVLEYM-P 493 (585)
Q Consensus 416 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 493 (585)
+.-.+.++.|....+|++ ..+++|+....... ......|+.+++.+...++ ++++++.. +.-++++||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCC
Confidence 344788999999999999 56888887643211 1223458877777642222 56665543 3346899999 6
Q ss_pred CCCH
Q 047705 494 QGSL 497 (585)
Q Consensus 494 ~g~L 497 (585)
|.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6544
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.41 E-value=0.00025 Score=59.74 Aligned_cols=56 Identities=27% Similarity=0.310 Sum_probs=45.2
Q ss_pred CEEecCCCcCC--CcCCccccCCCCCccEEEccCCCCCCCccCccccCCCCCcEEEccCCCCc
Q 047705 37 KLLGLQDNSLS--GSLSSITDVRLPNLEELVLWGNNFSELNFLSSLSNCKSLTVIGLSNNPLD 97 (585)
Q Consensus 37 ~~L~L~~n~l~--~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 97 (585)
..++-+++.++ ..+..+ .++|++|+|++|+|+.++. +.|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l----p~~l~~L~Ls~N~l~~l~~-~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF----PVDTTELVLTGNNLTALPP-GLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC----CTTCSEEECTTSCCSSCCT-TTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC----CcCCCEEECCCCcCCccCh-hhhhhccccCEEEecCCCee
Confidence 37788888886 444332 3579999999999999987 88999999999999999885
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.41 E-value=3.8e-05 Score=69.38 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=59.3
Q ss_pred ccCCCCCcEEEccCC-CCcccCCcchhhcccccccEEEeecCcceecCCccccCCCCccEEEeeCCcccccc----chhh
Q 047705 80 LSNCKSLTVIGLSNN-PLDGILPKTSIGNLSHSLEDFQMHNCNVTGDIPEEIGNLTNLITIDLGGNKLNGSI----LITL 154 (585)
Q Consensus 80 ~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~ 154 (585)
+..-++|++|+|++| +|.... .. .+.+++..-+.|+.|+|++|+|...- ..++
T Consensus 37 l~~n~~L~~L~L~~nn~igd~g----a~------------------~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL 94 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKER----IR------------------SLIEAACNSKHIEKFSLANTAISDSEARGLIELI 94 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHH----HH------------------HHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHH----HH------------------HHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHH
Confidence 445567777887774 664221 11 12345566688899999999987533 3444
Q ss_pred hCCCCCceEEccCCCCCccCc----ccccCCCCCcEEEcCCC
Q 047705 155 SKLQKLQGLVLDDNKLEGSIP----DDICRLVELYKLELGGN 192 (585)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N 192 (585)
..-+.|++|+|++|.|+.... +.+..-+.|++|+|++|
T Consensus 95 ~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 95 ETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred hcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 567789999999999885433 23444566888888765
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.40 E-value=0.00073 Score=66.91 Aligned_cols=140 Identities=12% Similarity=0.085 Sum_probs=81.0
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEEechhhhhHHHHHHHHHHHHhcCCC--cceeEEee-----eecCCeEEEEEEcc
Q 047705 420 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHR--NLIKVISS-----CSNEEFKGLVLEYM 492 (585)
Q Consensus 420 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~ 492 (585)
+.++ |....||++...+|+.+++|+..... .....+..|..+++.+... .+++++.. ....+..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4576 88889999887677789999986431 1234566788887777422 23444443 12245668999999
Q ss_pred CCCCHH-----HH---------hhc----CC----CCCCHHHH----------------------HHHHHHHHHHHHHHh
Q 047705 493 PQGSLE-----KH---------LYS----TN----CILDIFQR----------------------LNIMIDVASALEYLH 528 (585)
Q Consensus 493 ~~g~L~-----~~---------l~~----~~----~~~~~~~~----------------------~~i~~~i~~~l~~lH 528 (585)
+|..+. .. ++. .. ...++... ...+.+++..++-.-
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 885432 10 110 00 01111110 011111222222111
Q ss_pred c-CCCCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 529 F-GCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 529 ~-~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0 1245689999999999999 4 899999988764
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.25 E-value=0.00054 Score=70.68 Aligned_cols=73 Identities=22% Similarity=0.247 Sum_probs=49.7
Q ss_pred cceecccCceEEEEEEeCC--------CcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc-ceeEEeeeecCCeEEEEE
Q 047705 419 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN-LIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 489 (585)
.+.|+.|....+|++...+ ++.+++|+..... ....+..|..+++.+...+ .+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4578888889999998653 5789999874321 1134557888888874333 3677776542 3899
Q ss_pred EccCCCCH
Q 047705 490 EYMPQGSL 497 (585)
Q Consensus 490 e~~~~g~L 497 (585)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.24 E-value=0.00067 Score=68.45 Aligned_cols=140 Identities=14% Similarity=0.177 Sum_probs=82.7
Q ss_pred cceecccCceEEEEEEeC--------CCcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCCeEEEEE
Q 047705 419 NNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 489 (585)
.+.+..|-...+|++... +++.+++|+.... ........+|.++++.+. +.-.+++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888899999864 2478999986332 123455668999988774 3233677776653 2899
Q ss_pred EccCCCCHHHH-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 047705 490 EYMPQGSLEKH-----------------LYSTN----CILD--IFQRLNIMIDVAS-------------------ALEYL 527 (585)
Q Consensus 490 e~~~~g~L~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~l~~l 527 (585)
||++|.++... ++... .... +.++.++..++.. .++++
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998654311 11111 1111 3344444443321 23333
Q ss_pred h-----cCCCCCcEEcCCCCCCEEeCCC----CcEEEeeeccccc
Q 047705 528 H-----FGCSTPVIHCDLKPSNVLLDDN----MIAYLSDFGIAKL 563 (585)
Q Consensus 528 H-----~~~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~a~~ 563 (585)
. ......++|+|+.+.||+++++ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1124568999999999999876 7899999998764
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.17 E-value=0.0016 Score=67.48 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=48.6
Q ss_pred cceecccCceEEEEEEeCC-CcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCcc-eeEEeeeecCCeEEEEEEccCCCC
Q 047705 419 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRNL-IKVISSCSNEEFKGLVLEYMPQGS 496 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 496 (585)
.+.|+.|-...+|++...+ +..+++|+....... .-.-..|..+++.+...++ +++++.+. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678888889999998765 578889987543211 1122568999998864444 67777763 2 25999998854
Q ss_pred H
Q 047705 497 L 497 (585)
Q Consensus 497 L 497 (585)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.01 E-value=0.0011 Score=66.98 Aligned_cols=74 Identities=14% Similarity=0.227 Sum_probs=45.0
Q ss_pred cceecccCceEEEEEEeCC---------CcEEEEEEEechhhhhHHHHHHHHHHHHhcCCCc-ceeEEeeeecCCeEEEE
Q 047705 419 NNLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCRRAFKSFDVECEIMKSIRHRN-LIKVISSCSNEEFKGLV 488 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 488 (585)
.+.++.|....+|++...+ ++.+++|+...... .......|.++++.+...+ .+++++.+ . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3567788888999998653 26788888654322 1123456888888774333 45676654 2 2689
Q ss_pred EEccCCCCH
Q 047705 489 LEYMPQGSL 497 (585)
Q Consensus 489 ~e~~~~g~L 497 (585)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.79 E-value=0.0066 Score=60.34 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=28.2
Q ss_pred CCCcEEcCCCCCCEEeCCCCcEEEeeeccccc
Q 047705 532 STPVIHCDLKPSNVLLDDNMIAYLSDFGIAKL 563 (585)
Q Consensus 532 ~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~~ 563 (585)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35789999999999999888899999987764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.62 E-value=0.0066 Score=61.45 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=82.5
Q ss_pred ceecccCceEEEEEEeCC--------CcEEEEEEEechhhh-----------h-------HHHHHHHHHHHHhcC-CCcc
Q 047705 420 NLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCRR-----------A-------FKSFDVECEIMKSIR-HRNL 472 (585)
Q Consensus 420 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~ni 472 (585)
+.+..|-...+|++...+ .+.|.+++.-..... . .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567668888999998653 367888887543211 0 112335888888874 4445
Q ss_pred eeEEeeeecCCeEEEEEEccCCCCHHHH-----------------hhcCC----CCCC--HHHHHHHHHHHH--------
Q 047705 473 IKVISSCSNEEFKGLVLEYMPQGSLEKH-----------------LYSTN----CILD--IFQRLNIMIDVA-------- 521 (585)
Q Consensus 473 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~-------- 521 (585)
+++++++.. .+|+||++|.+|... ++... .... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 678877643 289999997554211 11111 1111 223333333221
Q ss_pred --------------HHHHH----Hh-cCCCCCcEEcCCCCCCEEeCCC------CcEEEeeeccccc
Q 047705 522 --------------SALEY----LH-FGCSTPVIHCDLKPSNVLLDDN------MIAYLSDFGIAKL 563 (585)
Q Consensus 522 --------------~~l~~----lH-~~~~~~iiH~dlkp~NIll~~~------~~~kl~Dfg~a~~ 563 (585)
+-+.+ +. ......++|+|+.+.||+++++ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11222 22 1224568999999999999876 7899999988764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.03 E-value=0.013 Score=59.91 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=48.4
Q ss_pred cceecccCceEEEEEEeCC--------CcEEEEEEEechhhhhHHHHHHHHHHHHhcC-CCcceeEEeeeecCCeEEEEE
Q 047705 419 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCRRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKGLVL 489 (585)
Q Consensus 419 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 489 (585)
.+.+..|-...+|++...+ ++.+++|+...... ..-+-.+|..+++.+. +.-.+++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567778888999998653 57899998643321 1123356888888774 333456665442 27899
Q ss_pred EccCCCCH
Q 047705 490 EYMPQGSL 497 (585)
Q Consensus 490 e~~~~g~L 497 (585)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.62 E-value=0.3 Score=49.49 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=25.3
Q ss_pred CcEEcCCCCCCEEe------CCCCcEEEeeeccccc
Q 047705 534 PVIHCDLKPSNVLL------DDNMIAYLSDFGIAKL 563 (585)
Q Consensus 534 ~iiH~dlkp~NIll------~~~~~~kl~Dfg~a~~ 563 (585)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999988764
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.25 E-value=3.6 Score=37.25 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=62.4
Q ss_pred CCCcceeEEeeeecCCeEEEEEEccCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCcEEcCCCCCCEE
Q 047705 468 RHRNLIKVISSCSNEEFKGLVLEYMPQGSLEKHLYSTNCILDIFQRLNIMIDVASALE-YLHFGCSTPVIHCDLKPSNVL 546 (585)
Q Consensus 468 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~lH~~~~~~iiH~dlkp~NIl 546 (585)
.||.+ -..+-.+++.+.+.++.-+++-=...++ ..+....++++..|+...+ +++ .-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57877 3444467777777777654433333343 3567778888888877766 444 5578889999999
Q ss_pred eCCCCcEEEeeeccccccc
Q 047705 547 LDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 547 l~~~~~~kl~Dfg~a~~~~ 565 (585)
++.++.+++.-.|+-..+.
T Consensus 117 f~~~~~p~i~hRGi~~~lp 135 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESLP 135 (219)
T ss_dssp ECTTCCEEESCCEETTTBS
T ss_pred EeCCCcEEEEEcCCcccCC
Confidence 9999999999999866553
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.38 E-value=0.72 Score=29.80 Aligned_cols=22 Identities=27% Similarity=0.301 Sum_probs=8.5
Q ss_pred eecchhhhhhhHHh-hhhhhhhc
Q 047705 363 IVLPLSTTLMIVVI-WLILRYRQ 384 (585)
Q Consensus 363 ~~~~~~~~~~~~~~-~~~~r~~~ 384 (585)
++.+++.++++++. |+++|+|+
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHHHhhhhH
Confidence 33334443333333 44444433
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.70 E-value=3.4 Score=37.28 Aligned_cols=87 Identities=7% Similarity=0.117 Sum_probs=62.6
Q ss_pred CCCcceeEEeeeecCCeEEEEEEccCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEE
Q 047705 468 RHRNLIKVISSCSNEEFKGLVLEYMPQG-SLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVL 546 (585)
Q Consensus 468 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIl 546 (585)
.||+.+.. .+-..++.+.+.++.-+.+ +... ++ ..+....++++..|+...++++ .=+|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 57888865 4556667666666654322 2222 32 3567788889999988886555 3478899999999
Q ss_pred eCCCCcEEEeeeccccccc
Q 047705 547 LDDNMIAYLSDFGIAKLLI 565 (585)
Q Consensus 547 l~~~~~~kl~Dfg~a~~~~ 565 (585)
++.++.+++.-.|+...+.
T Consensus 112 f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp ECTTSCEEESCCEETTTBS
T ss_pred EcCCCCEEEEEccCccCCC
Confidence 9999999999999865543
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.32 E-value=0.21 Score=51.55 Aligned_cols=60 Identities=8% Similarity=0.055 Sum_probs=17.1
Q ss_pred CccceecccCceEEEEEEeCC-CcEEEE------EEEech--hhhhHHHHHHHHHHHHhcCCCcceeEEeee
Q 047705 417 SENNLIGRGGFGSVYKARLGD-GMEVAV------KVFNLQ--CRRAFKSFDVECEIMKSIRHRNLIKVISSC 479 (585)
Q Consensus 417 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 479 (585)
.+.+.+| ||.||+|.+.. ..+||+ |..+.. .......+.+|+.+++.++|||+++.+++-
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3445666 99999998753 467888 655432 122335677899999999999999987764
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.17 E-value=4.9 Score=31.32 Aligned_cols=48 Identities=19% Similarity=0.054 Sum_probs=34.0
Q ss_pred CcceecCCccccCCCCccEEEeeCCccccccchhhhCCCCCceEEccCC
Q 047705 120 CNVTGDIPEEIGNLTNLITIDLGGNKLNGSILITLSKLQKLQGLVLDDN 168 (585)
Q Consensus 120 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 168 (585)
..++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455566677888888888888653 55566777888888888877654
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=70.71 E-value=10 Score=29.51 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=28.0
Q ss_pred cccccCCcccCCCCCCcEEeecccCcccccCccccCcCCCCEEeCCCC
Q 047705 238 NFSGIIPKEIGGLKNLEYLFLGYNRLQGLIPDSFGNLISLKFLNLSNN 285 (585)
Q Consensus 238 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 285 (585)
.++.+...+|.++.+|+.+.|..+ ++.+...+|.+|.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445555566666666666666554 34455566666666666666544
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.81 E-value=1.3 Score=28.55 Aligned_cols=9 Identities=11% Similarity=0.227 Sum_probs=3.8
Q ss_pred hhhhhhhhc
Q 047705 376 IWLILRYRQ 384 (585)
Q Consensus 376 ~~~~~r~~~ 384 (585)
.|+++|+|+
T Consensus 30 ~~~~~RRRr 38 (44)
T 2l2t_A 30 FAVYVRRKS 38 (44)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhhhh
Confidence 344444443
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.43 E-value=1.8 Score=27.81 Aligned_cols=10 Identities=10% Similarity=0.275 Sum_probs=4.8
Q ss_pred eeeeecchhh
Q 047705 360 LLGIVLPLST 369 (585)
Q Consensus 360 ~~~~~~~~~~ 369 (585)
++++++++++
T Consensus 14 Ia~~vVGvll 23 (44)
T 2jwa_A 14 IISAVVGILL 23 (44)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 4455555443
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=58.44 E-value=2 Score=27.69 Aligned_cols=15 Identities=20% Similarity=0.073 Sum_probs=8.9
Q ss_pred HhhhhhhhhcCCCCC
Q 047705 375 VIWLILRYRQRGKQP 389 (585)
Q Consensus 375 ~~~~~~r~~~~~~~~ 389 (585)
+....+.+.|++++.
T Consensus 26 i~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 26 VGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHTTCSS
T ss_pred HHHHHHHHhhhhhhh
Confidence 345556666666654
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=48.14 E-value=4.7 Score=25.10 Aligned_cols=16 Identities=6% Similarity=0.052 Sum_probs=9.4
Q ss_pred ceeeeeeecchhhhhh
Q 047705 357 ISLLLGIVLPLSTTLM 372 (585)
Q Consensus 357 ~~~~~~~~~~~~~~~~ 372 (585)
.+.+.+++++.+++++
T Consensus 10 ~GaIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHH
Confidence 4456666776655443
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=43.33 E-value=44 Score=32.21 Aligned_cols=76 Identities=18% Similarity=0.169 Sum_probs=40.6
Q ss_pred eEEEEEEccCCCCHHHHhhcC-CCCCCHHHHHHHHHHHH--HHHHH-HhcCCCCCcEE-cCCCCCCEEeCCCC-cEEEee
Q 047705 484 FKGLVLEYMPQGSLEKHLYST-NCILDIFQRLNIMIDVA--SALEY-LHFGCSTPVIH-CDLKPSNVLLDDNM-IAYLSD 557 (585)
Q Consensus 484 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~--~~l~~-lH~~~~~~iiH-~dlkp~NIll~~~~-~~kl~D 557 (585)
...++|||.+|..|.+.-... ...+.. +.+.++. -++.+ ++.....+.+. ..-.++|||+++++ .+.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 456999999876554421110 001222 2233332 23333 44332222221 12478999997654 599999
Q ss_pred eccccc
Q 047705 558 FGIAKL 563 (585)
Q Consensus 558 fg~a~~ 563 (585)
-+.|..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 999864
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=40.37 E-value=3.5e+02 Score=28.43 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 510 IFQRLNIMIDVA--SALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 510 ~~~~~~i~~~i~--~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
+..+..++...| ..+.|+= || +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 334445555443 4556665 33 5777999999999999999999874
No 459
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=35.85 E-value=46 Score=30.03 Aligned_cols=61 Identities=15% Similarity=-0.019 Sum_probs=46.1
Q ss_pred CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEee
Q 047705 495 GSLEKHLYSTNCILDIFQRLNIMIDVASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSD 557 (585)
Q Consensus 495 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~D 557 (585)
-+|.+.++..+.++++.++|.++.|.+.+|.-+-. .+.-..+=+.|..|++..+|.|...+
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc
Confidence 37999999988899999999999999999887620 00101223346889999999988774
No 460
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=24.12 E-value=39 Score=36.23 Aligned_cols=44 Identities=25% Similarity=0.243 Sum_probs=31.9
Q ss_pred HHHHHHHHH--HHHHHHHhcCCCCCcEEcCCCCCCEEeCCCCcEEEeeecccc
Q 047705 512 QRLNIMIDV--ASALEYLHFGCSTPVIHCDLKPSNVLLDDNMIAYLSDFGIAK 562 (585)
Q Consensus 512 ~~~~i~~~i--~~~l~~lH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~a~ 562 (585)
.+..++..+ ...+.|+= || +|=.++|||++.+|++.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 344454443 34555655 33 6888999999999999999999864
Done!