Query 047713
Match_columns 329
No_of_seqs 146 out of 1626
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 13:55:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047713.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047713hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 6E-55 1.3E-59 372.3 27.7 320 5-327 46-366 (366)
2 KOG0022 Alcohol dehydrogenase, 100.0 3.2E-54 7E-59 361.9 27.9 324 4-327 52-375 (375)
3 COG1064 AdhP Zn-dependent alco 100.0 3.6E-53 7.7E-58 369.3 26.3 282 10-328 54-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.3E-49 2.8E-54 336.7 25.0 290 12-329 60-354 (354)
5 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.1E-46 6.6E-51 341.7 30.9 316 11-327 53-368 (368)
6 cd08301 alcohol_DH_plants Plan 100.0 2.8E-46 6E-51 342.5 30.2 315 10-325 53-368 (369)
7 PLN02827 Alcohol dehydrogenase 100.0 6.1E-46 1.3E-50 340.5 30.3 316 12-328 62-377 (378)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 1E-45 2.2E-50 338.9 30.5 310 12-325 60-370 (371)
9 cd08300 alcohol_DH_class_III c 100.0 1.2E-45 2.6E-50 338.0 30.4 314 12-326 55-368 (368)
10 PLN02740 Alcohol dehydrogenase 100.0 2.8E-45 6.1E-50 336.8 30.1 316 12-327 64-381 (381)
11 KOG0023 Alcohol dehydrogenase, 100.0 2.3E-45 5E-50 310.1 24.5 289 11-328 63-355 (360)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.5E-44 3.3E-49 329.6 28.8 303 12-326 53-357 (358)
13 cd08239 THR_DH_like L-threonin 100.0 3.4E-44 7.3E-49 325.2 28.1 286 12-327 53-339 (339)
14 cd08277 liver_alcohol_DH_like 100.0 1E-43 2.2E-48 325.0 30.2 313 11-326 53-365 (365)
15 COG1063 Tdh Threonine dehydrog 100.0 3.2E-43 7E-48 317.9 28.2 293 11-327 52-350 (350)
16 PRK09880 L-idonate 5-dehydroge 100.0 4.9E-43 1.1E-47 317.9 27.7 286 11-327 57-343 (343)
17 TIGR02819 fdhA_non_GSH formald 100.0 8.9E-42 1.9E-46 313.6 26.9 297 12-328 60-391 (393)
18 PRK10309 galactitol-1-phosphat 100.0 2.8E-41 6.1E-46 307.0 28.4 289 12-328 52-347 (347)
19 TIGR03201 dearomat_had 6-hydro 100.0 3.6E-41 7.8E-46 306.3 28.2 285 11-326 51-348 (349)
20 TIGR03366 HpnZ_proposed putati 100.0 6.1E-42 1.3E-46 302.0 22.2 269 16-308 1-280 (280)
21 PLN02586 probable cinnamyl alc 100.0 3.4E-41 7.3E-46 307.3 25.8 286 12-327 65-353 (360)
22 COG0604 Qor NADPH:quinone redu 100.0 3.5E-41 7.6E-46 300.8 23.2 263 12-327 56-326 (326)
23 cd05279 Zn_ADH1 Liver alcohol 100.0 4.4E-40 9.5E-45 300.9 29.5 313 12-326 52-365 (365)
24 cd08299 alcohol_DH_class_I_II_ 100.0 5.5E-40 1.2E-44 300.8 30.1 314 12-327 59-373 (373)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.7E-40 3.7E-45 303.7 26.4 286 12-327 59-348 (375)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.4E-40 5.3E-45 298.2 25.9 271 12-325 55-328 (329)
27 KOG1197 Predicted quinone oxid 100.0 6E-41 1.3E-45 273.9 18.3 268 5-328 54-331 (336)
28 cd08231 MDR_TM0436_like Hypoth 100.0 2.5E-39 5.4E-44 295.8 28.3 298 11-327 52-361 (361)
29 cd08233 butanediol_DH_like (2R 100.0 6E-39 1.3E-43 292.2 28.6 285 12-326 63-351 (351)
30 cd08230 glucose_DH Glucose deh 100.0 4.1E-39 8.8E-44 293.6 26.2 282 12-327 56-355 (355)
31 PLN02514 cinnamyl-alcohol dehy 100.0 2.2E-38 4.7E-43 288.8 25.8 287 12-328 62-351 (357)
32 cd08278 benzyl_alcohol_DH Benz 100.0 1.9E-37 4.2E-42 283.5 29.1 310 12-326 54-365 (365)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 5.4E-37 1.2E-41 279.3 28.8 291 12-327 52-351 (351)
34 cd08279 Zn_ADH_class_III Class 100.0 4.2E-36 9.1E-41 274.6 30.0 309 12-325 52-362 (363)
35 PRK10083 putative oxidoreducta 100.0 4.8E-36 1E-40 271.8 28.2 284 12-329 52-339 (339)
36 cd08237 ribitol-5-phosphate_DH 100.0 6E-37 1.3E-41 277.5 22.3 271 12-328 57-340 (341)
37 cd05278 FDH_like Formaldehyde 100.0 5E-36 1.1E-40 272.5 28.3 290 11-326 52-346 (347)
38 cd08283 FDH_like_1 Glutathione 100.0 4.9E-36 1.1E-40 276.1 28.0 305 12-326 53-385 (386)
39 cd08238 sorbose_phosphate_red 100.0 4E-36 8.7E-41 278.5 26.3 279 12-328 61-369 (410)
40 cd08296 CAD_like Cinnamyl alco 100.0 9.4E-36 2E-40 269.2 27.1 278 12-326 53-333 (333)
41 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.8E-35 3.9E-40 269.2 28.7 285 12-325 61-350 (350)
42 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.5E-35 3.2E-40 272.8 28.4 289 11-325 85-383 (384)
43 cd05284 arabinose_DH_like D-ar 100.0 1.8E-35 3.8E-40 268.2 27.2 280 12-326 56-339 (340)
44 cd05285 sorbitol_DH Sorbitol d 100.0 2.4E-35 5.3E-40 267.6 27.1 285 12-325 53-341 (343)
45 cd08284 FDH_like_2 Glutathione 100.0 2.5E-35 5.3E-40 267.7 26.9 289 12-326 52-343 (344)
46 PRK05396 tdh L-threonine 3-deh 100.0 8.7E-35 1.9E-39 263.8 28.3 285 12-328 56-341 (341)
47 cd08246 crotonyl_coA_red croto 100.0 5.3E-35 1.2E-39 270.1 26.9 283 14-326 82-392 (393)
48 cd08286 FDH_like_ADH2 formalde 100.0 8.3E-35 1.8E-39 264.3 27.6 287 12-327 53-345 (345)
49 PLN02702 L-idonate 5-dehydroge 100.0 9E-35 1.9E-39 266.0 27.8 286 12-326 72-363 (364)
50 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1E-34 2.2E-39 263.7 27.9 285 12-325 53-343 (345)
51 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.2E-34 2.7E-39 263.7 27.1 284 12-326 65-349 (350)
52 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.4E-34 3.1E-39 264.9 26.8 307 12-326 52-367 (367)
53 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.9E-35 1.3E-39 260.9 22.6 251 12-326 57-308 (308)
54 cd08287 FDH_like_ADH3 formalde 100.0 3.6E-34 7.8E-39 260.2 27.0 284 12-326 52-344 (345)
55 PLN03154 putative allyl alcoho 100.0 1.5E-34 3.2E-39 262.4 24.2 259 12-328 71-346 (348)
56 TIGR01751 crot-CoA-red crotony 100.0 4.2E-34 9.1E-39 264.4 27.6 285 15-328 79-388 (398)
57 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.6E-34 1.2E-38 258.5 27.5 275 12-326 62-341 (341)
58 TIGR00692 tdh L-threonine 3-de 100.0 9.2E-34 2E-38 257.0 28.8 286 12-327 54-340 (340)
59 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.1E-33 2.3E-38 256.2 28.2 283 12-327 52-337 (337)
60 cd05281 TDH Threonine dehydrog 100.0 1.6E-33 3.6E-38 255.4 28.3 284 12-326 56-340 (341)
61 cd08235 iditol_2_DH_like L-idi 100.0 1.9E-33 4.1E-38 255.2 28.3 285 11-325 51-342 (343)
62 cd08232 idonate-5-DH L-idonate 100.0 1.4E-33 3.1E-38 255.7 26.8 285 12-327 52-339 (339)
63 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2E-33 4.3E-38 254.4 27.6 282 12-327 55-338 (338)
64 cd08282 PFDH_like Pseudomonas 100.0 1.5E-33 3.2E-38 258.7 27.1 295 12-326 52-374 (375)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 3.6E-33 7.7E-38 252.8 25.7 285 11-326 51-337 (337)
66 PRK09422 ethanol-active dehydr 100.0 5E-33 1.1E-37 252.0 26.4 282 13-328 53-337 (338)
67 cd08291 ETR_like_1 2-enoyl thi 100.0 4.3E-33 9.2E-38 251.0 25.4 258 11-326 58-324 (324)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 1E-32 2.2E-37 250.3 27.7 282 12-327 55-341 (341)
69 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.8E-33 8.3E-38 251.4 23.7 267 12-321 53-321 (325)
70 cd08293 PTGR2 Prostaglandin re 100.0 7.8E-33 1.7E-37 251.4 25.8 260 11-327 66-345 (345)
71 PRK13771 putative alcohol dehy 100.0 6E-33 1.3E-37 251.0 24.4 277 12-327 53-333 (334)
72 cd08236 sugar_DH NAD(P)-depend 100.0 2.5E-32 5.4E-37 247.9 28.3 286 12-325 51-343 (343)
73 cd08242 MDR_like Medium chain 100.0 2.9E-32 6.2E-37 245.0 26.0 269 13-326 50-318 (319)
74 cd08266 Zn_ADH_like1 Alcohol d 100.0 3E-32 6.4E-37 246.7 25.7 282 12-326 56-341 (342)
75 TIGR02825 B4_12hDH leukotriene 100.0 3.3E-32 7.1E-37 245.3 23.5 253 12-325 56-324 (325)
76 cd08234 threonine_DH_like L-th 100.0 1.4E-31 3.1E-36 242.0 27.3 281 12-325 51-333 (334)
77 cd08259 Zn_ADH5 Alcohol dehydr 100.0 8.3E-32 1.8E-36 243.1 25.5 277 12-326 53-332 (332)
78 cd08292 ETR_like_2 2-enoyl thi 100.0 1.2E-31 2.5E-36 241.5 25.9 257 11-325 56-323 (324)
79 cd08274 MDR9 Medium chain dehy 100.0 9.6E-32 2.1E-36 244.7 25.6 272 10-326 74-349 (350)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 1.2E-31 2.5E-36 242.1 25.1 270 12-324 57-328 (329)
81 cd08245 CAD Cinnamyl alcohol d 100.0 2.2E-31 4.7E-36 240.5 25.3 277 12-325 52-330 (330)
82 cd08295 double_bond_reductase_ 100.0 1.3E-31 2.9E-36 242.6 23.9 258 12-327 66-338 (338)
83 KOG0025 Zn2+-binding dehydroge 100.0 3.9E-31 8.4E-36 220.3 23.1 271 4-328 68-353 (354)
84 cd08294 leukotriene_B4_DH_like 100.0 1.6E-31 3.4E-36 241.2 22.5 254 12-327 58-329 (329)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.4E-30 5.2E-35 231.1 24.7 248 12-291 54-306 (306)
86 cd05188 MDR Medium chain reduc 100.0 1.4E-30 3E-35 228.1 22.5 243 11-287 27-270 (271)
87 cd08276 MDR7 Medium chain dehy 100.0 7.6E-30 1.6E-34 230.6 27.5 277 12-326 56-335 (336)
88 cd08290 ETR 2-enoyl thioester 100.0 5.6E-30 1.2E-34 232.3 23.9 259 13-327 63-341 (341)
89 cd05282 ETR_like 2-enoyl thioe 100.0 8.2E-30 1.8E-34 229.3 24.1 258 11-325 54-322 (323)
90 cd08244 MDR_enoyl_red Possible 100.0 1.5E-29 3.2E-34 227.7 25.1 260 11-326 57-323 (324)
91 KOG1198 Zinc-binding oxidoredu 100.0 2.9E-30 6.3E-35 230.7 20.0 224 96-328 103-346 (347)
92 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.6E-29 5.5E-34 225.0 25.9 256 12-325 50-311 (312)
93 COG2130 Putative NADP-dependen 100.0 1E-29 2.2E-34 213.8 21.1 258 13-329 67-340 (340)
94 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.7E-29 3.7E-34 228.6 24.2 258 12-326 57-334 (336)
95 cd08255 2-desacetyl-2-hydroxye 100.0 3.6E-29 7.9E-34 220.4 23.1 246 12-325 19-277 (277)
96 PRK10754 quinone oxidoreductas 100.0 2.5E-29 5.4E-34 226.7 21.8 261 12-326 56-326 (327)
97 cd08249 enoyl_reductase_like e 100.0 8E-29 1.7E-33 224.5 24.1 264 12-327 53-339 (339)
98 cd08250 Mgc45594_like Mgc45594 100.0 5.8E-29 1.3E-33 224.5 23.1 259 11-326 58-329 (329)
99 PTZ00354 alcohol dehydrogenase 100.0 1E-28 2.2E-33 223.1 24.1 262 12-328 57-329 (334)
100 cd08270 MDR4 Medium chain dehy 100.0 4.1E-28 8.9E-33 216.5 22.5 249 13-327 51-305 (305)
101 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-27 2.5E-32 215.5 25.2 259 12-327 56-325 (325)
102 cd08243 quinone_oxidoreductase 100.0 5.7E-28 1.2E-32 216.8 22.7 259 12-325 55-319 (320)
103 cd08251 polyketide_synthase po 100.0 2E-27 4.3E-32 211.4 25.3 259 11-324 35-302 (303)
104 cd08289 MDR_yhfp_like Yhfp put 100.0 2.1E-27 4.5E-32 214.0 24.7 262 12-327 56-326 (326)
105 cd05286 QOR2 Quinone oxidoredu 100.0 3.3E-27 7.2E-32 211.3 24.7 258 12-326 53-319 (320)
106 cd08252 AL_MDR Arginate lyase 100.0 5.2E-27 1.1E-31 212.3 25.3 260 12-325 58-335 (336)
107 smart00829 PKS_ER Enoylreducta 100.0 3.2E-27 7E-32 208.2 22.2 255 13-324 23-287 (288)
108 cd05288 PGDH Prostaglandin deh 100.0 2.3E-27 4.9E-32 214.1 21.5 250 14-324 65-328 (329)
109 TIGR02823 oxido_YhdH putative 100.0 9.5E-27 2E-31 209.5 25.3 261 11-327 54-323 (323)
110 cd05195 enoyl_red enoyl reduct 100.0 4E-27 8.7E-32 207.9 22.3 257 11-324 25-292 (293)
111 cd08247 AST1_like AST1 is a cy 100.0 1.3E-26 2.8E-31 211.2 24.3 265 13-327 58-352 (352)
112 cd08253 zeta_crystallin Zeta-c 100.0 2.6E-26 5.5E-31 206.1 25.3 264 11-326 55-324 (325)
113 cd05276 p53_inducible_oxidored 100.0 1.8E-26 3.9E-31 206.8 24.0 257 11-324 55-322 (323)
114 KOG1202 Animal-type fatty acid 100.0 8.2E-28 1.8E-32 229.8 15.0 226 98-328 1506-1742(2376)
115 cd08248 RTN4I1 Human Reticulon 100.0 5.3E-27 1.1E-31 213.5 19.8 257 11-325 71-349 (350)
116 cd08268 MDR2 Medium chain dehy 100.0 2.9E-26 6.3E-31 206.1 24.1 263 12-326 56-327 (328)
117 cd08273 MDR8 Medium chain dehy 100.0 2.5E-26 5.4E-31 207.4 22.4 254 12-325 56-330 (331)
118 TIGR02824 quinone_pig3 putativ 99.9 7.3E-26 1.6E-30 203.3 25.1 259 12-327 56-325 (325)
119 cd08288 MDR_yhdh Yhdh putative 99.9 1.4E-25 3.1E-30 201.9 24.9 261 11-327 55-324 (324)
120 cd08272 MDR6 Medium chain dehy 99.9 1.5E-25 3.3E-30 201.4 23.2 259 12-327 56-326 (326)
121 cd08241 QOR1 Quinone oxidoredu 99.9 2.6E-25 5.7E-30 199.4 24.0 257 12-325 56-322 (323)
122 cd08275 MDR3 Medium chain dehy 99.9 5.8E-25 1.3E-29 198.7 26.0 260 11-327 54-337 (337)
123 cd08271 MDR5 Medium chain dehy 99.9 2.6E-25 5.6E-30 200.0 22.5 260 13-326 56-324 (325)
124 cd08267 MDR1 Medium chain dehy 99.9 2.6E-25 5.6E-30 199.4 22.3 255 12-324 57-318 (319)
125 cd05289 MDR_like_2 alcohol deh 99.9 6.5E-25 1.4E-29 195.7 21.1 248 12-324 58-308 (309)
126 KOG1196 Predicted NAD-dependen 99.9 2.9E-24 6.4E-29 180.4 20.2 249 20-328 78-341 (343)
127 PF00107 ADH_zinc_N: Zinc-bind 99.7 2.6E-17 5.6E-22 128.1 10.8 128 155-289 1-129 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 7.2E-18 1.6E-22 127.0 5.3 83 9-113 27-109 (109)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 8.8E-12 1.9E-16 113.7 15.2 174 134-327 190-376 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 7.2E-11 1.6E-15 110.5 15.3 154 141-300 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 7.7E-12 1.7E-16 96.7 0.9 120 188-325 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.7 1.7E-07 3.7E-12 82.3 10.6 165 139-319 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 1.8E-06 3.9E-11 81.0 11.7 105 143-249 162-287 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.2 2.4E-05 5.1E-10 72.2 12.7 103 133-250 199-303 (425)
135 PRK08306 dipicolinate synthase 98.1 6.6E-05 1.4E-09 66.5 13.6 96 144-251 151-246 (296)
136 TIGR01035 hemA glutamyl-tRNA r 98.1 1.7E-07 3.7E-12 87.0 -3.9 160 16-227 89-253 (417)
137 TIGR00936 ahcY adenosylhomocys 98.0 7.5E-05 1.6E-09 68.5 12.3 92 143-249 193-285 (406)
138 PRK00517 prmA ribosomal protei 98.0 0.00013 2.8E-09 63.2 12.5 132 98-247 78-214 (250)
139 PLN02494 adenosylhomocysteinas 97.9 0.00013 2.8E-09 67.6 11.9 92 143-249 252-344 (477)
140 COG2518 Pcm Protein-L-isoaspar 97.9 3.7E-05 8.1E-10 63.3 6.7 112 123-247 53-170 (209)
141 cd05213 NAD_bind_Glutamyl_tRNA 97.8 5.3E-05 1.1E-09 67.7 6.9 107 109-227 140-251 (311)
142 PRK08324 short chain dehydroge 97.8 0.00021 4.7E-09 70.9 11.6 113 98-223 386-507 (681)
143 PF11017 DUF2855: Protein of u 97.7 0.002 4.3E-08 56.8 14.9 187 23-250 39-235 (314)
144 PRK12771 putative glutamate sy 97.7 4.5E-05 9.8E-10 74.0 5.2 81 141-227 133-235 (564)
145 TIGR00518 alaDH alanine dehydr 97.6 0.00046 9.9E-09 63.2 10.5 96 145-248 167-269 (370)
146 TIGR02853 spore_dpaA dipicolin 97.6 0.0019 4.1E-08 57.0 13.1 95 144-250 150-244 (287)
147 TIGR00406 prmA ribosomal prote 97.5 0.00061 1.3E-08 60.3 9.4 97 142-247 157-260 (288)
148 PTZ00075 Adenosylhomocysteinas 97.5 0.00086 1.9E-08 62.5 9.9 93 142-249 251-344 (476)
149 COG4221 Short-chain alcohol de 97.3 0.0014 3E-08 55.2 8.7 79 144-224 5-91 (246)
150 PF01488 Shikimate_DH: Shikima 97.3 0.0011 2.4E-08 51.5 7.2 73 144-225 11-86 (135)
151 PRK00045 hemA glutamyl-tRNA re 97.2 0.0011 2.4E-08 61.9 7.7 161 16-227 91-255 (423)
152 PRK13943 protein-L-isoaspartat 97.2 0.0029 6.2E-08 56.6 9.8 103 136-245 72-179 (322)
153 PRK00377 cbiT cobalt-precorrin 97.2 0.0053 1.1E-07 51.1 10.6 102 138-245 34-144 (198)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.008 1.7E-07 51.2 12.0 102 144-248 4-137 (238)
155 PRK11705 cyclopropane fatty ac 97.2 0.0033 7.1E-08 57.9 10.0 110 128-247 151-268 (383)
156 COG2242 CobL Precorrin-6B meth 97.0 0.0091 2E-07 48.4 10.2 104 137-247 27-136 (187)
157 PRK05993 short chain dehydroge 97.0 0.0065 1.4E-07 53.3 9.7 78 144-223 3-85 (277)
158 COG3967 DltE Short-chain dehyd 96.9 0.0063 1.4E-07 49.9 8.3 78 145-224 5-88 (245)
159 PRK12742 oxidoreductase; Provi 96.9 0.024 5.2E-07 48.2 12.6 77 144-224 5-85 (237)
160 PRK06182 short chain dehydroge 96.9 0.0068 1.5E-07 53.0 9.4 79 144-224 2-84 (273)
161 PRK05693 short chain dehydroge 96.9 0.0066 1.4E-07 53.1 9.3 76 146-223 2-81 (274)
162 PF01135 PCMT: Protein-L-isoas 96.9 0.0017 3.6E-08 54.4 4.9 103 136-247 64-173 (209)
163 PF02353 CMAS: Mycolic acid cy 96.8 0.005 1.1E-07 53.9 7.8 102 136-247 54-167 (273)
164 COG1748 LYS9 Saccharopine dehy 96.8 0.017 3.6E-07 52.8 11.2 95 146-247 2-100 (389)
165 PF13460 NAD_binding_10: NADH( 96.8 0.015 3.3E-07 47.4 10.3 94 148-249 1-100 (183)
166 COG4122 Predicted O-methyltran 96.8 0.023 4.9E-07 47.7 10.8 104 138-245 53-165 (219)
167 COG2519 GCD14 tRNA(1-methylade 96.7 0.02 4.4E-07 48.6 10.2 104 136-247 86-196 (256)
168 PRK13942 protein-L-isoaspartat 96.7 0.0043 9.2E-08 52.3 6.1 103 136-246 68-176 (212)
169 TIGR02469 CbiT precorrin-6Y C5 96.7 0.011 2.4E-07 44.7 7.9 104 137-246 12-122 (124)
170 PRK13944 protein-L-isoaspartat 96.7 0.013 2.9E-07 49.0 9.0 104 136-245 64-172 (205)
171 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0065 1.4E-07 49.1 6.9 100 145-247 20-140 (168)
172 PF12847 Methyltransf_18: Meth 96.7 0.0078 1.7E-07 44.8 6.8 95 144-245 1-110 (112)
173 PRK04148 hypothetical protein; 96.6 0.063 1.4E-06 41.3 11.6 87 142-238 14-101 (134)
174 PRK08261 fabG 3-ketoacyl-(acyl 96.6 0.03 6.4E-07 52.9 12.1 78 144-223 209-293 (450)
175 TIGR00438 rrmJ cell division p 96.6 0.042 9.1E-07 45.2 11.6 100 139-246 27-146 (188)
176 KOG1205 Predicted dehydrogenas 96.6 0.035 7.5E-07 48.5 11.3 110 144-255 11-158 (282)
177 PRK07326 short chain dehydroge 96.6 0.042 9.1E-07 46.7 11.8 79 144-224 5-92 (237)
178 COG2230 Cfa Cyclopropane fatty 96.6 0.007 1.5E-07 52.6 6.8 110 132-251 60-181 (283)
179 PRK08017 oxidoreductase; Provi 96.6 0.017 3.7E-07 49.8 9.4 76 146-223 3-83 (256)
180 PRK06057 short chain dehydroge 96.5 0.021 4.6E-07 49.3 9.5 79 144-224 6-89 (255)
181 PRK14967 putative methyltransf 96.4 0.18 4E-06 42.7 14.7 98 138-245 30-158 (223)
182 PRK06139 short chain dehydroge 96.4 0.017 3.7E-07 52.2 8.7 78 144-223 6-93 (330)
183 PF00670 AdoHcyase_NAD: S-aden 96.4 0.042 9E-07 43.7 9.7 94 142-250 20-114 (162)
184 PF02826 2-Hacid_dh_C: D-isome 96.3 0.032 7E-07 45.5 9.1 88 143-245 34-126 (178)
185 PRK06949 short chain dehydroge 96.3 0.026 5.6E-07 48.7 9.0 79 143-223 7-95 (258)
186 PRK00536 speE spermidine synth 96.3 0.017 3.7E-07 50.0 7.6 99 143-247 71-172 (262)
187 PRK12828 short chain dehydroge 96.3 0.026 5.6E-07 47.9 8.9 79 144-224 6-92 (239)
188 PRK08177 short chain dehydroge 96.3 0.032 6.8E-07 47.2 9.2 77 146-224 2-81 (225)
189 COG2264 PrmA Ribosomal protein 96.3 0.044 9.6E-07 48.1 10.1 98 142-247 160-264 (300)
190 PRK07806 short chain dehydroge 96.3 0.083 1.8E-06 45.3 11.9 101 144-247 5-135 (248)
191 PRK05872 short chain dehydroge 96.3 0.022 4.9E-07 50.5 8.5 79 144-224 8-95 (296)
192 PLN03209 translocon at the inn 96.3 0.063 1.4E-06 51.6 11.8 46 138-184 73-119 (576)
193 PRK07814 short chain dehydroge 96.3 0.028 6.1E-07 48.8 8.9 78 144-223 9-96 (263)
194 TIGR03325 BphB_TodD cis-2,3-di 96.3 0.028 6.1E-07 48.8 8.9 78 144-223 4-88 (262)
195 PRK07060 short chain dehydroge 96.2 0.044 9.6E-07 46.8 9.9 77 144-224 8-87 (245)
196 PRK06200 2,3-dihydroxy-2,3-dih 96.2 0.034 7.4E-07 48.2 9.2 79 144-224 5-90 (263)
197 PRK06953 short chain dehydroge 96.2 0.041 8.8E-07 46.4 9.4 77 146-224 2-80 (222)
198 TIGR00080 pimt protein-L-isoas 96.2 0.013 2.8E-07 49.5 6.3 104 136-246 69-177 (215)
199 COG0300 DltE Short-chain dehyd 96.2 0.035 7.6E-07 48.0 8.9 80 143-224 4-94 (265)
200 KOG1209 1-Acyl dihydroxyaceton 96.2 0.022 4.7E-07 47.0 7.1 79 145-224 7-91 (289)
201 PRK07825 short chain dehydroge 96.2 0.04 8.7E-07 48.1 9.5 78 145-224 5-88 (273)
202 PLN02476 O-methyltransferase 96.2 0.038 8.3E-07 48.2 9.0 103 138-244 112-226 (278)
203 PRK03369 murD UDP-N-acetylmura 96.2 0.042 9.2E-07 52.4 10.2 74 141-225 8-81 (488)
204 PRK07109 short chain dehydroge 96.2 0.082 1.8E-06 47.8 11.6 79 144-224 7-95 (334)
205 PRK00811 spermidine synthase; 96.2 0.041 8.8E-07 48.5 9.4 99 143-246 75-191 (283)
206 PRK06841 short chain dehydroge 96.1 0.033 7.2E-07 48.0 8.8 79 144-224 14-99 (255)
207 PRK07402 precorrin-6B methylas 96.1 0.12 2.6E-06 42.8 11.6 106 136-247 32-143 (196)
208 PRK07831 short chain dehydroge 96.1 0.04 8.6E-07 47.8 9.2 81 142-224 14-107 (262)
209 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.042 9.2E-07 47.4 9.2 79 144-224 6-89 (255)
210 PRK12829 short chain dehydroge 96.1 0.035 7.6E-07 48.0 8.6 81 142-224 8-96 (264)
211 PRK13940 glutamyl-tRNA reducta 96.1 0.032 6.9E-07 51.8 8.6 76 143-227 179-255 (414)
212 PRK06180 short chain dehydroge 96.1 0.044 9.5E-07 48.0 9.2 78 145-224 4-88 (277)
213 PRK05867 short chain dehydroge 96.0 0.041 8.9E-07 47.4 8.8 79 144-224 8-96 (253)
214 PRK08339 short chain dehydroge 96.0 0.052 1.1E-06 47.2 9.4 79 144-224 7-95 (263)
215 PLN02780 ketoreductase/ oxidor 96.0 0.055 1.2E-06 48.7 9.8 80 144-224 52-142 (320)
216 PRK12939 short chain dehydroge 96.0 0.12 2.7E-06 44.1 11.6 79 144-224 6-94 (250)
217 PRK11207 tellurite resistance 96.0 0.041 8.8E-07 45.7 8.2 99 137-246 23-134 (197)
218 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.059 1.3E-06 46.2 9.5 79 144-224 4-90 (248)
219 COG2226 UbiE Methylase involve 96.0 0.084 1.8E-06 45.0 10.0 106 136-250 43-160 (238)
220 PLN02366 spermidine synthase 96.0 0.1 2.2E-06 46.5 11.0 102 143-246 90-206 (308)
221 PRK00107 gidB 16S rRNA methylt 96.0 0.036 7.9E-07 45.6 7.6 97 142-246 43-145 (187)
222 PF08704 GCD14: tRNA methyltra 96.0 0.02 4.4E-07 49.1 6.3 108 136-247 32-147 (247)
223 PRK08628 short chain dehydroge 95.9 0.047 1E-06 47.1 8.7 79 144-224 6-93 (258)
224 PLN02781 Probable caffeoyl-CoA 95.9 0.079 1.7E-06 45.3 9.7 103 138-244 62-176 (234)
225 TIGR02356 adenyl_thiF thiazole 95.9 0.093 2E-06 43.8 9.7 34 145-178 21-54 (202)
226 PRK07231 fabG 3-ketoacyl-(acyl 95.8 0.043 9.3E-07 47.0 8.0 79 144-224 4-91 (251)
227 PRK09291 short chain dehydroge 95.8 0.062 1.4E-06 46.3 8.9 73 145-223 2-82 (257)
228 PRK05866 short chain dehydroge 95.8 0.072 1.6E-06 47.2 9.4 79 144-224 39-127 (293)
229 cd01075 NAD_bind_Leu_Phe_Val_D 95.8 0.12 2.6E-06 43.0 10.1 81 143-236 26-107 (200)
230 PRK07062 short chain dehydroge 95.8 0.056 1.2E-06 46.9 8.5 79 144-224 7-97 (265)
231 PRK07774 short chain dehydroge 95.8 0.072 1.6E-06 45.7 9.1 79 144-224 5-93 (250)
232 PRK09072 short chain dehydroge 95.8 0.083 1.8E-06 45.8 9.5 79 144-224 4-90 (263)
233 TIGR01470 cysG_Nterm siroheme 95.7 0.35 7.7E-06 40.4 12.8 93 144-247 8-101 (205)
234 TIGR01809 Shik-DH-AROM shikima 95.7 0.053 1.2E-06 47.8 8.2 75 144-224 124-200 (282)
235 PRK06500 short chain dehydroge 95.7 0.076 1.6E-06 45.5 9.1 79 144-224 5-90 (249)
236 PRK06196 oxidoreductase; Provi 95.7 0.085 1.8E-06 47.2 9.7 79 144-224 25-109 (315)
237 PRK08265 short chain dehydroge 95.7 0.075 1.6E-06 46.1 9.0 79 144-224 5-90 (261)
238 TIGR01318 gltD_gamma_fam gluta 95.7 0.067 1.4E-06 50.8 9.3 78 144-226 140-238 (467)
239 PRK07478 short chain dehydroge 95.7 0.075 1.6E-06 45.8 9.0 79 144-224 5-93 (254)
240 PRK07024 short chain dehydroge 95.7 0.083 1.8E-06 45.7 9.3 78 145-224 2-88 (257)
241 PRK08217 fabG 3-ketoacyl-(acyl 95.7 0.077 1.7E-06 45.5 9.1 78 144-223 4-91 (253)
242 PRK07890 short chain dehydroge 95.7 0.076 1.7E-06 45.8 9.1 79 144-224 4-92 (258)
243 PF13241 NAD_binding_7: Putati 95.7 0.077 1.7E-06 39.0 7.7 87 144-247 6-92 (103)
244 PRK08589 short chain dehydroge 95.7 0.07 1.5E-06 46.6 8.8 79 144-224 5-92 (272)
245 PRK06079 enoyl-(acyl carrier p 95.7 0.08 1.7E-06 45.7 9.1 79 144-224 6-93 (252)
246 PRK07904 short chain dehydroge 95.7 0.1 2.2E-06 45.2 9.7 81 142-224 5-97 (253)
247 cd01080 NAD_bind_m-THF_DH_Cycl 95.7 0.12 2.7E-06 41.6 9.4 77 142-248 41-118 (168)
248 PRK07454 short chain dehydroge 95.7 0.11 2.3E-06 44.4 9.8 79 144-224 5-93 (241)
249 PLN02589 caffeoyl-CoA O-methyl 95.7 0.098 2.1E-06 45.0 9.3 102 139-244 74-188 (247)
250 PRK06483 dihydromonapterin red 95.6 0.11 2.3E-06 44.3 9.6 78 145-224 2-84 (236)
251 PRK06505 enoyl-(acyl carrier p 95.6 0.098 2.1E-06 45.8 9.5 79 144-224 6-95 (271)
252 PRK12549 shikimate 5-dehydroge 95.6 0.11 2.4E-06 45.8 9.7 43 143-185 125-167 (284)
253 PRK06198 short chain dehydroge 95.6 0.081 1.8E-06 45.7 8.8 80 144-224 5-94 (260)
254 PRK07523 gluconate 5-dehydroge 95.6 0.089 1.9E-06 45.4 9.0 79 144-224 9-97 (255)
255 COG0169 AroE Shikimate 5-dehyd 95.6 0.044 9.5E-07 48.1 6.9 44 144-187 125-168 (283)
256 PRK05653 fabG 3-ketoacyl-(acyl 95.6 0.11 2.5E-06 44.1 9.6 78 145-224 5-92 (246)
257 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.036 7.7E-07 52.4 6.9 44 138-182 27-75 (450)
258 PRK06482 short chain dehydroge 95.5 0.098 2.1E-06 45.7 9.2 77 146-224 3-86 (276)
259 PRK06128 oxidoreductase; Provi 95.5 0.23 5E-06 44.1 11.6 79 144-224 54-144 (300)
260 PRK05854 short chain dehydroge 95.5 0.11 2.3E-06 46.6 9.5 79 144-224 13-103 (313)
261 PRK07677 short chain dehydroge 95.5 0.081 1.8E-06 45.6 8.5 77 145-223 1-87 (252)
262 KOG0725 Reductases with broad 95.5 0.092 2E-06 45.9 8.8 79 144-224 7-99 (270)
263 PRK08226 short chain dehydroge 95.5 0.1 2.2E-06 45.2 9.1 79 144-224 5-92 (263)
264 PF01596 Methyltransf_3: O-met 95.5 0.037 8.1E-07 46.2 6.0 101 141-245 42-154 (205)
265 PRK06172 short chain dehydroge 95.5 0.097 2.1E-06 45.0 8.9 79 144-224 6-94 (253)
266 PRK04457 spermidine synthase; 95.5 0.21 4.5E-06 43.5 10.9 98 143-245 65-176 (262)
267 PRK12481 2-deoxy-D-gluconate 3 95.5 0.1 2.2E-06 45.0 9.0 79 144-224 7-93 (251)
268 PRK08213 gluconate 5-dehydroge 95.5 0.11 2.4E-06 44.9 9.2 79 144-224 11-99 (259)
269 PRK07063 short chain dehydroge 95.4 0.098 2.1E-06 45.2 8.9 79 144-224 6-96 (260)
270 PF03435 Saccharop_dh: Sacchar 95.4 0.12 2.5E-06 47.8 9.8 90 148-244 1-96 (386)
271 PRK06179 short chain dehydroge 95.4 0.038 8.2E-07 48.1 6.2 76 145-224 4-83 (270)
272 PRK06194 hypothetical protein; 95.4 0.097 2.1E-06 46.0 8.9 78 145-224 6-93 (287)
273 PRK12550 shikimate 5-dehydroge 95.4 0.12 2.6E-06 45.3 9.2 69 141-223 118-187 (272)
274 PRK12823 benD 1,6-dihydroxycyc 95.4 0.083 1.8E-06 45.7 8.3 78 144-223 7-93 (260)
275 PRK05717 oxidoreductase; Valid 95.4 0.12 2.5E-06 44.7 9.1 79 144-224 9-94 (255)
276 PRK07576 short chain dehydroge 95.4 0.13 2.8E-06 44.7 9.5 78 144-223 8-95 (264)
277 PRK15116 sulfur acceptor prote 95.4 0.41 8.9E-06 41.7 12.3 35 144-178 29-63 (268)
278 PRK05876 short chain dehydroge 95.4 0.1 2.3E-06 45.7 8.9 79 144-224 5-93 (275)
279 TIGR02632 RhaD_aldol-ADH rhamn 95.4 0.095 2.1E-06 52.2 9.5 114 98-224 378-503 (676)
280 PRK08643 acetoin reductase; Va 95.4 0.11 2.4E-06 44.8 8.9 78 145-224 2-89 (256)
281 PLN02253 xanthoxin dehydrogena 95.4 0.099 2.1E-06 45.8 8.7 79 144-224 17-104 (280)
282 PRK07035 short chain dehydroge 95.4 0.11 2.5E-06 44.5 8.9 78 144-223 7-94 (252)
283 PRK06138 short chain dehydroge 95.4 0.11 2.3E-06 44.7 8.7 79 144-224 4-91 (252)
284 PRK12809 putative oxidoreducta 95.3 0.093 2E-06 51.9 9.2 76 144-225 309-406 (639)
285 PRK08690 enoyl-(acyl carrier p 95.3 0.12 2.7E-06 44.8 9.1 79 144-224 5-94 (261)
286 PRK06603 enoyl-(acyl carrier p 95.3 0.11 2.3E-06 45.1 8.7 78 144-223 7-95 (260)
287 PRK08703 short chain dehydroge 95.3 0.091 2E-06 44.8 8.1 80 144-224 5-97 (239)
288 PRK07856 short chain dehydroge 95.3 0.089 1.9E-06 45.3 8.1 74 144-223 5-84 (252)
289 PRK07453 protochlorophyllide o 95.3 0.12 2.6E-06 46.4 9.2 78 144-223 5-92 (322)
290 PRK09186 flagellin modificatio 95.3 0.12 2.7E-06 44.4 8.9 78 144-223 3-92 (256)
291 PRK13394 3-hydroxybutyrate deh 95.3 0.12 2.5E-06 44.7 8.8 79 144-224 6-94 (262)
292 PRK06718 precorrin-2 dehydroge 95.3 0.53 1.1E-05 39.3 12.2 91 144-247 9-101 (202)
293 PRK08267 short chain dehydroge 95.3 0.14 3E-06 44.3 9.2 77 146-224 2-87 (260)
294 PRK07067 sorbitol dehydrogenas 95.2 0.14 3.1E-06 44.1 9.2 77 145-223 6-89 (257)
295 PRK08300 acetaldehyde dehydrog 95.2 0.29 6.4E-06 43.2 11.0 93 146-245 5-100 (302)
296 PRK06181 short chain dehydroge 95.2 0.14 2.9E-06 44.4 9.0 78 145-224 1-88 (263)
297 PRK06124 gluconate 5-dehydroge 95.2 0.16 3.5E-06 43.7 9.4 79 144-224 10-98 (256)
298 COG0421 SpeE Spermidine syntha 95.2 0.29 6.3E-06 42.9 10.8 97 146-245 78-189 (282)
299 PRK08993 2-deoxy-D-gluconate 3 95.2 0.15 3.3E-06 43.9 9.1 79 144-224 9-95 (253)
300 PRK06914 short chain dehydroge 95.2 0.14 3.1E-06 44.7 9.1 77 145-224 3-91 (280)
301 PRK08317 hypothetical protein; 95.2 0.27 5.8E-06 41.7 10.6 105 136-246 11-124 (241)
302 PRK06719 precorrin-2 dehydroge 95.2 0.21 4.5E-06 39.9 9.1 82 144-238 12-93 (157)
303 PF06325 PrmA: Ribosomal prote 95.2 0.015 3.3E-07 51.2 2.8 96 142-249 159-262 (295)
304 PRK06114 short chain dehydroge 95.2 0.16 3.4E-06 43.8 9.1 79 144-224 7-96 (254)
305 PRK08340 glucose-1-dehydrogena 95.2 0.15 3.2E-06 44.1 9.0 76 147-224 2-86 (259)
306 PRK06398 aldose dehydrogenase; 95.1 0.08 1.7E-06 45.8 7.3 74 144-224 5-82 (258)
307 PRK08251 short chain dehydroge 95.1 0.16 3.5E-06 43.5 9.1 77 145-223 2-90 (248)
308 PRK08277 D-mannonate oxidoredu 95.1 0.15 3.3E-06 44.6 9.0 78 144-223 9-96 (278)
309 PRK08862 short chain dehydroge 95.1 0.28 6E-06 41.7 10.4 78 144-223 4-92 (227)
310 PRK08085 gluconate 5-dehydroge 95.1 0.17 3.7E-06 43.5 9.3 79 144-224 8-96 (254)
311 COG2910 Putative NADH-flavin r 95.1 0.094 2E-06 42.4 6.8 92 147-248 2-106 (211)
312 PRK07502 cyclohexadienyl dehyd 95.1 0.18 3.9E-06 45.0 9.6 91 146-247 7-101 (307)
313 PRK05875 short chain dehydroge 95.1 0.16 3.5E-06 44.3 9.2 78 144-223 6-95 (276)
314 PRK06197 short chain dehydroge 95.1 0.16 3.4E-06 45.2 9.2 78 144-223 15-104 (306)
315 PRK14175 bifunctional 5,10-met 95.1 0.18 3.9E-06 44.3 9.1 93 125-248 138-232 (286)
316 PF00106 adh_short: short chai 95.1 0.12 2.6E-06 41.2 7.7 78 146-224 1-90 (167)
317 PLN02823 spermine synthase 95.1 0.25 5.5E-06 44.5 10.3 99 144-245 103-219 (336)
318 PRK07985 oxidoreductase; Provi 95.1 0.34 7.4E-06 42.9 11.2 79 144-224 48-138 (294)
319 PRK06935 2-deoxy-D-gluconate 3 95.1 0.15 3.3E-06 44.0 8.8 79 144-224 14-101 (258)
320 PRK00312 pcm protein-L-isoaspa 95.1 0.083 1.8E-06 44.4 6.9 102 136-247 70-176 (212)
321 COG0031 CysK Cysteine synthase 95.1 0.72 1.6E-05 40.6 12.7 60 138-197 55-116 (300)
322 TIGR03215 ac_ald_DH_ac acetald 95.1 0.37 8E-06 42.4 11.0 88 147-245 3-93 (285)
323 PRK07832 short chain dehydroge 95.0 0.16 3.4E-06 44.3 8.9 76 147-224 2-88 (272)
324 PRK07074 short chain dehydroge 95.0 0.19 4E-06 43.4 9.3 78 145-224 2-87 (257)
325 PRK09242 tropinone reductase; 95.0 0.17 3.6E-06 43.7 8.9 79 144-224 8-98 (257)
326 PRK08415 enoyl-(acyl carrier p 95.0 0.15 3.3E-06 44.7 8.7 79 144-224 4-93 (274)
327 TIGR03840 TMPT_Se_Te thiopurin 95.0 0.37 8.1E-06 40.5 10.6 102 142-247 32-153 (213)
328 PRK12936 3-ketoacyl-(acyl-carr 95.0 0.19 4.1E-06 42.8 9.1 79 144-224 5-90 (245)
329 PRK12769 putative oxidoreducta 95.0 0.12 2.7E-06 51.2 9.0 77 143-224 325-422 (654)
330 PRK10538 malonic semialdehyde 95.0 0.17 3.7E-06 43.4 8.8 76 147-224 2-84 (248)
331 KOG1201 Hydroxysteroid 17-beta 95.0 0.14 3.1E-06 44.6 8.1 79 143-223 36-123 (300)
332 PRK01581 speE spermidine synth 95.0 0.44 9.5E-06 43.3 11.4 102 142-246 148-268 (374)
333 PF02254 TrkA_N: TrkA-N domain 95.0 0.59 1.3E-05 34.8 10.8 74 148-226 1-74 (116)
334 PRK07577 short chain dehydroge 95.0 0.13 2.7E-06 43.7 7.9 73 145-224 3-78 (234)
335 PRK07533 enoyl-(acyl carrier p 95.0 0.19 4.2E-06 43.5 9.1 79 144-224 9-98 (258)
336 PRK12429 3-hydroxybutyrate deh 94.9 0.15 3.4E-06 43.8 8.5 78 144-223 3-90 (258)
337 cd05311 NAD_bind_2_malic_enz N 94.9 0.31 6.7E-06 41.4 10.1 91 143-246 23-128 (226)
338 COG1179 Dinucleotide-utilizing 94.9 0.41 8.8E-06 40.5 10.3 103 145-250 30-157 (263)
339 PRK06125 short chain dehydroge 94.9 0.17 3.6E-06 43.8 8.6 77 144-224 6-91 (259)
340 TIGR03206 benzo_BadH 2-hydroxy 94.9 0.2 4.2E-06 42.9 9.0 78 144-223 2-89 (250)
341 PRK12384 sorbitol-6-phosphate 94.9 0.17 3.7E-06 43.6 8.7 77 145-223 2-90 (259)
342 PRK08264 short chain dehydroge 94.9 0.13 2.9E-06 43.7 7.9 75 144-224 5-83 (238)
343 cd01078 NAD_bind_H4MPT_DH NADP 94.9 0.26 5.7E-06 40.7 9.3 41 144-185 27-68 (194)
344 PRK01683 trans-aconitate 2-met 94.9 0.37 8E-06 41.7 10.7 100 136-246 23-130 (258)
345 PRK07984 enoyl-(acyl carrier p 94.8 0.2 4.3E-06 43.6 8.9 78 144-223 5-93 (262)
346 CHL00194 ycf39 Ycf39; Provisio 94.8 0.2 4.3E-06 44.9 9.1 70 147-223 2-73 (317)
347 PRK07666 fabG 3-ketoacyl-(acyl 94.8 0.21 4.5E-06 42.5 8.9 78 145-224 7-94 (239)
348 PRK05884 short chain dehydroge 94.8 0.27 5.9E-06 41.5 9.5 74 147-223 2-78 (223)
349 PRK06484 short chain dehydroge 94.8 0.19 4.2E-06 48.3 9.5 79 144-224 4-89 (520)
350 PRK06720 hypothetical protein; 94.8 0.32 7E-06 39.3 9.3 38 144-182 15-53 (169)
351 cd00755 YgdL_like Family of ac 94.8 0.36 7.7E-06 41.1 10.0 35 145-179 11-45 (231)
352 PRK08618 ornithine cyclodeamin 94.8 0.33 7.2E-06 43.7 10.4 94 143-249 125-224 (325)
353 PRK08263 short chain dehydroge 94.7 0.23 4.9E-06 43.4 9.1 78 145-224 3-87 (275)
354 PRK12475 thiamine/molybdopteri 94.7 0.26 5.6E-06 44.6 9.6 35 145-179 24-58 (338)
355 PRK12937 short chain dehydroge 94.7 0.51 1.1E-05 40.2 11.2 79 144-224 4-93 (245)
356 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.28 6.1E-06 41.5 8.9 94 143-246 58-161 (243)
357 PLN03075 nicotianamine synthas 94.7 0.36 7.8E-06 42.6 10.1 96 144-246 123-233 (296)
358 COG0686 Ald Alanine dehydrogen 94.7 0.15 3.2E-06 44.8 7.4 98 142-247 166-269 (371)
359 PRK12938 acetyacetyl-CoA reduc 94.7 0.21 4.6E-06 42.7 8.7 79 144-224 2-91 (246)
360 PRK12367 short chain dehydroge 94.7 0.25 5.5E-06 42.5 9.1 72 145-224 14-89 (245)
361 PRK12826 3-ketoacyl-(acyl-carr 94.7 0.22 4.9E-06 42.5 8.9 79 144-224 5-93 (251)
362 PRK07097 gluconate 5-dehydroge 94.7 0.24 5.3E-06 42.9 9.2 79 144-224 9-97 (265)
363 PRK12548 shikimate 5-dehydroge 94.7 0.24 5.1E-06 43.9 9.1 36 144-179 125-160 (289)
364 TIGR01963 PHB_DH 3-hydroxybuty 94.7 0.22 4.8E-06 42.7 8.8 77 145-223 1-87 (255)
365 TIGR02355 moeB molybdopterin s 94.7 0.29 6.3E-06 42.0 9.3 35 145-179 24-58 (240)
366 cd01483 E1_enzyme_family Super 94.6 0.39 8.4E-06 37.5 9.3 32 147-178 1-32 (143)
367 PRK06484 short chain dehydroge 94.6 0.22 4.8E-06 47.9 9.5 80 143-224 267-353 (520)
368 TIGR00563 rsmB ribosomal RNA s 94.6 0.35 7.5E-06 45.4 10.5 105 138-247 232-369 (426)
369 cd01065 NAD_bind_Shikimate_DH 94.6 0.25 5.4E-06 39.0 8.3 74 143-225 17-92 (155)
370 PF03446 NAD_binding_2: NAD bi 94.6 0.41 8.9E-06 38.4 9.6 87 147-247 3-95 (163)
371 PRK06113 7-alpha-hydroxysteroi 94.6 0.25 5.4E-06 42.5 8.9 79 144-224 10-98 (255)
372 COG0373 HemA Glutamyl-tRNA red 94.6 0.2 4.4E-06 46.1 8.5 73 144-226 177-250 (414)
373 PRK14103 trans-aconitate 2-met 94.6 0.71 1.5E-05 39.9 11.7 97 136-245 21-125 (255)
374 PF01113 DapB_N: Dihydrodipico 94.6 0.13 2.8E-06 39.2 6.2 95 147-250 2-101 (124)
375 TIGR00417 speE spermidine synt 94.5 0.47 1E-05 41.5 10.5 101 143-246 71-186 (270)
376 PRK12743 oxidoreductase; Provi 94.5 0.26 5.6E-06 42.5 8.8 78 145-224 2-90 (256)
377 PRK08159 enoyl-(acyl carrier p 94.5 0.35 7.5E-06 42.3 9.7 79 144-224 9-98 (272)
378 TIGR00477 tehB tellurite resis 94.5 0.22 4.7E-06 41.3 7.9 99 137-246 23-133 (195)
379 PRK05690 molybdopterin biosynt 94.5 0.37 8E-06 41.5 9.5 34 145-178 32-65 (245)
380 COG3288 PntA NAD/NADP transhyd 94.4 0.52 1.1E-05 41.3 10.1 128 142-271 161-308 (356)
381 PRK07688 thiamine/molybdopteri 94.4 0.31 6.6E-06 44.2 9.2 34 145-178 24-57 (339)
382 cd00757 ThiF_MoeB_HesA_family 94.4 0.4 8.7E-06 40.8 9.5 34 145-178 21-54 (228)
383 PRK08287 cobalt-precorrin-6Y C 94.4 0.21 4.5E-06 41.1 7.5 100 137-245 24-130 (187)
384 PRK07574 formate dehydrogenase 94.4 0.49 1.1E-05 43.6 10.5 45 144-189 191-235 (385)
385 PRK08303 short chain dehydroge 94.3 0.34 7.4E-06 43.2 9.4 78 144-223 7-105 (305)
386 PF00899 ThiF: ThiF family; I 94.3 0.16 3.5E-06 39.3 6.4 35 145-179 2-36 (135)
387 PRK08594 enoyl-(acyl carrier p 94.3 0.26 5.6E-06 42.7 8.4 78 144-223 6-96 (257)
388 PRK08063 enoyl-(acyl carrier p 94.3 0.29 6.2E-06 41.9 8.6 79 144-224 3-92 (250)
389 PRK06523 short chain dehydroge 94.3 0.21 4.6E-06 43.1 7.8 75 144-223 8-86 (260)
390 PRK07791 short chain dehydroge 94.3 0.4 8.6E-06 42.3 9.6 80 143-224 4-102 (286)
391 TIGR00138 gidB 16S rRNA methyl 94.3 0.13 2.8E-06 42.1 6.0 92 145-245 43-141 (181)
392 cd05211 NAD_bind_Glu_Leu_Phe_V 94.3 0.33 7.2E-06 40.9 8.6 46 144-189 22-77 (217)
393 PRK08644 thiamine biosynthesis 94.2 0.42 9.1E-06 40.2 9.2 34 145-178 28-61 (212)
394 PRK10669 putative cation:proto 94.2 0.62 1.3E-05 45.4 11.6 74 146-224 418-491 (558)
395 TIGR02752 MenG_heptapren 2-hep 94.2 0.28 6E-06 41.7 8.2 105 136-247 37-152 (231)
396 TIGR00507 aroE shikimate 5-deh 94.2 0.37 8E-06 42.2 9.1 92 143-247 115-215 (270)
397 PRK08416 7-alpha-hydroxysteroi 94.1 0.35 7.5E-06 41.9 8.9 78 144-223 7-96 (260)
398 PRK08328 hypothetical protein; 94.1 0.43 9.3E-06 40.7 9.1 34 145-178 27-60 (231)
399 KOG1207 Diacetyl reductase/L-x 94.1 0.22 4.8E-06 39.9 6.6 44 144-188 6-50 (245)
400 PRK06171 sorbitol-6-phosphate 94.1 0.2 4.2E-06 43.5 7.2 76 144-224 8-87 (266)
401 TIGR02622 CDP_4_6_dhtase CDP-g 94.1 0.15 3.2E-06 46.4 6.6 74 144-223 3-84 (349)
402 PRK03562 glutathione-regulated 94.0 0.42 9.1E-06 47.1 10.1 78 145-227 400-477 (621)
403 PRK01438 murD UDP-N-acetylmura 94.0 0.45 9.8E-06 45.3 10.1 69 144-224 15-88 (480)
404 PRK14192 bifunctional 5,10-met 94.0 0.32 6.9E-06 42.8 8.2 76 143-248 157-233 (283)
405 KOG3010 Methyltransferase [Gen 94.0 0.11 2.5E-06 43.7 5.1 103 137-245 25-135 (261)
406 PRK08945 putative oxoacyl-(acy 94.0 0.25 5.3E-06 42.3 7.5 83 141-224 8-102 (247)
407 COG0569 TrkA K+ transport syst 93.9 0.57 1.2E-05 39.8 9.5 73 147-224 2-76 (225)
408 KOG1610 Corticosteroid 11-beta 93.9 1.1 2.4E-05 39.5 11.2 112 141-253 25-171 (322)
409 PTZ00098 phosphoethanolamine N 93.9 0.26 5.7E-06 42.9 7.6 105 136-247 44-157 (263)
410 PRK08762 molybdopterin biosynt 93.9 0.39 8.4E-06 44.2 9.0 35 144-178 134-168 (376)
411 PRK05447 1-deoxy-D-xylulose 5- 93.9 0.59 1.3E-05 42.7 9.9 97 146-244 2-120 (385)
412 PF02670 DXP_reductoisom: 1-de 93.9 0.49 1.1E-05 36.2 8.0 88 148-238 1-114 (129)
413 KOG1252 Cystathionine beta-syn 93.8 0.45 9.7E-06 42.2 8.7 57 138-195 96-156 (362)
414 PRK06077 fabG 3-ketoacyl-(acyl 93.8 1.4 3E-05 37.6 12.0 77 145-223 6-93 (252)
415 PRK05562 precorrin-2 dehydroge 93.8 3.1 6.7E-05 35.2 13.5 92 144-247 24-117 (223)
416 PRK06940 short chain dehydroge 93.8 0.49 1.1E-05 41.4 9.3 77 145-224 2-86 (275)
417 PRK06101 short chain dehydroge 93.8 0.34 7.3E-06 41.3 8.1 75 146-223 2-80 (240)
418 PF02558 ApbA: Ketopantoate re 93.8 0.043 9.2E-07 43.3 2.3 94 148-247 1-102 (151)
419 PLN02244 tocopherol O-methyltr 93.8 0.54 1.2E-05 42.7 9.6 98 143-247 117-224 (340)
420 cd01492 Aos1_SUMO Ubiquitin ac 93.7 0.64 1.4E-05 38.6 9.2 34 145-178 21-54 (197)
421 PLN03139 formate dehydrogenase 93.7 0.7 1.5E-05 42.5 10.2 45 144-189 198-242 (386)
422 PRK06997 enoyl-(acyl carrier p 93.7 0.51 1.1E-05 40.9 9.0 79 144-224 5-94 (260)
423 PRK07370 enoyl-(acyl carrier p 93.6 0.44 9.5E-06 41.2 8.6 79 144-224 5-97 (258)
424 PRK07775 short chain dehydroge 93.6 0.55 1.2E-05 41.0 9.2 79 144-224 9-97 (274)
425 PRK05650 short chain dehydroge 93.6 0.45 9.8E-06 41.4 8.7 76 147-224 2-87 (270)
426 PRK05565 fabG 3-ketoacyl-(acyl 93.6 0.49 1.1E-05 40.3 8.8 78 145-224 5-93 (247)
427 TIGR01532 E4PD_g-proteo D-eryt 93.6 0.71 1.5E-05 41.5 9.9 100 147-248 1-122 (325)
428 PRK07424 bifunctional sterol d 93.6 0.47 1E-05 44.1 9.0 74 144-224 177-255 (406)
429 PRK00121 trmB tRNA (guanine-N( 93.6 1.3 2.7E-05 36.9 10.9 98 144-246 40-156 (202)
430 PRK08278 short chain dehydroge 93.6 0.46 1E-05 41.5 8.7 79 144-224 5-100 (273)
431 PRK03659 glutathione-regulated 93.6 0.59 1.3E-05 45.9 10.2 77 146-227 401-477 (601)
432 PRK09135 pteridine reductase; 93.6 0.57 1.2E-05 39.9 9.1 78 144-223 5-94 (249)
433 PRK08223 hypothetical protein; 93.5 0.41 9E-06 42.0 8.0 35 145-179 27-61 (287)
434 TIGR02415 23BDH acetoin reduct 93.5 0.5 1.1E-05 40.5 8.7 77 146-224 1-87 (254)
435 PLN03013 cysteine synthase 93.5 1.7 3.6E-05 40.6 12.3 57 138-194 167-226 (429)
436 KOG1200 Mitochondrial/plastidi 93.5 0.63 1.4E-05 38.1 8.3 78 145-224 14-100 (256)
437 TIGR02354 thiF_fam2 thiamine b 93.5 0.25 5.5E-06 41.1 6.4 34 145-178 21-54 (200)
438 PRK14188 bifunctional 5,10-met 93.5 0.63 1.4E-05 41.1 9.1 92 125-248 138-232 (296)
439 PRK04266 fibrillarin; Provisio 93.4 0.67 1.5E-05 39.4 9.1 102 138-245 66-175 (226)
440 PRK13255 thiopurine S-methyltr 93.4 1.2 2.6E-05 37.6 10.6 101 141-245 34-154 (218)
441 PRK11036 putative S-adenosyl-L 93.4 1.1 2.5E-05 38.7 10.7 97 143-246 43-149 (255)
442 PRK07102 short chain dehydroge 93.4 0.78 1.7E-05 39.1 9.7 38 146-184 2-40 (243)
443 cd01487 E1_ThiF_like E1_ThiF_l 93.4 0.58 1.3E-05 38.0 8.3 33 147-179 1-33 (174)
444 PRK12825 fabG 3-ketoacyl-(acyl 93.4 0.59 1.3E-05 39.7 8.9 77 145-223 6-93 (249)
445 PRK07889 enoyl-(acyl carrier p 93.3 0.71 1.5E-05 39.9 9.3 79 144-224 6-95 (256)
446 PRK09134 short chain dehydroge 93.3 0.63 1.4E-05 40.1 9.0 79 144-224 8-97 (258)
447 PRK00258 aroE shikimate 5-dehy 93.3 0.28 6.1E-06 43.1 6.8 95 143-246 121-221 (278)
448 PF02719 Polysacc_synt_2: Poly 93.3 0.52 1.1E-05 41.5 8.2 74 148-223 1-86 (293)
449 PLN00203 glutamyl-tRNA reducta 93.3 0.41 8.9E-06 45.9 8.3 75 145-226 266-341 (519)
450 PRK08642 fabG 3-ketoacyl-(acyl 93.2 0.62 1.4E-05 39.8 8.9 77 145-223 5-90 (253)
451 PLN02233 ubiquinone biosynthes 93.2 0.53 1.2E-05 41.0 8.4 102 138-248 67-184 (261)
452 PLN00141 Tic62-NAD(P)-related 93.2 0.57 1.2E-05 40.3 8.6 76 144-224 16-95 (251)
453 PRK07417 arogenate dehydrogena 93.2 0.89 1.9E-05 39.9 9.9 66 147-224 2-67 (279)
454 PRK07792 fabG 3-ketoacyl-(acyl 93.2 0.68 1.5E-05 41.3 9.2 79 144-224 11-99 (306)
455 PRK06947 glucose-1-dehydrogena 93.2 0.54 1.2E-05 40.2 8.4 76 146-223 3-89 (248)
456 PF03807 F420_oxidored: NADP o 93.2 2.2 4.8E-05 30.4 11.3 85 147-245 1-93 (96)
457 PLN02986 cinnamyl-alcohol dehy 93.2 0.66 1.4E-05 41.5 9.2 37 144-181 4-41 (322)
458 PRK05557 fabG 3-ketoacyl-(acyl 93.1 0.7 1.5E-05 39.2 9.0 79 144-224 4-93 (248)
459 PLN02657 3,8-divinyl protochlo 93.1 0.88 1.9E-05 42.1 10.1 80 142-224 57-146 (390)
460 PRK10258 biotin biosynthesis p 93.1 1.1 2.4E-05 38.6 10.2 99 138-247 36-141 (251)
461 smart00846 Gp_dh_N Glyceraldeh 93.1 0.68 1.5E-05 36.5 8.0 101 147-249 2-121 (149)
462 PRK14903 16S rRNA methyltransf 93.1 1.3 2.8E-05 41.7 11.2 104 139-248 232-368 (431)
463 PF01408 GFO_IDH_MocA: Oxidore 93.1 1.7 3.6E-05 32.5 10.0 88 147-247 2-93 (120)
464 PRK03612 spermidine synthase; 93.1 0.76 1.7E-05 44.3 9.9 101 143-246 296-415 (521)
465 KOG1014 17 beta-hydroxysteroid 93.1 0.88 1.9E-05 40.0 9.2 79 143-224 47-136 (312)
466 PRK14027 quinate/shikimate deh 93.1 0.43 9.3E-06 42.0 7.5 43 143-185 125-167 (283)
467 PRK15469 ghrA bifunctional gly 93.1 0.8 1.7E-05 41.0 9.4 36 144-180 135-170 (312)
468 TIGR01289 LPOR light-dependent 93.1 0.68 1.5E-05 41.4 9.0 78 145-224 3-91 (314)
469 PRK05855 short chain dehydroge 93.0 0.53 1.2E-05 45.7 9.0 79 144-224 314-402 (582)
470 PRK05597 molybdopterin biosynt 93.0 0.62 1.3E-05 42.5 8.7 35 145-179 28-62 (355)
471 PF01564 Spermine_synth: Sperm 93.0 0.39 8.4E-06 41.4 7.0 101 144-246 76-191 (246)
472 PRK06849 hypothetical protein; 93.0 1.1 2.4E-05 41.4 10.5 79 144-223 3-85 (389)
473 PRK08219 short chain dehydroge 93.0 0.53 1.2E-05 39.5 7.9 72 146-224 4-81 (227)
474 PRK08220 2,3-dihydroxybenzoate 92.9 0.52 1.1E-05 40.3 7.9 74 144-224 7-86 (252)
475 PRK06701 short chain dehydroge 92.9 0.78 1.7E-05 40.5 9.1 80 143-224 44-134 (290)
476 TIGR01505 tartro_sem_red 2-hyd 92.9 1.6 3.4E-05 38.6 11.1 70 147-229 1-70 (291)
477 PRK08936 glucose-1-dehydrogena 92.9 0.73 1.6E-05 39.8 8.8 79 144-224 6-95 (261)
478 PLN02490 MPBQ/MSBQ methyltrans 92.9 1.1 2.5E-05 40.4 10.1 97 143-247 112-216 (340)
479 PRK13243 glyoxylate reductase; 92.9 1.4 3.1E-05 39.8 10.8 36 144-180 149-184 (333)
480 PRK14618 NAD(P)H-dependent gly 92.8 1.5 3.2E-05 39.6 10.9 96 147-247 6-105 (328)
481 PRK12744 short chain dehydroge 92.8 0.64 1.4E-05 40.0 8.3 79 144-224 7-99 (257)
482 PRK14982 acyl-ACP reductase; P 92.8 0.65 1.4E-05 41.9 8.3 93 143-248 153-248 (340)
483 PRK09730 putative NAD(P)-bindi 92.7 0.77 1.7E-05 39.1 8.6 77 146-224 2-89 (247)
484 PF13659 Methyltransf_26: Meth 92.7 0.46 1E-05 35.3 6.4 97 145-246 1-115 (117)
485 COG1648 CysG Siroheme synthase 92.7 4.4 9.6E-05 34.0 12.6 92 144-247 11-104 (210)
486 PLN02256 arogenate dehydrogena 92.7 1.3 2.8E-05 39.5 10.0 93 140-247 31-128 (304)
487 PRK12824 acetoacetyl-CoA reduc 92.6 0.85 1.8E-05 38.7 8.8 77 146-224 3-90 (245)
488 PRK05600 thiamine biosynthesis 92.6 0.87 1.9E-05 41.8 9.2 34 145-178 41-74 (370)
489 TIGR01829 AcAcCoA_reduct aceto 92.6 0.63 1.4E-05 39.5 7.9 77 146-224 1-88 (242)
490 PF01209 Ubie_methyltran: ubiE 92.6 0.5 1.1E-05 40.4 7.1 106 137-251 40-158 (233)
491 PLN02928 oxidoreductase family 92.6 1.3 2.9E-05 40.2 10.2 34 144-178 158-191 (347)
492 PRK12935 acetoacetyl-CoA reduc 92.6 0.81 1.8E-05 39.0 8.6 79 144-224 5-94 (247)
493 PRK00216 ubiE ubiquinone/menaq 92.5 0.91 2E-05 38.5 8.7 104 138-247 45-159 (239)
494 PRK07340 ornithine cyclodeamin 92.4 0.58 1.3E-05 41.7 7.6 96 143-249 123-220 (304)
495 PRK13656 trans-2-enoyl-CoA red 92.4 1 2.2E-05 41.3 9.1 80 143-225 39-142 (398)
496 PRK10901 16S rRNA methyltransf 92.4 1.7 3.6E-05 40.8 11.0 102 139-247 239-373 (427)
497 PF08241 Methyltransf_11: Meth 92.4 0.17 3.7E-06 35.8 3.5 84 151-244 3-95 (95)
498 COG1086 Predicted nucleoside-d 92.4 0.46 9.9E-06 45.2 7.0 75 144-223 249-334 (588)
499 PRK14902 16S rRNA methyltransf 92.4 1.3 2.8E-05 41.8 10.3 104 138-247 244-380 (444)
500 PRK12749 quinate/shikimate deh 92.4 0.52 1.1E-05 41.6 7.1 36 144-179 123-158 (288)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=6e-55 Score=372.25 Aligned_cols=320 Identities=49% Similarity=0.922 Sum_probs=297.6
Q ss_pred cCCCCCC-CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713 5 KRWGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF 83 (329)
Q Consensus 5 ~~~~~~~-~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 83 (329)
.+.|..| .||.++|||.+|+|++||++|+.+++||+|+..++-+||.|.+|.+|+++.|......-+.| .+-+|.+||
T Consensus 46 ~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG-~m~dGttrl 124 (366)
T COG1062 46 TLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG-TMPDGTTRL 124 (366)
T ss_pred hhcCCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccc-cccCCceee
Confidence 3444343 69999999999999999999999999999999999999999999999999999877777777 788999999
Q ss_pred ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713 84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG 163 (329)
Q Consensus 84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l 163 (329)
+.++.+.+++.+.++|+||.++++..+++++++.+++.++.+.|+..|++.+.++.+++++|++|.|+|.|++|++++|-
T Consensus 125 s~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~g 204 (366)
T COG1062 125 SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQG 204 (366)
T ss_pred ecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV 243 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv 243 (329)
|+..|++++++++.+++|++++++||+++++|..+.. +..+.+++++++++|.+||++|..+.++++++++.+ ||+.+
T Consensus 205 A~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v 282 (366)
T COG1062 205 AKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSV 282 (366)
T ss_pred HHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEE
Confidence 9999999999999999999999999999999988763 488999999999999999999999999999999999 59999
Q ss_pred EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713 244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC 323 (329)
Q Consensus 244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv 323 (329)
.+|........+.++..+....++.|+.++....+.++.++++++.+|++.+++++++.++|+||++||+.|++++..|-
T Consensus 283 ~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~ 362 (366)
T COG1062 283 IIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRS 362 (366)
T ss_pred EEecCCCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeE
Confidence 99987776666666666666699999999988888999999999999999999999999999999999999999999988
Q ss_pred EEee
Q 047713 324 IIRM 327 (329)
Q Consensus 324 vv~~ 327 (329)
||.+
T Consensus 363 Vi~~ 366 (366)
T COG1062 363 VIRF 366 (366)
T ss_pred EecC
Confidence 8864
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-54 Score=361.93 Aligned_cols=324 Identities=56% Similarity=1.018 Sum_probs=304.4
Q ss_pred CcCCCCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713 4 DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF 83 (329)
Q Consensus 4 ~~~~~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 83 (329)
|........||+|+|||.+|+|+.+|.+|+.|++||+|+..+...|+.|.+|+++..|.|..-+.....+.+++|+.+||
T Consensus 52 ~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF 131 (375)
T KOG0022|consen 52 WSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRF 131 (375)
T ss_pred ecCCCccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceee
Confidence 33333344789999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713 84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG 163 (329)
Q Consensus 84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l 163 (329)
.-+|+++|++-+..+|+||.+++...+++|++..+++.++.+.|..+|+|.|..+.+++++|+++.|+|.|.+|+++++-
T Consensus 132 ~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~G 211 (375)
T KOG0022|consen 132 TCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMG 211 (375)
T ss_pred eeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV 243 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv 243 (329)
|+..|++++++++.+++|++.+++||+++.+|+.+......+.+.+.+++|+|+-|||+|..+.+.+++.+...+||.-+
T Consensus 212 aka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv 291 (375)
T KOG0022|consen 212 AKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSV 291 (375)
T ss_pred HHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEE
Confidence 99999999999999999999999999999999986554588889999999999999999999999999999999999999
Q ss_pred EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713 244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC 323 (329)
Q Consensus 244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv 323 (329)
.+|...........+..+....++.|+.++.+..+.+++.+++.+.++++.++.++++.+||++|++||+.|.+++..|-
T Consensus 292 ~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~ 371 (375)
T KOG0022|consen 292 VIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRC 371 (375)
T ss_pred EEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEE
Confidence 99987777777777877888999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEee
Q 047713 324 IIRM 327 (329)
Q Consensus 324 vv~~ 327 (329)
||.+
T Consensus 372 vl~~ 375 (375)
T KOG0022|consen 372 VLWM 375 (375)
T ss_pred EEeC
Confidence 8764
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.6e-53 Score=369.27 Aligned_cols=282 Identities=30% Similarity=0.495 Sum_probs=247.6
Q ss_pred CCCCCcccCCcceEEEEEecCCCCcCCCCCEEee-cCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713 10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP-VFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK 88 (329)
Q Consensus 10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 88 (329)
.+.+|+|||||.+|+|+++|++|++|++||||.+ .+..+|++|++|++|+++.|++....
T Consensus 54 ~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~------------------- 114 (339)
T COG1064 54 VPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT------------------- 114 (339)
T ss_pred CCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCcccc-------------------
Confidence 3458999999999999999999999999999998 77889999999999999999986552
Q ss_pred ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
+++.+|+|+||+++|+.++++||+++++++||++.|++.|.|++| ...+++||++|+|+|.|++|++++|+|+++|
T Consensus 115 ---gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g 190 (339)
T COG1064 115 ---GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMG 190 (339)
T ss_pred ---ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcC
Confidence 344578999999999999999999999999999999999999996 4599999999999999999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+ +|++++++++|.+.+++||++++++..+.+ ..+.+++. +|++||+++ +..++.+++.|+++ |+++++|..
T Consensus 191 a-~Via~~~~~~K~e~a~~lGAd~~i~~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~ 261 (339)
T COG1064 191 A-EVIAITRSEEKLELAKKLGADHVINSSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLP 261 (339)
T ss_pred C-eEEEEeCChHHHHHHHHhCCcEEEEcCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCC
Confidence 7 999999999999999999999999876443 66666554 999999998 89999999999998 999999987
Q ss_pred CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713 249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR 326 (329)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~ 326 (329)
......... ..++.+++++.|+..++. .++++++++..++++.+. +.+.++++|+++|+++|++++. +|.||+
T Consensus 262 ~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~ 336 (339)
T COG1064 262 GGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVID 336 (339)
T ss_pred CCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEec
Confidence 422222222 335679999999998886 789999999999987543 4379999999999999999986 599887
Q ss_pred eC
Q 047713 327 MD 328 (329)
Q Consensus 327 ~~ 328 (329)
+.
T Consensus 337 ~~ 338 (339)
T COG1064 337 MS 338 (339)
T ss_pred CC
Confidence 64
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-49 Score=336.73 Aligned_cols=290 Identities=28% Similarity=0.444 Sum_probs=251.4
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
+.|+++|||.+|+|+++|+.|+++++||||++.|..+|+.|+.|++||+|.|+++...--
T Consensus 60 k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~at-------------------- 119 (354)
T KOG0024|consen 60 KKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCAT-------------------- 119 (354)
T ss_pred ccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccC--------------------
Confidence 469999999999999999999999999999999999999999999999999998765310
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
-..+|++++|++.+++.++|+||++|++++| +..+++++++| ..++++++|.+|||+|+|+||+++...|+.+|+.+
T Consensus 120 -pp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~ 196 (354)
T KOG0024|consen 120 -PPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASD 196 (354)
T ss_pred -CCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCc
Confidence 1225799999999999999999999999966 56679999998 68899999999999999999999999999999999
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCC--chHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYD--KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
|+.++..+.|++++++||++.+.+..... ..+.+.++...+. .+|++|||+|....++.++..++.+ |++++.+..
T Consensus 197 VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g 275 (354)
T KOG0024|consen 197 VVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG 275 (354)
T ss_pred EEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC
Confidence 99999999999999999999887665543 2344555555554 6999999999999999999999998 999999886
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc--ceEEEEe
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE--SIRCIIR 326 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~--~~kvvv~ 326 (329)
....+++.. ....+++.+.|++-... .++..+++++++|++.+++++++.|+++++.+||+.+..+. ..|+++.
T Consensus 276 ~~~~~fpi~-~v~~kE~~~~g~fry~~---~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 276 AEEIQFPII-DVALKEVDLRGSFRYCN---GDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred CCccccChh-hhhhheeeeeeeeeecc---ccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 665544432 23578999999874332 58999999999999999999999999999999999988776 4599998
Q ss_pred eCC
Q 047713 327 MDG 329 (329)
Q Consensus 327 ~~~ 329 (329)
.++
T Consensus 352 ~~~ 354 (354)
T KOG0024|consen 352 GPE 354 (354)
T ss_pred CCC
Confidence 764
No 5
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.1e-46 Score=341.69 Aligned_cols=316 Identities=52% Similarity=0.991 Sum_probs=253.1
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|.+.......|+.. ++.-++.++|.+.
T Consensus 53 ~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~-~~~~~~~~~g~~~ 131 (368)
T TIGR02818 53 GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP-DGTSRFSKDGQPI 131 (368)
T ss_pred CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCccccccccccc-CCccccccCCCcc
Confidence 357899999999999999999999999999999989999999999999999998744322222211 1111222333333
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
++....|+|+||+.+|++.++++|+++++++++++++++.|||+++....++++|++|||+|+|++|++++|+|+.+|++
T Consensus 132 ~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~ 211 (368)
T TIGR02818 132 YHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKAS 211 (368)
T ss_pred cccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 33333579999999999999999999999999999999999999987888999999999999999999999999999987
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++.+++++++++++|++.++++.+.+.++.+.+++++++++|+|||++|.+..+..+++++++++|+++.+|....
T Consensus 212 ~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~ 291 (368)
T TIGR02818 212 RIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA 291 (368)
T ss_pred eEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC
Confidence 79999999999999999999999887653334667777777668999999999888899999999773399999987532
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~ 327 (329)
.......+..+.++..+.++..+......++.++++++.++++.++++++++|+|+|+++|++.+.+++..|++|.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 292 GQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred CCcccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 22222222222234456666554333335688999999999988888899999999999999999888778999864
No 6
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.8e-46 Score=342.51 Aligned_cols=315 Identities=82% Similarity=1.342 Sum_probs=264.4
Q ss_pred CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
.+.+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|.+|+.|+++.|.+.......|+...++.+++...|..
T Consensus 53 ~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~ 132 (369)
T cd08301 53 TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKP 132 (369)
T ss_pred CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcc
Confidence 34679999999999999999999999999999999999999999999999999997544333444444444455555555
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
.++....|+|+||++++++.++++|+++++++++++++++.|+|.++....++++|++|||+|+|++|++++|+|+.+|+
T Consensus 133 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~ 212 (369)
T cd08301 133 IYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGA 212 (369)
T ss_pred eeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 55554568999999999999999999999999999999999999987788899999999999999999999999999998
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhcc-CCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD-GWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~-~~G~vv~~g~~ 248 (329)
++|+++++++++.++++++|++.+++..+.+..+.+.+++++++++|+|||++|....+..+++++++ + |+++.+|..
T Consensus 213 ~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~ 291 (369)
T cd08301 213 SRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVP 291 (369)
T ss_pred CeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcC
Confidence 67999999999999999999998888765322366777877766899999999987788999999998 5 899999976
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 325 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv 325 (329)
......++.+..+.+++++.|+..+.+..+.+++++++++.++.+++.++++++|+|+|+++|++.+.+++..|++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 292 HKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred CCCcccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 54323333333345788999987766655557889999999999888878899999999999999999998888886
No 7
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.1e-46 Score=340.47 Aligned_cols=316 Identities=57% Similarity=1.055 Sum_probs=257.2
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|+++.|.+.... ..|++..+...++++.|.+.+
T Consensus 62 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 140 (378)
T PLN02827 62 LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVY 140 (378)
T ss_pred CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccc
Confidence 4689999999999999999999999999999999999999999999999999864221 112221122222223333322
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|+||+.+|++.++++|+++++++++++++++.++|+++....++++|++|||+|+|++|++++|+|+.+|++.
T Consensus 141 ~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~ 220 (378)
T PLN02827 141 HYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQ 220 (378)
T ss_pred cccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 23345899999999999999999999999999999888999987777788999999999999999999999999999867
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
|++++.++++.++++++|++.++++.+.+.++.+.+++++++++|+|||++|....+..+++.+++++|+++.+|.....
T Consensus 221 vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~ 300 (378)
T PLN02827 221 IIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK 300 (378)
T ss_pred EEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC
Confidence 88888899999999999999998876532247777888776689999999998778899999998833899999875443
Q ss_pred CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 328 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~ 328 (329)
..+.....++.+++++.|+....+....++.++++++.++++.+++++++.|+|+++++|++.+.+++..|+||.+.
T Consensus 301 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 22222223466899999988765544457889999999999988778999999999999999999888789999875
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1e-45 Score=338.86 Aligned_cols=310 Identities=39% Similarity=0.714 Sum_probs=253.9
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|+++.|.+.......|..+ .+..++..++....
T Consensus 60 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~ 138 (371)
T cd08281 60 PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLL-SGGRRLRLRGGEIN 138 (371)
T ss_pred CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccc-cCcccccccCcccc
Confidence 57899999999999999999999999999999888899999999999999998754322222211 11011111110001
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+..+.|+|+||+.+|++.++++|+++++++++.+++++.|||.++....++++|++|||+|+|++|++++|+|+..|+++
T Consensus 139 ~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~ 218 (371)
T cd08281 139 HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQ 218 (371)
T ss_pred cccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 11123799999999999999999999999999999999999998878889999999999999999999999999999967
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
|++++.+++++++++++|++.++++.+.+ +.+.+++++++++|+|||++|.+..+..++++++++ |+++.+|.....
T Consensus 219 Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~ 295 (371)
T cd08281 219 VVAVDLNEDKLALARELGATATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPE 295 (371)
T ss_pred EEEEcCCHHHHHHHHHcCCceEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCC
Confidence 99999999999999999999999876654 778888887668999999999888999999999998 999999875432
Q ss_pred Ccccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713 252 DAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 325 (329)
Q Consensus 252 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv 325 (329)
....+.. .++.+++++.|++.+.+..++++.++++++.++++.++++++++|+|+|+++|++.+.+++..|+||
T Consensus 296 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 296 ARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 2222222 3456899999988765544467889999999999988888999999999999999999988776654
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.2e-45 Score=337.99 Aligned_cols=314 Identities=58% Similarity=1.049 Sum_probs=254.4
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.|++||||++.+..+|+.|++|++|+++.|.+.......|+.. ++..++..+|.+.+
T Consensus 55 ~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~-~g~~~~~~~g~~~~ 133 (368)
T cd08300 55 LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMP-DGTSRFSCKGKPIY 133 (368)
T ss_pred CCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccC-CCccccccCCcccc
Confidence 67999999999999999999999999999999999999999999999999998754322222211 11122223333333
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|+||+.++++.++++|+++++++++++++++.|||+++....++++|++|||+|+|++|++++|+|+.+|+++
T Consensus 134 ~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~ 213 (368)
T cd08300 134 HFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASR 213 (368)
T ss_pred cccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 33345799999999999999999999999999999999999998778889999999999999999999999999999967
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
|++++.++++.++++++|++.++++.+.++++.+.+++++++++|+|||++|....+..+++++++++|+++.+|.....
T Consensus 214 vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~ 293 (368)
T cd08300 214 IIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG 293 (368)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC
Confidence 99999999999999999999999876543347777888877789999999998778999999997733999999875322
Q ss_pred CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
......+..+.+...+.++..+.+...+++.++++++.++++.+.++++++|+|+|+++||+.+.+++..|++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 294 QEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred CccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 122222222233456667666555545678899999999999887888999999999999999998888899874
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.8e-45 Score=336.84 Aligned_cols=316 Identities=53% Similarity=1.022 Sum_probs=253.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccccc--CCCc
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSI--KGKP 89 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~ 89 (329)
.+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|.+|..|+++.|++.......+....++..++.. .+.+
T Consensus 64 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (381)
T PLN02740 64 AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQP 143 (381)
T ss_pred CCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCc
Confidence 57999999999999999999999999999999999999999999999999998854321000000000000000 0001
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
.++....|+|+||+++|.+.++++|+++++++++.+++++.|||+++...+++++|++|||+|+|++|++++|+|+.+|+
T Consensus 144 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~ 223 (381)
T PLN02740 144 IYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGA 223 (381)
T ss_pred ccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 11122358999999999999999999999999999999999999987788899999999999999999999999999998
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
++|++++++++++++++++|++.+++..+.+.++.+.+++++++++|+|||++|.+..+..+++++++++|+++.+|...
T Consensus 224 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~ 303 (381)
T PLN02740 224 SKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHP 303 (381)
T ss_pred CcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCC
Confidence 67999999999999999999999888765333477778877766899999999988889999999987339999998754
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 327 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~ 327 (329)
....+++.+..+.++.++.|+..+.+....++.++++++.++.+.++++++++|+|+|+++|++.+.+++..|++|.+
T Consensus 304 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 304 TPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 432233333324468899988776654445688999999999988888889999999999999999988888999864
No 11
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-45 Score=310.11 Aligned_cols=289 Identities=27% Similarity=0.440 Sum_probs=243.3
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEee-cCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP-VFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
..+|+++|||.+|+|+++|++|++|++||||=+ ..+.+|.+|++|.+|.+++|++.-. +-+|+ -.||
T Consensus 63 s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~---------~~DG-- 130 (360)
T KOG0023|consen 63 SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGV---------YHDG-- 130 (360)
T ss_pred ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeE-ecccc---------ccCC--
Confidence 689999999999999999999999999999976 5556899999999999999995221 11122 1122
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
....|+|++|+++++.++++||++++++.||++.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+|+++|.
T Consensus 131 ---t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~ 206 (360)
T KOG0023|consen 131 ---TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM 206 (360)
T ss_pred ---CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc
Confidence 33357899999999999999999999999999999999999985 56788899999999997799999999999999
Q ss_pred CEEEEEcCCh-hhHHHHHhcCCceeeCCC-CCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 170 SRIIGVDLNP-SRFNEAKKFGVTEFVNPK-DYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 170 ~~vv~~~~~~-~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+|+++++++ +|.+.++.||++..++.. +. ++.+.+...+++++|-|.+. +...++.++.+++.+ |+++++|.
T Consensus 207 -rV~vis~~~~kkeea~~~LGAd~fv~~~~d~--d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~ 280 (360)
T KOG0023|consen 207 -RVTVISTSSKKKEEAIKSLGADVFVDSTEDP--DIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGL 280 (360)
T ss_pred -EEEEEeCCchhHHHHHHhcCcceeEEecCCH--HHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeC
Confidence 899999887 677788889999988776 44 38888888887788888766 446788999999998 99999998
Q ss_pred CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR 326 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~ 326 (329)
+.....++. ..+..+.+++.|+..++. .+.+++++++.++.+... .+..+++++++||++|++++- .|.||+
T Consensus 281 p~~~~~~~~-~~lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD 353 (360)
T KOG0023|consen 281 PEKPLKLDT-FPLILGRKSIKGSIVGSR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVD 353 (360)
T ss_pred cCCcccccc-hhhhcccEEEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence 776444333 334678899999999888 789999999999977543 589999999999999999985 499988
Q ss_pred eC
Q 047713 327 MD 328 (329)
Q Consensus 327 ~~ 328 (329)
+.
T Consensus 354 ~s 355 (360)
T KOG0023|consen 354 VS 355 (360)
T ss_pred cc
Confidence 64
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.5e-44 Score=329.61 Aligned_cols=303 Identities=34% Similarity=0.617 Sum_probs=249.9
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|||++|+|+++|++|+.|++||+|++.+..+|+.|.+|+.|+++.|...... .....+- +|....
T Consensus 53 ~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~--------~g~~~~ 123 (358)
T TIGR03451 53 EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLT--------DGTELS 123 (358)
T ss_pred cCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccc--------cCcccc
Confidence 5789999999999999999999999999999999999999999999999999752110 0000000 010000
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|+||+.+|+..++++|+++++++++.+++++.++|.++.....+++|++|||+|+|++|++++|+|+..|+++
T Consensus 124 ~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~ 203 (358)
T TIGR03451 124 PALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASK 203 (358)
T ss_pred cccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 00124899999999999999999999999999999999999988778888999999999999999999999999999966
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.++++++|++.++++.+.+ +.+.+++++++ ++|+|||++|.+..+..++++++++ |+++.+|....
T Consensus 204 Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~ 280 (358)
T TIGR03451 204 IIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTP 280 (358)
T ss_pred EEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC
Confidence 99999999999999999999999876655 77888888877 8999999999878899999999998 99999997543
Q ss_pred CCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 251 DDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
.....+.. ..+.++.++.+++.+.....++++++++++.++++.+.++++++|+++|+++|++.+++++..|++|.
T Consensus 281 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 281 DMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 22222222 34567888888765433334678889999999999888888999999999999999998887888875
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.4e-44 Score=325.22 Aligned_cols=286 Identities=29% Similarity=0.462 Sum_probs=244.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|++|+.|+++.|.+.... .|
T Consensus 53 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~g------------------ 112 (339)
T cd08239 53 YQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAA--YG------------------ 112 (339)
T ss_pred CCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccc--cc------------------
Confidence 3589999999999999999999999999999999999999999999999999864321 11
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
....|+|+||+.+|++.++++|++++++++++++++++|||+++ ....+++|++|||+|+|++|++++|+|+.+|+++
T Consensus 113 -~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~ 190 (339)
T cd08239 113 -WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAED 190 (339)
T ss_pred -cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 12357999999999999999999999999999999999999986 5678899999999999999999999999999955
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.++++++|++.++++.+.+ .+.+.+++++ ++|+|||++|+...+..++++++++ |+++.+|....
T Consensus 191 vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 266 (339)
T cd08239 191 VIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE 266 (339)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC
Confidence 99999999999999999999998875532 4556677766 8999999999877778899999998 99999987543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~ 327 (329)
. .......++.+++++.|++.... ++++++++++.++.+.+.++++++|+++++++|++.++++..+|+||.+
T Consensus 267 ~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 267 L-TIEVSNDLIRKQRTLIGSWYFSV---PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred c-ccCcHHHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 2 22222334568899998876443 5789999999999988888899999999999999999887767998864
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1e-43 Score=324.96 Aligned_cols=313 Identities=58% Similarity=1.049 Sum_probs=254.2
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..|+++.|++.... ..|+. .++.+++...|...
T Consensus 53 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~ 130 (365)
T cd08277 53 TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKI 130 (365)
T ss_pred CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCccc
Confidence 46789999999999999999999999999999999999999999999999999985432 11221 11222222222222
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+.+...|+|+||+.++++.++++|++++++++++++++++|||+++....++++|++|||+|+|++|++++|+|+.+|++
T Consensus 131 ~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~ 210 (365)
T cd08277 131 YHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS 210 (365)
T ss_pred ccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 22233589999999999999999999999999999999999999877888999999999999999999999999999987
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|+++++++++.+.++++|++++++..+.+..+.+.+++++++++|+|||++|....+..+++++++.+|+++.+|....
T Consensus 211 ~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 290 (365)
T cd08277 211 RIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG 290 (365)
T ss_pred eEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc
Confidence 79999999999999999999998887653323566777777668999999999878889999999762399999987543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
. ..++....+.+++++.|++.+.+..+.+++++++++.++.+.++++++++|+|+|+++|++.+.+++..|++++
T Consensus 291 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 291 A-ELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred c-ccccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 2 12222222334788888887766544578999999999988888889999999999999999988887788874
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.2e-43 Score=317.88 Aligned_cols=293 Identities=28% Similarity=0.410 Sum_probs=238.8
Q ss_pred CCCCc-ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 11 PLFPR-IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 11 ~~~P~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
..+|. ++|||++|+|+++| .++.+++||||++.|..+|+.|++|++|+++.|++...+ |..
T Consensus 52 ~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~---g~~-------------- 113 (350)
T COG1063 52 VPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFY---GYA-------------- 113 (350)
T ss_pred CCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCcccc---ccc--------------
Confidence 34455 99999999999999 778899999999999999999999999999999954321 100
Q ss_pred eeeccccccccccEEeeeccEEE-cCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAK-INPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
.+....+|+|+||+.+|.+++++ +|+++ ..+++++..++++++++.......+++.+|+|+|+|++|++++++|+..|
T Consensus 114 ~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~G 192 (350)
T COG1063 114 GLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLG 192 (350)
T ss_pred cccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00111358999999999765554 58888 67778899999999886445555666669999999999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 169 ASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+++|++++.+++|++++++ .+++.+++..+.+ ....+.+.+++ ++|++|||+|.+..+..++++++++ |+++.+|
T Consensus 193 a~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vG 269 (350)
T COG1063 193 ASVVIVVDRSPERLELAKEAGGADVVVNPSEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVG 269 (350)
T ss_pred CceEEEeCCCHHHHHHHHHhCCCeEeecCcccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEe
Confidence 9999999999999999999 5666666554433 67778888888 9999999999999999999999998 9999999
Q ss_pred cCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEE
Q 047713 247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCI 324 (329)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvv 324 (329)
..............+.|++++.|++.. ....+++.+++++.+|++.+.+++++.++++++++|++.+.+.+. .|++
T Consensus 270 v~~~~~~~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~ 347 (350)
T COG1063 270 VYGGEDIPLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVV 347 (350)
T ss_pred ccCCccCccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEE
Confidence 876654212223456799999998431 222679999999999999999999999999999999999987553 4888
Q ss_pred Eee
Q 047713 325 IRM 327 (329)
Q Consensus 325 v~~ 327 (329)
+.+
T Consensus 348 i~~ 350 (350)
T COG1063 348 LKP 350 (350)
T ss_pred ecC
Confidence 753
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.9e-43 Score=317.88 Aligned_cols=286 Identities=21% Similarity=0.351 Sum_probs=233.7
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+++|.++|||++|+|+++ +|++|++||||++.+..+|+.|++|+.|+++.|++.... |...
T Consensus 57 ~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~-------------- 117 (343)
T PRK09880 57 IKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAM-------------- 117 (343)
T ss_pred ccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccc--------------
Confidence 367999999999999999 789999999999999999999999999999999874321 1100
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+....+|+|+||++++++.++++|+++++++++ +..+++++|+++ ......+|++|+|+|+|++|++++|+|+.+|++
T Consensus 118 ~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~ 195 (343)
T PRK09880 118 YFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAA 195 (343)
T ss_pred ccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 001125899999999999999999999987644 566788999986 445666899999999999999999999999997
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++++++++++++++|++.++++.+.+ +.+.. +. .+++|+|||++|.+..++.++++++++ |+++.+|....
T Consensus 196 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~ 270 (343)
T PRK09880 196 EIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA 270 (343)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC
Confidence 799999999999999999999999876644 43322 22 236999999999878899999999998 99999997543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
...++. ...+.+++++.++... .++++++++++.++++.+.++++++|+|+|+++|++.+.+++. +|++|.+
T Consensus 271 ~~~~~~-~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 271 PPEFPM-MTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred CCccCH-HHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 322222 2345688888887642 2579999999999999887888999999999999999988775 5988863
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=8.9e-42 Score=313.59 Aligned_cols=297 Identities=22% Similarity=0.310 Sum_probs=228.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+.|+++.|.+..... ++..++. ...
T Consensus 60 ~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~~~g~----------~~~ 128 (393)
T TIGR02819 60 PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPAR-AGAAYGY----------VDM 128 (393)
T ss_pred CCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCC-ccceecc----------ccc
Confidence 57999999999999999999999999999999999999999999999999999743110 0000000 000
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCc----cchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPL----DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~ 165 (329)
...+|+|+||+.+|+. .++++|++++. .+++++.++++++|+++ ...++++|++|||.|+|++|++++|+|+
T Consensus 129 -~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk 206 (393)
T TIGR02819 129 -GGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQ 206 (393)
T ss_pred -CCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 0014799999999974 69999998653 34677888899999985 4578999999999888999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHhcCCceeeCCC-CCCchHHHHHHhhhcC-CccEEEEecCCH--------------HHHH
Q 047713 166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK-DYDKPVQQVIADMTNG-GVDRSVECTGSV--------------QAMI 229 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~-~~d~Vid~~g~~--------------~~~~ 229 (329)
.+|++.+++++.++++.++++++|++. ++.. +.+ +.+.+.+++++ ++|++||++|.+ ..++
T Consensus 207 ~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~~~--~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~ 283 (393)
T TIGR02819 207 LLGAAVVIVGDLNPARLAQARSFGCET-VDLSKDAT--LPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLN 283 (393)
T ss_pred HcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCccc--HHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHH
Confidence 999966777778889999999999974 4433 223 66778887776 899999999975 4799
Q ss_pred HHHHhhccCCeEEEEeccCCCCCccccc------------cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCc
Q 047713 230 SAFECVHDGWGVAVLVGVPNKDDAFKTH------------PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEK 297 (329)
Q Consensus 230 ~~~~~l~~~~G~vv~~g~~~~~~~~~~~------------~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~ 297 (329)
.++++++++ |+++.+|........... ...+.++.++.+.. ....+.+.++++++.++++++.+
T Consensus 284 ~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~ 359 (393)
T TIGR02819 284 SLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAK 359 (393)
T ss_pred HHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHH
Confidence 999999998 999999975321111110 11123445555421 11112246799999999998877
Q ss_pred cee-eeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713 298 FIT-HTVPFSEINKAFDLMLAGESIRCIIRMD 328 (329)
Q Consensus 298 ~~~-~~~~l~~i~~a~~~~~~~~~~kvvv~~~ 328 (329)
+++ ++|+|+|+++||+.+.+++..|++|.+.
T Consensus 360 ~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 360 AVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred ceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 776 7899999999999999887789999764
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-41 Score=307.01 Aligned_cols=289 Identities=24% Similarity=0.383 Sum_probs=238.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|++|..|+++.|.+....
T Consensus 52 ~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---------------------- 109 (347)
T PRK10309 52 YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFI---------------------- 109 (347)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCccee----------------------
Confidence 4689999999999999999999999999999999999999999999999999763211
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|+||+.+|++.++++|+++++++++.+. ++++++++ .....+++|++|||+|+|++|++++|+|+.+|++.
T Consensus 110 g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~ 187 (347)
T PRK10309 110 GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS 187 (347)
T ss_pred ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 11235799999999999999999999999888663 45567776 46678899999999999999999999999999966
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-Ccc-EEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVD-RSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d-~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
|+++++++++.++++++|++.+++..+.+ ...+.+++.+ ++| +||||+|....+..++++++++ |+++.+|...
T Consensus 188 v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~ 263 (347)
T PRK10309 188 VTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLH 263 (347)
T ss_pred EEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence 88899999999999999999988866532 3446666665 888 9999999888999999999998 9999998754
Q ss_pred CCCccccc--cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEE
Q 047713 250 KDDAFKTH--PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCI 324 (329)
Q Consensus 250 ~~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvv 324 (329)
.....+.. ...+.+++++.|++.+... ..++++++++++.++.+.++++++++|+|+|+++|++.+.+++. +|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv 343 (347)
T PRK10309 264 HDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVL 343 (347)
T ss_pred CCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEE
Confidence 43222211 1345688999997764321 13568899999999998888889999999999999999988875 5998
Q ss_pred EeeC
Q 047713 325 IRMD 328 (329)
Q Consensus 325 v~~~ 328 (329)
+++.
T Consensus 344 v~~~ 347 (347)
T PRK10309 344 LQIP 347 (347)
T ss_pred EeCC
Confidence 8763
No 19
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.6e-41 Score=306.35 Aligned_cols=285 Identities=24% Similarity=0.434 Sum_probs=238.9
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++++.+ +||+|++.+..+|+.|.+|+.|+++.|.+.... |
T Consensus 51 ~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g----------------- 109 (349)
T TIGR03201 51 HALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMP---G----------------- 109 (349)
T ss_pred CCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCcc---C-----------------
Confidence 3678999999999999999999987 999999999999999999999999999864321 1
Q ss_pred eeccccccccccEEeeeccEEEcCC------CCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINP------AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGA 164 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la 164 (329)
...+|+|+||+.+|++.++++|+ ++++++++++++++.++|+++. ...+++|++|+|+|+|++|++++|+|
T Consensus 110 --~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a 186 (349)
T TIGR03201 110 --NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTA 186 (349)
T ss_pred --cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 11247999999999999999999 8999999999999999999864 57889999999999999999999999
Q ss_pred HHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-chHHHHHHhhhcC-Ccc----EEEEecCCHHHHHHHHHhhccC
Q 047713 165 RVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVD----RSVECTGSVQAMISAFECVHDG 238 (329)
Q Consensus 165 ~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~-~~d----~Vid~~g~~~~~~~~~~~l~~~ 238 (329)
+.+|+ +|++++.++++.++++++|++.++++.+.+ .++.+.+++++++ ++| +|||++|....++.++++++++
T Consensus 187 ~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~ 265 (349)
T TIGR03201 187 KAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG 265 (349)
T ss_pred HHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence 99999 799999999999999999999988875542 2366777888876 776 8999999888888999999998
Q ss_pred CeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcC
Q 047713 239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318 (329)
Q Consensus 239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~ 318 (329)
|+++.+|.......+.. ..++.++.++.|++.... ++++++++++.++++.+.++++ .|+|+++++|++.++++
T Consensus 266 -G~iv~~G~~~~~~~~~~-~~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~ 339 (349)
T TIGR03201 266 -GTLVVVGYTMAKTEYRL-SNLMAFHARALGNWGCPP---DRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHH 339 (349)
T ss_pred -CeEEEECcCCCCcccCH-HHHhhcccEEEEEecCCH---HHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcC
Confidence 99999997544322222 223456778888764332 5789999999999988776664 79999999999999988
Q ss_pred cce-EEEEe
Q 047713 319 ESI-RCIIR 326 (329)
Q Consensus 319 ~~~-kvvv~ 326 (329)
+.. |++++
T Consensus 340 ~~~~k~~~~ 348 (349)
T TIGR03201 340 KLKRRAILT 348 (349)
T ss_pred CccceEEec
Confidence 754 77764
No 20
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=6.1e-42 Score=302.04 Aligned_cols=269 Identities=26% Similarity=0.396 Sum_probs=219.2
Q ss_pred ccCCcceEEEEEecCCCC------cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 16 IFGHEAGGIVESVGEGVT------DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 16 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
++|||++|+|+++|++|+ .|++||||++.+..+|+.|++|+.|+++.|++.... |+....
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---Cccccc-----------
Confidence 589999999999999999 899999999999999999999999999999874431 110000
Q ss_pred eeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 90 IYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
.+...+|+|+||+.+|++ .++++|+++++++++++++++.|+|+++ ......+|++|||+|+|++|++++|+|+.+|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 001135799999999997 7999999999999999999999999985 4456679999999999999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+++|++++.+++|.++++++|++.+++..+ ..+.+++++.+ ++|+|||++|.+..++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966888888999999999999998887643 34556666666 8999999999888899999999998 99999996
Q ss_pred CCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcC--CCCCCcceeeeeecccH
Q 047713 248 PNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK--ELEVEKFITHTVPFSEI 308 (329)
Q Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~~~~~l~~i 308 (329)
........+. ..++.+++++.|+..... ++++++++++.++ ++.++++++++|||+|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNYEP---RHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCCCH---HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 4322122222 234678999998764332 5789999999874 56677888999999874
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.4e-41 Score=307.30 Aligned_cols=286 Identities=20% Similarity=0.353 Sum_probs=226.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|||++|+|+++|++|+.|++||||++.+. .+|+.|++|+.|+++.|++..... .++ ..+|
T Consensus 65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~---------~~~g--- 131 (360)
T PLN02586 65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTY-NSI---------GHDG--- 131 (360)
T ss_pred CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccc-ccc---------ccCC---
Confidence 56899999999999999999999999999986554 479999999999999998743210 000 0000
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
...+|+|+||+++|++.++++|+++++++++++++++.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+
T Consensus 132 --~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga- 208 (360)
T PLN02586 132 --TKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL- 208 (360)
T ss_pred --CcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-
Confidence 11247999999999999999999999999999999999999987666667899999999999999999999999999
Q ss_pred EEEEEcCChhh-HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSR-FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|++++.++++ .+.++++|++.+++..+. +.+++.++ ++|+|||++|....++.++++++++ |+++.+|...
T Consensus 209 ~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~ 281 (360)
T PLN02586 209 KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE 281 (360)
T ss_pred EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC
Confidence 67766655544 556789999988876542 23444443 6999999999877889999999998 9999998654
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
....++. ..++.++..+.++..+.. ++++++++++.++++++ .+ ++|+|+|+++|++.+.+++. +|+|+.+
T Consensus 282 ~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~--~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 282 KPLELPI-FPLVLGRKLVGGSDIGGI---KETQEMLDFCAKHNITA--DI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CCCccCH-HHHHhCCeEEEEcCcCCH---HHHHHHHHHHHhCCCCC--cE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3322222 223456777777665433 56899999999998864 33 58999999999999998876 5888865
No 22
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.5e-41 Score=300.80 Aligned_cols=263 Identities=24% Similarity=0.370 Sum_probs=215.2
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|+|+|.|++|+|+++|++|+.|++||||+... ..|
T Consensus 56 ~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~~~------------------------------------------ 92 (326)
T COG0604 56 PLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-GVG------------------------------------------ 92 (326)
T ss_pred CCCCcccceeEEEEEEeCCCCCCcCCCCEEEEcc-CCC------------------------------------------
Confidence 5899999999999999999999999999999763 100
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
.+|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++++|++|||+|+ |++|++++|+||.+|+
T Consensus 93 ---~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~- 168 (326)
T COG0604 93 ---RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA- 168 (326)
T ss_pred ---CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence 14899999999999999999999999999999999999999999899999999999975 9999999999999998
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.++++++++++.++++++|+++++++.+++ +.+.+++++++ ++|+|||++|. +.+..++++|+++ |+++.++...
T Consensus 169 ~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~ 244 (326)
T COG0604 169 TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALS 244 (326)
T ss_pred cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCC
Confidence 566666777777799999999999998887 99999999998 99999999976 6888899999998 9999999876
Q ss_pred CCCccccc-cccccccceEEEeeecCC---CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc-Cc-ceEE
Q 047713 250 KDDAFKTH-PMNLLNERTLKGTFFGNY---KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA-GE-SIRC 323 (329)
Q Consensus 250 ~~~~~~~~-~~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~-~~-~~kv 323 (329)
+....... ..++.+.+...|...... ...+.+.++.+++.++.+ ++.+..+|||+|..++...... ++ .+|+
T Consensus 245 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l~e~~~a~a~~~~~~~~~GKv 322 (326)
T COG0604 245 GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERRTTGKV 322 (326)
T ss_pred CCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC--cceeccEechhhhHHHHHHHHcccCCcceE
Confidence 41111122 223446677777665433 112456778899999966 4557789999995555554332 34 4699
Q ss_pred EEee
Q 047713 324 IIRM 327 (329)
Q Consensus 324 vv~~ 327 (329)
||++
T Consensus 323 vl~~ 326 (326)
T COG0604 323 VLKV 326 (326)
T ss_pred EEeC
Confidence 8864
No 23
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.4e-40 Score=300.94 Aligned_cols=313 Identities=49% Similarity=0.907 Sum_probs=258.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.|++++|+......+.|.+ .++..+++-+|++.+
T Consensus 52 ~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 130 (365)
T cd05279 52 PLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIH 130 (365)
T ss_pred CCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccc
Confidence 4678999999999999999999999999999998889999999999999999876544333432 334444555666555
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|+.++++.++++|+++++++++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+..
T Consensus 131 ~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~ 210 (365)
T cd05279 131 HFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASR 210 (365)
T ss_pred cccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 55566899999999999999999999999999999999999998888889999999999988999999999999999966
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhc-cCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH-DGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~-~~~G~vv~~g~~~~ 250 (329)
|+++++++++.+.++++|++.+++..+.+.++.+.+++++++++|+|||++|....+..++++++ ++ |+++.++....
T Consensus 211 v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~ 289 (365)
T cd05279 211 IIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPS 289 (365)
T ss_pred EEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCC
Confidence 88888899999999999999888876652237777787775689999999987788899999999 97 99999986432
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
.....+....+.++.++.|.+...+...+.+..+++++.++.+.+.++..++|+++++++|++.+++++..|++|.
T Consensus 290 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 290 GTEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CCceeeCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 2222222222256777888776666555778899999999988776677899999999999999988877788773
No 24
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.5e-40 Score=300.82 Aligned_cols=314 Identities=51% Similarity=0.917 Sum_probs=248.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|+.++++.|++.......|+. .++..++-..|++..
T Consensus 59 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 137 (373)
T cd08299 59 PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIH 137 (373)
T ss_pred CCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccc
Confidence 5789999999999999999999999999999988899999999999999999875431111221 111122222233333
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|+||++++++.++++|+++++++++.+++++.+||+++....++++|++|+|+|+|++|++++++|+..|+.+
T Consensus 138 ~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~ 217 (373)
T cd08299 138 HFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASR 217 (373)
T ss_pred cccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 33335899999999999999999999999999999999999998888889999999999988999999999999999867
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhh-ccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV-HDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l-~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.+.++++|++.+++..+.+.++...+++++.+++|+++|++|.+..+..++..+ +++ |+++.+|....
T Consensus 218 Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~ 296 (373)
T cd08299 218 IIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPS 296 (373)
T ss_pred EEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCC
Confidence 9999999999999999999988887653323566666666568999999998777777777655 566 99999987543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~ 327 (329)
.....+.+..+.++.++.+...+.+...+++.++++.+.++.+.+++++++.|+++++++|++.+.+++..|+++.+
T Consensus 297 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 32233333234567788888776654445677788888887777777788999999999999999887777888763
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.7e-40 Score=303.69 Aligned_cols=286 Identities=21% Similarity=0.344 Sum_probs=228.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|++|+.|+++.|++..... .+.. ..
T Consensus 59 ~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~---------~~---- 124 (375)
T PLN02178 59 RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTY-NSRS---------SD---- 124 (375)
T ss_pred CCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccc-cccc---------cC----
Confidence 568999999999999999999999999999876665 69999999999999998743210 0000 00
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAK-PKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
+...+|+|+||+.+|++.++++|+++++++++++++++.|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+
T Consensus 125 -g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga 203 (375)
T PLN02178 125 -GTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL 203 (375)
T ss_pred -CCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC
Confidence 01124799999999999999999999999999999999999998644432 3689999999999999999999999999
Q ss_pred CEEEEEcCCh-hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNP-SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|++++.++ ++.+.++++|+++++++.+. +.+++.++ ++|+|||++|.+..+..++++++++ |+++.+|..
T Consensus 204 -~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~ 275 (375)
T PLN02178 204 -RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLP 275 (375)
T ss_pred -eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccC
Confidence 677777654 44788899999998876541 24444443 6999999999877889999999998 999999875
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
.....++. ...+.+++++.|+..+.. +++.++++++.+|++.+. + +.|||+|+++|++.+.+++. +|+|+.+
T Consensus 276 ~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 276 EKPLDLPI-FPLVLGRKMVGGSQIGGM---KETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CCCCccCH-HHHHhCCeEEEEeCccCH---HHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 43322222 233567888988776543 578899999999987643 4 67999999999999998876 5988875
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.4e-40 Score=298.17 Aligned_cols=271 Identities=21% Similarity=0.277 Sum_probs=225.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|||++|+|+++|++|+.|++||+|++.+.. +|+.|.+|..|+++.|++.... |
T Consensus 55 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g----------------- 114 (329)
T TIGR02822 55 RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---G----------------- 114 (329)
T ss_pred CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccC---C-----------------
Confidence 357999999999999999999999999999876654 7999999999999999874321 1
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
...+|+|+||+.+|+..++++|+++++++++++++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+
T Consensus 115 --~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~- 190 (329)
T TIGR02822 115 --WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA- 190 (329)
T ss_pred --cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-
Confidence 11257999999999999999999999999999999999999986 46889999999999999999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|+++++++++.++++++|++++++..+.. .+++|+++++.+.++.+..++++++++ |+++.+|....
T Consensus 191 ~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~ 258 (329)
T TIGR02822 191 TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT 258 (329)
T ss_pred eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc
Confidence 799999999999999999999988753211 126899999888888999999999998 99999997433
Q ss_pred CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
.. ..+. ...+.+++++.++..... +++.++++++.++++. +++++|+|+|+++|++.+.+++.. |+||
T Consensus 259 ~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 259 DT-PPLNYQRHLFYERQIRSVTSNTR---ADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred cC-CCCCHHHHhhCCcEEEEeecCCH---HHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 21 1122 223567888888764332 5678899999999774 457899999999999999988865 7765
No 27
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6e-41 Score=273.87 Aligned_cols=268 Identities=22% Similarity=0.242 Sum_probs=224.5
Q ss_pred cCCCCC--CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccc
Q 047713 5 KRWGQT--PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSR 82 (329)
Q Consensus 5 ~~~~~~--~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~ 82 (329)
-|.|.+ ++.|++||.|.+|+|+++|++|++|++||||+...
T Consensus 54 ~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~------------------------------------- 96 (336)
T KOG1197|consen 54 FRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLN------------------------------------- 96 (336)
T ss_pred HhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEEec-------------------------------------
Confidence 455654 47899999999999999999999999999998531
Q ss_pred cccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHH
Q 047713 83 FSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAA 161 (329)
Q Consensus 83 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai 161 (329)
..|.|+|++.+|...+.++|+.+++.++|++.+-+.|||..+++..++++|++||||. +|++|++++
T Consensus 97 ------------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~ 164 (336)
T KOG1197|consen 97 ------------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLC 164 (336)
T ss_pred ------------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHH
Confidence 2489999999999999999999999999999999999999999999999999999996 599999999
Q ss_pred HHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCe
Q 047713 162 EGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG 240 (329)
Q Consensus 162 ~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G 240 (329)
|+++..|+ +++++.++.+|.+.+++.|+++.++++.++ +.+.+.+++++ |+|+++|++|. +.+...+.+|++. |
T Consensus 165 Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G 239 (336)
T KOG1197|consen 165 QLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-G 239 (336)
T ss_pred HHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-c
Confidence 99999999 899999999999999999999999998877 99999999988 99999999987 7899999999998 9
Q ss_pred EEEEeccCCCCCccccccccccccceEEEeeecCCCCC-CC----HHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713 241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPR-SD----LPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 315 (329)
Q Consensus 241 ~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~----~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~ 315 (329)
.++.+|..++.........+--+++++.-.++-.+.+. .+ ..+++.++.++.+.+ .+.++|||+++.+|++++
T Consensus 240 ~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~--~I~~~ypls~vadA~~di 317 (336)
T KOG1197|consen 240 KMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKI--HIDHVYPLSKVADAHADI 317 (336)
T ss_pred eEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccce--eeeeecchHHHHHHHHHH
Confidence 99999987765433222222334555433232222221 12 346777788887754 488999999999999999
Q ss_pred HcCcce-EEEEeeC
Q 047713 316 LAGESI-RCIIRMD 328 (329)
Q Consensus 316 ~~~~~~-kvvv~~~ 328 (329)
++.++. |+++...
T Consensus 318 esrktvGkvlLlp~ 331 (336)
T KOG1197|consen 318 ESRKTVGKVLLLPG 331 (336)
T ss_pred HhhhccceEEEeCC
Confidence 998865 8777653
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.5e-39 Score=295.80 Aligned_cols=298 Identities=25% Similarity=0.413 Sum_probs=242.8
Q ss_pred CCCCcccCCcceEEEEEecCCCCc------CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccc
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTD------LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS 84 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~ 84 (329)
..+|.++|||++|+|+++|++|+. |++||+|++.+.++|+.|.+|+.++++.|.+...+ |...+.+.
T Consensus 52 ~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~---- 124 (361)
T cd08231 52 VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD---- 124 (361)
T ss_pred CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC----
Confidence 467899999999999999999986 99999999999999999999999999999875432 21111000
Q ss_pred cCCCceeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713 85 IKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG 163 (329)
Q Consensus 85 ~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l 163 (329)
....|+|+||+.++++ .++++|+++++++++.++++++|||+++......++|++|||+|+|.+|++++++
T Consensus 125 --------~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~l 196 (361)
T cd08231 125 --------PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAA 196 (361)
T ss_pred --------CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 0124799999999996 7999999999999888889999999998666666799999999889999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-chHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeE
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGV 241 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~ 241 (329)
|+.+|+++|+++++++++.++++++|++.+++..+.+ ..+...+++++++ ++|++||++|+...+..++++++++ |+
T Consensus 197 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~ 275 (361)
T cd08231 197 AKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GT 275 (361)
T ss_pred HHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CE
Confidence 9999987788888999999999999999888776533 1133567777776 8999999998877889999999998 99
Q ss_pred EEEeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcC--CCCCCcceeeeeecccHHHHHHHHHcC
Q 047713 242 AVLVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK--ELEVEKFITHTVPFSEINKAFDLMLAG 318 (329)
Q Consensus 242 vv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~~~~~l~~i~~a~~~~~~~ 318 (329)
++.+|.........+.. .++.++.++.++..... +++.++++++.++ .+.+.++++++|+++++++|++.+.++
T Consensus 276 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~ 352 (361)
T cd08231 276 YVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP---SHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESG 352 (361)
T ss_pred EEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc---hhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcC
Confidence 99998654322222222 23567888888765333 5788899999887 556677788999999999999999888
Q ss_pred cceEEEEee
Q 047713 319 ESIRCIIRM 327 (329)
Q Consensus 319 ~~~kvvv~~ 327 (329)
...|+||.+
T Consensus 353 ~~~k~vi~~ 361 (361)
T cd08231 353 TALKVVIDP 361 (361)
T ss_pred CceEEEeCC
Confidence 777998863
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=6e-39 Score=292.20 Aligned_cols=285 Identities=28% Similarity=0.498 Sum_probs=240.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|.+|..|+++.|...... |+
T Consensus 63 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------- 122 (351)
T cd08233 63 TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GL----------------- 122 (351)
T ss_pred CCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---cc-----------------
Confidence 3689999999999999999999999999999999999999999999999999853210 10
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
...+|+|+||+.++.+.++++|+++++++++.+ .++.+||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+++
T Consensus 123 -~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~ 199 (351)
T cd08233 123 -GGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASK 199 (351)
T ss_pred -CCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 001479999999999999999999999988765 6778999986 7788999999999998999999999999999977
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.++++++|++.++++.+.+ +.+.+++.+++ ++|+|||++|....++.++++++++ |+++.+|....
T Consensus 200 v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 276 (351)
T cd08233 200 IIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEK 276 (351)
T ss_pred EEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCC
Confidence 88998999999999999999999887665 88888888877 7999999998777899999999998 99999987553
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccH-HHHHHHHHcCcc--eEEEEe
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI-NKAFDLMLAGES--IRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i-~~a~~~~~~~~~--~kvvv~ 326 (329)
...++ ....+.+++++.+..... .++++++++++.++.+++.++++++|+++|+ ++|++.+.+++. +|+||.
T Consensus 277 ~~~~~-~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 277 PISFN-PNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred CCccC-HHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 22222 122356788998876433 2679999999999998877778899999996 799999988874 588763
No 30
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=4.1e-39 Score=293.62 Aligned_cols=282 Identities=26% Similarity=0.390 Sum_probs=220.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++ +.|++||||+..+..+|+.|.+|+.|+++.|.+.... ..|+
T Consensus 56 ~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~----------------- 116 (355)
T cd08230 56 EDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGI----------------- 116 (355)
T ss_pred CCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCc-----------------
Confidence 46899999999999999999 9999999999998889999999999999999864321 1111
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh------hccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV------NVAKPKKGQSVAIFGLGAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~iG~aai~la~ 165 (329)
...+|+|+||+.+|++.++++|++++ +++++..++++++.++. ...++++|++|+|+|+|++|++++|+|+
T Consensus 117 -~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak 193 (355)
T cd08230 117 -KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLR 193 (355)
T ss_pred -CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHH
Confidence 01247999999999999999999998 34555566666554432 2233678999999999999999999999
Q ss_pred HcCCCEEEEEcC---ChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713 166 VSGASRIIGVDL---NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242 (329)
Q Consensus 166 ~~G~~~vv~~~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v 242 (329)
.+|+ +|+++++ +++++++++++|++. +++.+.+ +.+ .+ ..+++|+|||++|.+..+..++++++++ |++
T Consensus 194 ~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~ 265 (355)
T cd08230 194 LRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVV 265 (355)
T ss_pred HcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEE
Confidence 9999 7888876 688999999999986 4554433 333 11 1248999999999877889999999998 999
Q ss_pred EEeccCCCCCccccc-----cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCC----CCCcceeeeeecccHHHHHH
Q 047713 243 VLVGVPNKDDAFKTH-----PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEL----EVEKFITHTVPFSEINKAFD 313 (329)
Q Consensus 243 v~~g~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l----~~~~~~~~~~~l~~i~~a~~ 313 (329)
+.+|.........+. ..++.+++++.|+..... ++++++++++.++.+ .++++++++|+++|+++|++
T Consensus 266 v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~ 342 (355)
T cd08230 266 ILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK---RHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALT 342 (355)
T ss_pred EEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch---hhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHH
Confidence 999976542222222 234568899999765443 678899999988762 35667899999999999999
Q ss_pred HHHcCcceEEEEee
Q 047713 314 LMLAGESIRCIIRM 327 (329)
Q Consensus 314 ~~~~~~~~kvvv~~ 327 (329)
.+.++. .|++|++
T Consensus 343 ~~~~~~-~K~v~~~ 355 (355)
T cd08230 343 EKPDGE-IKVVIEW 355 (355)
T ss_pred hcccCC-eEEEeeC
Confidence 886543 6998864
No 31
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.2e-38 Score=288.75 Aligned_cols=287 Identities=21% Similarity=0.331 Sum_probs=228.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|||++|+|+++|++|+.|++||+|++.+.. +|+.|.+|++|+++.|.+.......+. .
T Consensus 62 ~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~----------~----- 126 (357)
T PLN02514 62 NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY----------T----- 126 (357)
T ss_pred CCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc----------c-----
Confidence 568999999999999999999999999999876554 699999999999999986421100000 0
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
.+...+|+|+||+.+|...++++|+++++++++++++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+
T Consensus 127 ~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~- 205 (357)
T PLN02514 127 DGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH- 205 (357)
T ss_pred CCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-
Confidence 0111247999999999999999999999999999999999999987666666899999999889999999999999999
Q ss_pred EEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
++++++.++++.+ .++++|++.+++..+. ..+.+.+. ++|+|||++|....++.++++++++ |+++.+|...
T Consensus 206 ~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~ 278 (357)
T PLN02514 206 HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN 278 (357)
T ss_pred eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC
Confidence 6777777766654 4567999877765432 23444433 6999999999777899999999998 9999999764
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEeeC
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRMD 328 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~~ 328 (329)
....+. ...++.++.++.|++.+.. .+++++++++.++++ ++++ ++|+|+|+++|++.+.+++. .|+|+.++
T Consensus 279 ~~~~~~-~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l--~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 279 TPLQFV-TPMLMLGRKVITGSFIGSM---KETEEMLEFCKEKGL--TSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred CCCccc-HHHHhhCCcEEEEEecCCH---HHHHHHHHHHHhCCC--cCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 332222 1234568889998876544 578999999999975 3455 58999999999999998886 49998875
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.9e-37 Score=283.47 Aligned_cols=310 Identities=35% Similarity=0.637 Sum_probs=241.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+. +|+.|.+|+.++.+.|.........|...+..+.--..+|.+.+
T Consensus 54 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (365)
T cd08278 54 PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVH 132 (365)
T ss_pred CCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccc
Confidence 56889999999999999999999999999998764 89999999999999998644221111110000000000000000
Q ss_pred -eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 92 -HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 -~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+....|+|++|+.+++++++++|+++++++++.+++++.+|+.++.....+++|++|||+|+|.+|++++++|+..|++
T Consensus 133 ~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~ 212 (365)
T cd08278 133 GHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCT 212 (365)
T ss_pred cccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 0112479999999999999999999999999999999999999888888999999999998899999999999999997
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
++++++.++++.+.++++|++.+++..+.+ +.+.+.++++.++|+|+|++|....+..++++++++ |+++.+|....
T Consensus 213 ~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 289 (365)
T cd08278 213 TIIAVDIVDSRLELAKELGATHVINPKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPP 289 (365)
T ss_pred eEEEEeCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCC
Confidence 799999999999999999999888876654 777788777339999999998777889999999998 99999986532
Q ss_pred CCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 251 DDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
......... ++.++.++.++........+.++++++++.++.+.+.+++ ..|+++++++|++.+.+++..|++|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 290 GAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 212222222 2367788877665433333456788999999987543344 58999999999999998887898874
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.4e-37 Score=279.34 Aligned_cols=291 Identities=28% Similarity=0.392 Sum_probs=236.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|..|+++.|.+... |+.+.
T Consensus 52 ~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~----~~~~~-------------- 113 (351)
T cd08285 52 RHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLG----GWKFS-------------- 113 (351)
T ss_pred CCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCC----Ccccc--------------
Confidence 568999999999999999999999999999998888999999999999999986431 22110
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
...+|+|+||+.++.+ .++++|+++++++++.++.++.|||++ ....++++|++|||+|+|++|++++|+|+.+|+
T Consensus 114 -~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~ 191 (351)
T cd08285 114 -NFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGA 191 (351)
T ss_pred -CCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 1124799999999974 899999999999999999999999998 477889999999999889999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
++|+++++++++.++++++|++.+++..+.+ +...+.+++.+ ++|++||++|....+..++++++++ |+++.++..
T Consensus 192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 268 (351)
T cd08285 192 GRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYY 268 (351)
T ss_pred CeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEeccc
Confidence 7799999999999999999999998876655 77778777766 8999999999877889999999998 999999865
Q ss_pred CCCCcccccc--c-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCc-ceeeeeecccHHHHHHHHHcCc--ceE
Q 047713 249 NKDDAFKTHP--M-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEK-FITHTVPFSEINKAFDLMLAGE--SIR 322 (329)
Q Consensus 249 ~~~~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~-~~~~~~~l~~i~~a~~~~~~~~--~~k 322 (329)
.......... . ...+..++.+.... ...+.++++++++.++++.+.. ...+.++++++++|++.+++++ ..|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 346 (351)
T cd08285 269 GEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK 346 (351)
T ss_pred CCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEE
Confidence 4322112111 1 11334455543321 1236788999999999887743 3445699999999999999876 369
Q ss_pred EEEee
Q 047713 323 CIIRM 327 (329)
Q Consensus 323 vvv~~ 327 (329)
++|++
T Consensus 347 ~~~~~ 351 (351)
T cd08285 347 PVIIF 351 (351)
T ss_pred EEEeC
Confidence 99864
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.2e-36 Score=274.60 Aligned_cols=309 Identities=39% Similarity=0.724 Sum_probs=244.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|+|++|+|+++|++++.|++||+|++.+..+|++|++|++++.+.|........ | ...++..++.-+|.+.+
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 129 (363)
T cd08279 52 PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-G-QLPDGTRRFTADGEPVG 129 (363)
T ss_pred CCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccc-c-ccCCCcccccccCcccc
Confidence 567899999999999999999999999999999999999999999999999975321000 0 00000111111233333
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|++|+.++++.++++|+++++++++.+++++.+||.++....++++|++|||+|+|.+|++++++|+..|+.+
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~ 209 (363)
T cd08279 130 AMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASR 209 (363)
T ss_pred ccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 33446899999999999999999999999999999999999998888889999999999988999999999999999955
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.+.++++|++++++....+ +...+++++.+ ++|++||+++....+..++++++++ |+++.++....
T Consensus 210 Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~ 286 (363)
T cd08279 210 IIAVDPVPEKLELARRFGATHTVNASEDD--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPP 286 (363)
T ss_pred EEEEcCCHHHHHHHHHhCCeEEeCCCCcc--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCC
Confidence 89998999999999999998888876654 77778877755 8999999998777889999999998 99999986442
Q ss_pred CCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713 251 DDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 325 (329)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv 325 (329)
........ .+..++..+.+..++.....+.++++++++.++.+.+.+++.++|+++++++|++.+.+++..|.||
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 287 GETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 11222222 2233566666665543333467888999999998876555778999999999999999887776665
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=4.8e-36 Score=271.80 Aligned_cols=284 Identities=20% Similarity=0.311 Sum_probs=230.4
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..++++.|.+... +
T Consensus 52 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 109 (339)
T PRK10083 52 KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV----------------------L 109 (339)
T ss_pred CCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce----------------------E
Confidence 568999999999999999999999999999999999999999999999999975321 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV-SGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~-~G~~ 170 (329)
+...+|+|+||+.++.+.++++|+++++++++ +..++.+++. +....++++|++|+|+|+|.+|++++|+|+. +|++
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~ 187 (339)
T PRK10083 110 GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVK 187 (339)
T ss_pred EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCC
Confidence 11124799999999999999999999988765 5677788885 5677899999999999999999999999996 6997
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.++++++++++.++++++|++.+++..+.+ +.+.+.. .+ ++|+|||++|.+..+..++++++++ |+++.+|...
T Consensus 188 ~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 262 (339)
T PRK10083 188 AVIVADRIDERLALAKESGADWVINNAQEP--LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSS 262 (339)
T ss_pred EEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence 788899999999999999999998876543 5555533 23 5789999999777899999999998 9999998754
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEEee
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCIIRM 327 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv~~ 327 (329)
...... ......+++++.+... ..+.++++++++.++.+.+.+++++.|+++++++|++.++++. . .|+++.+
T Consensus 263 ~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 263 EPSEIV-QQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred CCceec-HHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 322111 1122346666666543 2257889999999998876555779999999999999998653 3 5999987
Q ss_pred CC
Q 047713 328 DG 329 (329)
Q Consensus 328 ~~ 329 (329)
.+
T Consensus 338 ~~ 339 (339)
T PRK10083 338 AE 339 (339)
T ss_pred CC
Confidence 64
No 36
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=6e-37 Score=277.55 Aligned_cols=271 Identities=19% Similarity=0.221 Sum_probs=206.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|||++|+|+++|.+ .|++||||++.+..+|+ |..| +..+.|.+.... |
T Consensus 57 ~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g------------------ 110 (341)
T cd08237 57 KLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---S------------------ 110 (341)
T ss_pred CCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCccee---E------------------
Confidence 57999999999999998864 79999999998888888 4456 345667654321 1
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCCeEEEEcCCHHHHHHHHHHHH-cC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGLGAVGLAAAEGARV-SG 168 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~iG~aai~la~~-~G 168 (329)
...+|+|+||+++|+++++++|++++++++| +..+++++|+++.. ...+++|++|||+|+|++|++++|+|+. .|
T Consensus 111 -~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g 188 (341)
T cd08237 111 -SGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYP 188 (341)
T ss_pred -ecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcC
Confidence 1124799999999999999999999998765 55688899988643 3457899999999999999999999986 66
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG---SVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~ 244 (329)
..+|++++.+++|++++++++.+..++ +...+ ++|+|||++| .+..++.++++++++ |+++.
T Consensus 189 ~~~vi~~~~~~~k~~~a~~~~~~~~~~-------------~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~ 254 (341)
T cd08237 189 ESKLVVFGKHQEKLDLFSFADETYLID-------------DIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGL 254 (341)
T ss_pred CCcEEEEeCcHhHHHHHhhcCceeehh-------------hhhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEE
Confidence 558999999999999998866543221 11123 6999999999 456889999999998 99999
Q ss_pred eccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcC---CCCCCcceeeeeeccc---HHHHHHHHHcC
Q 047713 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK---ELEVEKFITHTVPFSE---INKAFDLMLAG 318 (329)
Q Consensus 245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~---~l~~~~~~~~~~~l~~---i~~a~~~~~~~ 318 (329)
+|.......++. ..++.+++++.|+..... ++++++++++.++ +..+++++++.|++++ +.++++.+.++
T Consensus 255 ~G~~~~~~~~~~-~~~~~k~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~ 330 (341)
T cd08237 255 MGVSEYPVPINT-RMVLEKGLTLVGSSRSTR---EDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN 330 (341)
T ss_pred EeecCCCcccCH-HHHhhCceEEEEecccCH---HHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc
Confidence 997543322221 234578889998764322 5688999999998 3357778899999865 55555555444
Q ss_pred cceEEEEeeC
Q 047713 319 ESIRCIIRMD 328 (329)
Q Consensus 319 ~~~kvvv~~~ 328 (329)
..+|+||.++
T Consensus 331 ~~gKvvi~~~ 340 (341)
T cd08237 331 SWGKTVMEWE 340 (341)
T ss_pred CcceEEEEee
Confidence 4569999875
No 37
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5e-36 Score=272.53 Aligned_cols=290 Identities=33% Similarity=0.470 Sum_probs=236.9
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+++|.++|+|++|+|+++|++++++++||+|++.+..+||.|.+|+.|.+..|.+.......+
T Consensus 52 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 114 (347)
T cd05278 52 AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG----------------- 114 (347)
T ss_pred CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-----------------
Confidence 456899999999999999999999999999999999999999999999999998744321111
Q ss_pred eeccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 91 YHFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
....|+|++|++++++ +++++|+++++++++++++++.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|
T Consensus 115 --~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g 191 (347)
T cd05278 115 --NRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLG 191 (347)
T ss_pred --cCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 1124799999999997 8999999999999999999999999986 6788999999999888999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
..+++++++++++.+.++++|++.+++..+.+ +.+.++.++++ ++|++||++|....+..++++|+++ |+++.+|.
T Consensus 192 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~ 268 (347)
T cd05278 192 AARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGV 268 (347)
T ss_pred CCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcC
Confidence 65788888888999999999998888876654 77778877776 8999999998767889999999998 99999985
Q ss_pred CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEEE
Q 047713 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCII 325 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvvv 325 (329)
.............+.++.++.+..... .+.++++++++.++.+.+.+.+...|+++++++|++.+.+++. .|+|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv 345 (347)
T cd05278 269 YGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVI 345 (347)
T ss_pred CCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEe
Confidence 433221112222245666666543322 3568889999999987654446788999999999999887765 48776
Q ss_pred e
Q 047713 326 R 326 (329)
Q Consensus 326 ~ 326 (329)
+
T Consensus 346 ~ 346 (347)
T cd05278 346 R 346 (347)
T ss_pred c
Confidence 5
No 38
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4.9e-36 Score=276.06 Aligned_cols=305 Identities=28% Similarity=0.399 Sum_probs=237.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc-e
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP-I 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 90 (329)
++|.++|||++|+|+++|++++++++||+|++.+..+||.|.+|..++++.|++....+..-..++ ..+..+.|.. .
T Consensus 53 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 130 (386)
T cd08283 53 KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYG--HAGAGIFGYSHL 130 (386)
T ss_pred CCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccc--cccccccccccc
Confidence 468999999999999999999999999999999999999999999999999987543210000000 0000000000 0
Q ss_pred eeccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 91 YHFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
. ....|+|++|+.++++ .++++|++++++++++++++++|||+++ ....+++|++|||+|+|.+|++++++|+..|
T Consensus 131 ~-~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g 208 (386)
T cd08283 131 T-GGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLG 208 (386)
T ss_pred c-CCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 0 0124799999999988 8999999999999999999999999987 7788999999999988999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCC---------------------HH
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGS---------------------VQ 226 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~---------------------~~ 226 (329)
+.++++++.++++.+++++++...++++.+.+ ++.+.+++++.+ ++|+|||++|+ ..
T Consensus 209 ~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~ 287 (386)
T cd08283 209 AERVIAIDRVPERLEMARSHLGAETINFEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPD 287 (386)
T ss_pred CCEEEEEcCCHHHHHHHHHcCCcEEEcCCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchH
Confidence 86699999999999999998544566654431 377778888777 89999999974 34
Q ss_pred HHHHHHHhhccCCeEEEEeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeec
Q 047713 227 AMISAFECVHDGWGVAVLVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305 (329)
Q Consensus 227 ~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l 305 (329)
.+..++++++++ |+++.++..... ...... ..+.++.++.+.... ..+.++++++++.++++...+++.+.|++
T Consensus 288 ~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l 362 (386)
T cd08283 288 ALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPL 362 (386)
T ss_pred HHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecH
Confidence 678899999998 999999865432 122222 235677777775432 22568889999999988765556789999
Q ss_pred ccHHHHHHHHHcCc-c-eEEEEe
Q 047713 306 SEINKAFDLMLAGE-S-IRCIIR 326 (329)
Q Consensus 306 ~~i~~a~~~~~~~~-~-~kvvv~ 326 (329)
+++++|++.+.+++ . .|++|+
T Consensus 363 ~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 363 EDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHHHHHHHHHhCCCCeEEEEec
Confidence 99999999998876 3 598885
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=4e-36 Score=278.54 Aligned_cols=279 Identities=19% Similarity=0.232 Sum_probs=217.0
Q ss_pred CCCcccCCcceEEEEEecCCCC-cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|+++|||++|+|+++|++|+ .|++||||++.+...|+.|..|. ++ |
T Consensus 61 ~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~-~~-------------g----------------- 109 (410)
T cd08238 61 KEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCP-GY-------------S----------------- 109 (410)
T ss_pred CCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCC-Cc-------------c-----------------
Confidence 4789999999999999999998 69999999999988999998882 11 0
Q ss_pred eeccccccccccEEeeec----cEEEcCCCCCccchhcc-c--cc--ccchhhh-----hhhccCCCCCCeEEEEc-CCH
Q 047713 91 YHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVL-S--CG--ISTGFGA-----TVNVAKPKKGQSVAIFG-LGA 155 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~----~~~~~p~~~~~~~aa~~-~--~~--~~ta~~~-----l~~~~~~~~g~~VlI~G-ag~ 155 (329)
...+|+|+||+++|++ .++++|+++++++++.+ + ++ +.+++.. +...+++++|++|+|+| +|+
T Consensus 110 --~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~ 187 (410)
T cd08238 110 --YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGP 187 (410)
T ss_pred --ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCH
Confidence 1124799999999987 68999999999987743 2 21 1222222 12457889999999997 599
Q ss_pred HHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc--------CCc-eeeCCCCCCchHHHHHHhhhcC-CccEEEEecC
Q 047713 156 VGLAAAEGARVSG--ASRIIGVDLNPSRFNEAKKF--------GVT-EFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG 223 (329)
Q Consensus 156 iG~aai~la~~~G--~~~vv~~~~~~~~~~~~~~l--------g~~-~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g 223 (329)
+|++++|+|+.+| +.+|++++.+++|+++++++ |++ .++++.+. .++.+.+++++++ ++|+|||++|
T Consensus 188 vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g 266 (410)
T cd08238 188 MGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVP 266 (410)
T ss_pred HHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCC
Confidence 9999999999975 45799999999999999997 665 45665431 1377788888877 9999999999
Q ss_pred CHHHHHHHHHhhccCCeEEEEeccC-CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceee
Q 047713 224 SVQAMISAFECVHDGWGVAVLVGVP-NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~~G~vv~~g~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~ 301 (329)
.+..+..++++++++ |+++.++.. ......++. ..++.+++++.|+..+.. ++++++++++.++++.+.+++++
T Consensus 267 ~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~~~~it~ 342 (410)
T cd08238 267 VPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNT---DDMKEAIDLMAAGKLNPARMVTH 342 (410)
T ss_pred CHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCH---HHHHHHHHHHHcCCCchhhcEEE
Confidence 888999999999987 887776432 211111222 234568899998765433 57899999999999988888999
Q ss_pred eeecccHHHHHHHHHcCcceEEEEeeC
Q 047713 302 TVPFSEINKAFDLMLAGESIRCIIRMD 328 (329)
Q Consensus 302 ~~~l~~i~~a~~~~~~~~~~kvvv~~~ 328 (329)
+|+|+++++|++.+..+..+|+||..+
T Consensus 343 ~~~l~~~~~A~~~~~~~~~gKvvl~~~ 369 (410)
T cd08238 343 IGGLNAAAETTLNLPGIPGGKKLIYTQ 369 (410)
T ss_pred EecHHHHHHHHHHhhccCCceEEEECC
Confidence 999999999999998433469988763
No 40
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=9.4e-36 Score=269.23 Aligned_cols=278 Identities=22% Similarity=0.429 Sum_probs=230.5
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecC-CCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVF-TGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
++|.++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|..|+++.|...... |
T Consensus 53 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~----------------- 112 (333)
T cd08296 53 SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT---G----------------- 112 (333)
T ss_pred CCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCcc---C-----------------
Confidence 5688999999999999999999999999999855 457999999999999999864321 1
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+...|++++|+.++.+.++++|+++++++++.+++++.++|+++.. .+++++++|||+|+|.+|++++++|+.+|+
T Consensus 113 --~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~- 188 (333)
T cd08296 113 --VTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF- 188 (333)
T ss_pred --cccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence 1124799999999999999999999999999999999999998644 589999999999999999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++.++++.+.++++|++.+++..+.+ +.+.+++. +++|+++|++|.+..+..++++++++ |+++.+|....
T Consensus 189 ~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 263 (333)
T cd08296 189 RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE 263 (333)
T ss_pred eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC
Confidence 789998999999999999999888876554 66666655 36999999998778899999999998 99999987553
Q ss_pred CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713 251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR 326 (329)
Q Consensus 251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~ 326 (329)
. .++. ..++.++.++.+...+.. .+++.+++++.++.+. +++ +.|+++++.+|++.+.+++. +|+|++
T Consensus 264 ~--~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 264 P--VAVSPLQLIMGRKSIHGWPSGTA---LDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred C--CCcCHHHHhhcccEEEEeCcCCH---HHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 2 2222 223478889988764332 4678888888877654 344 68999999999999998876 588764
No 41
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.8e-35 Score=269.24 Aligned_cols=285 Identities=25% Similarity=0.392 Sum_probs=232.6
Q ss_pred CCCcccCCcceEEEEEecCCCC--cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 12 LFPRIFGHEAGGIVESVGEGVT--DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
++|.++|+|++|+|+++|++|+ .|++||+|++.+..+|+.|..|+.|.++.|..... .|+.
T Consensus 61 ~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-------------- 123 (350)
T cd08256 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQ-------------- 123 (350)
T ss_pred CCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeec--------------
Confidence 4688999999999999999999 89999999999999999999999999999975321 1110
Q ss_pred eeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713 90 IYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G 168 (329)
....|+|++|+.++++ .++++|+++++++++.+ .+++++|.++ ...++++|++|+|.|+|.+|++++++|+.+|
T Consensus 124 ---~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G 198 (350)
T cd08256 124 ---NNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN 198 (350)
T ss_pred ---cCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 0124799999999988 57899999999998887 8889999986 7789999999999778999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+..++++++++++.+.++++|++.+++..+.+ +.+.+.+++++ ++|++||++|....+..++++++++ |+++.++.
T Consensus 199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~ 275 (350)
T cd08256 199 PKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSV 275 (350)
T ss_pred CcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcc
Confidence 87788898899999999999998888776544 77778888777 8999999998666788899999998 99999975
Q ss_pred CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
...............+++++.++.... ..+.++++++.++.+.+.+++.+.|+++++++|++.+++++.. |+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 276 FGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CCCCCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 433222221111124566777665432 3688899999999887654567999999999999999987754 6653
No 42
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.5e-35 Score=272.75 Aligned_cols=289 Identities=25% Similarity=0.374 Sum_probs=231.3
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|+.|..|+++.|.+.... |
T Consensus 85 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g----------------- 144 (384)
T cd08265 85 TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKEL---G----------------- 144 (384)
T ss_pred cCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee---e-----------------
Confidence 35689999999999999999999999999999999999999999999999999864310 1
Q ss_pred eeccccccccccEEeeeccEEEcCCCCC------ccchhcccccccchhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAP------LDKVCVLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEG 163 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG~aai~l 163 (329)
....|+|++|+.++++.++++|++++ ..++++++.++++||+++... .++++|++|||+|+|.+|++++++
T Consensus 145 --~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~l 222 (384)
T cd08265 145 --FSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIAL 222 (384)
T ss_pred --ecCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHH
Confidence 11247999999999999999998642 233667788899999987666 689999999999889999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC-CchHHHHHHhhhcC-CccEEEEecCC-HHHHHHHHHhhccCCe
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNG-GVDRSVECTGS-VQAMISAFECVHDGWG 240 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~-~~d~Vid~~g~-~~~~~~~~~~l~~~~G 240 (329)
|+..|+.+|+++++++++.+.++++|++.+++..+. ..++.+.+++++.+ ++|+|+|++|. ...+..++++|+++ |
T Consensus 223 A~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G 301 (384)
T cd08265 223 AKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-G 301 (384)
T ss_pred HHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-C
Confidence 999998679999888999999999999888876643 11377788888877 89999999986 34778899999998 9
Q ss_pred EEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 241 ~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
+++.+|.......+.. .....+..++.+..... ....+.++++++.++.+.+..++.+.|+++++++|++.+.++..
T Consensus 302 ~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~ 378 (384)
T cd08265 302 KIVYIGRAATTVPLHL-EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTD 378 (384)
T ss_pred EEEEECCCCCCCcccH-HHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCC
Confidence 9999986543221111 22234556676654321 12468899999999988765557789999999999999776655
Q ss_pred eEEEE
Q 047713 321 IRCII 325 (329)
Q Consensus 321 ~kvvv 325 (329)
.|+|+
T Consensus 379 ~kvvv 383 (384)
T cd08265 379 GKITI 383 (384)
T ss_pred ceEEe
Confidence 57765
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.8e-35 Score=268.22 Aligned_cols=280 Identities=26% Similarity=0.420 Sum_probs=233.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|..|..|+.++|.+.... |+
T Consensus 56 ~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------- 115 (340)
T cd05284 56 KLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GI----------------- 115 (340)
T ss_pred CCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Cc-----------------
Confidence 5689999999999999999999999999999999999999999999999999876542 11
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-C
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEGARVSG-A 169 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG~aai~la~~~G-~ 169 (329)
...|+|++|+.+++++++++|+++++++++++++++.|||+++... ..+.++++|||+|+|.+|++++++|+.+| .
T Consensus 116 --~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~ 193 (340)
T cd05284 116 --GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA 193 (340)
T ss_pred --cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC
Confidence 1247999999999999999999999999999999999999987665 46889999999999789999999999999 6
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|+++++++++.+.++++|++++++..+. +...+++++++ ++|+|+|++|....+..++++++++ |+++.++..
T Consensus 194 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~ 268 (340)
T cd05284 194 -TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYG 268 (340)
T ss_pred -cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCC
Confidence 78888888999999999999888876543 66778887776 8999999998777889999999998 999999865
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
.. ..... ...+.++.++.+..... ...+..+++++.++.+.+ ..+.|+++++++|++.+++++.. |+++.
T Consensus 269 ~~-~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 269 GH-GRLPT-SDLVPTEISVIGSLWGT---RAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred CC-CccCH-HHhhhcceEEEEEeccc---HHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEec
Confidence 43 11221 11245777877765432 256888999999997753 34689999999999999988764 77764
No 44
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-35 Score=267.63 Aligned_cols=285 Identities=29% Similarity=0.503 Sum_probs=231.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|+.|+++.|++......
T Consensus 53 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 112 (343)
T cd05285 53 KEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAAT-------------------- 112 (343)
T ss_pred CCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCcccccc--------------------
Confidence 457899999999999999999999999999999999999999999999999986422100
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
....|+|++|++++++.++++|+++++++++.+ .++++|++++ ..+++++|++|||.|+|.+|++++|+|+.+|++.
T Consensus 113 -~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~ 189 (343)
T cd05285 113 -PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK 189 (343)
T ss_pred -ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 012479999999999999999999999998766 5788899885 7889999999999988999999999999999955
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCc-hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDK-PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
|+++++++++.++++++|++.+++..+.+. .+.+.+.+.+.+ ++|+|||++|+...+...+++++++ |+++.++...
T Consensus 190 v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 268 (343)
T cd05285 190 VVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGK 268 (343)
T ss_pred EEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence 888888999999999999999888765430 126677777776 8999999998766889999999998 9999998644
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEE
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCII 325 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv 325 (329)
.....++. ....+++++.+.... .+.++++++++.++.+.+.+.+.++|+++++++|++.+.+++ . .|++|
T Consensus 269 ~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 269 PEVTLPLS-AASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred CCCccCHH-HHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 32222211 234466666665422 156888999999997765455678999999999999998875 3 68887
No 45
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.5e-35 Score=267.68 Aligned_cols=289 Identities=27% Similarity=0.376 Sum_probs=232.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++|+.+++||+|++.+..+|+.|.+|+.+++..|++.... +.. +
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~---- 113 (344)
T cd08284 52 TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLF-GYA-------------G---- 113 (344)
T ss_pred CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccc-ccc-------------c----
Confidence 4578999999999999999999999999999999999999999999999999764221 000 0
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
....+|+|++|+.++++ .++++|+++++++++++++++.|||+++. ..++++|++|||+|+|.+|++++++|+.+|+
T Consensus 114 ~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~ 192 (344)
T cd08284 114 SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGA 192 (344)
T ss_pred cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 01124799999999975 99999999999999999999999999864 4788999999999889999999999999997
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
.+++++++++++.+.++++|+. .++....+ +...+.+++++ ++|++||++|....+..++++++++ |+++.+|..
T Consensus 193 ~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~ 268 (344)
T cd08284 193 ARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVH 268 (344)
T ss_pred ceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcC
Confidence 5788888888999999999975 34444433 77788887776 8999999998777889999999998 999999875
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
............+.++.++.+.. ....+.++++++++.++.+.+.+++.+.+++++++++++.+++++..|+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 269 TAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 53221111222345677766432 1223678899999999988765556789999999999999887766777764
No 46
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=8.7e-35 Score=263.80 Aligned_cols=285 Identities=26% Similarity=0.385 Sum_probs=229.9
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|||++|+|+++|++++.+++||+|++.+.++|+.|+.|+.+++++|......
T Consensus 56 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 113 (341)
T PRK05396 56 PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---------------------- 113 (341)
T ss_pred CCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCccee----------------------
Confidence 5688999999999999999999999999999999999999999999999999864211
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+...+|+|++|+.++.+.++++|+++++++++. ..++.+++.++.. ...+|++|+|.|+|.+|++++|+|+.+|+++
T Consensus 114 ~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~ 190 (341)
T PRK05396 114 GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH 190 (341)
T ss_pred eecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence 122357999999999999999999999888764 4566666655432 3468999999988999999999999999866
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+++++.++++.++++++|++.+++..+.+ +.+.+++++.+ ++|+|||+.|+...+..++++++++ |+++.++....
T Consensus 191 v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 267 (341)
T PRK05396 191 VVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG 267 (341)
T ss_pred EEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 88888889999999999999988876655 77888887766 8999999998878889999999998 99999986543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 328 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~ 328 (329)
...... .....++.++.++... ...+.+..+++++.++ +.+.+.+.+.++++++++|++.+.+++..|++++++
T Consensus 268 ~~~~~~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 268 DMAIDW-NKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred CCcccH-HHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 322222 3334567777765421 1124566788888887 445556778999999999999998877569998764
No 47
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=5.3e-35 Score=270.10 Aligned_cols=283 Identities=19% Similarity=0.278 Sum_probs=230.4
Q ss_pred CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713 14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF 93 (329)
Q Consensus 14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 93 (329)
|.++|||++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|.....+ |+ .
T Consensus 82 ~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~------------------~ 140 (393)
T cd08246 82 YHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GY------------------E 140 (393)
T ss_pred ccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---cc------------------c
Confidence 36999999999999999999999999999999999999999999999999753221 11 0
Q ss_pred cccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc--cCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 94 VGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV--AKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 94 ~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
...|+|++|+.+++..++++|+++++++++.++++++|||+++... +++++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 141 ~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~- 219 (393)
T cd08246 141 TNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA- 219 (393)
T ss_pred CCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence 1247999999999999999999999999999999999999987544 67899999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCC--------------------chHHHHHHhhhcC--CccEEEEecCCHHHH
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYD--------------------KPVQQVIADMTNG--GVDRSVECTGSVQAM 228 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--------------------~~~~~~~~~~~~~--~~d~Vid~~g~~~~~ 228 (329)
+++++++++++.+.++++|++.+++.++.+ ..+.+.+.+++++ ++|+|||++|. ..+
T Consensus 220 ~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~ 298 (393)
T cd08246 220 NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATF 298 (393)
T ss_pred eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhH
Confidence 677788899999999999999888764321 1255677777765 79999999986 678
Q ss_pred HHHHHhhccCCeEEEEeccCCCCC-ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeeccc
Q 047713 229 ISAFECVHDGWGVAVLVGVPNKDD-AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307 (329)
Q Consensus 229 ~~~~~~l~~~~G~vv~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~ 307 (329)
..++++++++ |+++.++...... ... ...++.++.++.+++...+ +.+..+++++.++.+. +.+++.|++++
T Consensus 299 ~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~l~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~l~--~~~~~~~~l~~ 371 (393)
T cd08246 299 PTSVFVCDRG-GMVVICAGTTGYNHTYD-NRYLWMRQKRIQGSHFAND---REAAEANRLVMKGRID--PCLSKVFSLDE 371 (393)
T ss_pred HHHHHHhccC-CEEEEEcccCCCCCCCc-HHHHhhheeEEEecccCcH---HHHHHHHHHHHcCCce--eeeeEEEeHHH
Confidence 8999999998 9999998643321 111 1223456777777765443 5688899999998765 34678999999
Q ss_pred HHHHHHHHHcC-cc-eEEEEe
Q 047713 308 INKAFDLMLAG-ES-IRCIIR 326 (329)
Q Consensus 308 i~~a~~~~~~~-~~-~kvvv~ 326 (329)
+++|++.+.++ +. .|+++-
T Consensus 372 ~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 372 TPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHHHHHHhCccccceEEEe
Confidence 99999999887 55 477664
No 48
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=8.3e-35 Score=264.35 Aligned_cols=287 Identities=31% Similarity=0.425 Sum_probs=236.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.+++||+|++.+...|++|++|..+.++.|....... |
T Consensus 53 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------ 112 (345)
T cd08286 53 TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWIL--G------------------ 112 (345)
T ss_pred CCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCccccc--c------------------
Confidence 45789999999999999999999999999999999999999999999998887531110 0
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
...+|+|++|+.++.+ .++++|++++..+++.+++++.+||.++....++++|++|||.|+|.+|++++|+|+.+|.
T Consensus 113 -~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~ 191 (345)
T cd08286 113 -NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSP 191 (345)
T ss_pred -cccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 1124799999999987 8999999999999999999999999877777889999999999889999999999999994
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
.+|++++.++++.+.++++|++.++++.+.+ +...+.+++.+ ++|+|||++|....++.+++.++++ |+++.+|..
T Consensus 192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~ 268 (345)
T cd08286 192 SKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVH 268 (345)
T ss_pred CeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEeccc
Confidence 4788898899999999999999888876554 77777777766 8999999998777889999999998 999999864
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc---ceEEEE
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE---SIRCII 325 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~---~~kvvv 325 (329)
........ ...+.++.++.+.... .+.+.++++++.++.+.+.++++++|++++++++++.+.+.. ..|++|
T Consensus 269 ~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~ 343 (345)
T cd08286 269 GKPVDLHL-EKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVII 343 (345)
T ss_pred CCCCCcCH-HHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEE
Confidence 43222221 1225577777764322 145788899999998776666779999999999999998763 459988
Q ss_pred ee
Q 047713 326 RM 327 (329)
Q Consensus 326 ~~ 327 (329)
++
T Consensus 344 ~~ 345 (345)
T cd08286 344 DF 345 (345)
T ss_pred eC
Confidence 64
No 49
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9e-35 Score=265.96 Aligned_cols=286 Identities=27% Similarity=0.421 Sum_probs=227.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|+.|.++.|++.... +.
T Consensus 72 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~----------------- 131 (364)
T PLN02702 72 KEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---AT----------------- 131 (364)
T ss_pred CCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CC-----------------
Confidence 3588999999999999999999999999999999999999999999999999863211 00
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
....|+|++|+.++++.++++|+++++++++. ..+++++++++ ...++.+|++|+|+|+|++|++++++|+.+|++.
T Consensus 132 -~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~ 208 (364)
T PLN02702 132 -PPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR 208 (364)
T ss_pred -CCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 01247999999999999999999999988764 23455677775 7788999999999988999999999999999977
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhh---hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADM---TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+++++.++++.+.++++|++..+++.....++.+.+.++ .++++|+|||++|.+..+..++++++++ |+++.+|..
T Consensus 209 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 287 (364)
T PLN02702 209 IVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMG 287 (364)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccC
Confidence 888988999999999999988776543222366665544 2348999999998778899999999998 999999864
Q ss_pred CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeec--ccHHHHHHHHHcCcc-eEEEE
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF--SEINKAFDLMLAGES-IRCII 325 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l--~~i~~a~~~~~~~~~-~kvvv 325 (329)
...... .......+++++.+.+.. ...+..+++++.++.+.+.+.+.+.|++ +++++|++.+++++. .|++|
T Consensus 288 ~~~~~~-~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~ 362 (364)
T PLN02702 288 HNEMTV-PLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMF 362 (364)
T ss_pred CCCCcc-cHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEE
Confidence 332111 112235677888876532 1467889999999988665567788665 799999999887765 48887
Q ss_pred e
Q 047713 326 R 326 (329)
Q Consensus 326 ~ 326 (329)
.
T Consensus 363 ~ 363 (364)
T PLN02702 363 N 363 (364)
T ss_pred e
Confidence 4
No 50
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1e-34 Score=263.74 Aligned_cols=285 Identities=27% Similarity=0.430 Sum_probs=235.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|.+|+.|+.+.|.+... .|
T Consensus 53 ~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------ 111 (345)
T cd08260 53 TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PG------------------ 111 (345)
T ss_pred CCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc---cc------------------
Confidence 458899999999999999999999999999987778999999999999999997432 11
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
....|+|++|+.+++. .++++|++++.++++.++.++.+||+++....++.++++|+|+|+|.+|++++++|+.+|+
T Consensus 112 -~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~ 190 (345)
T cd08260 112 -FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA 190 (345)
T ss_pred -cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 1124799999999985 8999999999999999999999999998778889999999999999999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|+++++++++.+.++++|++.+++..+ .+ +.+.+..+..+++|++||++|....+..++++++++ |+++.+|..
T Consensus 191 -~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~ 266 (345)
T cd08260 191 -RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLT 266 (345)
T ss_pred -eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCc
Confidence 7888888999999999999999988765 33 667777766558999999998767888999999998 999999864
Q ss_pred CCCCc-cccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 249 NKDDA-FKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 249 ~~~~~-~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
..... ...... ++.++.++.+..... .+.++++++++.++.+.+.+.+.+.++++++++|++.+++++.. |+|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 343 (345)
T cd08260 267 LGEEAGVALPMDRVVARELEIVGSHGMP---AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI 343 (345)
T ss_pred CCCCCccccCHHHHhhcccEEEeCCcCC---HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence 43221 122211 235677777765422 25788899999999876655567899999999999999887764 7665
No 51
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.2e-34 Score=263.74 Aligned_cols=284 Identities=26% Similarity=0.414 Sum_probs=234.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|+|++|+|+++|++++.+++||+|++.+...|+.|..|.+++.+.|...... |
T Consensus 65 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------ 123 (350)
T cd08240 65 KLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---G------------------ 123 (350)
T ss_pred CCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---e------------------
Confidence 4578999999999999999999999999999999999999999999999999763211 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
....|++++|+.++.+.++++|+++++.+++.+++++.+||+++.....++++++|+|+|+|.+|++++|+|+.+|+++
T Consensus 124 -~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~ 202 (350)
T cd08240 124 -IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPAN 202 (350)
T ss_pred -eeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCe
Confidence 1124799999999999999999999999999999999999998776666678999999988999999999999999977
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
|+++++++++.+.++++|++.+++..+.+ +.+.+.+..++++|++||++|....+..++++|+++ |+++.++.....
T Consensus 203 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~ 279 (350)
T cd08240 203 IIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE 279 (350)
T ss_pred EEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCC
Confidence 88888899999999999998888766544 666777766558999999998777899999999998 999999865443
Q ss_pred CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR 326 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~ 326 (329)
...... ....++.++.+...... +++.++++++.++.+.. .....|+++++++|++.+.+++. .|++++
T Consensus 280 ~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~ll~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 280 ATLPLP-LLPLRALTIQGSYVGSL---EELRELVALAKAGKLKP--IPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CcccHH-HHhhcCcEEEEcccCCH---HHHHHHHHHHHcCCCcc--ceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 222222 22347778877665433 56888999999987653 35678999999999999988775 487764
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.4e-34 Score=264.87 Aligned_cols=307 Identities=31% Similarity=0.518 Sum_probs=238.5
Q ss_pred CCCcccCCcceEEEEEecCCCCc---CCCCCEEeecCCCCCCCCCcccCCCCCCCcccccc--CCCCccccCCccc-ccc
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTD---LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN--TDRGVMINDGQSR-FSI 85 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~--~~~g~~~~~~~~~-~~~ 85 (329)
.+|.++|||++|+|+.+|++++. |++||+|++.+..+|+.|.+|..+++++|.....+ ..++. .+|..+ +..
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 129 (367)
T cd08263 52 PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL--YDGTTRLFRL 129 (367)
T ss_pred CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc--cCCccccccc
Confidence 56889999999999999999988 99999999999999999999999999999863210 00000 000000 000
Q ss_pred CCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713 86 KGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR 165 (329)
Q Consensus 86 ~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~ 165 (329)
.+.+.+. ...|+|++|+.++.+.++++|+++++.+++.++.++.|||.++.....++++++|||+|+|.+|++++++|+
T Consensus 130 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak 208 (367)
T cd08263 130 DGGPVYM-YSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAK 208 (367)
T ss_pred CCCcccc-ccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHH
Confidence 0000000 124799999999999999999999999999999999999999877788899999999988999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+|++++++++.++++.+.++++|++.+++..+.+ +...++...++ ++|+|||++|+.+.+..++++++++ |+++.
T Consensus 209 ~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~ 285 (367)
T cd08263 209 AFGASPIIAVDVRDEKLAKAKELGATHTVNAAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVV 285 (367)
T ss_pred HcCCCeEEEEeCCHHHHHHHHHhCCceEecCCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEE
Confidence 99995588888899999999999999898876655 77778877766 8999999998755788999999998 99999
Q ss_pred eccCCCCCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713 245 VGVPNKDDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R 322 (329)
Q Consensus 245 ~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k 322 (329)
++............. ++.++.++.++... ...+.++.+++++.++.+.+..++++.+++++++++++.+++++.. |
T Consensus 286 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~ 363 (367)
T cd08263 286 VGLAPGGATAEIPITRLVRRGIKIIGSYGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGR 363 (367)
T ss_pred EccCCCCCccccCHHHHhhCCeEEEecCCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccce
Confidence 986443211122212 22567777664321 1124678889999999877655567899999999999999988754 8
Q ss_pred EEEe
Q 047713 323 CIIR 326 (329)
Q Consensus 323 vvv~ 326 (329)
+||.
T Consensus 364 ~~~~ 367 (367)
T cd08263 364 AIVE 367 (367)
T ss_pred eeeC
Confidence 8763
No 53
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.9e-35 Score=260.88 Aligned_cols=251 Identities=22% Similarity=0.262 Sum_probs=193.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|+++ .|++||||++. |..|..|..+
T Consensus 57 ~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~~--------------------------------- 98 (308)
T TIGR01202 57 GYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVRG--------------------------------- 98 (308)
T ss_pred CCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccccc---------------------------------
Confidence 579999999999999999999 69999999873 2234332111
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
..|+|+||+.+|++.++++|++++++. +.+ ..++|||+++.. . ..++++|+|+|+|++|++++|+|+.+|++.
T Consensus 99 ---~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~ 171 (308)
T TIGR01202 99 ---LFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSP 171 (308)
T ss_pred ---cCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence 137999999999999999999998754 444 457899998644 3 346899999999999999999999999966
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
|++++.++++++.++++ .++++.+ . .+.++|+|||++|.+..++.++++++++ |+++.+|.....
T Consensus 172 v~~~~~~~~rl~~a~~~---~~i~~~~-------~----~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~ 236 (308)
T TIGR01202 172 PAVWETNPRRRDGATGY---EVLDPEK-------D----PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP 236 (308)
T ss_pred EEEeCCCHHHHHhhhhc---cccChhh-------c----cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC
Confidence 77787777777666543 3333321 0 1237999999999887889999999998 999999975433
Q ss_pred CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-ceEEEEe
Q 047713 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-SIRCIIR 326 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~~kvvv~ 326 (329)
..++. ...+.+++++.++.... .++++++++++.++++.+++++++.|||+|+++|++.+.++. ..|++|+
T Consensus 237 ~~~~~-~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 237 VNFDF-VPAFMKEARLRIAAEWQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ccccc-chhhhcceEEEEecccc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 22222 23356778888765432 257999999999999988888999999999999999877654 4688874
No 54
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.6e-34 Score=260.16 Aligned_cols=284 Identities=27% Similarity=0.417 Sum_probs=231.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..|+.+.|.+.... .
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------- 110 (345)
T cd08287 52 RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-G-------------------- 110 (345)
T ss_pred CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcc-c--------------------
Confidence 4588999999999999999999999999999877788999999999999999864321 0
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCccch-----hcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKV-----CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGA 164 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~a-----a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la 164 (329)
....|+|++|+.++.+ .++++|++++++.+ +++...+++|++++ ..+++++|++|+|.|+|.+|++++++|
T Consensus 111 -~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~la 188 (345)
T cd08287 111 -AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAA 188 (345)
T ss_pred -CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 1124799999999975 99999999987221 12335678888875 467899999999988899999999999
Q ss_pred HHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713 165 RVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243 (329)
Q Consensus 165 ~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv 243 (329)
+..|+++++++++++++.++++++|++.++++.+.+ +.+.+.+++++ ++|+++|++|++..+..++++++++ |+++
T Consensus 189 k~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v 265 (345)
T cd08287 189 KRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVG 265 (345)
T ss_pred HHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEE
Confidence 999997799998898899999999999999887654 77788887776 8999999998878899999999998 9999
Q ss_pred EeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceE
Q 047713 244 LVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIR 322 (329)
Q Consensus 244 ~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~k 322 (329)
.++...... .... ..+.++.++.+..... .+.++++++++.++.+.+.+++.+.++++++++|++.+.+.+..|
T Consensus 266 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k 340 (345)
T cd08287 266 YVGVPHGGV--ELDVRELFFRNVGLAGGPAPV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIK 340 (345)
T ss_pred EecccCCCC--ccCHHHHHhcceEEEEecCCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceE
Confidence 998654322 2222 3356788887643222 256888999999998876555678999999999999988877779
Q ss_pred EEEe
Q 047713 323 CIIR 326 (329)
Q Consensus 323 vvv~ 326 (329)
++|+
T Consensus 341 ~~~~ 344 (345)
T cd08287 341 VLLR 344 (345)
T ss_pred EEeC
Confidence 9885
No 55
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-34 Score=262.43 Aligned_cols=259 Identities=20% Similarity=0.284 Sum_probs=211.6
Q ss_pred CCCcccCC--cceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 12 LFPRIFGH--EAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 12 ~~P~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
.+|+++|+ |++|+|..+|++++.|++||+|+..
T Consensus 71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------- 105 (348)
T PLN03154 71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI--------------------------------------------- 105 (348)
T ss_pred CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence 36899998 8899999999999999999999843
Q ss_pred eeeccccccccccEEeeecc--EEE--cCCCCCcc-chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHH
Q 047713 90 IYHFVGTSTFSEYTVTHVGC--VAK--INPAAPLD-KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEG 163 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~l 163 (329)
|+|+||+.++++. +++ +|++++++ ++|++++++.|||+++....++++|++|||+|+ |++|++++|+
T Consensus 106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql 178 (348)
T PLN03154 106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL 178 (348)
T ss_pred -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence 5899999999853 544 48999986 688999999999999888889999999999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v 242 (329)
|+.+|+ +|+++++++++.++++ ++|++.++++.+.+ ++.+.+++.+++++|+|||++|. ..+..++++++++ |++
T Consensus 179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~i 254 (348)
T PLN03154 179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEP-DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRI 254 (348)
T ss_pred HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCcc-cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEE
Confidence 999999 7999989999999987 79999999876431 27777777766689999999986 6889999999998 999
Q ss_pred EEeccCCCCCc-c---c-cccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713 243 VLVGVPNKDDA-F---K-THPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 315 (329)
Q Consensus 243 v~~g~~~~~~~-~---~-~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~ 315 (329)
+.+|....... . . .....+.+++++.|+....+.. .+.++++++++.+|++.+ .+...|+|+++++|++.+
T Consensus 255 v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l 332 (348)
T PLN03154 255 AVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGL 332 (348)
T ss_pred EEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHH
Confidence 99986543211 0 0 1122456788888876543311 135778999999998753 466789999999999999
Q ss_pred HcCcc-eEEEEeeC
Q 047713 316 LAGES-IRCIIRMD 328 (329)
Q Consensus 316 ~~~~~-~kvvv~~~ 328 (329)
++++. +|+||++.
T Consensus 333 ~~g~~~GKvVl~~~ 346 (348)
T PLN03154 333 FSGKNVGKQVIRVA 346 (348)
T ss_pred HcCCCCceEEEEec
Confidence 99886 49999875
No 56
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.2e-34 Score=264.36 Aligned_cols=285 Identities=19% Similarity=0.283 Sum_probs=230.4
Q ss_pred cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeecc
Q 047713 15 RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFV 94 (329)
Q Consensus 15 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 94 (329)
.++|||++|+|+++|++++.|++||+|++.+...|+.|++|+.|+++.|...... |. ..
T Consensus 79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~------------------~~ 137 (398)
T TIGR01751 79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GY------------------ET 137 (398)
T ss_pred eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---cc------------------cC
Confidence 3899999999999999999999999999999999999999999999999754211 10 01
Q ss_pred ccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713 95 GTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR 171 (329)
Q Consensus 95 ~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~ 171 (329)
..|+|+||+.++++.++++|+++++++++.+++++.+||+++.. ..++++|++|+|+|+ |.+|++++++|+.+|+ +
T Consensus 138 ~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~ 216 (398)
T TIGR01751 138 NFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N 216 (398)
T ss_pred CCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence 24799999999999999999999999999999999999998654 467899999999987 9999999999999999 6
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCC--------------------chHHHHHHhhhcC-CccEEEEecCCHHHHHH
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYD--------------------KPVQQVIADMTNG-GVDRSVECTGSVQAMIS 230 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~ 230 (329)
++.++.++++.+.++++|++.+++.++.+ ..+.+.+.+++.+ ++|++||++|. ..+..
T Consensus 217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~ 295 (398)
T TIGR01751 217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPT 295 (398)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHH
Confidence 77777888999999999999999865421 1245566777776 89999999985 67889
Q ss_pred HHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHH
Q 047713 231 AFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310 (329)
Q Consensus 231 ~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~ 310 (329)
++++++++ |+++.+|..............+.++.++.++..... ++++++++++.++.+. +.+++.++++++++
T Consensus 296 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~--~~~~~~~~l~~~~~ 369 (398)
T TIGR01751 296 SVFVCRRG-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRID--PTLSKVYPLEEIGQ 369 (398)
T ss_pred HHHhhccC-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcc--cceeeEEcHHHHHH
Confidence 99999998 999999875432111111223345666776654433 4577889999988765 34678999999999
Q ss_pred HHHHHHcCcc-eEEEEeeC
Q 047713 311 AFDLMLAGES-IRCIIRMD 328 (329)
Q Consensus 311 a~~~~~~~~~-~kvvv~~~ 328 (329)
+++.+.+++. .|+|+++.
T Consensus 370 a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 370 AHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHHcCCCCceEEEEeC
Confidence 9999988775 49988875
No 57
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.6e-34 Score=258.49 Aligned_cols=275 Identities=21% Similarity=0.320 Sum_probs=219.8
Q ss_pred CCCcccCCcceEEEEEecCCCCc-CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTD-LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|+|++|+|+++|++++. |++||+|++.+..+|+.|+.|..|+..
T Consensus 62 ~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~----------------------------- 112 (341)
T cd08262 62 GADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP----------------------------- 112 (341)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-----------------------------
Confidence 46889999999999999999997 999999999999999999999544221
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
...|+|+||+.++.+.++++|+++++++++ ++.++++||++ ....++++|++|||+|+|.+|++++|+|+.+|++
T Consensus 113 ---~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~ 187 (341)
T cd08262 113 ---EAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187 (341)
T ss_pred ---CCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 114799999999999999999999998776 67788899998 5788999999999998899999999999999997
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCc--hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK--PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.++++++++++.++++++|++.+++..+.+. .+. .+.....+ ++|+|||++|....+..++++++++ |+++.++.
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~ 265 (341)
T cd08262 188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265 (341)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECC
Confidence 7888888999999999999988888655421 122 34444455 8999999998755778899999998 99999986
Q ss_pred CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
......... ...+.++.++.+.... ..+.+.++++++.++.+.+.+++.+.|++++++++++.+++++.. |+|++
T Consensus 266 ~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 266 CMESDNIEP-ALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCCCCccCH-HHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 533222111 1113466666654322 124688899999999887666667899999999999999988764 77763
No 58
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=9.2e-34 Score=257.00 Aligned_cols=286 Identities=28% Similarity=0.427 Sum_probs=231.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|+..+...|+.|..|..++...|...+..
T Consensus 54 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 111 (340)
T TIGR00692 54 KPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF---------------------- 111 (340)
T ss_pred CCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceE----------------------
Confidence 4577999999999999999999999999999999999999999999999999875321
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|+.++++.++++|++++.+. ++++.++.++++++ ....++|++|+|.|+|.+|++++|+|+.+|++.
T Consensus 112 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~ 188 (340)
T TIGR00692 112 GVDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP 188 (340)
T ss_pred eecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 111247999999999999999999999854 56778888888875 345678999999888999999999999999854
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.++++++|++.+++..+.+ +.+.+.+++++ ++|++||++|....+...+++++++ |+++.+|....
T Consensus 189 v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~ 265 (340)
T TIGR00692 189 VIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG 265 (340)
T ss_pred EEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC
Confidence 88888889999999999998888876655 77888887766 8999999998777889999999998 99999986533
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~ 327 (329)
.....+......++.++.+... ....+.+.++++++.++.+.+.+++.+.+++++++++++.+++++..|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 266 KVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred CcccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2222222233456666665442 11224577889999999886555678999999999999999877667888764
No 59
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.1e-33 Score=256.23 Aligned_cols=283 Identities=32% Similarity=0.531 Sum_probs=230.9
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|+.++.+.|......
T Consensus 52 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 109 (337)
T cd08261 52 SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVL---------------------- 109 (337)
T ss_pred CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCee----------------------
Confidence 4578999999999999999999999999999988899999999999999999642211
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|++|+.++++ ++++|+++++++++.+ ..+.+++.++ ...++++|++|||+|+|.+|++++|+|+.+|. +
T Consensus 110 ~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~ 185 (337)
T cd08261 110 GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-R 185 (337)
T ss_pred eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-e
Confidence 01124799999999999 9999999999998776 5677888875 77889999999999889999999999999999 7
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|+++++++++.++++++|++++++..+.+ +.+.+.+++++ ++|++||++|+...+..++++++++ |+++.++....
T Consensus 186 v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~ 262 (337)
T cd08261 186 VIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG 262 (337)
T ss_pred EEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC
Confidence 88888899999999999999999877655 77888887776 8999999998777889999999998 99999986543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv~~ 327 (329)
...... ..+..+++++.+... ...+.++++++++.++.+.+.+.+...+++++++++++.+++++ . .|+|+++
T Consensus 263 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 263 PVTFPD-PEFHKKELTILGSRN---ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred CCccCH-HHHHhCCCEEEEecc---CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 221111 122345666666532 22356888999999998765334678999999999999999873 4 5888764
No 60
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.6e-33 Score=255.43 Aligned_cols=284 Identities=28% Similarity=0.450 Sum_probs=228.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+.+|++++.+++||+|++.+..+|+.|+.|..|.++.|......
T Consensus 56 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 113 (341)
T cd05281 56 KPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKIL---------------------- 113 (341)
T ss_pred CCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceE----------------------
Confidence 4678999999999999999999999999999999999999999999999999753210
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|++++++.++++|++++.+ +++++.++.++++++. ...++|++|||.|+|.+|++++++|+.+|..+
T Consensus 114 ~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~ 190 (341)
T cd05281 114 GVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL 190 (341)
T ss_pred eccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 01124799999999999999999999874 4567777888888754 45578999999988999999999999999866
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|++++.++++.++++++|++++++..+.+ +. .++++.++ ++|++||++|+...+..++++|+++ |+++.++....
T Consensus 191 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 266 (341)
T cd05281 191 VIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG 266 (341)
T ss_pred EEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC
Confidence 88888889999999999998888765544 66 77777776 9999999998877889999999998 99999986443
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
.....+......++..+.+... ....+.+.++++++.++.+.+.+.+.+.++++++++|++.+.+++..|+|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 267 PVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred CcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 2222222223456667766542 1122467788999999987765667788999999999999988774488875
No 61
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.9e-33 Score=255.21 Aligned_cols=285 Identities=29% Similarity=0.474 Sum_probs=231.7
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|+.|..|+.+.|...... |
T Consensus 51 ~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------- 110 (343)
T cd08235 51 LKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKF---G----------------- 110 (343)
T ss_pred CCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCccee---c-----------------
Confidence 34578999999999999999999999999999999999999999999999999764321 0
Q ss_pred eeccccccccccEEeeecc-----EEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGC-----VAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR 165 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~ 165 (329)
....|+|++|+.++++. ++++|+++++.+++.+ +++.+||+++. ..++++|++|+|+|+|.+|++++++|+
T Consensus 111 --~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~ 186 (343)
T cd08235 111 --NLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAK 186 (343)
T ss_pred --cCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 11247999999999999 9999999999998765 78889999864 458999999999988999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
..|++.++++++++++.+.++++|.+.++++.+.+ +.+.+++++.+ ++|+|||+++....+...+++++++ |+++.
T Consensus 187 ~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~ 263 (343)
T cd08235 187 ASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILF 263 (343)
T ss_pred HcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence 99994488888899999999999998888877655 77778887776 8999999998777889999999998 99999
Q ss_pred eccCCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713 245 VGVPNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC 323 (329)
Q Consensus 245 ~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv 323 (329)
++........... .....++..+.+...... +.++++++++.++.+.+.+.+..+|+++++++|++.+.+++..|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~ 340 (343)
T cd08235 264 FGGLPKGSTVNIDPNLIHYREITITGSYAASP---EDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKI 340 (343)
T ss_pred EeccCCCCCcccCHHHHhhCceEEEEEecCCh---hhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEE
Confidence 9864332111111 122346666665543222 568889999999987654456788999999999999988873377
Q ss_pred EE
Q 047713 324 II 325 (329)
Q Consensus 324 vv 325 (329)
|+
T Consensus 341 vi 342 (343)
T cd08235 341 VI 342 (343)
T ss_pred Ee
Confidence 76
No 62
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.4e-33 Score=255.66 Aligned_cols=285 Identities=25% Similarity=0.407 Sum_probs=224.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|+|++|+|+++|++|++|++||+|++.+..+|+.|.+|..|+.+.|...... +... +
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~--------------~ 114 (339)
T cd08232 52 REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAM--------------R 114 (339)
T ss_pred cCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccce---eecc--------------c
Confidence 4678999999999999999999999999999999999999999999999999874211 0000 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
.....|+|++|+.++++.++++|+++++++++. ..+++++|+++.....+ ++++|||.|+|.+|++++|+|+.+|+.+
T Consensus 115 ~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~ 192 (339)
T cd08232 115 FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAE 192 (339)
T ss_pred cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 001247999999999999999999999998765 67888999986555555 8999999988999999999999999867
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+++++.++++.++++++|++.+++..+.+ + .++. .. ++|++||++|....++..+++|+++ |+++.++...
T Consensus 193 v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~ 265 (339)
T cd08232 193 IVATDLADAPLAVARAMGADETVNLARDP--L----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG 265 (339)
T ss_pred EEEECCCHHHHHHHHHcCCCEEEcCCchh--h----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence 88888888888899999998888765432 2 2222 22 6999999998767889999999998 9999998544
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
....... ...+.++.++.+... ..+.++++++++.++.+.+.+.+.++|+++++++|++.+.++.. .|+|+++
T Consensus 266 ~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 266 GPVPLPL-NALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CCccCcH-HHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 2211111 112456677766542 12468889999999987766667789999999999999987765 4888763
No 63
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2e-33 Score=254.39 Aligned_cols=282 Identities=27% Similarity=0.446 Sum_probs=232.5
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|+|++|+|+++|++++.+++||+|++.+..+|+.|++|..++.+.|...... |
T Consensus 55 ~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------ 113 (338)
T cd08254 55 KLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---G------------------ 113 (338)
T ss_pred CCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCcc---c------------------
Confidence 4578999999999999999999999999999999999999999999999988543211 1
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
....|+|++|+.++.+.++++|++++.+++++++.++.+||+++....+++++++|||.|+|.+|++++++|+..|+ +
T Consensus 114 -~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~ 191 (338)
T cd08254 114 -LGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-A 191 (338)
T ss_pred -cccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence 11247999999999999999999999999999999999999998888889999999998889999999999999999 7
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
|++++.++++.+.++++|.+.+++..+.. +...+ ....+ ++|+|+|++|....+..++++|+++ |+++.++....
T Consensus 192 V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 267 (338)
T cd08254 192 VIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD 267 (338)
T ss_pred EEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 99999999999999999998888766544 55555 44455 8999999998778899999999998 99999986543
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEee
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIRM 327 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~~ 327 (329)
...... ...+.++.++.++.... .+.+..+++++.++.+.+. .+.+++++++++++.+.+++.. |+|+++
T Consensus 268 ~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 268 KLTVDL-SDLIARELRIIGSFGGT---PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CCccCH-HHHhhCccEEEEeccCC---HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 322222 22345666777654322 2568889999999977643 4789999999999999988764 887753
No 64
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.5e-33 Score=258.75 Aligned_cols=295 Identities=24% Similarity=0.322 Sum_probs=227.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|..|+.++.+.|.+.... ..|..+ |.+.
T Consensus 52 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~~~~----------~~~~- 119 (375)
T cd08282 52 EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAGGAY----------GYVD- 119 (375)
T ss_pred CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-cccccc----------cccc-
Confidence 4689999999999999999999999999999999999999999999999999752110 000000 0000
Q ss_pred eccccccccccEEeeec--cEEEcCCCCCcc---chhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLD---KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV 166 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~ 166 (329)
....+|+|+||+.+|.+ .++++|++++++ ++++++.+++|||+++ ..+++++|++|+|.|+|.+|++++|+|+.
T Consensus 120 ~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~ 198 (375)
T cd08282 120 MGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAIL 198 (375)
T ss_pred cCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 00124799999999976 899999999998 5677888999999987 77889999999998889999999999999
Q ss_pred cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH-----------HHHHHHHhh
Q 047713 167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ-----------AMISAFECV 235 (329)
Q Consensus 167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~-----------~~~~~~~~l 235 (329)
.|+.+++++++++++.++++++|+. .+++.+.+ +...+.+++++++|++||++|... .+..+++++
T Consensus 199 ~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l 275 (375)
T cd08282 199 RGASRVYVVDHVPERLDLAESIGAI-PIDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVT 275 (375)
T ss_pred cCCCEEEEECCCHHHHHHHHHcCCe-EeccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHh
Confidence 9976788898999999999999984 45555433 777777776668999999998642 478899999
Q ss_pred ccCCeEEEEeccCCCCCc-----------cccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeee
Q 047713 236 HDGWGVAVLVGVPNKDDA-----------FKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV 303 (329)
Q Consensus 236 ~~~~G~vv~~g~~~~~~~-----------~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~ 303 (329)
+++ |+++.++....... ..+. ..++.++..+.+.... ..+.+..+++++.++.+.+..++.+.|
T Consensus 276 ~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~ 351 (375)
T cd08282 276 RPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVI 351 (375)
T ss_pred hcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEe
Confidence 998 99988875322110 0011 1122344445443321 225678889999999887655578999
Q ss_pred ecccHHHHHHHHHcCcceEEEEe
Q 047713 304 PFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 304 ~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
+++++++|++.+.+++..|+|++
T Consensus 352 ~l~~~~~a~~~~~~~~~~kvvv~ 374 (375)
T cd08282 352 SLEDAPEAYARFDKRLETKVVIK 374 (375)
T ss_pred eHHHHHHHHHHHhcCCceEEEeC
Confidence 99999999999988874488875
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.6e-33 Score=252.82 Aligned_cols=285 Identities=22% Similarity=0.381 Sum_probs=227.5
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEe-ecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
.++|.++|||++|+|+++|++++.|++||+|+ .....+|+.|++|..++.+.|+.....+ + |++
T Consensus 51 ~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~ 115 (337)
T cd05283 51 TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-N--------------GKY 115 (337)
T ss_pred CCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcc-c--------------ccc
Confidence 35689999999999999999999999999998 4445589999999999999998754321 0 110
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA 169 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~ 169 (329)
..+....|+|+||+.++.+.++++|+++++++++.+++.+.+||+++. ...+++|++|+|.|+|.+|++++++|+.+|+
T Consensus 116 ~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~ 194 (337)
T cd05283 116 PDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA 194 (337)
T ss_pred cCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 011223579999999999999999999999999999999999999864 4568999999998889999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+++.+++++++.+.++++|++.+++..+.+ +. +. ..+++|+|||++|....+..++++++++ |+++.+|...
T Consensus 195 -~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~---~~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 266 (337)
T cd05283 195 -EVTAFSRSPSKKEDALKLGADEFIATKDPE--AM---KK-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPE 266 (337)
T ss_pred -eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hh---hh-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccC
Confidence 899998999999999999998888765432 22 11 2348999999998765688999999998 9999998754
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
.....+. ..++.++.++.+...... ++++++++++.++++.+ . .+.|+++++++||+.+.+++.. |+|++
T Consensus 267 ~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 267 EPLPVPP-FPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred CCCccCH-HHHhcCceEEEEecccCH---HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 3322221 223467888888776533 57888999999987643 3 3789999999999999988864 87763
No 66
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5e-33 Score=251.97 Aligned_cols=282 Identities=27% Similarity=0.433 Sum_probs=226.6
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.|.++|||++|+|+++|++++.|++||+|++.+. .+|+.|.+|..+..+.|.+... .|+
T Consensus 53 ~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------- 112 (338)
T PRK09422 53 TGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGY----------------- 112 (338)
T ss_pred CCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCc-----------------
Confidence 4789999999999999999999999999997654 4799999999999999986432 111
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV-SGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~-~G~~ 170 (329)
..+|+|+||+.++.++++++|++++++++++++.++.|||+++ ..+++++|++|||+|+|++|++++++|+. .|+
T Consensus 113 --~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~- 188 (338)
T PRK09422 113 --TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA- 188 (338)
T ss_pred --cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-
Confidence 1247999999999999999999999999999999999999986 77889999999999999999999999998 598
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+++++++++++.+.++++|++.+++....+ ++.+.+++.++ ++|+++++.++...+..++++++.+ |+++.+|....
T Consensus 189 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~ 265 (338)
T PRK09422 189 KVIAVDINDDKLALAKEVGADLTINSKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE 265 (338)
T ss_pred eEEEEeCChHHHHHHHHcCCcEEecccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC
Confidence 899999999999999999998888764311 26677777665 6886665556778899999999998 99999986433
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEeeC
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIRMD 328 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~~~ 328 (329)
..... ......+..++.++..... +.++++++++.++.+.. .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus 266 ~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 266 SMDLS-IPRLVLDGIEVVGSLVGTR---QDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred Cceec-HHHHhhcCcEEEEecCCCH---HHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 22111 1223346677766543222 56888999999987643 34 468999999999999988765 8887653
No 67
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.3e-33 Score=250.97 Aligned_cols=258 Identities=14% Similarity=0.173 Sum_probs=207.2
Q ss_pred CCCCcccCCcceEEEEEecCCCCc-CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTD-LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
+.+|.++|||++|+|+++|+++++ |++||+|++.+..
T Consensus 58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~------------------------------------------ 95 (324)
T cd08291 58 KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS------------------------------------------ 95 (324)
T ss_pred CCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCC------------------------------------------
Confidence 357899999999999999999996 9999999864210
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE-c-CCHHHHHHHHHHHHc
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF-G-LGAVGLAAAEGARVS 167 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-G-ag~iG~aai~la~~~ 167 (329)
+|+|+||+.+|++.++++|+++++++++++++++.|||.. ....+. ++++++|+ | +|++|++++|+|+.+
T Consensus 96 ------~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~ 167 (324)
T cd08291 96 ------YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKAD 167 (324)
T ss_pred ------CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence 2699999999999999999999999999888889999754 455555 56667665 4 599999999999999
Q ss_pred CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+ +|+++++++++.++++++|+++++++.+.+ +.+.+++++.+ ++|+|||++|.. .....+++++++ |+++.+|
T Consensus 168 G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g 242 (324)
T cd08291 168 GI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYG 242 (324)
T ss_pred CC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEE
Confidence 99 789998999999999999999999877655 88888888877 899999999874 567789999998 9999998
Q ss_pred cCCCCCcccc-ccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713 247 VPNKDDAFKT-HPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I 321 (329)
Q Consensus 247 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~ 321 (329)
.......... ....+.+++++.++....+.. .+.++++++++. +. ++++++++|+|+|+++|++.+.+++. +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~G 319 (324)
T cd08291 243 YLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMSTG 319 (324)
T ss_pred ecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCCC
Confidence 6543321112 223456888998887655432 135667788877 54 45678899999999999999988765 5
Q ss_pred EEEEe
Q 047713 322 RCIIR 326 (329)
Q Consensus 322 kvvv~ 326 (329)
|++|.
T Consensus 320 kvv~~ 324 (324)
T cd08291 320 KKLLI 324 (324)
T ss_pred eEEeC
Confidence 88763
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1e-32 Score=250.29 Aligned_cols=282 Identities=28% Similarity=0.467 Sum_probs=232.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecC-CCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVF-TGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
++|.++|+|++|+|+++|++++.+++||+|+..+ ..+|+.|.+|..++.+.|.+.... |
T Consensus 55 ~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------- 114 (341)
T cd08297 55 KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---G----------------- 114 (341)
T ss_pred CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccc---c-----------------
Confidence 4577899999999999999999999999999865 468999999999999999875321 1
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
....|++++|+.++++.++++|++++++++++++..+.|||.++.. .+++++++|||+|+ +.+|++++++|+.+|+
T Consensus 115 --~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~ 191 (341)
T cd08297 115 --YTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL 191 (341)
T ss_pred --cccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence 1224799999999999999999999999999999999999998655 58999999999987 7799999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|++++.++++.+.++++|++.+++..+.+ +.+.+.+++++ ++|++||+.++...+..++++++++ |+++.++..
T Consensus 192 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~ 267 (341)
T cd08297 192 -RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLP 267 (341)
T ss_pred -eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCC
Confidence 899998999999999999999888876654 77888888766 8999999888778899999999998 999999864
Q ss_pred CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
.... .... .....++.++.+...... +.++.+++++.++.+.+ .+ ..|++++++++++.+..++.. |++++
T Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 340 (341)
T cd08297 268 PGGF-IPLDPFDLVLRGITIVGSLVGTR---QDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVD 340 (341)
T ss_pred CCCC-CCCCHHHHHhcccEEEEeccCCH---HHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEe
Confidence 4221 1222 122356777776543322 56888999999987743 33 679999999999999987764 88876
Q ss_pred e
Q 047713 327 M 327 (329)
Q Consensus 327 ~ 327 (329)
+
T Consensus 341 ~ 341 (341)
T cd08297 341 F 341 (341)
T ss_pred C
Confidence 4
No 69
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.8e-33 Score=251.35 Aligned_cols=267 Identities=24% Similarity=0.326 Sum_probs=213.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+.|+++.|++...+ |
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~------------------ 111 (325)
T cd08264 53 PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---G------------------ 111 (325)
T ss_pred CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCcccee---e------------------
Confidence 3578999999999999999999999999999999999999999999999999874321 1
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
....|+|++|+.++++.++++|+++++++++.+++++.+||+++.. .++++|++|+|+|+ |++|++++++|+.+|+
T Consensus 112 -~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~- 188 (325)
T cd08264 112 -VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA- 188 (325)
T ss_pred -ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 1124799999999999999999999999999999999999998654 88999999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++ +.+.++++|++.+++..+ ..+.+++++ +++|+|+|++|. ..+..++++++++ |+++.++....
T Consensus 189 ~v~~~~----~~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~ 257 (325)
T cd08264 189 EVIAVS----RKDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG 257 (325)
T ss_pred eEEEEe----HHHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC
Confidence 677765 236678899988876543 345566665 679999999986 6889999999998 99999986422
Q ss_pred CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713 251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI 321 (329)
Q Consensus 251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~ 321 (329)
.. .... ...+.++.++.+...+.. +.++++++++...+ ..+.+.|+++++++|++.+.+++..
T Consensus 258 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 258 GE-VKLDLSDLYSKQISIIGSTGGTR---KELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred CC-CccCHHHHhhcCcEEEEccCCCH---HHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCc
Confidence 11 1111 122345666666544332 56888888885332 2356889999999999999877654
No 70
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=7.8e-33 Score=251.40 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=200.0
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|+++|||++|+|+++|++|+.|++||+|+..
T Consensus 66 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------- 99 (345)
T cd08293 66 APWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF---------------------------------------------- 99 (345)
T ss_pred CCccCCCceEeeEEEEEeccCCCCCCCCCEEEec----------------------------------------------
Confidence 3568899999999999999999999999999843
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccc----hhcccccccchhhhhhhccCCCCC--CeEEEEcC-CHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDK----VCVLSCGISTGFGATVNVAKPKKG--QSVAIFGL-GAVGLAAAEG 163 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~iG~aai~l 163 (329)
.++|+||+++|++.++++|+.+++++ +++++.++.|||+++.+..++++| ++|||+|+ |++|++++|+
T Consensus 100 -----~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiql 174 (345)
T cd08293 100 -----NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQI 174 (345)
T ss_pred -----CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHH
Confidence 13799999999999999999865443 456788899999998777888877 99999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713 164 ARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242 (329)
Q Consensus 164 a~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v 242 (329)
|+.+|+.+|+++++++++.+++++ +|++.++++.+.+ +.+.+++++++++|+|||++|+. .+..++++++++ |++
T Consensus 175 Ak~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~i 250 (345)
T cd08293 175 GRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHI 250 (345)
T ss_pred HHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEE
Confidence 999998568999899999998876 9999999877655 88888887766899999999874 578999999998 999
Q ss_pred EEeccCCCC---Ccc--cccc--cccc--ccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713 243 VLVGVPNKD---DAF--KTHP--MNLL--NERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311 (329)
Q Consensus 243 v~~g~~~~~---~~~--~~~~--~~~~--~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a 311 (329)
+.+|..... ... .... ..+. ++.++.......+.. .+.++++++++.++.+.+. ....++++++++|
T Consensus 251 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A 328 (345)
T cd08293 251 ILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEA 328 (345)
T ss_pred EEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHH
Confidence 999853211 000 0100 0111 233332222111110 1235677888999987644 3456799999999
Q ss_pred HHHHHcCcc-eEEEEee
Q 047713 312 FDLMLAGES-IRCIIRM 327 (329)
Q Consensus 312 ~~~~~~~~~-~kvvv~~ 327 (329)
++.+.+++. .|+|+++
T Consensus 329 ~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 329 FQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHhcCCCCCeEEEEC
Confidence 999988875 4888864
No 71
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6e-33 Score=251.00 Aligned_cols=277 Identities=22% Similarity=0.385 Sum_probs=225.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|+|++|+|+++|++++.+++||+|++.+..+|+.|.+|..|+++.|.....+
T Consensus 53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 110 (334)
T PRK13771 53 KYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGY---------------------- 110 (334)
T ss_pred CCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccc----------------------
Confidence 5678999999999999999999999999999988889999999999999999875431
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
+....|+|++|+.++.+.++++|+++++.+++.+++++.++|+++... .++++++|+|+|+ |.+|++++++|+.+|+
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~- 188 (334)
T PRK13771 111 GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA- 188 (334)
T ss_pred ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-
Confidence 111247999999999999999999999999999999999999987554 8899999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+++++++++++.+.++++ ++.+++.. + +...++++ +++|++||++|. ..+..++++++++ |+++.+|....
T Consensus 189 ~vi~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~ 259 (334)
T PRK13771 189 KVIAVTSSESKAKIVSKY-ADYVIVGS--K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDP 259 (334)
T ss_pred EEEEEeCCHHHHHHHHHH-HHHhcCch--h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCC
Confidence 788888889999998888 66666543 2 55556654 369999999986 5678999999998 99999987543
Q ss_pred CCc--cccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713 251 DDA--FKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 251 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
... ..... .+.++.++.+... ..+++++.+++++.++.+. +.+.+.|+++++++|++.+.++.. .|+++..
T Consensus 260 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 260 SPTYSLRLGY-IILKDIEIIGHIS---ATKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CCCcccCHHH-HHhcccEEEEecC---CCHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 222 11112 2456777777532 2235688899999998764 346789999999999999987765 4888764
No 72
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.5e-32 Score=247.91 Aligned_cols=286 Identities=27% Similarity=0.467 Sum_probs=229.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+..+|++|++|..+.+..|+.-.. .
T Consensus 51 ~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 108 (343)
T cd08236 51 HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY----------------------I 108 (343)
T ss_pred CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce----------------------E
Confidence 457899999999999999999999999999999999999999999999999876211 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|+.+|++.++++|+++++++++.+ .++++||+++. ...++++++|+|+|+|.+|++++|+|+.+|+++
T Consensus 109 ~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~ 186 (343)
T cd08236 109 GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKR 186 (343)
T ss_pred ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 1113579999999999999999999999998877 67889999864 778999999999988999999999999999954
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+++++.++++.+.++++|++.+++..+.. ...++...++ ++|++||++|....+..++++|+++ |+++.++....
T Consensus 187 v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 262 (343)
T cd08236 187 VIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYG 262 (343)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCC
Confidence 88888888999999999998888765432 4556666666 8999999998777889999999998 99999986543
Q ss_pred CCccccc--cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc-Ccce-EEE
Q 047713 251 DDAFKTH--PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA-GESI-RCI 324 (329)
Q Consensus 251 ~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~-~~~~-kvv 324 (329)
....... ...+.++.++.+....... ..+.++++++++.++.+.+.+.+.+.+++++++++++.+.+ +... |+|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v 342 (343)
T cd08236 263 DVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVL 342 (343)
T ss_pred CcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEe
Confidence 2111111 1123567777776653221 13567888999999887544456789999999999999988 4444 665
Q ss_pred E
Q 047713 325 I 325 (329)
Q Consensus 325 v 325 (329)
+
T Consensus 343 ~ 343 (343)
T cd08236 343 L 343 (343)
T ss_pred C
Confidence 3
No 73
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.9e-32 Score=245.05 Aligned_cols=269 Identities=23% Similarity=0.352 Sum_probs=216.2
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH 92 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 92 (329)
+|.++|+|++|+|+++|++ +++||+|...+..+|+.|.+|..|.++.|...... ++
T Consensus 50 ~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------ 105 (319)
T cd08242 50 FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVL---GI------------------ 105 (319)
T ss_pred CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCccc---Cc------------------
Confidence 5789999999999999998 67999999999999999999999999988874431 00
Q ss_pred ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEE
Q 047713 93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRI 172 (329)
Q Consensus 93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~v 172 (329)
....|+|++|+.++.++++++|++++.++++.+ ..++++|.. ....++++|++|||+|+|.+|++++|+|+.+|+ ++
T Consensus 106 ~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~v 182 (319)
T cd08242 106 VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DV 182 (319)
T ss_pred cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eE
Confidence 012479999999999999999999999887753 445566654 577889999999999889999999999999999 68
Q ss_pred EEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCC
Q 047713 173 IGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252 (329)
Q Consensus 173 v~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~ 252 (329)
++++.++++.++++++|++.+++..+. ..++++|++||++|....+..++++++++ |+++..+......
T Consensus 183 i~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~ 251 (319)
T cd08242 183 VLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPA 251 (319)
T ss_pred EEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCC
Confidence 889889999999999999887765321 12238999999998877889999999998 9999876533322
Q ss_pred ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326 (329)
Q Consensus 253 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~ 326 (329)
.... .....++.++.+... ..++++++++.++.+++.+.+.+.|+++++++|++.+.++...|++++
T Consensus 252 ~~~~-~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 252 SFDL-TKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred ccCH-HHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 2221 123456777776543 237889999999988666667899999999999999987766788875
No 74
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3e-32 Score=246.66 Aligned_cols=282 Identities=22% Similarity=0.384 Sum_probs=229.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|.+|..+.++.|+..... |
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g------------------ 114 (342)
T cd08266 56 PLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---G------------------ 114 (342)
T ss_pred CCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccccc---c------------------
Confidence 4588999999999999999999999999999999999999999999999999863210 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
....|++++|+.++.+.++++|+.+++++++.+++++.++++++....++.++++++|+|+ +.+|++++++++..|+
T Consensus 115 -~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~- 192 (342)
T cd08266 115 -EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA- 192 (342)
T ss_pred -cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 1124789999999999999999999999999999999999998878888999999999987 7999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+++.++.++++.+.+++++.+.+++..+.+ +...+.+.+.+ ++|++++++|. ..+...+++++++ |+++.++...
T Consensus 193 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~ 268 (342)
T cd08266 193 TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATT 268 (342)
T ss_pred EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCC
Confidence 788888888888888888887777654433 66666766665 89999999976 5788899999998 9999998654
Q ss_pred CCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 250 KDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
... ..... ..+.++.++.+...... ..+.++++++.++.+. +.+.+.|+++++++|++.+.++... |++++
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 269 GYE-APIDLRHVFWRQLSILGSTMGTK---AELDEALRLVFRGKLK--PVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred CCC-CCcCHHHHhhcceEEEEEecCCH---HHHHHHHHHHHcCCcc--cceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 321 11121 23456777776654332 4677888999888654 3467899999999999999877654 88775
No 75
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.3e-32 Score=245.30 Aligned_cols=253 Identities=17% Similarity=0.263 Sum_probs=203.2
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
..|.++|.|++|+|+++|+ .|++||||+..
T Consensus 56 ~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----------------------------------------------- 85 (325)
T TIGR02825 56 EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----------------------------------------------- 85 (325)
T ss_pred CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----------------------------------------------
Confidence 3578999999999999874 59999999853
Q ss_pred eccccccccccEEeeeccEEEc----CCCCCccch-hcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKI----NPAAPLDKV-CVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~ 165 (329)
++|++|+.++.+.+.++ |++++++++ +++++++.|||+++....++++|++|||+|+ |++|++++|+|+
T Consensus 86 -----~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk 160 (325)
T TIGR02825 86 -----PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK 160 (325)
T ss_pred -----cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence 36899999999988887 899999987 6899999999999888899999999999985 999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713 166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
..|+ +|+++++++++.++++++|++.++++.+.+ .+.+.++...++++|+|||++|+ ..+..++++++++ |+++.+
T Consensus 161 ~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~ 236 (325)
T TIGR02825 161 LKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAIC 236 (325)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEe
Confidence 9999 789888999999999999999999876532 25566666655589999999986 5679999999998 999999
Q ss_pred ccCCCCC---ccc---cccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHH
Q 047713 246 GVPNKDD---AFK---THPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLML 316 (329)
Q Consensus 246 g~~~~~~---~~~---~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~ 316 (329)
|...... ..+ .....+.+++++.++....+.. .+.++++++++.++++.+. +...|+++++++|++.++
T Consensus 237 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~ 314 (325)
T TIGR02825 237 GAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGML 314 (325)
T ss_pred cchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHh
Confidence 8643211 111 1122345677777765433221 1357789999999987654 446789999999999999
Q ss_pred cCcce-EEEE
Q 047713 317 AGESI-RCII 325 (329)
Q Consensus 317 ~~~~~-kvvv 325 (329)
+++.. |+|+
T Consensus 315 ~~~~~gkvVv 324 (325)
T TIGR02825 315 KGENLGKTIV 324 (325)
T ss_pred cCCCCCeEEe
Confidence 88764 7776
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.4e-31 Score=241.95 Aligned_cols=281 Identities=27% Similarity=0.442 Sum_probs=225.5
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.+++||+|++.+...|+.|.+|..++.+.|......
T Consensus 51 ~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 108 (334)
T cd08234 51 APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAV---------------------- 108 (334)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCccee----------------------
Confidence 4788999999999999999999999999999999999999999999999988764210
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|+.++++.++++|+++++.+++.+ .++.++++++ ..+++++|++|||+|+|.+|++++++|+..|+++
T Consensus 109 ~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~ 186 (334)
T cd08234 109 GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASR 186 (334)
T ss_pred ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 0112479999999999999999999999988765 7788898886 7789999999999988999999999999999955
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
++++++++++.+.++++|++.+++..+.+ +... +...++++|++||++|....+..++++++++ |+++.++.....
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 262 (334)
T cd08234 187 VTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPD 262 (334)
T ss_pred EEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCC
Confidence 88888899999999999998887765544 4433 3333338999999998777889999999998 999999865432
Q ss_pred Cccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEE
Q 047713 252 DAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCII 325 (329)
Q Consensus 252 ~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv 325 (329)
........ .+.++.++.+.... .+.++++++++.++.+.+.+.+.+++++++++++++.+.+ +. .|+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 263 ARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 22222221 12356677665432 2468889999999987665556788999999999999988 54 47765
No 77
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=8.3e-32 Score=243.13 Aligned_cols=277 Identities=27% Similarity=0.478 Sum_probs=222.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|.+|..++++.|.+. . +.|
T Consensus 53 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~------------------ 111 (332)
T cd08259 53 KYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNR-A--EYG------------------ 111 (332)
T ss_pred CCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCc-c--ccc------------------
Confidence 4578999999999999999999999999999998899999999999999999864 1 111
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. ..+++++++||+|+ |.+|++++++++..|.
T Consensus 112 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~- 188 (332)
T cd08259 112 -EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA- 188 (332)
T ss_pred -cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-
Confidence 1225799999999999999999999999999999999999998766 88999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
.++++++++++.+.+++++.+.+++..+ +.+.+.+.. ++|++++++|. .....++++++++ |+++.++....
T Consensus 189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~ 260 (332)
T cd08259 189 RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTP 260 (332)
T ss_pred eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCC
Confidence 7888888888888888898877765432 444454443 69999999976 4578889999998 99999986443
Q ss_pred CCcc-ccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 251 DDAF-KTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 251 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
.... ... ....++.++.+... .....++++++++.++.+. +.+.+.|+++++++|++.+.+++.. |++++
T Consensus 261 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 261 DPAPLRPG-LLILKEIRIIGSIS---ATKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CCcCCCHH-HHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 2211 111 11245666665532 1225678889999888764 3467899999999999999987764 77763
No 78
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.2e-31 Score=241.49 Aligned_cols=257 Identities=19% Similarity=0.274 Sum_probs=210.3
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++|+.|++||+|++.+.
T Consensus 56 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-------------------------------------------- 91 (324)
T cd08292 56 PELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV-------------------------------------------- 91 (324)
T ss_pred CCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--------------------------------------------
Confidence 456899999999999999999999999999986521
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
.|+|++|+.+++..++++|+++++++++.+++++.++|+++ ...++++|++|||+|+ |.+|++++++|+.+|+
T Consensus 92 -----~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~ 165 (324)
T cd08292 92 -----HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI 165 (324)
T ss_pred -----CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 26999999999999999999999999999999899999875 5688999999999976 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+++++..++++.+.++++|++.+++..+.+ +.+.+++++.+ ++|+|||++|. .....++++++++ |+++.+|..
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~ 240 (324)
T cd08292 166 -NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSM 240 (324)
T ss_pred -eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecC
Confidence 778887888888888889998888776544 78888888887 99999999987 5778899999998 999999864
Q ss_pred CCCCccccc-cccccccceEEEeeecCCCC-------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKP-------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~-------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
... ..... ...+.++.++.+.....+.. .+.+..+++++.++.+.+. +.+.|+++++++|++.+.+++.
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~ 317 (324)
T cd08292 241 SGE-PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGR 317 (324)
T ss_pred CCC-CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCC
Confidence 322 11222 11345788888876543221 1357778899999977643 3678999999999999887665
Q ss_pred e-EEEE
Q 047713 321 I-RCII 325 (329)
Q Consensus 321 ~-kvvv 325 (329)
. |+++
T Consensus 318 ~~kvvv 323 (324)
T cd08292 318 AGKVLL 323 (324)
T ss_pred CceEEe
Confidence 4 7775
No 79
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.6e-32 Score=244.66 Aligned_cols=272 Identities=23% Similarity=0.274 Sum_probs=214.0
Q ss_pred CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
..++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|.. |...
T Consensus 74 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~~----------------------- 125 (350)
T cd08274 74 TLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDYI----------------------- 125 (350)
T ss_pred CCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cccc-----------------------
Confidence 346789999999999999999999999999999988888888776421 2110
Q ss_pred eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713 90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG 168 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G 168 (329)
+...+|+|++|+.++...++++|+++++.+++++++++.+||+++ ...++++|++|||+|+ |.+|++++++|+.+|
T Consensus 126 --~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g 202 (350)
T cd08274 126 --GSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRG 202 (350)
T ss_pred --CCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 001137999999999999999999999999999999999999986 7788999999999987 999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+ ++++++.++ +.+.++++|++.+++..+.. +.. ...+.+ ++|+|||++|. ..++.++++++++ |+++.+|.
T Consensus 203 ~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~ 274 (350)
T cd08274 203 A-IVIAVAGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGA 274 (350)
T ss_pred C-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecc
Confidence 9 677776655 78888999987665543332 333 444455 89999999986 5789999999998 99999986
Q ss_pred CCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 248 PNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
..... .... ..++.++.++.++..... +.+.++++++.++.+. +++.+.|+++++++|++.+..++.. |+|+
T Consensus 275 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi 348 (350)
T cd08274 275 IAGPV-VELDLRTLYLKDLTLFGSTLGTR---EVFRRLVRYIEEGEIR--PVVAKTFPLSEIREAQAEFLEKRHVGKLVL 348 (350)
T ss_pred cCCcc-ccCCHHHhhhcceEEEEeecCCH---HHHHHHHHHHHCCCcc--cccccccCHHHHHHHHHHHhcCCCceEEEE
Confidence 43221 1222 222567778887765322 5688899999998764 3467889999999999999877654 7776
Q ss_pred e
Q 047713 326 R 326 (329)
Q Consensus 326 ~ 326 (329)
+
T Consensus 349 ~ 349 (350)
T cd08274 349 V 349 (350)
T ss_pred e
Confidence 5
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.2e-31 Score=242.11 Aligned_cols=270 Identities=26% Similarity=0.344 Sum_probs=217.9
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|||++|+|+++|+++.++++||+|++.+. .+|+.|.+|..++.++|...... |+
T Consensus 57 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------- 117 (329)
T cd08298 57 KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GY---------------- 117 (329)
T ss_pred CCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---cc----------------
Confidence 56889999999999999999999999999987655 58999999999999999865421 11
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
..+|+|++|+.++.+.++++|+++++.+++++++++.+||+++ +.++++++++|+|+|+|.+|++++++|+..|.
T Consensus 118 ---~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~- 192 (329)
T cd08298 118 ---TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA- 192 (329)
T ss_pred ---ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence 1247899999999999999999999999999999999999987 88999999999999999999999999999998
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++.++++.+.++++|++..++..+. ..+++|+++++.+....++.++++++++ |+++.++....
T Consensus 193 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~ 260 (329)
T cd08298 193 EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS 260 (329)
T ss_pred eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC
Confidence 88888889999999999999877765432 1237999999877778899999999998 99998874321
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI 324 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv 324 (329)
. ........+.++..+.+..... .+.++++++++.++.+.+ ..+.|+++++++|++.+++++.. |+|
T Consensus 261 ~-~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v 328 (329)
T cd08298 261 D-IPAFDYELLWGEKTIRSVANLT---RQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAV 328 (329)
T ss_pred C-CCccchhhhhCceEEEEecCCC---HHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceee
Confidence 1 1111111233455555544221 245778889998887654 35889999999999999987765 655
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.2e-31 Score=240.46 Aligned_cols=277 Identities=26% Similarity=0.430 Sum_probs=221.4
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+. .+|++|++|..++++.|.+.... +
T Consensus 52 ~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------- 111 (330)
T cd08245 52 KYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT---G----------------- 111 (330)
T ss_pred CCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCcccc---C-----------------
Confidence 56889999999999999999999999999987554 67999999999999999984321 1
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
....|+|++|+.+++++++++|+++++++++.+++.+.+||.++.. .+++++++|||+|+|.+|++++++|+.+|.
T Consensus 112 --~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~- 187 (330)
T cd08245 112 --YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF- 187 (330)
T ss_pred --cccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-
Confidence 1124799999999999999999999999999999999999998644 789999999999888899999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|+++++++++.+.++++|++.+++..... .... ..+++|++||+++.......++++++++ |+++.++....
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~ 260 (330)
T cd08245 188 ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES 260 (330)
T ss_pred EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC
Confidence 789988999999999999988887654432 2222 2247999999988778889999999998 99999986432
Q ss_pred CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
.........++.++.++.+...+.. ..++.+++++.++.+.+ ..+.|++++++++++.+.+++.. |+|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 261 PPFSPDIFPLIMKRQSIAGSTHGGR---ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CccccchHHHHhCCCEEEEeccCCH---HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 2111111223456677776654332 46778889998887753 34789999999999999887765 6553
No 82
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.3e-31 Score=242.64 Aligned_cols=258 Identities=19% Similarity=0.266 Sum_probs=205.0
Q ss_pred CCCcccCCcc--eEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713 12 LFPRIFGHEA--GGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP 89 (329)
Q Consensus 12 ~~P~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 89 (329)
.+|+++|+++ .|++..+|++++.|++||+|+..
T Consensus 66 ~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~--------------------------------------------- 100 (338)
T cd08295 66 LPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF--------------------------------------------- 100 (338)
T ss_pred CCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence 4688999854 45666688999999999999843
Q ss_pred eeeccccccccccEEeee-ccEEEcC-CCCCcc-chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713 90 IYHFVGTSTFSEYTVTHV-GCVAKIN-PAAPLD-KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 90 ~~~~~~~g~~a~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~ 165 (329)
|+|+||+++|+ ..++++| +.+++. +++++++++.|||+++....++++|++|||+|+ |++|++++|+|+
T Consensus 101 -------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk 173 (338)
T cd08295 101 -------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK 173 (338)
T ss_pred -------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 58999999999 7999995 678876 789999999999999878889999999999987 999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 166 VSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+|+ +|+++++++++.+++++ +|++.++++.+.+ ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.
T Consensus 174 ~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~ 249 (338)
T cd08295 174 LKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAA 249 (338)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEE
Confidence 9999 78888889999999988 9999998865431 27777777765689999999986 6889999999998 99999
Q ss_pred eccCCCCCcc-----ccccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc
Q 047713 245 VGVPNKDDAF-----KTHPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA 317 (329)
Q Consensus 245 ~g~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~ 317 (329)
+|........ ......+.+++++.++....+.. .+.++++++++.++.+++. +...|+++++++|++.+++
T Consensus 250 ~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~ 327 (338)
T cd08295 250 CGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFT 327 (338)
T ss_pred ecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhc
Confidence 9864332110 01122345677777765443321 1236778899999977653 4466999999999999988
Q ss_pred Ccc-eEEEEee
Q 047713 318 GES-IRCIIRM 327 (329)
Q Consensus 318 ~~~-~kvvv~~ 327 (329)
++. +|+|+++
T Consensus 328 ~~~~GkvVl~~ 338 (338)
T cd08295 328 GSNIGKQVVKV 338 (338)
T ss_pred CCCCceEEEEC
Confidence 876 4888864
No 83
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.9e-31 Score=220.25 Aligned_cols=271 Identities=22% Similarity=0.319 Sum_probs=211.0
Q ss_pred CcCCCCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713 4 DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF 83 (329)
Q Consensus 4 ~~~~~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 83 (329)
.+.+...|++|.+-|+|++|+|+.+|++++.|++||+|+.....
T Consensus 68 QGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~------------------------------------ 111 (354)
T KOG0025|consen 68 QGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSAN------------------------------------ 111 (354)
T ss_pred ccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCC------------------------------------
Confidence 34455667899999999999999999999999999999965322
Q ss_pred ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHH
Q 047713 84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAE 162 (329)
Q Consensus 84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~ 162 (329)
.|+|++|.+.+++.++++++.++++.||++...-.|||+.|....++.+||+|+-.|+ +.+|++.+|
T Consensus 112 ------------lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQ 179 (354)
T KOG0025|consen 112 ------------LGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQ 179 (354)
T ss_pred ------------CccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHH
Confidence 4899999999999999999999999999999999999999888899999999999988 999999999
Q ss_pred HHHHcCCCEEEEEcCCh---hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccC
Q 047713 163 GARVSGASRIIGVDLNP---SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDG 238 (329)
Q Consensus 163 la~~~G~~~vv~~~~~~---~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~ 238 (329)
+|+++|++.+=++...+ +-.+.++.+|+++++..++.. -.+..+..... .+.+.|||+|+.+. ....+.|..+
T Consensus 180 laka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~--~~~~~k~~~~~~~prLalNcVGGksa-~~iar~L~~G 256 (354)
T KOG0025|consen 180 LAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR--DRKMKKFKGDNPRPRLALNCVGGKSA-TEIARYLERG 256 (354)
T ss_pred HHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc--chhhhhhhccCCCceEEEeccCchhH-HHHHHHHhcC
Confidence 99999996554443322 233456779999999755432 11122222223 79999999998654 4556789998
Q ss_pred CeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCC--------CHHHHHHHHHcCCCCCCcceeeeeecccHHH
Q 047713 239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRS--------DLPSVVEKYMNKELEVEKFITHTVPFSEINK 310 (329)
Q Consensus 239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~ 310 (329)
|..+.+|.....+.......+++|.+++.|+++..|...+ .+.++.+++..|++... ..+..+|++.+.
T Consensus 257 -gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~t 333 (354)
T KOG0025|consen 257 -GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKT 333 (354)
T ss_pred -ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhH
Confidence 9999998766554433445567899999999998886432 35678888899987543 347889999999
Q ss_pred HHHHHHcCc--ceEEEEeeC
Q 047713 311 AFDLMLAGE--SIRCIIRMD 328 (329)
Q Consensus 311 a~~~~~~~~--~~kvvv~~~ 328 (329)
|++...+.. +.|.++.++
T Consensus 334 ald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 334 ALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHHHHHHHhccCCceEEEec
Confidence 999754433 346666653
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.6e-31 Score=241.17 Aligned_cols=254 Identities=19% Similarity=0.277 Sum_probs=203.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|++ .++.|++||||+..
T Consensus 58 ~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~----------------------------------------------- 87 (329)
T cd08294 58 EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS----------------------------------------------- 87 (329)
T ss_pred CCCcEecceEEEEEec---CCCCCCCCCEEEee-----------------------------------------------
Confidence 4689999999999985 45689999999843
Q ss_pred eccccccccccEEeeec---cEEEcCCCCC--c---cchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVG---CVAKINPAAP--L---DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAE 162 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~---~~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~ 162 (329)
++|++|+.++++ .++++|++++ + ..+++++++++|||+++....++++|++|||+|+ |++|++++|
T Consensus 88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq 162 (329)
T cd08294 88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ 162 (329)
T ss_pred -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence 378999999999 9999999988 2 2234688899999999888889999999999985 999999999
Q ss_pred HHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713 163 GARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242 (329)
Q Consensus 163 la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v 242 (329)
+|+.+|+ +|+++++++++.++++++|++.++++.+.+ +.+.+++.+++++|+|||++|+ ..+..++++++++ |++
T Consensus 163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~i 237 (329)
T cd08294 163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRV 237 (329)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEE
Confidence 9999999 799998999999999999999999887655 7788887776689999999987 6889999999998 999
Q ss_pred EEeccCCCCC--cc---c-cccccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHH
Q 047713 243 VLVGVPNKDD--AF---K-THPMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDL 314 (329)
Q Consensus 243 v~~g~~~~~~--~~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~ 314 (329)
+.+|...... .. . .....+.+++++.++....+. ..+.++++++++.++.+.+. ...+|+++++++|++.
T Consensus 238 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~ 315 (329)
T cd08294 238 AVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIG 315 (329)
T ss_pred EEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHH
Confidence 9998532211 01 1 112234577788776543321 11236678889999987654 3357999999999999
Q ss_pred HHcCcc-eEEEEee
Q 047713 315 MLAGES-IRCIIRM 327 (329)
Q Consensus 315 ~~~~~~-~kvvv~~ 327 (329)
+++++. +|+|+++
T Consensus 316 ~~~~~~~gkvvv~~ 329 (329)
T cd08294 316 MLKGENTGKAIVKV 329 (329)
T ss_pred HHcCCCCCeEEEeC
Confidence 998876 4888763
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.98 E-value=2.4e-30 Score=231.11 Aligned_cols=248 Identities=25% Similarity=0.444 Sum_probs=204.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
.+|.++|+|++|+|+++|++++.|++||+|++.+. .+|+.|++|..+.++.|+.... .
T Consensus 54 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------- 112 (306)
T cd08258 54 ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG-I-------------------- 112 (306)
T ss_pred CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce-e--------------------
Confidence 45789999999999999999999999999998775 6899999999999999976321 0
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+....|+|++|+.++++.++++|+++++++++ ++.+++++|+++....+++++++|||.|+|.+|++++++|+.+|+
T Consensus 113 -~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~- 189 (306)
T cd08258 113 -GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA- 189 (306)
T ss_pred -eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 11224799999999999999999999999876 777888999998888899999999998889999999999999999
Q ss_pred EEEEE--cCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 171 RIIGV--DLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 171 ~vv~~--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+|+++ +.++++.+.++++|++.+ +..+.+ +...+.++..+ ++|++||++|....+...+++|+++ |+++.++.
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~ 265 (306)
T cd08258 190 TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGI 265 (306)
T ss_pred EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcc
Confidence 67665 335567888899999877 665554 77778877766 8999999998777889999999998 99999988
Q ss_pred CCCC-CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcC
Q 047713 248 PNKD-DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 291 (329)
Q Consensus 248 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 291 (329)
.... ..++. ..++.+++++.|+++++. ++++++++++.+|
T Consensus 266 ~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~ 306 (306)
T cd08258 266 FGPLAASIDV-ERIIQKELSVIGSRSSTP---ASWETALRLLASG 306 (306)
T ss_pred cCCCCcccCH-HHHhhcCcEEEEEecCch---HhHHHHHHHHhcC
Confidence 5521 22222 233568999999988665 6799999988764
No 86
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.98 E-value=1.4e-30 Score=228.13 Aligned_cols=243 Identities=28% Similarity=0.459 Sum_probs=199.7
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|++|+. .|+.....
T Consensus 27 ~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~~--------------------- 81 (271)
T cd05188 27 PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGIL--------------------- 81 (271)
T ss_pred CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCEe---------------------
Confidence 35688999999999999999999999999999999999999999997 56643321
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|||+|+|.+|++++++++..|.
T Consensus 82 -~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~- 159 (271)
T cd05188 82 -GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA- 159 (271)
T ss_pred -ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 122357999999999999999999999999999999999999997777777999999999985599999999999997
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|++++.++++.+.++++|++.+++..+.+ +...+. ...+ ++|++|++++.......++++++++ |+++.++...
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~ 235 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTS 235 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCC
Confidence 899999999999999999988888766554 555555 4444 8999999998756788999999998 9999998755
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHH
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEK 287 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 287 (329)
...........+.++.++.++....+ .++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 236 GGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 44333223344678888988876544 456666654
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7.6e-30 Score=230.63 Aligned_cols=277 Identities=25% Similarity=0.365 Sum_probs=222.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|+++++|++||+|++.....|+.|.+| .|... .. .
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~-~~---------------------~ 107 (336)
T cd08276 56 KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEA-SA---------------------L 107 (336)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccc------ccccc-cc---------------------c
Confidence 46789999999999999999999999999998776666554433 33211 00 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
+....|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++|++|+|+|+|++|++++++|+..|+ +
T Consensus 108 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~ 186 (336)
T cd08276 108 GGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R 186 (336)
T ss_pred ccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence 112257899999999999999999999999999999999999998777889999999999889999999999999999 7
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
|+.++.++++.+.++++|.+.+++... .+ +...+++++++ ++|++||+++. ..+..++++++++ |+++.++...
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~ 262 (336)
T cd08276 187 VIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLS 262 (336)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCC
Confidence 888889999999999999988887655 33 77788888876 99999999974 6788999999998 9999998654
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
...........+.++.++.+...+.. +.++++++++.++.+.. ...+.+++++++++++.+.+++.. |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 263 GFEAPVLLLPLLTKGATLRGIAVGSR---AQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred CCccCcCHHHHhhcceEEEEEecCcH---HHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 43211122333567888888775432 56888888888876643 356889999999999999877664 87775
No 88
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=5.6e-30 Score=232.29 Aligned_cols=259 Identities=22% Similarity=0.318 Sum_probs=207.0
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH 92 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 92 (329)
+|.++|||++|+|+++|+++..|++||+|++.+.
T Consensus 63 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------------------------- 96 (341)
T cd08290 63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP---------------------------------------------- 96 (341)
T ss_pred CCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC----------------------------------------------
Confidence 6789999999999999999999999999996521
Q ss_pred ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713 93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR 171 (329)
Q Consensus 93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~ 171 (329)
..|+|++|+.++.+.++++|+++++++++++++++.|||+++.....+++|++|||+|+ |.+|++++++|+..|+ +
T Consensus 97 --~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~ 173 (341)
T cd08290 97 --GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K 173 (341)
T ss_pred --CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence 13799999999999999999999999999999999999999877778999999999986 9999999999999999 6
Q ss_pred EEEEcCCh----hhHHHHHhcCCceeeCCCCC---CchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 172 IIGVDLNP----SRFNEAKKFGVTEFVNPKDY---DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 172 vv~~~~~~----~~~~~~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
++++..++ ++.+.++++|++.+++.... + +...++.+.++++|+|||++|.. .+...+++++++ |+++.
T Consensus 174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~ 249 (341)
T cd08290 174 TINVVRDRPDLEELKERLKALGADHVLTEEELRSLL--ATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVT 249 (341)
T ss_pred EEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc--HHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEE
Confidence 66666554 67788889999998877653 3 66677766655899999999874 567789999998 99999
Q ss_pred eccCCCCCcccccc-ccccccceEEEeeecCCCC-------CCCHHHHHHHHHcCCCCCCcceeeee---ecccHHHHHH
Q 047713 245 VGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKP-------RSDLPSVVEKYMNKELEVEKFITHTV---PFSEINKAFD 313 (329)
Q Consensus 245 ~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~-------~~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i~~a~~ 313 (329)
++...... ..... ..+.++.++.+.....+.. ...+..+++++.++.+.+. ....+ +++++++|++
T Consensus 250 ~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~ 326 (341)
T cd08290 250 YGGMSGQP-VTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALA 326 (341)
T ss_pred EeccCCCC-cccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHH
Confidence 98543321 11222 2356788888876543321 0146778888888877543 34566 9999999999
Q ss_pred HHHcCcce-EEEEee
Q 047713 314 LMLAGESI-RCIIRM 327 (329)
Q Consensus 314 ~~~~~~~~-kvvv~~ 327 (329)
.+.+++.. |+|+.+
T Consensus 327 ~~~~~~~~~k~v~~~ 341 (341)
T cd08290 327 NALKGGGGGKQVLVM 341 (341)
T ss_pred HHhhcCCCCeEEEeC
Confidence 99887764 888764
No 89
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=8.2e-30 Score=229.30 Aligned_cols=258 Identities=20% Similarity=0.289 Sum_probs=211.9
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|+|++|+|+++|++++.+++||+|++.+.
T Consensus 54 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------------------------------------------- 89 (323)
T cd05282 54 PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-------------------------------------------- 89 (323)
T ss_pred CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--------------------------------------------
Confidence 356789999999999999999999999999996521
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
.|+|++|+.++...++++|+++++.+++.+++++.+||+++.....+.+|++|||+|+ |.+|++++++|+.+|+
T Consensus 90 -----~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~ 164 (323)
T cd05282 90 -----EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF 164 (323)
T ss_pred -----CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 2689999999999999999999999999999999999998877778899999999987 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+++++..++++.+.++++|++.+++..+.+ +...+.+++.+ ++|+|||++|+. .....+++++++ |+++.++..
T Consensus 165 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~ 239 (323)
T cd05282 165 -KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLL 239 (323)
T ss_pred -eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccC
Confidence 788888888889999999999888876544 77778888777 999999999874 567889999998 999999875
Q ss_pred CCCCcccccccccc-ccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 249 NKDDAFKTHPMNLL-NERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
... ........+. ++.++.+.....+... +.+..+++++.++.+.+ ...+.|+++++++|++.+.++..
T Consensus 240 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~ 316 (323)
T cd05282 240 SGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGR 316 (323)
T ss_pred CCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCC
Confidence 443 2222222233 7888888776554311 24667888888887653 35688999999999999988765
Q ss_pred e-EEEE
Q 047713 321 I-RCII 325 (329)
Q Consensus 321 ~-kvvv 325 (329)
. |+|+
T Consensus 317 ~~kvv~ 322 (323)
T cd05282 317 GGKVLL 322 (323)
T ss_pred CceEee
Confidence 4 7765
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=1.5e-29 Score=227.73 Aligned_cols=260 Identities=18% Similarity=0.248 Sum_probs=210.6
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++++.+++||+|++....
T Consensus 57 ~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~------------------------------------------- 93 (324)
T cd08244 57 PELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGR------------------------------------------- 93 (324)
T ss_pred CCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCC-------------------------------------------
Confidence 3567899999999999999999999999999965210
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
..|+|++|+.++.++++++|+++++++++++++++.||| ++....+++++++|+|+|+ |.+|++++++|+.+|+
T Consensus 94 ----~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~ 168 (324)
T cd08244 94 ----AGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA 168 (324)
T ss_pred ----CCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Confidence 136999999999999999999999999999999999995 4677788999999999985 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|+++++++++.+.++++|++.+++..+.+ +...+.+++++ ++|+|+|++|.. ....++++++++ |+++.++..
T Consensus 169 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~ 243 (324)
T cd08244 169 -TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWA 243 (324)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecC
Confidence 789998899999999999998888766554 77777777776 899999999875 568899999998 999999875
Q ss_pred CCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EE
Q 047713 249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RC 323 (329)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kv 323 (329)
..... ... ...+.++.++.+........ .+.+.++++++.++.+. +.+.+.|+++++++|++.+++++.. |+
T Consensus 244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 320 (324)
T cd08244 244 SGEWT-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERAAEAHAALEARSTVGKV 320 (324)
T ss_pred CCCCC-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHHHHHHHHHHcCCCCceE
Confidence 43321 222 22356777777766533221 13466678888888764 3466889999999999999887765 88
Q ss_pred EEe
Q 047713 324 IIR 326 (329)
Q Consensus 324 vv~ 326 (329)
+++
T Consensus 321 v~~ 323 (324)
T cd08244 321 LLL 323 (324)
T ss_pred EEe
Confidence 775
No 91
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=2.9e-30 Score=230.70 Aligned_cols=224 Identities=24% Similarity=0.371 Sum_probs=173.9
Q ss_pred cccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc------CCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713 96 TSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA------KPKKGQSVAIFGL-GAVGLAAAEGARVSG 168 (329)
Q Consensus 96 ~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~iG~aai~la~~~G 168 (329)
.|+|+||+++|+..++++|++++++++|++|.++.|||.+++... ++++|++|||+|+ |++|++++|+|++.+
T Consensus 103 ~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~ 182 (347)
T KOG1198|consen 103 SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAG 182 (347)
T ss_pred CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence 479999999999999999999999999999999999999999999 9999999999965 999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+ ..+++++++++.++++++|++.++|+++.+ +.+.++..+++++|+||||+|.. .+.....++... |+...++..
T Consensus 183 ~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~ 257 (347)
T KOG1198|consen 183 A-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLV 257 (347)
T ss_pred C-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEec
Confidence 6 455555899999999999999999999866 88999988844999999999874 666777777776 765555432
Q ss_pred CCCC---ccc-ccccc--------ccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHH
Q 047713 249 NKDD---AFK-THPMN--------LLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLML 316 (329)
Q Consensus 249 ~~~~---~~~-~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~ 316 (329)
.... ... ..... ..++..+.... .....+.++.+.+++.+++ +.+.+.+.||++++++|++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~ie~gk--ikp~i~~~~p~~~~~ea~~~~~ 333 (347)
T KOG1198|consen 258 GDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLY--FVPSAEYLKALVELIEKGK--IKPVIDSVYPFSQAKEAFEKLE 333 (347)
T ss_pred cccccccccccchhhhhhhhheeeeeeccceeeee--ecCCHHHHHHHHHHHHcCc--ccCCcceeeeHHHHHHHHHHHh
Confidence 2211 111 00000 00111111111 1112256788899999994 4667889999999999999998
Q ss_pred cCcc-eEEEEeeC
Q 047713 317 AGES-IRCIIRMD 328 (329)
Q Consensus 317 ~~~~-~kvvv~~~ 328 (329)
.+.. +|+++.++
T Consensus 334 ~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 334 KSHATGKVVLEKD 346 (347)
T ss_pred hcCCcceEEEEec
Confidence 7654 59998875
No 92
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.6e-29 Score=224.99 Aligned_cols=256 Identities=23% Similarity=0.334 Sum_probs=204.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 50 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 83 (312)
T cd08269 50 AEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS---------------------------------------------- 83 (312)
T ss_pred CCCcccceeeEEEEEEECCCCcCCCCCCEEEEec----------------------------------------------
Confidence 3588999999999999999999999999999642
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhccc-ccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS-CGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~-~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~ 170 (329)
.|+|++|+.++++.++++|+++ .. ++++ .+++++++++. ..++++|++|+|+|+|.+|++++++|+.+|++
T Consensus 84 ----~g~~~~~~~v~~~~~~~lP~~~--~~-~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~ 155 (312)
T cd08269 84 ----GGAFAEYDLADADHAVPLPSLL--DG-QAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGAR 155 (312)
T ss_pred ----CCcceeeEEEchhheEECCCch--hh-hHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 2689999999999999999988 22 3344 77888988754 78899999999998899999999999999994
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|+++++++++.++++++|++.+++..+.+ +...+.+++.+ ++|+++|++|....+..++++++++ |+++.++...
T Consensus 156 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~ 232 (312)
T cd08269 156 RVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ 232 (312)
T ss_pred EEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 488888889999999999998888765544 77888888776 9999999998777889999999998 9999998654
Q ss_pred CCCccccc-cccccccceEEEeeecCCC-CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEEE
Q 047713 250 KDDAFKTH-PMNLLNERTLKGTFFGNYK-PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCII 325 (329)
Q Consensus 250 ~~~~~~~~-~~~~~~~~~~~g~~~~~~~-~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvvv 325 (329)
.. ...+. .....++.++.+....... ..+.++++++++.++.+.+..++.+.|+++++++|++.+.+++. +|+++
T Consensus 233 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 233 DG-PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CC-CcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 21 11222 1234566666655432221 12568889999999987654456788999999999999998864 58776
No 93
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=1e-29 Score=213.80 Aligned_cols=258 Identities=19% Similarity=0.294 Sum_probs=210.6
Q ss_pred CCcccCCcceEEEEEec--CCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 13 FPRIFGHEAGGIVESVG--EGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+|+-+|...+|.++... |+.+.|++||.|+..
T Consensus 67 ~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---------------------------------------------- 100 (340)
T COG2130 67 PPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---------------------------------------------- 100 (340)
T ss_pred CCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------------------------------
Confidence 47778877765554432 678889999999965
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCcc--chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLD--KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS 167 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~--~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~ 167 (329)
.+|+||.+++.+.+.|++++.-.. ..-++..+..|||.+|.+..+.++|++|+|.|| |++|..+.|+||..
T Consensus 101 ------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlk 174 (340)
T COG2130 101 ------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK 174 (340)
T ss_pred ------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhh
Confidence 389999999999999998653222 234678889999999999999999999999976 99999999999999
Q ss_pred CCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 168 GASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 168 G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+ +|+++..+++|.+++++ +|.+.++|++..+ +.+.+++..+.|+|+.||++|+ ..++..+..|+.. +|++.+|
T Consensus 175 G~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG 249 (340)
T COG2130 175 GC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCG 249 (340)
T ss_pred CC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeee
Confidence 99 99999999999999988 9999999999887 9999999999999999999987 6999999999997 9999998
Q ss_pred cCCC--CCccccc----cccccccceEEEeeec-CCCCC--CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc
Q 047713 247 VPNK--DDAFKTH----PMNLLNERTLKGTFFG-NYKPR--SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA 317 (329)
Q Consensus 247 ~~~~--~~~~~~~----~~~~~~~~~~~g~~~~-~~~~~--~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~ 317 (329)
.-.. ....+.. +.++.+.+++.|+... .+.++ +..+++.+|+.+|+++.+. +.+-.|+++++||.-+.+
T Consensus 250 ~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~ 327 (340)
T COG2130 250 AISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLS 327 (340)
T ss_pred ehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhc
Confidence 6322 1111222 3335578899998873 22221 3467889999999987664 445579999999999999
Q ss_pred Ccce-EEEEeeCC
Q 047713 318 GESI-RCIIRMDG 329 (329)
Q Consensus 318 ~~~~-kvvv~~~~ 329 (329)
++.. |.|+++.+
T Consensus 328 G~N~GK~vvKv~~ 340 (340)
T COG2130 328 GKNFGKLVVKVAD 340 (340)
T ss_pred CCccceEEEEecC
Confidence 9875 99998864
No 94
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.97 E-value=1.7e-29 Score=228.58 Aligned_cols=258 Identities=17% Similarity=0.221 Sum_probs=200.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++|+.|++||+|+....
T Consensus 57 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--------------------------------------------- 91 (336)
T TIGR02817 57 GQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD--------------------------------------------- 91 (336)
T ss_pred CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------------------------------
Confidence 56889999999999999999999999999985410
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK-----GQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~iG~aai~la~ 165 (329)
....|+|++|+.++++.++++|+++++++++.+++++.|||+++....++++ |++|||+|+ |.+|++++|+|+
T Consensus 92 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak 170 (336)
T TIGR02817 92 -IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLAR 170 (336)
T ss_pred -CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 0113799999999999999999999999999999999999999878788877 999999986 999999999999
Q ss_pred Hc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 166 VS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 166 ~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+ |+ +|++++.++++.+.++++|+++++++.. + +...+++..++++|+|+|+++....+...+++++++ |+++.
T Consensus 171 ~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~ 245 (336)
T TIGR02817 171 QLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFAL 245 (336)
T ss_pred HhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEE
Confidence 98 98 8999988899999999999998887543 3 777777754448999999987777889999999998 99998
Q ss_pred eccCCCCCccccccccccccceEEEeeec--CCCCC-------CCHHHHHHHHHcCCCCCCcceeeee---ecccHHHHH
Q 047713 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFG--NYKPR-------SDLPSVVEKYMNKELEVEKFITHTV---PFSEINKAF 312 (329)
Q Consensus 245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i~~a~ 312 (329)
++.. ......+ +..++.++.+..+. ....+ ..++++++++.++.+.. .+.+.+ +++++++|+
T Consensus 246 ~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~ 319 (336)
T TIGR02817 246 IDDP---AELDISP-FKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT--TLAETFGTINAANLKRAH 319 (336)
T ss_pred Eccc---ccccchh-hhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHH
Confidence 8532 1112111 22344555443222 11100 23677888898887643 333445 468999999
Q ss_pred HHHHcCcce-EEEEe
Q 047713 313 DLMLAGESI-RCIIR 326 (329)
Q Consensus 313 ~~~~~~~~~-kvvv~ 326 (329)
+.+.+++.. |+++.
T Consensus 320 ~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 320 ALIESGKARGKIVLE 334 (336)
T ss_pred HHHHcCCccceEEEe
Confidence 999988764 77653
No 95
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=3.6e-29 Score=220.42 Aligned_cols=246 Identities=26% Similarity=0.421 Sum_probs=194.5
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
++|.++|+|++|+|+++|++++.|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 688999999999999999999999999999864
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
++|++|++++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|+++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 36899999999999999999999998888 7899999985 5788999999999988999999999999999944
Q ss_pred EEEEcCChhhHHHHHhcC-CceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 172 IIGVDLNPSRFNEAKKFG-VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
|+++++++++.++++++| ++.++...+ ..+.+ ++|++||+++........+++++++ |+++.+|...
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~ 193 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYG 193 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccC
Confidence 999999999999999998 444433211 11233 8999999998777889999999998 9999998654
Q ss_pred CCCccccccccccccceEEEeeecCC---------CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNY---------KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE- 319 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~- 319 (329)
.. .......+..+..++.+...... ...+.++++++++.++.+. +.+.+.|+++++++|++.+++++
T Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~ 270 (277)
T cd08255 194 LK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFEDAPEAYRLLFEDPP 270 (277)
T ss_pred CC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCccCHHHHHHHHHHHHcCCc
Confidence 43 11111112234456655543221 1125688899999998754 34568899999999999998873
Q ss_pred -ceEEEE
Q 047713 320 -SIRCII 325 (329)
Q Consensus 320 -~~kvvv 325 (329)
..|++|
T Consensus 271 ~~~k~~~ 277 (277)
T cd08255 271 ECLKVVL 277 (277)
T ss_pred cceeeeC
Confidence 357764
No 96
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=2.5e-29 Score=226.70 Aligned_cols=261 Identities=18% Similarity=0.261 Sum_probs=204.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+.+|++|+.+++||+|+....
T Consensus 56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------------------------- 90 (327)
T PRK10754 56 SLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS--------------------------------------------- 90 (327)
T ss_pred CCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC---------------------------------------------
Confidence 46889999999999999999999999999984310
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
..|+|++|+.++.+.++++|+++++++++.+++++.++|.++.....+++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 91 ---~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~- 166 (327)
T PRK10754 91 ---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA- 166 (327)
T ss_pred ---CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-
Confidence 13689999999999999999999999999889999999998777788999999999975 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
++++++.++++.+.++++|++.+++..+.+ +.+.+++++++ ++|++||++|. ..+...+++++++ |+++.++...
T Consensus 167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~ 242 (327)
T PRK10754 167 KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNAS 242 (327)
T ss_pred EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCC
Confidence 788888899999999999998888776544 77888888877 89999999976 6778899999998 9999998654
Q ss_pred CCCccccccccc-cccceE-E-EeeecCCCCC----CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713 250 KDDAFKTHPMNL-LNERTL-K-GTFFGNYKPR----SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I 321 (329)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~-~-g~~~~~~~~~----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~ 321 (329)
.... ......+ .++... . .......... +.++++++++.++.+.+..+..+.|++++++++++.+.+++. .
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 321 (327)
T PRK10754 243 GPVT-GVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQG 321 (327)
T ss_pred CCCC-CcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcc
Confidence 2211 1111111 111110 0 0000111111 124567888999987655445688999999999999988775 4
Q ss_pred EEEEe
Q 047713 322 RCIIR 326 (329)
Q Consensus 322 kvvv~ 326 (329)
|+|+.
T Consensus 322 ~~~~~ 326 (327)
T PRK10754 322 SSLLI 326 (327)
T ss_pred eEEEe
Confidence 88875
No 97
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=8e-29 Score=224.52 Aligned_cols=264 Identities=23% Similarity=0.321 Sum_probs=203.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+.+|++++.|++||+|+......|+ +
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~------------~---------------------------- 92 (339)
T cd08249 53 SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP------------N---------------------------- 92 (339)
T ss_pred CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC------------C----------------------------
Confidence 357899999999999999999999999999976443221 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCC----------CCCCeEEEEcC-CHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKP----------KKGQSVAIFGL-GAVGLAA 160 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~iG~aa 160 (329)
...+|+|++|+.++.+.++++|+++++++++.+++++.+||+++....++ +++++|+|+|+ |.+|+++
T Consensus 93 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~ 171 (339)
T cd08249 93 -DPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA 171 (339)
T ss_pred -CCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence 11247999999999999999999999999999999999999987666544 78999999987 9999999
Q ss_pred HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhcc--C
Q 047713 161 AEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD--G 238 (329)
Q Consensus 161 i~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~--~ 238 (329)
+++|+.+|+ +++++. ++++.+.++++|++.+++..+.+ +.+.+++++++++|+|||++|.+..+..+++++++ +
T Consensus 172 ~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~ 247 (339)
T cd08249 172 IQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG 247 (339)
T ss_pred HHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC
Confidence 999999999 677776 56888888999998888876544 77778777766899999999876788999999999 8
Q ss_pred CeEEEEeccCCCCCccccccccccccceEEEeeecC---CC---CCCCHHHHHHHHHcCCCCCCcceeeeee--cccHHH
Q 047713 239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN---YK---PRSDLPSVVEKYMNKELEVEKFITHTVP--FSEINK 310 (329)
Q Consensus 239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~---~~~~~~~~i~~~~~~~l~~~~~~~~~~~--l~~i~~ 310 (329)
|+++.++...... ..... . +...+....+.. .. ....++.+++++.++.+.+. ....++ ++++++
T Consensus 248 -g~~v~~g~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 320 (339)
T cd08249 248 -GKLVSLLPVPEET--EPRKG-V-KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQE 320 (339)
T ss_pred -CEEEEecCCCccc--cCCCC-c-eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHH
Confidence 9999998654332 01000 1 111111111110 01 11235668888888877654 335667 999999
Q ss_pred HHHHHHcCc-ce-EEEEee
Q 047713 311 AFDLMLAGE-SI-RCIIRM 327 (329)
Q Consensus 311 a~~~~~~~~-~~-kvvv~~ 327 (329)
|++.+.+++ .. |+|+++
T Consensus 321 a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 321 GLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHCCCccceEEEEeC
Confidence 999999887 54 888864
No 98
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=5.8e-29 Score=224.49 Aligned_cols=259 Identities=24% Similarity=0.300 Sum_probs=205.6
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 58 ~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~--------------------------------------------- 92 (329)
T cd08250 58 VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS--------------------------------------------- 92 (329)
T ss_pred CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------------------------------
Confidence 45788999999999999999999999999998641
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
.|+|++|+.++.+.++++|+. +.+++++++++.+||+++....++++|++|+|+|+ |.+|++++++|+..|+
T Consensus 93 -----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~ 165 (329)
T cd08250 93 -----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC 165 (329)
T ss_pred -----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence 268999999999999999997 45678899999999999877788999999999985 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.|+++++++++.+.++++|++.+++..+.+ +.+.+....++++|+|||++|. ..+..++++++++ |+++.++...
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~ 240 (329)
T cd08250 166 -HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFIS 240 (329)
T ss_pred -eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEeccc
Confidence 788888888999999999998887765544 6666666554589999999975 6888999999998 9999998654
Q ss_pred CCC---------ccccccccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcC
Q 047713 250 KDD---------AFKTHPMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318 (329)
Q Consensus 250 ~~~---------~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~ 318 (329)
... ...+....+.++.++.+....... ..+.+.++++++.++.+.......+.++++++++|++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 320 (329)
T cd08250 241 GYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSG 320 (329)
T ss_pred CCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcC
Confidence 321 011122335567788776543221 113467788888888776533344668999999999999987
Q ss_pred cce-EEEEe
Q 047713 319 ESI-RCIIR 326 (329)
Q Consensus 319 ~~~-kvvv~ 326 (329)
+.. |++++
T Consensus 321 ~~~~kvvv~ 329 (329)
T cd08250 321 KNIGKVVVE 329 (329)
T ss_pred CCCceEEeC
Confidence 764 77753
No 99
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=1e-28 Score=223.13 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=207.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.+++||+|+...
T Consensus 57 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 90 (334)
T PTZ00354 57 GSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL---------------------------------------------- 90 (334)
T ss_pred CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec----------------------------------------------
Confidence 4567999999999999999999999999998541
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
.+|+|++|++++.++++++|+++++.+++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 91 ---~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~- 166 (334)
T PTZ00354 91 ---PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA- 166 (334)
T ss_pred ---CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 12689999999999999999999999999999999999999877788999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+++.++.++++.+.++++|++.+++....+ .+...++..+++ ++|++||++|. ..+..++++++++ |+++.++...
T Consensus 167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~ 243 (334)
T PTZ00354 167 ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMG 243 (334)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCC
Confidence 666688889999999999998888764421 266677777766 89999999975 6888999999998 9999998543
Q ss_pred CCCcccccc-ccccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-
Q 047713 250 KDDAFKTHP-MNLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES- 320 (329)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~- 320 (329)
......+.. ..+.+..++.++........ +.++++++++.++.+.. .+.+.+++++++++++.+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~ 321 (334)
T PTZ00354 244 GAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNI 321 (334)
T ss_pred CCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCC
Confidence 322110221 12345557777654432110 11356778888886643 46688999999999999987765
Q ss_pred eEEEEeeC
Q 047713 321 IRCIIRMD 328 (329)
Q Consensus 321 ~kvvv~~~ 328 (329)
.|+|+.+.
T Consensus 322 ~kvvv~~~ 329 (334)
T PTZ00354 322 GKVVLTVN 329 (334)
T ss_pred ceEEEecC
Confidence 48888765
No 100
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=4.1e-28 Score=216.54 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=198.0
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH 92 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 92 (329)
.|.++|+|++|+|+++|++++.|++||+|+...
T Consensus 51 ~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----------------------------------------------- 83 (305)
T cd08270 51 DGAVPGWDAAGVVERAAADGSGPAVGARVVGLG----------------------------------------------- 83 (305)
T ss_pred CCCcccceeEEEEEEeCCCCCCCCCCCEEEEec-----------------------------------------------
Confidence 367899999999999999999999999998541
Q ss_pred ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713 93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR 171 (329)
Q Consensus 93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~ 171 (329)
..|+|++|+.++.+.++++|+++++++++++++++.+||+++...... +|++|+|+|+ |.+|++++++|+..|+ +
T Consensus 84 --~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~ 159 (305)
T cd08270 84 --AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-H 159 (305)
T ss_pred --CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-E
Confidence 136999999999999999999999999999999999999986555444 5999999987 9999999999999999 7
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
++.+++++++.+.++++|++..++... ++.++++|+++|++|+ ..+..++++++.+ |+++.+|.....
T Consensus 160 v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~ 227 (305)
T cd08270 160 VVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSGE 227 (305)
T ss_pred EEEEeCCHHHHHHHHHcCCcEEEeccc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCCC
Confidence 888888999999999999876553321 1122479999999987 4788999999998 999999865422
Q ss_pred Cccccccccc-c--ccceEEEeeecC-CCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 252 DAFKTHPMNL-L--NERTLKGTFFGN-YKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 252 ~~~~~~~~~~-~--~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
........+ . ++.++.+..... ....+.+..+++++.++++.+ .+.+.++++++++|++.+.+++.. |+|+.
T Consensus 228 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 304 (305)
T cd08270 228 -PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP--RIGWRGSWTEIDEAAEALLARRFRGKAVLD 304 (305)
T ss_pred -cccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc--eeccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 112222222 2 477777776543 111245777888999998764 356899999999999999877764 88876
Q ss_pred e
Q 047713 327 M 327 (329)
Q Consensus 327 ~ 327 (329)
+
T Consensus 305 ~ 305 (305)
T cd08270 305 V 305 (305)
T ss_pred C
Confidence 4
No 101
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=1.2e-27 Score=215.46 Aligned_cols=259 Identities=18% Similarity=0.222 Sum_probs=194.4
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++ +++.|++||+|++.+.. .|
T Consensus 56 ~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~------------------------~g------------------ 91 (325)
T cd05280 56 NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYD------------------------LG------------------ 91 (325)
T ss_pred CCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccc------------------------cC------------------
Confidence 46889999999999998 56789999999975210 00
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc--CCC-CCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA--KPK-KGQSVAIFGL-GAVGLAAAEGARVS 167 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~iG~aai~la~~~ 167 (329)
...+|+|++|+.++++.++++|+++++++++.+++++.++|.++.... .+. .+++|+|+|+ |.+|++++++|+.+
T Consensus 92 -~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (325)
T cd05280 92 -MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKL 170 (325)
T ss_pred -CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence 112479999999999999999999999999999999999999865443 335 3579999987 99999999999999
Q ss_pred CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+ +|++++.++++.+.++++|++.+++..+ ....+.+... +++|+|||++|. ..+..++++++++ |+++.+|
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g 243 (325)
T cd05280 171 GY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCG 243 (325)
T ss_pred CC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEe
Confidence 99 6888889999999999999988887543 2222333333 389999999977 6889999999998 9999998
Q ss_pred cCCCCCcccccc-ccccccceEEEeeecCCCCCCCH----HHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713 247 VPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDL----PSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI 321 (329)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~----~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~ 321 (329)
....... .... .++.++.++.+........ +.. +.+.+++..+. .+.+...|+++++++|++.+.+++..
T Consensus 244 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~ 318 (325)
T cd05280 244 NAAGPEL-TTTVLPFILRGVSLLGIDSVNCPM-ELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHR 318 (325)
T ss_pred cCCCCcc-ccccchheeeeeEEEEEEeecCch-hHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcc
Confidence 7543221 2222 2235788888766543221 122 23333344442 22367899999999999999988765
Q ss_pred -EEEEee
Q 047713 322 -RCIIRM 327 (329)
Q Consensus 322 -kvvv~~ 327 (329)
|+|+++
T Consensus 319 gk~vv~~ 325 (325)
T cd05280 319 GRTVVKI 325 (325)
T ss_pred eEEEEeC
Confidence 888763
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=5.7e-28 Score=216.81 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=202.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|+ ..+++||+|++.....
T Consensus 55 ~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~------------------------------------------- 89 (320)
T cd08243 55 KFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM------------------------------------------- 89 (320)
T ss_pred CCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC-------------------------------------------
Confidence 4578999999999999995 5799999999753110
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
+....|+|++|+.++++.++++|+++++++++.+++++.+||+++....++++|++|||+|+ |.+|++++++|+.+|+
T Consensus 90 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~- 168 (320)
T cd08243 90 GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA- 168 (320)
T ss_pred CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-
Confidence 00113799999999999999999999999999999999999999888888999999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|++++.++++.+.++++|++.+++. ..+ +...++++ ++++|+++|++|. ..+..++++++++ |+++.+|....
T Consensus 169 ~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~ 242 (320)
T cd08243 169 TVTATTRSPERAALLKELGADEVVID-DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGG 242 (320)
T ss_pred EEEEEeCCHHHHHHHHhcCCcEEEec-Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCC
Confidence 78888889999999999999887754 323 66777777 4489999999986 6788999999998 99999986433
Q ss_pred CCccc-ccc---ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 251 DDAFK-THP---MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 251 ~~~~~-~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
..... ... ..+.++.++.+....... ...+..+++++..+.+.+ ...+.|+++++++|++.+.+++.. |+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 243 QWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 22111 111 112355566554432211 134677888888887653 356789999999999999887764 6664
No 103
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=2e-27 Score=211.44 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=202.4
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|+|++|+|+++|+++++|++||+|++....
T Consensus 35 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~------------------------------------------- 71 (303)
T cd08251 35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE------------------------------------------- 71 (303)
T ss_pred CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC-------------------------------------------
Confidence 3568899999999999999999999999999865210
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
..|+|++|+.++++.++++|++++++++++++.++.+||.++ ....+++|++|+|+++ +.+|++++++|+.+|+
T Consensus 72 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~ 146 (303)
T cd08251 72 ----SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA 146 (303)
T ss_pred ----CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Confidence 136999999999999999999999999999999999999986 5788999999999965 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
++++++.++++.+.++++|++.+++....+ +...+..++++ ++|+++|+++. ......+++++++ |+++.++..
T Consensus 147 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~ 221 (303)
T cd08251 147 -EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMT 221 (303)
T ss_pred -EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH-HHHHHHHHHhccC-cEEEEEecc
Confidence 799998899999999999998888776554 77778887776 89999999964 6788899999998 999998764
Q ss_pred CCCCccccccccccccceEEEeeecCC---CC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNY---KP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI- 321 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~- 321 (329)
............+.++..+....+... .. .+.+.++++++.++.+. ++..+.|++++++++++.+.+++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (303)
T cd08251 222 ALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPFDDIGEAYRYLSDRENIG 299 (303)
T ss_pred CCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcHHHHHHHHHHHHhCCCcc
Confidence 322111111111223333322221111 00 12356678888888654 3456889999999999999877654
Q ss_pred EEE
Q 047713 322 RCI 324 (329)
Q Consensus 322 kvv 324 (329)
|++
T Consensus 300 ~iv 302 (303)
T cd08251 300 KVV 302 (303)
T ss_pred eEe
Confidence 655
No 104
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=2.1e-27 Score=214.02 Aligned_cols=262 Identities=17% Similarity=0.226 Sum_probs=194.6
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++| ++.|++||+|++.+.. .
T Consensus 56 ~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~-------------------------------------------~ 90 (326)
T cd08289 56 RYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD-------------------------------------------L 90 (326)
T ss_pred CCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-------------------------------------------c
Confidence 458999999999999954 5789999999975310 0
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc--cC-CCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV--AK-PKKGQSVAIFGL-GAVGLAAAEGARVS 167 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~-~~~g~~VlI~Ga-g~iG~aai~la~~~ 167 (329)
+....|+|++|+.++++.++++|+++++++++.+++++.|||.++... .. ..++++|||+|+ |.+|++++++|+.+
T Consensus 91 ~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (326)
T cd08289 91 GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL 170 (326)
T ss_pred CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence 011247999999999999999999999999999999999998876432 23 345789999987 99999999999999
Q ss_pred CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
|+ +|+++++++++.+.++++|++.+++..+. ....++++.++++|+|||++|. ..+..++++++++ |+++.+|.
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~ 244 (326)
T cd08289 171 GY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGL 244 (326)
T ss_pred CC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEee
Confidence 99 78888899999999999999888876442 2344555544489999999987 6888999999998 99999987
Q ss_pred CCCCCcccc-ccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCC---CCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713 248 PNKDDAFKT-HPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE---VEKFITHTVPFSEINKAFDLMLAGESI-R 322 (329)
Q Consensus 248 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~---~~~~~~~~~~l~~i~~a~~~~~~~~~~-k 322 (329)
..... ... ...++.++.++.+....... ......+++.+.+ .+. ....+.+.|+++++++|++.+.+++.. |
T Consensus 245 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gk 321 (326)
T cd08289 245 TGGGE-VETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGR 321 (326)
T ss_pred cCCCC-CCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccce
Confidence 53321 221 12233678888876532110 0122334333332 221 122357899999999999999888765 8
Q ss_pred EEEee
Q 047713 323 CIIRM 327 (329)
Q Consensus 323 vvv~~ 327 (329)
+|+++
T Consensus 322 vvv~~ 326 (326)
T cd08289 322 TVVKL 326 (326)
T ss_pred EEEeC
Confidence 87753
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=3.3e-27 Score=211.31 Aligned_cols=258 Identities=21% Similarity=0.293 Sum_probs=206.8
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+.+|++++.|++||+|++..
T Consensus 53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---------------------------------------------- 86 (320)
T cd05286 53 PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---------------------------------------------- 86 (320)
T ss_pred CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec----------------------------------------------
Confidence 4678999999999999999999999999998641
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
..|+|++|+.++.+.++++|+++++.+++.+++.+.+++.++....++++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 87 ---~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~- 162 (320)
T cd05286 87 ---PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA- 162 (320)
T ss_pred ---CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 02689999999999999999999999999999999999998877888999999999985 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.|++++.++++.+.++++|++.+++..+.+ +...+++.+.+ ++|++|+++|+ .....++++++++ |+++.++...
T Consensus 163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~ 238 (320)
T cd05286 163 TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNAS 238 (320)
T ss_pred EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCC
Confidence 788888899999999999998888765544 77778887766 89999999987 5788999999998 9999998644
Q ss_pred CCCccccccccc-cccceEEEeeecCCCCC-----CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713 250 KDDAFKTHPMNL-LNERTLKGTFFGNYKPR-----SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R 322 (329)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~-----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k 322 (329)
.. ........+ .++.++.+......... +.+.++++++.++.+.. ...+.|++++++++++.+.+++.. |
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~~ 315 (320)
T cd05286 239 GP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKV--EIGKRYPLADAAQAHRDLESRKTTGK 315 (320)
T ss_pred CC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcC--cccceEcHHHHHHHHHHHHcCCCCce
Confidence 32 111122222 56666654433222111 22456778888886654 356789999999999999887764 7
Q ss_pred EEEe
Q 047713 323 CIIR 326 (329)
Q Consensus 323 vvv~ 326 (329)
+++.
T Consensus 316 vv~~ 319 (320)
T cd05286 316 LLLI 319 (320)
T ss_pred EEEe
Confidence 7764
No 106
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.96 E-value=5.2e-27 Score=212.32 Aligned_cols=260 Identities=19% Similarity=0.222 Sum_probs=204.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.|++||+|+.....
T Consensus 58 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------------------------- 93 (336)
T cd08252 58 GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI-------------------------------------------- 93 (336)
T ss_pred CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC--------------------------------------------
Confidence 357899999999999999999999999999864210
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK-----GQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~iG~aai~la~ 165 (329)
..+|+|++|+.++.++++++|+++++++++.+++++.+||.++.....+.+ |++|+|+|+ |.+|++++++|+
T Consensus 94 --~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~ 171 (336)
T cd08252 94 --TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAK 171 (336)
T ss_pred --CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 013699999999999999999999999999999999999998777788877 999999985 999999999999
Q ss_pred HcC-CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 166 VSG-ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 166 ~~G-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+| + +|++++.++++.+.++++|++.+++..+ + +...++...++++|++||++|....+..++++++.+ |+++.
T Consensus 172 ~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~ 246 (336)
T cd08252 172 QLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICL 246 (336)
T ss_pred HcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEE
Confidence 999 7 8999988999999999999988887653 3 656666443348999999998777899999999998 99999
Q ss_pred eccCCCCCccccccccccccceEEEeeecCCCC---------CCCHHHHHHHHHcCCCCCCcc-eeeeeecccHHHHHHH
Q 047713 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP---------RSDLPSVVEKYMNKELEVEKF-ITHTVPFSEINKAFDL 314 (329)
Q Consensus 245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~i~~~~~~~l~~~~~-~~~~~~l~~i~~a~~~ 314 (329)
++... ...+.. .+..++.++.+..+..... .+.++.+++++.++.+.+... ....++++++++|++.
T Consensus 247 ~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~ 323 (336)
T cd08252 247 IVDPQ--EPLDLG-PLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHAL 323 (336)
T ss_pred ecCCC--Ccccch-hhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHH
Confidence 98642 112211 1225677777655432110 023667888888887653211 1235799999999999
Q ss_pred HHcCcce-EEEE
Q 047713 315 MLAGESI-RCII 325 (329)
Q Consensus 315 ~~~~~~~-kvvv 325 (329)
+.+++.. |+++
T Consensus 324 ~~~~~~~~~vv~ 335 (336)
T cd08252 324 LESGKTIGKIVL 335 (336)
T ss_pred HHcCCccceEEe
Confidence 9988765 7765
No 107
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=3.2e-27 Score=208.23 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=201.6
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH 92 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 92 (329)
.|.++|+|++|+|+++|++++.|++||+|+...
T Consensus 23 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------------------------------- 55 (288)
T smart00829 23 GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------------------------------- 55 (288)
T ss_pred CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------------------------------
Confidence 368999999999999999999999999998641
Q ss_pred ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713 93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR 171 (329)
Q Consensus 93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~ 171 (329)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.....+.+|++|+|+|+ |.+|++++++|+..|+ +
T Consensus 56 ---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~ 131 (288)
T smart00829 56 ---PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-E 131 (288)
T ss_pred ---CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-E
Confidence 2689999999999999999999999999999999999998777788999999999985 9999999999999999 7
Q ss_pred EEEEcCChhhHHHHHhcCC--ceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 172 IIGVDLNPSRFNEAKKFGV--TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
|++++.++++.+.++++|+ +.+++..+.+ +.+.+.+..++ ++|+++|++|+ ..+..++++++++ |+++.++..
T Consensus 132 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~ 207 (288)
T smart00829 132 VFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG-EFLDASLRCLAPG-GRFVEIGKR 207 (288)
T ss_pred EEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH-HHHHHHHHhccCC-cEEEEEcCc
Confidence 8999889999999999998 6777665544 77777777766 89999999985 6788899999998 999999864
Q ss_pred CCCCccccccccccccceEEEeeecCCC-----CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYK-----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R 322 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k 322 (329)
............+.++.++.+....... ..+.+..+++++.++.+.. ...+.|++++++++++.+..+... |
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (288)
T smart00829 208 DIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPISDVEDAFRYMQQGKHIGK 285 (288)
T ss_pred CCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcHHHHHHHHHHHhcCCCcce
Confidence 3211111111223445555444332111 0123566778888886643 245789999999999999887654 5
Q ss_pred EE
Q 047713 323 CI 324 (329)
Q Consensus 323 vv 324 (329)
++
T Consensus 286 iv 287 (288)
T smart00829 286 VV 287 (288)
T ss_pred Ee
Confidence 54
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=2.3e-27 Score=214.05 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=198.8
Q ss_pred CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713 14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF 93 (329)
Q Consensus 14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 93 (329)
+.++|+|++|+|+++|++ .|++||+|+..
T Consensus 65 ~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------------------------------------------------- 93 (329)
T cd05288 65 GEPMRGGGVGEVVESRSP--DFKVGDLVSGF------------------------------------------------- 93 (329)
T ss_pred CCcccCceEEEEEecCCC--CCCCCCEEecc-------------------------------------------------
Confidence 568999999999999964 79999999853
Q ss_pred cccccccccEEeee-ccEEEcCCCCC--ccchhc-ccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713 94 VGTSTFSEYTVTHV-GCVAKINPAAP--LDKVCV-LSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG 168 (329)
Q Consensus 94 ~~~g~~a~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G 168 (329)
++|++|+.++. +.++++|++++ +.++++ +++++.+||+++.....+.++++|||+|+ |.+|++++++|+..|
T Consensus 94 ---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G 170 (329)
T cd05288 94 ---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLG 170 (329)
T ss_pred ---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcC
Confidence 47999999999 99999999985 445555 89999999999877788999999999985 999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 169 ASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+ +++++++++++.+.+++ +|++.+++..+.+ +...+.+.+++++|++||++|. ..+..++++++++ |+++.++.
T Consensus 171 ~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~ 245 (329)
T cd05288 171 A-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGA 245 (329)
T ss_pred C-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEee
Confidence 9 78888889999999888 9998888876544 7777777765589999999976 6888999999998 99999986
Q ss_pred CCCCCccc-----cccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 248 PNKDDAFK-----THPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 248 ~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
........ .....+.++.++.+........ .+.+.++++++.++.+... ....+++++++++++.+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~ 323 (329)
T cd05288 246 ISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--EDVVEGLENAPEAFLGLFTGKN 323 (329)
T ss_pred ccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--ccccccHHHHHHHHHHHhcCCC
Confidence 44322111 1222356777887765433211 1346778888989877654 3356899999999999987765
Q ss_pred e-EEE
Q 047713 321 I-RCI 324 (329)
Q Consensus 321 ~-kvv 324 (329)
. |++
T Consensus 324 ~gkvv 328 (329)
T cd05288 324 TGKLV 328 (329)
T ss_pred cccee
Confidence 4 665
No 109
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=9.5e-27 Score=209.52 Aligned_cols=261 Identities=17% Similarity=0.222 Sum_probs=195.3
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|.++|||++|+|++ ++++.|++||+|++.+... +
T Consensus 54 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~--------------~--------------------------- 90 (323)
T TIGR02823 54 RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGL--------------G--------------------------- 90 (323)
T ss_pred CCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCC--------------C---------------------------
Confidence 35689999999999998 6678899999999653100 0
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCC-eEEEEcC-CHHHHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQ-SVAIFGL-GAVGLAAAEGARV 166 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlI~Ga-g~iG~aai~la~~ 166 (329)
...+|++++|+.+|.+.++++|+++++++++.++..+.+++.++.. ...+.+|+ +|+|+|+ |.+|++++++|+.
T Consensus 91 --~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~ 168 (323)
T TIGR02823 91 --VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168 (323)
T ss_pred --CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 0114799999999999999999999999999999999999887533 33478898 9999987 9999999999999
Q ss_pred cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+|+ ++++++.++++.+.++++|++.+++..+.. ..++.+..+++|+++|++|. ..+..++++++++ |+++.+|
T Consensus 169 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g 241 (323)
T TIGR02823 169 LGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACG 241 (323)
T ss_pred cCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEc
Confidence 999 677777778888999999998888764422 24455544479999999986 4788999999998 9999998
Q ss_pred cCCCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713 247 VPNKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI- 321 (329)
Q Consensus 247 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~- 321 (329)
..... ..... ..++.++.++.+........ .+.++.+.+++..+.+. +. ...|+++++++|++.+.+++..
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~~~~~a~~~~~~~~~~~ 317 (323)
T TIGR02823 242 LAGGP-DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLE--SI-TREITLEELPEALEQILAGQHRG 317 (323)
T ss_pred ccCCC-CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeeecHHHHHHHHHHHhCCCccc
Confidence 75332 12221 22236778887765432111 01234455556566543 23 4689999999999999988765
Q ss_pred EEEEee
Q 047713 322 RCIIRM 327 (329)
Q Consensus 322 kvvv~~ 327 (329)
|+|+++
T Consensus 318 k~vv~~ 323 (323)
T TIGR02823 318 RTVVDV 323 (323)
T ss_pred eEEEeC
Confidence 888753
No 110
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=4e-27 Score=207.88 Aligned_cols=257 Identities=26% Similarity=0.339 Sum_probs=203.6
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|++++.|++||+|++..
T Consensus 25 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--------------------------------------------- 59 (293)
T cd05195 25 PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--------------------------------------------- 59 (293)
T ss_pred CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------------------------------
Confidence 45689999999999999999999999999998642
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
.|+|++|+.++.+.++++|+.+++.+++.+++++.++|.++.+...+++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 60 -----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~ 134 (293)
T cd05195 60 -----PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134 (293)
T ss_pred -----cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 2689999999999999999999999999999999999998878788999999999975 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcC--CceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 170 SRIIGVDLNPSRFNEAKKFG--VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
++++++.++++.+.+++++ ++.+++..+.+ +...+++.+.+ ++|+++|++|.. .+..++++++++ |+++.++
T Consensus 135 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g 209 (293)
T cd05195 135 -EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG 209 (293)
T ss_pred -EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence 7888888888999988888 66777655443 77778887766 899999999875 889999999998 9999998
Q ss_pred cCCCCCccccccccccccceEEEeeecCCC---C---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYK---P---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
..............+.++..+......... . .+.+..+++++.++.+. +.....+++++++++++.+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 287 (293)
T cd05195 210 KRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH 287 (293)
T ss_pred ccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence 654321111112223344555443332211 0 12466788888888654 445678999999999999987765
Q ss_pred e-EEE
Q 047713 321 I-RCI 324 (329)
Q Consensus 321 ~-kvv 324 (329)
. |++
T Consensus 288 ~~~iv 292 (293)
T cd05195 288 IGKVV 292 (293)
T ss_pred Cceec
Confidence 4 654
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.95 E-value=1.3e-26 Score=211.21 Aligned_cols=265 Identities=15% Similarity=0.243 Sum_probs=193.0
Q ss_pred CCcccCCcceEEEEEecCCCC-cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 13 FPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
+|.++|+|++|+|+++|++++ .|++||+|++.....|+
T Consensus 58 ~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~----------------------------------------- 96 (352)
T cd08247 58 KEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYG----------------------------------------- 96 (352)
T ss_pred CCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCC-----------------------------------------
Confidence 378999999999999999998 89999999975332111
Q ss_pred eccccccccccEEeeec----cEEEcCCCCCccchhcccccccchhhhhhhcc-CCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713 92 HFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGISTGFGATVNVA-KPKKGQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~iG~aai~la~ 165 (329)
..|+|++|++++.. .++++|+++++++++.++.++.|||+++.... ++++|++|+|+|+ +.+|++++++|+
T Consensus 97 ---~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~ 173 (352)
T cd08247 97 ---GQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK 173 (352)
T ss_pred ---CCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence 14799999999987 78999999999999999999999999876666 7999999999987 899999999999
Q ss_pred HcCC-CEEEEEcCChhhHHHHHhcCCceeeCCCCCCc--hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhc---cC
Q 047713 166 VSGA-SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK--PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVH---DG 238 (329)
Q Consensus 166 ~~G~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~---~~ 238 (329)
.+|. +++++++. +++.+.++++|++.+++..+.+. .+.+.++..+++ ++|++||++|.......++++++ ++
T Consensus 174 ~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~ 252 (352)
T cd08247 174 NHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN 252 (352)
T ss_pred hcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC
Confidence 8743 35667654 55566788999988887654321 133444444434 89999999988667888999999 98
Q ss_pred CeEEEEeccCCC-CCcc---------cccccccc-----ccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeee
Q 047713 239 WGVAVLVGVPNK-DDAF---------KTHPMNLL-----NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV 303 (329)
Q Consensus 239 ~G~vv~~g~~~~-~~~~---------~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~ 303 (329)
|+++.++.... .... ......+. +...+....... ..+.++.+++++.++.+. +.+.+.+
T Consensus 253 -G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~--~~~~~~~ 327 (352)
T cd08247 253 -GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVK--PPIDSVY 327 (352)
T ss_pred -CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeE--eeeccEe
Confidence 99998742211 1000 00001111 122222111101 013467788888888664 3466889
Q ss_pred ecccHHHHHHHHHcCcc-eEEEEee
Q 047713 304 PFSEINKAFDLMLAGES-IRCIIRM 327 (329)
Q Consensus 304 ~l~~i~~a~~~~~~~~~-~kvvv~~ 327 (329)
+++++++|++.+++++. .|+++++
T Consensus 328 ~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 328 PFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred cHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 99999999999988775 4888753
No 112
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.95 E-value=2.6e-26 Score=206.13 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=205.8
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+++|+++++|++||+|++.+...
T Consensus 55 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~------------------------------------------ 92 (325)
T cd08253 55 PPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGW------------------------------------------ 92 (325)
T ss_pred CCCCeecccceEEEEEeeCCCCCCCCCCCEEEEecccc------------------------------------------
Confidence 45788999999999999999999999999999763210
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
....|++++|+.++.+.++++|+++++++++.+++++.+||+++....++.+|++|+|+|+ +.+|++++++++..|+
T Consensus 93 --~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~ 170 (325)
T cd08253 93 --GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170 (325)
T ss_pred --CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 0013689999999999999999999999999999999999998877789999999999986 9999999999999998
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|++++.++++.+.++++|++.+++....+ +...+++.+.+ ++|++++++|. ......+++++++ |+++.++..
T Consensus 171 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~ 245 (325)
T cd08253 171 -RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSG 245 (325)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeec
Confidence 788888889999999999998888765544 77777777666 89999999976 4677888999998 999999864
Q ss_pred CCCCccccccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI 324 (329)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv 324 (329)
.........+ .+.++.++.+........ .+.+..+.+++..+.+. +.....|++++++++++.+.++... |++
T Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~kvv 322 (325)
T cd08253 246 GLRGTIPINP-LMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR--PVIAREYPLEEAAAAHEAVESGGAIGKVV 322 (325)
T ss_pred CCcCCCChhH-HHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc--CccccEEcHHHHHHHHHHHHcCCCcceEE
Confidence 4221111111 244566665554322111 11244555666777554 3356889999999999999877654 877
Q ss_pred Ee
Q 047713 325 IR 326 (329)
Q Consensus 325 v~ 326 (329)
++
T Consensus 323 ~~ 324 (325)
T cd08253 323 LD 324 (325)
T ss_pred Ee
Confidence 75
No 113
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.95 E-value=1.8e-26 Score=206.82 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=205.1
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|.++|||++|+|+++|++++.+++||+|+....
T Consensus 55 ~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~-------------------------------------------- 90 (323)
T cd05276 55 PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA-------------------------------------------- 90 (323)
T ss_pred CCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecC--------------------------------------------
Confidence 356789999999999999999999999999986421
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA 169 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~ 169 (329)
+|+|++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++|+|+|+ |.+|++++++++..|+
T Consensus 91 -----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~ 165 (323)
T cd05276 91 -----GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA 165 (323)
T ss_pred -----CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC
Confidence 2689999999999999999999999999999999999998777788999999999986 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
.++.++.++++.+.++++|.+.+++....+ +...+.....+ ++|++||++|. ..+..++++++++ |+++.++..
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~ 240 (323)
T cd05276 166 -RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLL 240 (323)
T ss_pred -EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecC
Confidence 788888888899989999988777765543 66777777666 89999999986 4578889999997 999999764
Q ss_pred CCCCcccccc-ccccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713 249 NKDDAFKTHP-MNLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 249 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~ 320 (329)
.... ..... .++.++.++.+......... ..+.++++++.++.+. +..+..|++++++++++.+.++..
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 317 (323)
T cd05276 241 GGAK-AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR--PVIDKVFPLEEAAEAHRRMESNEH 317 (323)
T ss_pred CCCC-CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHHHHHHHhCCC
Confidence 3221 11111 12357888887765443111 1245567778777664 346788999999999999987765
Q ss_pred e-EEE
Q 047713 321 I-RCI 324 (329)
Q Consensus 321 ~-kvv 324 (329)
. |++
T Consensus 318 ~~kvv 322 (323)
T cd05276 318 IGKIV 322 (323)
T ss_pred cceEe
Confidence 4 655
No 114
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=8.2e-28 Score=229.80 Aligned_cols=226 Identities=19% Similarity=0.228 Sum_probs=195.8
Q ss_pred cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEc
Q 047713 98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVD 176 (329)
Q Consensus 98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~ 176 (329)
++++.+.++.+++|.+|.++.+++|+++|+.|+|+|++|..+...++|+++||| |+|++|++||.+|.++|+ .|+++.
T Consensus 1506 sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTV 1584 (2376)
T KOG1202|consen 1506 SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTV 1584 (2376)
T ss_pred hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEec
Confidence 789999999999999999999999999999999999999999999999999999 569999999999999999 899999
Q ss_pred CChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 177 LNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 177 ~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
.++||++++.+ |-.+.+-|.++.+ |...+..-+.| |+|+|+++. ..+.++.+++||+-. |++..+|..+..
T Consensus 1585 GSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdlVLNSL-aeEkLQASiRCLa~~-GRFLEIGKfDLS 1660 (2376)
T KOG1202|consen 1585 GSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDLVLNSL-AEEKLQASIRCLALH-GRFLEIGKFDLS 1660 (2376)
T ss_pred CcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeeeehhhh-hHHHHHHHHHHHHhc-Ceeeeecceecc
Confidence 99999998754 3345566666655 99999999988 999999999 678999999999998 999999987777
Q ss_pred CccccccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCC--CCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713 252 DAFKTHPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKEL--EVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326 (329)
Q Consensus 252 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l--~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~ 326 (329)
...++....+.+|.++.|..+.+..+ .+++.++..++++|.- .+.|+.+++|+-.++++||+.|.+++++ |+|++
T Consensus 1661 qNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvik 1740 (2376)
T KOG1202|consen 1661 QNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIK 1740 (2376)
T ss_pred cCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEE
Confidence 66777777889999999987654432 2356777787777632 3678889999999999999999999986 99987
Q ss_pred eC
Q 047713 327 MD 328 (329)
Q Consensus 327 ~~ 328 (329)
+-
T Consensus 1741 vr 1742 (2376)
T KOG1202|consen 1741 VR 1742 (2376)
T ss_pred Ec
Confidence 63
No 115
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.95 E-value=5.3e-27 Score=213.49 Aligned_cols=257 Identities=21% Similarity=0.296 Sum_probs=193.4
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
..+|.++|||++|+|+++|++++.|++||+|++.+..
T Consensus 71 ~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------------------------------------------- 107 (350)
T cd08248 71 IEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP------------------------------------------- 107 (350)
T ss_pred CCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC-------------------------------------------
Confidence 4568999999999999999999999999999975321
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC----CCeEEEEcC-CHHHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK----GQSVAIFGL-GAVGLAAAEGAR 165 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~iG~aai~la~ 165 (329)
...|+|++|+.++++.++++|+++++++++.+++++.++|+++.....+.+ |++|+|+|+ |.+|++++++|+
T Consensus 108 ---~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~ 184 (350)
T cd08248 108 ---WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLK 184 (350)
T ss_pred ---CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHH
Confidence 113799999999999999999999999999999999999998777677654 999999985 999999999999
Q ss_pred HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713 166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+|+ +|+++..+ ++.+.++++|.+.+++..+.+ +...+... +++|++||++|.. ....++++++++ |+++.+
T Consensus 185 ~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~ 256 (350)
T cd08248 185 AWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTL 256 (350)
T ss_pred HCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEe
Confidence 9999 67777654 577788999998888765433 44444331 3799999999864 888999999998 999999
Q ss_pred ccCCCCCcc--cc--cc-----ccccccce-------EEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHH
Q 047713 246 GVPNKDDAF--KT--HP-----MNLLNERT-------LKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309 (329)
Q Consensus 246 g~~~~~~~~--~~--~~-----~~~~~~~~-------~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~ 309 (329)
+........ .. .. .+...... +.... .......+..+++++.++.+. +.+.+.|++++++
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~ 332 (350)
T cd08248 257 VSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIK--PVIDKVFPFEEVP 332 (350)
T ss_pred cCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEe--cccceeecHHHHH
Confidence 854321110 00 00 00000000 00000 011124578899999998764 3467889999999
Q ss_pred HHHHHHHcCcce-EEEE
Q 047713 310 KAFDLMLAGESI-RCII 325 (329)
Q Consensus 310 ~a~~~~~~~~~~-kvvv 325 (329)
++++.+.+++.. |+++
T Consensus 333 ~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 333 EAYEKVESGHARGKTVI 349 (350)
T ss_pred HHHHHHhcCCCceEEEe
Confidence 999999877654 7665
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2.9e-26 Score=206.12 Aligned_cols=263 Identities=23% Similarity=0.369 Sum_probs=206.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+.+|++++.|++||+|+..+...
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~------------------------------------------- 92 (328)
T cd08268 56 PLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD------------------------------------------- 92 (328)
T ss_pred CCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccc-------------------------------------------
Confidence 4578999999999999999999999999999763211
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
....|++++|+.++++.++++|+++++++++.+++++.++|.++.....+.++++|+|+|+ |.+|++++++++..|+
T Consensus 93 -~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~- 170 (328)
T cd08268 93 -LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA- 170 (328)
T ss_pred -cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-
Confidence 0114789999999999999999999999999999999999999877888999999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+++.++.++++.+.++++|.+.+++..... +...+.+...+ ++|++++++|+ .....++++++++ |+++.++...
T Consensus 171 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~ 246 (328)
T cd08268 171 TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALS 246 (328)
T ss_pred EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCC
Confidence 788888888888888889988777765544 66677777666 89999999987 6778889999998 9999998644
Q ss_pred CCCccccccc-cccccceEEEeeecCCCC-CCC----HHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713 250 KDDAFKTHPM-NLLNERTLKGTFFGNYKP-RSD----LPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R 322 (329)
Q Consensus 250 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-~~~----~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k 322 (329)
... ...... .+.++.++.+........ ... +..+.+++.++.+.. .....|++++++++++.+.+++.. |
T Consensus 247 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (328)
T cd08268 247 GEP-TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGK 323 (328)
T ss_pred CCC-CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCce
Confidence 321 122222 356777777765432111 112 334445566665543 356789999999999999877654 8
Q ss_pred EEEe
Q 047713 323 CIIR 326 (329)
Q Consensus 323 vvv~ 326 (329)
++++
T Consensus 324 vv~~ 327 (328)
T cd08268 324 IVVT 327 (328)
T ss_pred EEEe
Confidence 8775
No 117
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2.5e-26 Score=207.37 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=193.3
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+++|++++.|++||+|++...
T Consensus 56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------------------------- 90 (331)
T cd08273 56 PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR--------------------------------------------- 90 (331)
T ss_pred CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC---------------------------------------------
Confidence 46889999999999999999999999999996521
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
.|+|++|+.++.+.++++|+++++++++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++|+..|+
T Consensus 91 ----~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~- 165 (331)
T cd08273 91 ----VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA- 165 (331)
T ss_pred ----CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence 2689999999999999999999999999999999999998877788999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|+.++. +++.+.++++|+.. ++....+ +... ....+++|+++|++|+. .+..++++++.+ |+++.++....
T Consensus 166 ~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~ 237 (331)
T cd08273 166 EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSS 237 (331)
T ss_pred EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCC
Confidence 7888876 88888889999754 3333322 3332 23334899999999875 488999999998 99999986543
Q ss_pred CCccccc---------------cccccccceEEEeeecCC-C---CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713 251 DDAFKTH---------------PMNLLNERTLKGTFFGNY-K---PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311 (329)
Q Consensus 251 ~~~~~~~---------------~~~~~~~~~~~g~~~~~~-~---~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a 311 (329)
....... .....+..++........ . ..+.+..+++++.++.+. +.+.+.+++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a 315 (331)
T cd08273 238 LLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLPLSEVAEA 315 (331)
T ss_pred CCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHH
Confidence 3221111 011112222222221100 0 013567788889898764 346688999999999
Q ss_pred HHHHHcCcce-EEEE
Q 047713 312 FDLMLAGESI-RCII 325 (329)
Q Consensus 312 ~~~~~~~~~~-kvvv 325 (329)
++.+.+++.. |+|+
T Consensus 316 ~~~~~~~~~~gkvv~ 330 (331)
T cd08273 316 HRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHcCCCcceEEe
Confidence 9999877654 6654
No 118
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.95 E-value=7.3e-26 Score=203.27 Aligned_cols=259 Identities=22% Similarity=0.297 Sum_probs=207.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+.+|+++..+++||+|+....
T Consensus 56 ~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~--------------------------------------------- 90 (325)
T TIGR02824 56 GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA--------------------------------------------- 90 (325)
T ss_pred CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccC---------------------------------------------
Confidence 45789999999999999999999999999986411
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
+|+|++|+.++.+.++++|+++++.+++++++++.++|.++.....++++++|+|+|+ |.+|++++++++..|+
T Consensus 91 ----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~- 165 (325)
T TIGR02824 91 ----GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA- 165 (325)
T ss_pred ----CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence 2689999999999999999999999999999999999998778889999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
++++++.++++.+.++++|.+.+++....+ +...++....+ ++|++++++|. ..+..++++++++ |+++.++...
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~ 241 (325)
T TIGR02824 166 RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQG 241 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCC
Confidence 788888888888888899987777655433 66777777766 89999999976 5778899999998 9999998643
Q ss_pred CCCccccccc-cccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713 250 KDDAFKTHPM-NLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI 321 (329)
Q Consensus 250 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~ 321 (329)
.... ..... .+.++.++.+......... ..+.++++++.++.+. +..++.+++++++++++.+.+++..
T Consensus 242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (325)
T TIGR02824 242 GRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDHI 318 (325)
T ss_pred CCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCCc
Confidence 2211 22222 2367888888765442110 1235567788787654 3456889999999999998877654
Q ss_pred -EEEEee
Q 047713 322 -RCIIRM 327 (329)
Q Consensus 322 -kvvv~~ 327 (329)
|+++++
T Consensus 319 ~~~v~~~ 325 (325)
T TIGR02824 319 GKIVLTV 325 (325)
T ss_pred ceEEEeC
Confidence 777753
No 119
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=1.4e-25 Score=201.86 Aligned_cols=261 Identities=16% Similarity=0.223 Sum_probs=196.1
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|++ ++++.+++||+|++.... .+
T Consensus 55 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~--------------~~--------------------------- 91 (324)
T cd08288 55 RTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG--------------VG--------------------------- 91 (324)
T ss_pred CCCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc--------------CC---------------------------
Confidence 34688999999999999 778889999999974210 00
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--hccCCC-CCCeEEEEcC-CHHHHHHHHHHHH
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--NVAKPK-KGQSVAIFGL-GAVGLAAAEGARV 166 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~iG~aai~la~~ 166 (329)
....|+|++|+.++.+.++++|+++++++++.++.++.+++.++. ...... ++++|+|+|+ |.+|++++|+|+.
T Consensus 92 --~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~ 169 (324)
T cd08288 92 --ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLAR 169 (324)
T ss_pred --CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 011378999999999999999999999999999999999887643 123445 6789999987 9999999999999
Q ss_pred cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+|+ ++++++.++++.+.++++|++.++++.+ ....++.+..+++|.++|++|. ..+..++..++.+ |+++.+|
T Consensus 170 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G 242 (324)
T cd08288 170 LGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACG 242 (324)
T ss_pred CCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEE
Confidence 999 7888888999999999999988887654 2334555555578999999976 4677788888887 9999998
Q ss_pred cCCCCCccccccc-cccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713 247 VPNKDDAFKTHPM-NLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI- 321 (329)
Q Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~- 321 (329)
..... ....... ++.++.++.+........ .+.+..+.+++..+.+.+ +.+.++++++++|++.+++++..
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~ 318 (324)
T cd08288 243 LAGGA-DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRG 318 (324)
T ss_pred ecCCC-CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccC
Confidence 64321 1111222 236788888765432221 123445666677775532 36899999999999999988765
Q ss_pred EEEEee
Q 047713 322 RCIIRM 327 (329)
Q Consensus 322 kvvv~~ 327 (329)
|+++++
T Consensus 319 ~vvv~~ 324 (324)
T cd08288 319 RVVVDV 324 (324)
T ss_pred eEEEeC
Confidence 888753
No 120
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.5e-25 Score=201.42 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=203.0
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
..|.++|||++|+|+++|+++..|++||+|++.... +.
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--------------------------~~---------------- 93 (326)
T cd08272 56 PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG--------------------------LG---------------- 93 (326)
T ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC--------------------------cC----------------
Confidence 457899999999999999999999999999965210 00
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
...|+|++|+.++++.++++|+.+++.+++.++..+.+||+++....++++|++++|+|+ |.+|++++++|+..|+
T Consensus 94 --~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~- 170 (326)
T cd08272 94 --GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA- 170 (326)
T ss_pred --CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-
Confidence 013689999999999999999999999999999999999998878889999999999985 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.|++++.+ ++.+.++++|++.+++... . +.+.+.+.+.+ ++|+++|++|+ ..+..++++++++ |+++.++...
T Consensus 171 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~ 244 (326)
T cd08272 171 RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA 244 (326)
T ss_pred EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC
Confidence 78888777 8888889999887776533 2 66677777776 89999999987 5678899999997 9999997653
Q ss_pred CCCccccccccccccceEEEeeecC--C---C---CCCCHHHHHHHHHcCCCCCCccee-eeeecccHHHHHHHHHcCcc
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGN--Y---K---PRSDLPSVVEKYMNKELEVEKFIT-HTVPFSEINKAFDLMLAGES 320 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~--~---~---~~~~~~~~i~~~~~~~l~~~~~~~-~~~~l~~i~~a~~~~~~~~~ 320 (329)
. ...... ..++.++.+..... . . ..+.+..+++++.++.+. +.++ +.|++++++++++.+.+++.
T Consensus 245 -~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (326)
T cd08272 245 -T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPLEEAAAAHARLESGSA 318 (326)
T ss_pred -c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecHHHHHHHHHHHHcCCc
Confidence 1 121111 25666666655321 1 0 012466677888887654 3334 78999999999999987765
Q ss_pred e-EEEEee
Q 047713 321 I-RCIIRM 327 (329)
Q Consensus 321 ~-kvvv~~ 327 (329)
. |+++++
T Consensus 319 ~~~vv~~~ 326 (326)
T cd08272 319 RGKIVIDV 326 (326)
T ss_pred ccEEEEEC
Confidence 4 888753
No 121
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.94 E-value=2.6e-25 Score=199.37 Aligned_cols=257 Identities=23% Similarity=0.453 Sum_probs=207.1
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|+|++|+|+.+|++++.+++||+|+..+.
T Consensus 56 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~--------------------------------------------- 90 (323)
T cd08241 56 PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG--------------------------------------------- 90 (323)
T ss_pred CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC---------------------------------------------
Confidence 44778999999999999999999999999996520
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
.|++++|+.++.+.++++|++++..++++++.++.+|+.++.....++++++|+|+|+ |.+|++++++|+..|+
T Consensus 91 ----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~- 165 (323)
T cd08241 91 ----QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA- 165 (323)
T ss_pred ----CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-
Confidence 2689999999999999999999999888899999999998776788999999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.|+.++.++++.+.++++|++.+++....+ +...+...+.+ ++|++++++|. ..+..++++++++ |+++.++...
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~ 241 (323)
T cd08241 166 RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFAS 241 (323)
T ss_pred EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCC
Confidence 788888888999999999988777765544 77778887776 89999999986 6778899999998 9999998643
Q ss_pred CCCcccccc-ccccccceEEEeeecCCCC------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713 250 KDDAFKTHP-MNLLNERTLKGTFFGNYKP------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI- 321 (329)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~- 321 (329)
.... .... ..+.++.++.+.....+.. .+.+.++++++.++.+. ++....|++++++++++.+.+++..
T Consensus 242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
T cd08241 242 GEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATG 318 (323)
T ss_pred CCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCC
Confidence 2211 0111 2345677887766543321 12456788888888664 3467889999999999998877654
Q ss_pred EEEE
Q 047713 322 RCII 325 (329)
Q Consensus 322 kvvv 325 (329)
|+++
T Consensus 319 ~vvv 322 (323)
T cd08241 319 KVVL 322 (323)
T ss_pred cEEe
Confidence 7665
No 122
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5.8e-25 Score=198.70 Aligned_cols=260 Identities=21% Similarity=0.352 Sum_probs=201.5
Q ss_pred CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI 90 (329)
Q Consensus 11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 90 (329)
+.+|.++|||++|+|+.+|++++++++||+|+....
T Consensus 54 ~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-------------------------------------------- 89 (337)
T cd08275 54 PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR-------------------------------------------- 89 (337)
T ss_pred CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--------------------------------------------
Confidence 355789999999999999999999999999996521
Q ss_pred eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc-C
Q 047713 91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS-G 168 (329)
Q Consensus 91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~-G 168 (329)
.|+|++|+.++.+.++++|+.+++++++.+++++.++|+++....++++|++|+|+|+ |.+|++++++|+.. +
T Consensus 90 -----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~ 164 (337)
T cd08275 90 -----FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN 164 (337)
T ss_pred -----CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccC
Confidence 2689999999999999999999999999999999999999878888999999999987 99999999999988 3
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
. .++.. .++++.+.++++|++.+++....+ +...+++.+++++|+++|++|+ .....++++++++ |+++.+|..
T Consensus 165 ~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~ 238 (337)
T cd08275 165 V-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAA 238 (337)
T ss_pred c-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeec
Confidence 3 23222 345677888889988887766544 7777777775589999999986 4678899999998 999999864
Q ss_pred CCCCc--cc-------------cc-cccccccceEEEeeecCCCC-C----CCHHHHHHHHHcCCCCCCcceeeeeeccc
Q 047713 249 NKDDA--FK-------------TH-PMNLLNERTLKGTFFGNYKP-R----SDLPSVVEKYMNKELEVEKFITHTVPFSE 307 (329)
Q Consensus 249 ~~~~~--~~-------------~~-~~~~~~~~~~~g~~~~~~~~-~----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~ 307 (329)
..... .. .. ...+.++.++.+........ . ..+.++++++.++.+. +.....|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 316 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIK--PKIDSVFPFEE 316 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCC--CceeeEEcHHH
Confidence 42211 10 00 12345677777765432111 1 1256677888888654 34568899999
Q ss_pred HHHHHHHHHcCcce-EEEEee
Q 047713 308 INKAFDLMLAGESI-RCIIRM 327 (329)
Q Consensus 308 i~~a~~~~~~~~~~-kvvv~~ 327 (329)
++++++.+.+++.. |+++++
T Consensus 317 ~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 317 VGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHcCCCcceEEEeC
Confidence 99999999877654 887753
No 123
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2.6e-25 Score=199.98 Aligned_cols=260 Identities=22% Similarity=0.311 Sum_probs=198.0
Q ss_pred CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH 92 (329)
Q Consensus 13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 92 (329)
+|.++|||++|+|+.+|++++.+++||+|++.+..
T Consensus 56 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--------------------------------------------- 90 (325)
T cd08271 56 YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL--------------------------------------------- 90 (325)
T ss_pred CCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC---------------------------------------------
Confidence 47899999999999999999999999999975311
Q ss_pred ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713 93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR 171 (329)
Q Consensus 93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~ 171 (329)
...|+|++|+.++.+.++++|++++..+++.+++++.+++.++....++++|++|+|+|+ +.+|++++++|+..|+ .
T Consensus 91 -~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~ 168 (325)
T cd08271 91 -ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R 168 (325)
T ss_pred -CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence 013689999999999999999999999999999999999999878888999999999987 8999999999999999 6
Q ss_pred EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
++.+. ++++.+.++++|++.+++..... +...+++...+ ++|++++++++. .....++++++. |+++.++....
T Consensus 169 v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~ 243 (325)
T cd08271 169 VITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPD 243 (325)
T ss_pred EEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCC
Confidence 77665 67777888889998888765544 66777777766 899999999874 456789999998 99999875432
Q ss_pred CCc-cccccccccccceEEEeeecCC-----CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EE
Q 047713 251 DDA-FKTHPMNLLNERTLKGTFFGNY-----KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RC 323 (329)
Q Consensus 251 ~~~-~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kv 323 (329)
... ..+......++..+........ ...+.+.++++++.++.+.+ ...+.|+++++.++++.+.++... |+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~ki 321 (325)
T cd08271 244 ASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKI 321 (325)
T ss_pred CcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceE
Confidence 210 0111111122233322221111 00123466788888887643 345789999999999999877654 88
Q ss_pred EEe
Q 047713 324 IIR 326 (329)
Q Consensus 324 vv~ 326 (329)
+++
T Consensus 322 v~~ 324 (325)
T cd08271 322 VVT 324 (325)
T ss_pred EEE
Confidence 775
No 124
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2.6e-25 Score=199.45 Aligned_cols=255 Identities=25% Similarity=0.289 Sum_probs=190.5
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+++|++++.+++||+|+.....
T Consensus 57 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------------------------- 92 (319)
T cd08267 57 PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-------------------------------------------- 92 (319)
T ss_pred CCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--------------------------------------------
Confidence 357899999999999999999999999999865321
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
...|+|++|+.++.+.++++|++++.++++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+
T Consensus 93 --~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~- 169 (319)
T cd08267 93 --KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA- 169 (319)
T ss_pred --CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence 013689999999999999999999999999999999999999777777999999999987 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCH-HHHHHHHHhhccCCeEEEEeccC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|++++.+ ++.+.++++|.+.+++....+ +. +..+.+ ++|++++++|.. ......+..++++ |+++.++..
T Consensus 170 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~ 242 (319)
T cd08267 170 HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGG 242 (319)
T ss_pred EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccc
Confidence 78887755 788888999998887765543 33 334444 899999999742 2333333348887 999999865
Q ss_pred CCCCcccc---ccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713 249 NKDDAFKT---HPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI 324 (329)
Q Consensus 249 ~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv 324 (329)
........ ..........+....... ..+.+.++++++.++.+. +++.+.|+++++++|++.+.+++.. |++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 243 PSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred cccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 43221111 011111112222111111 135688888999888654 3467899999999999999877654 554
No 125
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.94 E-value=6.5e-25 Score=195.70 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=194.7
Q ss_pred CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713 12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY 91 (329)
Q Consensus 12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 91 (329)
.+|.++|||++|+|+.+|++++.+++||+|+..+..
T Consensus 58 ~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~-------------------------------------------- 93 (309)
T cd05289 58 TLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF-------------------------------------------- 93 (309)
T ss_pred CCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC--------------------------------------------
Confidence 458899999999999999999999999999975311
Q ss_pred eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713 92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS 170 (329)
Q Consensus 92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~ 170 (329)
...|+|++|+.++...++++|+++++..++.+++.+.+++.++.....+.+|++|+|+|+ |.+|++++++++..|+
T Consensus 94 --~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~- 170 (309)
T cd05289 94 --TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA- 170 (309)
T ss_pred --CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence 013689999999999999999999999999999999999998777777999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|++++.++ +.+.++++|.+.+++....+ +.+ ...+ ++|+++|++|+. ....++++++++ |+++.++...
T Consensus 171 ~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~ 241 (309)
T cd05289 171 RVIATASAA-NADFLRSLGADEVIDYTKGD--FER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPP 241 (309)
T ss_pred EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCC
Confidence 677777666 78888889987777665433 332 3334 899999999874 788999999998 9999998643
Q ss_pred CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI 324 (329)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv 324 (329)
.... ..+.++.++........ .+.+.++++++.++.+. +.+++.|++++++++++.+.+++.. |++
T Consensus 242 ~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 242 PAEQ-----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred cchh-----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 3211 12234444444332111 25688888999888653 3467889999999999998877654 554
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=2.9e-24 Score=180.37 Aligned_cols=249 Identities=17% Similarity=0.260 Sum_probs=195.2
Q ss_pred cceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccccccc
Q 047713 20 EAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTF 99 (329)
Q Consensus 20 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 99 (329)
..+|+|++ |+-+++++||.|+... +|
T Consensus 78 ~GV~kVi~--S~~~~~~~GD~v~g~~----------------------------------------------------gW 103 (343)
T KOG1196|consen 78 FGVAKVID--SGHPNYKKGDLVWGIV----------------------------------------------------GW 103 (343)
T ss_pred CceEEEEe--cCCCCCCcCceEEEec----------------------------------------------------cc
Confidence 67899999 5668899999999652 79
Q ss_pred cccEEeeecc--EEEcCC--CCCccc-hhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEE
Q 047713 100 SEYTVTHVGC--VAKINP--AAPLDK-VCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRII 173 (329)
Q Consensus 100 a~~~~v~~~~--~~~~p~--~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv 173 (329)
.||.+++... ..+||. ++++.. .-.+..+..|||..+.+...+++|++|+|.|| |.+|+++.|+|+.+|+ +|+
T Consensus 104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VV 182 (343)
T KOG1196|consen 104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVV 182 (343)
T ss_pred eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEE
Confidence 9999887643 344543 333332 24577789999999999999999999999976 9999999999999999 999
Q ss_pred EEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC--
Q 047713 174 GVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK-- 250 (329)
Q Consensus 174 ~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~-- 250 (329)
++..+++|.++++. +|.+..+|+.++. +...++++..++++|+.||.+|+ ..++..+..++.. ||++.+|.-..
T Consensus 183 GsaGS~EKv~ll~~~~G~d~afNYK~e~-~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN 259 (343)
T KOG1196|consen 183 GSAGSKEKVDLLKTKFGFDDAFNYKEES-DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYN 259 (343)
T ss_pred EecCChhhhhhhHhccCCccceeccCcc-CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhcc
Confidence 99999999998764 7999999998873 38888999888899999999987 6899999999997 99999996432
Q ss_pred -CCc--cccccccccccceEEEeeecCCCCC--CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713 251 -DDA--FKTHPMNLLNERTLKGTFFGNYKPR--SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI 324 (329)
Q Consensus 251 -~~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv 324 (329)
+.+ +.-....+.|.+++.|+.+..+.++ +.+..+..++.+|++....-+ .-.|+..++||.-|-+++.. |.+
T Consensus 260 ~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqi 337 (343)
T KOG1196|consen 260 LENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQL 337 (343)
T ss_pred ccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceE
Confidence 111 1122344678888888766544332 345678888999988654322 33699999999999988864 888
Q ss_pred EeeC
Q 047713 325 IRMD 328 (329)
Q Consensus 325 v~~~ 328 (329)
+.+.
T Consensus 338 v~va 341 (343)
T KOG1196|consen 338 VKVA 341 (343)
T ss_pred EEee
Confidence 7764
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=2.6e-17 Score=128.08 Aligned_cols=128 Identities=28% Similarity=0.450 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHH
Q 047713 155 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFE 233 (329)
Q Consensus 155 ~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~ 233 (329)
++|++++|+|+.+|+ +|++++++++++++++++|+++++++++.+ +.+.+++++++ ++|+||||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 999999999999999999999999998877 99999999998 99999999998899999999
Q ss_pred hhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHH
Q 047713 234 CVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYM 289 (329)
Q Consensus 234 ~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 289 (329)
+++++ |+++.+|.............++.+++++.|++.++. ++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSP---EDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGH---HHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCH---HHHHHHHHHhc
Confidence 99998 999999987622222222445689999999987764 67888888775
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.71 E-value=7.2e-18 Score=126.97 Aligned_cols=83 Identities=35% Similarity=0.589 Sum_probs=72.0
Q ss_pred CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713 9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK 88 (329)
Q Consensus 9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 88 (329)
....+|.++|||++|+|+++|++|+.|++||+|++.+...|+.|.+|+.++++.|.+....
T Consensus 27 ~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~------------------- 87 (109)
T PF08240_consen 27 PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVL------------------- 87 (109)
T ss_dssp STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEET-------------------
T ss_pred cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEe-------------------
Confidence 4568899999999999999999999999999999999999999999999999999876553
Q ss_pred ceeeccccccccccEEeeeccEEEc
Q 047713 89 PIYHFVGTSTFSEYTVTHVGCVAKI 113 (329)
Q Consensus 89 ~~~~~~~~g~~a~~~~v~~~~~~~~ 113 (329)
+...+|+|+||+.+|+++++||
T Consensus 88 ---g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 88 ---GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp ---TTSSTCSSBSEEEEEGGGEEEE
T ss_pred ---EcCCCCcccCeEEEehHHEEEC
Confidence 1224689999999999999985
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.39 E-value=8.8e-12 Score=113.74 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=130.2
Q ss_pred hhhhhccCC-CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc
Q 047713 134 GATVNVAKP-KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 134 ~~l~~~~~~-~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
.++.+..++ .+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+.+.++.+|++.+ + ..+.+
T Consensus 190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v----- 255 (413)
T cd00401 190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV----- 255 (413)
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH-----
Confidence 334444333 689999999999999999999999999 89999999999999999998432 1 21222
Q ss_pred CCccEEEEecCCHHHHHHH-HHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHH--HHHHHHH
Q 047713 213 GGVDRSVECTGSVQAMISA-FECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLP--SVVEKYM 289 (329)
Q Consensus 213 ~~~d~Vid~~g~~~~~~~~-~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~i~~~~ 289 (329)
.++|+||+++|....+... ++.++++ |.++.+|.. +..++. ..+..+++++.++..... ...++ +.+.++.
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~-~~L~~~el~i~g~~~~~~--~~~~~~g~aI~LLa 329 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDV-KGLKENAVEVVNIKPQVD--RYELPDGRRIILLA 329 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCH-HHHHhhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence 2589999999988888876 8999998 999999854 222222 223457788887664322 12455 6899999
Q ss_pred cCCC-CCCcceeee-----eecc-cHHHHHHHHHcCcc--eEEEEee
Q 047713 290 NKEL-EVEKFITHT-----VPFS-EINKAFDLMLAGES--IRCIIRM 327 (329)
Q Consensus 290 ~~~l-~~~~~~~~~-----~~l~-~i~~a~~~~~~~~~--~kvvv~~ 327 (329)
+|++ .+...+++. ++|+ |+.++++.+.++.. .|+++.+
T Consensus 330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 9988 777777777 8999 99999999887654 3776654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.30 E-value=7.2e-11 Score=110.46 Aligned_cols=154 Identities=18% Similarity=0.183 Sum_probs=110.0
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCC-----------chHHHHHH
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYD-----------KPVQQVIA 208 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~ 208 (329)
...++++|+|+|+|++|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..+.+ .++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35689999999999999999999999999 89999999999999999999854 5543211 12333333
Q ss_pred hh-hc--CCccEEEEecCCH-----HH-HHHHHHhhccCCeEEEEeccCC-CCCcccc-cccccc-ccceEEEeeecCCC
Q 047713 209 DM-TN--GGVDRSVECTGSV-----QA-MISAFECVHDGWGVAVLVGVPN-KDDAFKT-HPMNLL-NERTLKGTFFGNYK 276 (329)
Q Consensus 209 ~~-~~--~~~d~Vid~~g~~-----~~-~~~~~~~l~~~~G~vv~~g~~~-~~~~~~~-~~~~~~-~~~~~~g~~~~~~~ 276 (329)
+. .. +++|+||+|+|.+ .. .+.+++.++++ |.++.++... +...... ....+. +++++.|.....
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P-- 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP-- 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc--
Confidence 32 33 2799999999853 35 48999999998 9999998742 3211222 123344 788998876321
Q ss_pred CCCCHH-HHHHHHHcCCCCCCccee
Q 047713 277 PRSDLP-SVVEKYMNKELEVEKFIT 300 (329)
Q Consensus 277 ~~~~~~-~~i~~~~~~~l~~~~~~~ 300 (329)
..+. .+.+++.++.+.+.++++
T Consensus 317 --~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 --SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred --hhHHHHHHHHHHhCCccHHHHhc
Confidence 2344 588888888776555544
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.15 E-value=7.7e-12 Score=96.73 Aligned_cols=120 Identities=20% Similarity=0.342 Sum_probs=74.5
Q ss_pred cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC--CHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccc
Q 047713 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG--SVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNER 265 (329)
Q Consensus 188 lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g--~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~ 265 (329)
||+++++++.+.+ + ...+++|+|||++| ....+..++++| ++ |+++.++. .... .....+..
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-----~~~~-~~~~~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-----DLPS-FARRLKGR 64 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-----HHHH-HHHHHHCH
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-----cccc-hhhhhccc
Confidence 6899999887543 4 22348999999998 655557777888 87 99999874 1000 00011112
Q ss_pred eEEEeeecCCC----CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713 266 TLKGTFFGNYK----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII 325 (329)
Q Consensus 266 ~~~g~~~~~~~----~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv 325 (329)
.+.+..+.... ..+.++++++++.+|++. +.+.++|||+++++|++.+++++.. |+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~--~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLK--PPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeE--EeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22222221100 113589999999999764 5688899999999999999998865 8875
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.67 E-value=1.7e-07 Score=82.27 Aligned_cols=165 Identities=18% Similarity=0.261 Sum_probs=101.9
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh--h
Q 047713 139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM--T 211 (329)
Q Consensus 139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~--~ 211 (329)
.+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +...+- .... .+.++ .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~------d~~~l~~~ 143 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLG------EIEALPVA 143 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEc------chhhCCCC
Confidence 45678999999999887 88888888877753 799999999998888764 322111 1111 12222 2
Q ss_pred cCCccEEEEec------CCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHH
Q 047713 212 NGGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVV 285 (329)
Q Consensus 212 ~~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 285 (329)
.+.+|+|+... .....+..+.++|+++ |+++..+...... . +..+.+...+.+...... ....++.
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~~---~~~~e~~ 215 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE---L-PEEIRNDAELYAGCVAGA---LQEEEYL 215 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC---C-CHHHHHhHHHHhccccCC---CCHHHHH
Confidence 33799998543 2346789999999998 9999876543221 1 111222222222122122 2455566
Q ss_pred HHHHc-CCCCCCcceeeeeecccHHHHHHHH--HcCc
Q 047713 286 EKYMN-KELEVEKFITHTVPFSEINKAFDLM--LAGE 319 (329)
Q Consensus 286 ~~~~~-~~l~~~~~~~~~~~l~~i~~a~~~~--~~~~ 319 (329)
+++.+ |...........++++++.++++.+ ..++
T Consensus 216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 216 AMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 66665 3333333345668899999999988 4444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.46 E-value=1.8e-06 Score=81.02 Aligned_cols=105 Identities=18% Similarity=0.200 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC------------CchHHHHHHhh
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY------------DKPVQQVIADM 210 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~------------~~~~~~~~~~~ 210 (329)
.++++|+|+|+|.+|+++++.|+.+|+ .|++++.++++++.++++|++.+.....+ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763322111 01233333333
Q ss_pred hc---CCccEEEEec---CCHH---HHHHHHHhhccCCeEEEEeccCC
Q 047713 211 TN---GGVDRSVECT---GSVQ---AMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 211 ~~---~~~d~Vid~~---g~~~---~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
.. .++|+||+++ |.+. ..+..++.++++ +.++.++...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~ 287 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQ 287 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCC
Confidence 33 2799999999 6433 457778999998 9999997543
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.21 E-value=2.4e-05 Score=72.18 Aligned_cols=103 Identities=22% Similarity=0.314 Sum_probs=76.8
Q ss_pred hhhhhhccCCC-CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh
Q 047713 133 FGATVNVAKPK-KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 133 ~~~l~~~~~~~-~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
|.++....++. +|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.. +.+ +.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH----
Confidence 33333333444 79999999999999999999999999 899999888887666666653 221 22222
Q ss_pred cCCccEEEEecCCHHHHH-HHHHhhccCCeEEEEeccCCC
Q 047713 212 NGGVDRSVECTGSVQAMI-SAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 212 ~~~~d~Vid~~g~~~~~~-~~~~~l~~~~G~vv~~g~~~~ 250 (329)
.++|+||+++|....+. ..+..++++ +.++.+|..+.
T Consensus 266 -~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 -ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred -hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 25899999999877776 577888887 88888886554
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.14 E-value=6.6e-05 Score=66.52 Aligned_cols=96 Identities=14% Similarity=0.257 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.+.+|+|+|.|.+|+.+++.++.+|+ +|.++++++++.+.++++|.+.+. + ..+.+.. .++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~~--------~-~~l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPFH--------L-SELAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeeec--------H-HHHHHHh-CCCCEEEECCC
Confidence 58999999999999999999999999 899999998888888888875331 1 1122222 25899999986
Q ss_pred CHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 224 SVQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
..-.....++.++++ +.++.++...+.
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 533345666778887 899988765443
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.09 E-value=1.7e-07 Score=87.05 Aligned_cols=160 Identities=17% Similarity=0.144 Sum_probs=102.9
Q ss_pred ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccc
Q 047713 16 IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVG 95 (329)
Q Consensus 16 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 95 (329)
--|.|+++.+.+|+++++. +|++.+.+ ||-|.+| ++.|...... +...
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~----------------------g~~l 136 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV----------------------GKVL 136 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc----------------------hHHH
Confidence 5688999999999998876 56666666 7777777 3334432221 1223
Q ss_pred cccccccEEeeeccEEE---c-CCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713 96 TSTFSEYTVTHVGCVAK---I-NPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171 (329)
Q Consensus 96 ~g~~a~~~~v~~~~~~~---~-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~ 171 (329)
++.|++++.++. .+.. | +..+|...+|. -. ........++++|+|+|+|.+|..+++.++..|+.+
T Consensus 137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av--------~l-a~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAAV--------EL-AERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH--------HH-HHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 468999998876 3332 3 22333222211 00 112233467899999999999999999999999668
Q ss_pred EEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713 172 IIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA 227 (329)
Q Consensus 172 vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~ 227 (329)
|++++++.++.+ ++++++.. .+. +. .+.+.. .++|+||+|++.+..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~-------~~-~l~~~l-~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVK-------FE-DLEEYL-AEADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-Eee-------HH-HHHHHH-hhCCEEEECCCCCCc
Confidence 999988887754 67777753 222 11 112211 258999999986554
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.04 E-value=7.5e-05 Score=68.49 Aligned_cols=92 Identities=27% Similarity=0.369 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
.+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+ .+.|+||+++
T Consensus 193 l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~~aDVVItaT 258 (406)
T TIGR00936 193 IAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----KIGDIFITAT 258 (406)
T ss_pred CCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----hcCCEEEECC
Confidence 679999999999999999999999999 799998888877667766753 221 22222 2479999999
Q ss_pred CCHHHHHH-HHHhhccCCeEEEEeccCC
Q 047713 223 GSVQAMIS-AFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 223 g~~~~~~~-~~~~l~~~~G~vv~~g~~~ 249 (329)
|....+.. .+..++++ +.++.+|...
T Consensus 259 G~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 259 GNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred CCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 98887764 77888887 8888887654
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.00 E-value=0.00013 Score=63.20 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=79.9
Q ss_pred cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713 98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177 (329)
Q Consensus 98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~ 177 (329)
+|.+|.. +...+..+++.+++-.+. -+.+.. ....+. ..+.++.+||-.|+|. |..++.+++ .|..+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555544 667788888887766532 111111 111111 1246789999999986 888876555 57657999999
Q ss_pred ChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--CccEEEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG--GVDRSVECTGSV---QAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 178 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~d~Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
++...+.+++.-....+. + .+ .+..+ .+|+|+-..... ..++...+.|+++ |.++..+.
T Consensus 151 s~~~l~~A~~n~~~~~~~--~-------~~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi 214 (250)
T PRK00517 151 DPQAVEAARENAELNGVE--L-------NV-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI 214 (250)
T ss_pred CHHHHHHHHHHHHHcCCC--c-------eE-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence 999888776532111010 0 00 01112 589998655332 2456777889998 99998754
No 139
>PLN02494 adenosylhomocysteinase
Probab=97.94 E-value=0.00013 Score=67.62 Aligned_cols=92 Identities=22% Similarity=0.365 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
-.|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|...+ + ..+.++ ..|+|+++.
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal~-----~ADVVI~tT 317 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVVS-----EADIFVTTT 317 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHHh-----hCCEEEECC
Confidence 569999999999999999999999999 89999888877666666776421 1 222222 379999999
Q ss_pred CCHHHH-HHHHHhhccCCeEEEEeccCC
Q 047713 223 GSVQAM-ISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 223 g~~~~~-~~~~~~l~~~~G~vv~~g~~~ 249 (329)
|....+ ...++.++++ +.++.+|...
T Consensus 318 Gt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 318 GNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred CCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 876654 7889999998 9999998743
No 140
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=3.7e-05 Score=63.33 Aligned_cols=112 Identities=18% Similarity=0.209 Sum_probs=79.1
Q ss_pred hcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcCCceee-CCC
Q 047713 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN----EAKKFGVTEFV-NPK 197 (329)
Q Consensus 123 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~----~~~~lg~~~~~-~~~ 197 (329)
-++..+...|. +.+...+++|++||-+|+|. |..++-+|+..+ +|+++++.++=.+ .++++|...+. ...
T Consensus 53 qtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g 127 (209)
T COG2518 53 QTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG 127 (209)
T ss_pred ceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence 34444444444 56788999999999999874 999999999888 8999999887433 35668875433 222
Q ss_pred CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 198 DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.. +-+... .||.|+-+.+.+..-+..++.|+++ |+++..-.
T Consensus 128 DG~-------~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 128 DGS-------KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred Ccc-------cCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 221 112223 7999998887765667888999998 99887644
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.80 E-value=5.3e-05 Score=67.74 Aligned_cols=107 Identities=21% Similarity=0.224 Sum_probs=73.8
Q ss_pred cEEEcCCCCCccchhcccccccchhhhhhhccCC----CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-H
Q 047713 109 CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKP----KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF-N 183 (329)
Q Consensus 109 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~-~ 183 (329)
..+++|+.+..+.++.. .+.++++.++. .+.. .++.+|+|.|+|.+|..+++.++..|.++|+.+++++++. +
T Consensus 140 ~a~~~~k~vr~et~i~~-~~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISR-GAVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCC-CCcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 45667787777765543 35666666632 2222 4789999999999999999999988877898898887764 6
Q ss_pred HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713 184 EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA 227 (329)
Q Consensus 184 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~ 227 (329)
+++++|.. +++.. ++.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 22211 122222 248999999987654
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.79 E-value=0.00021 Score=70.89 Aligned_cols=113 Identities=23% Similarity=0.288 Sum_probs=72.9
Q ss_pred cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713 98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD 176 (329)
Q Consensus 98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~ 176 (329)
++++|..+++..++.+ +.++++++..-. ....+..+|+++||+|+ |.+|.++++.+...|+ +|+.++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5667777887777777 667777654110 00122346899999986 9999999999999999 899998
Q ss_pred CChhhHHHH-HhcCC-----ceeeCCCCCCchHHHHHHhhh--cCCccEEEEecC
Q 047713 177 LNPSRFNEA-KKFGV-----TEFVNPKDYDKPVQQVIADMT--NGGVDRSVECTG 223 (329)
Q Consensus 177 ~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~--~~~~d~Vid~~g 223 (329)
++.++.+.+ ++++. ....|..+.+ ...+.+.+.. .+++|+||+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCC
Confidence 888776543 33443 1122333221 2333333332 237999999998
No 143
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.71 E-value=0.002 Score=56.83 Aligned_cols=187 Identities=14% Similarity=0.164 Sum_probs=106.2
Q ss_pred EEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCC---CCccccCCccccccCCCceeeccccccc
Q 047713 23 GIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD---RGVMINDGQSRFSIKGKPIYHFVGTSTF 99 (329)
Q Consensus 23 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 99 (329)
++|++ |.++.+.+|+||+.... +.++.....+ ++-....++-|..+ .-.|
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~P---------------~ashl~l~p~~v~~~~f~d~s~hR~~l----------~~~Y 91 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYFP---------------MASHLVLEPGKVSPGGFRDVSPHRAGL----------PPIY 91 (314)
T ss_pred EEEEe--eCCCCccCccEEEeecc---------------ccceeEEeccccCCCccccChhhhCcC----------chhh
Confidence 77777 89999999999996543 3333322211 11111111111111 1256
Q ss_pred cccEEeeeccEEEcCCCCCccchhcccc-cccchhhhhhhcc---CCCCCCeEEEEcC-CHHHHHHHHHHH-HcCCCEEE
Q 047713 100 SEYTVTHVGCVAKINPAAPLDKVCVLSC-GISTGFGATVNVA---KPKKGQSVAIFGL-GAVGLAAAEGAR-VSGASRII 173 (329)
Q Consensus 100 a~~~~v~~~~~~~~p~~~~~~~aa~~~~-~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~iG~aai~la~-~~G~~~vv 173 (329)
-+|.++..+..+.- +.+..-++.- -+.|.|-. .+.. ..-..+.|+|..+ +-+++..+..++ ..+.-++|
T Consensus 92 N~Y~r~~~d~~y~~----~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~v 166 (314)
T PF11017_consen 92 NQYLRVSADPAYDP----EREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVV 166 (314)
T ss_pred hceeecCCCcccCc----chhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEE
Confidence 67777665544311 1122222222 24444432 2211 1233456777754 889998888888 44444899
Q ss_pred EEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 174 GVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 174 ~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+++ |+.+.++.+.+|. +.++.+++ +.++....--+++|..|........-+.+...--..+.+|.+..
T Consensus 167 glT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 167 GLT-SARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEe-cCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 996 5666779999996 67776643 33333344568899999988877777777654134566665443
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.70 E-value=4.5e-05 Score=74.02 Aligned_cols=81 Identities=22% Similarity=0.305 Sum_probs=59.1
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHhcCCceeeCCCC-
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN---------------------PSRFNEAKKFGVTEFVNPKD- 198 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~---------------------~~~~~~~~~lg~~~~~~~~~- 198 (329)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 68888742 34567788899877665433
Q ss_pred CCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713 199 YDKPVQQVIADMTNGGVDRSVECTGSVQA 227 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~~~d~Vid~~g~~~~ 227 (329)
.+... .. ...++|+||+++|....
T Consensus 212 ~~~~~-~~----~~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 212 EDITL-EQ----LEGEFDAVFVAIGAQLG 235 (564)
T ss_pred CcCCH-HH----HHhhCCEEEEeeCCCCC
Confidence 11001 11 12369999999997543
No 145
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.64 E-value=0.00046 Score=63.20 Aligned_cols=96 Identities=25% Similarity=0.250 Sum_probs=65.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
+.+|+|+|+|.+|+.+++.|+.+|+ +|++++.++++.+.+. .++........+ . ..+.+.. ..+|+||++++
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~----~-~~l~~~l-~~aDvVI~a~~ 239 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN----A-YEIEDAV-KRADLLIGAVL 239 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC----H-HHHHHHH-ccCCEEEEccc
Confidence 4568899999999999999999999 7999999888877664 455432111111 1 1222222 25899999973
Q ss_pred ---C--HH-HHHHHHHhhccCCeEEEEeccC
Q 047713 224 ---S--VQ-AMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 224 ---~--~~-~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
. +. .....++.++++ +.++.++..
T Consensus 240 ~~g~~~p~lit~~~l~~mk~g-~vIvDva~d 269 (370)
T TIGR00518 240 IPGAKAPKLVSNSLVAQMKPG-AVIVDVAID 269 (370)
T ss_pred cCCCCCCcCcCHHHHhcCCCC-CEEEEEecC
Confidence 2 21 135677778887 999998753
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.58 E-value=0.0019 Score=57.02 Aligned_cols=95 Identities=14% Similarity=0.266 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.|++++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ . +. .+.+.. ..+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence 48899999999999999999999998 89999888887777766665322 1 11 122222 25899999985
Q ss_pred CHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 224 SVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
..-.-...++.++++ ..++.++....
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 432224456677776 78888876443
No 147
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.52 E-value=0.00061 Score=60.28 Aligned_cols=97 Identities=23% Similarity=0.333 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDR 217 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 217 (329)
..++++||-.|+|. |..++.+++ .|..+|++++.++...+.+++. +....+.....+ ......+++|+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence 45789999999877 877777665 5666999999999887776653 211111000000 11122347999
Q ss_pred EEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713 218 SVECTGSV---QAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 218 Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
|+...... ..+....++|+++ |.++..+.
T Consensus 229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 98654322 3456677889998 99987764
No 148
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.47 E-value=0.00086 Score=62.46 Aligned_cols=93 Identities=22% Similarity=0.321 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.-.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|+... + +.+.+ ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence 3479999999999999999999999999 89999887776655544564321 1 32222 248999999
Q ss_pred cCCHHHHH-HHHHhhccCCeEEEEeccCC
Q 047713 222 TGSVQAMI-SAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 222 ~g~~~~~~-~~~~~l~~~~G~vv~~g~~~ 249 (329)
.|....+. ..++.++++ +.++.+|..+
T Consensus 317 tGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred CCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 98766664 788899998 9999988653
No 149
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.33 E-value=0.0014 Score=55.22 Aligned_cols=79 Identities=23% Similarity=0.342 Sum_probs=59.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC----ceeeCCCCCCchHHHHHHhhhcC--Cc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV----TEFVNPKDYDKPVQQVIADMTNG--GV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~--~~ 215 (329)
+++.++|+|+ +++|.+++..+...|+ +|+.+.+..++++. +.+++. ...+|..+.. +....+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence 3578999997 9999999999999999 89999999998875 566773 2233444332 355556656555 69
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+.++..|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999883
No 150
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.28 E-value=0.0011 Score=51.50 Aligned_cols=73 Identities=29% Similarity=0.401 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCc--eeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVT--EFVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
++.+++|+|+|++|.+++..+...|+++++.+.++.+|.+. +++++.. ..+...+ +...+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 58999999999999999999999999889999999887665 4556322 1222221 22111 15899999
Q ss_pred ecCCH
Q 047713 221 CTGSV 225 (329)
Q Consensus 221 ~~g~~ 225 (329)
+++.+
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98754
No 151
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.21 E-value=0.0011 Score=61.89 Aligned_cols=161 Identities=15% Similarity=0.151 Sum_probs=95.1
Q ss_pred ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccc
Q 047713 16 IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVG 95 (329)
Q Consensus 16 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 95 (329)
--|+|+++.+.+|+++++..-.|+.-+ |..|+.-+ ..|...... +...
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI---------lgQvk~a~-~~a~~~g~~----------------------g~~l 138 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI---------LGQVKDAY-ALAQEAGTV----------------------GTIL 138 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH---------HHHHHHHH-HHHHHcCCc----------------------hHHH
Confidence 469999999999999988755555433 23333221 112111100 0112
Q ss_pred cccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc---CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEE
Q 047713 96 TSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA---KPKKGQSVAIFGLGAVGLAAAEGARVSGASRI 172 (329)
Q Consensus 96 ~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~iG~aai~la~~~G~~~v 172 (329)
++.|++.+.++. .+..+. +....+.++++.++.... .-.++.+|+|+|+|.+|.++++.++..|+++|
T Consensus 139 ~~lf~~a~~~~k--------~v~~~t-~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 139 NRLFQKAFSVAK--------RVRTET-GIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred HHHHHHHHHHHh--------hHhhhc-CCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 345666555543 222211 122224455555532221 12578999999999999999999999998788
Q ss_pred EEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713 173 IGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA 227 (329)
Q Consensus 173 v~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~ 227 (329)
+.+.++.++.+ +++++|.+ +++ +. .+.+.. .++|+||+++|.+..
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~-------~~-~~~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIP-------LD-ELPEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-Eee-------HH-HHHHHh-ccCCEEEECCCCCCc
Confidence 88888887754 67778753 222 21 112211 258999999986544
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.21 E-value=0.0029 Score=56.65 Aligned_cols=103 Identities=20% Similarity=0.217 Sum_probs=71.3
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.+...++++++||..|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+... ..+ ..+...+
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~- 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE- 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc-
Confidence 3455678899999999997 59999999998763 36999999998766554 3565433222 111 2211111
Q ss_pred hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713 211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+.+|+|+.+.+........++.|+++ |+++..
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999887666666788899998 987764
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.17 E-value=0.0053 Score=51.11 Aligned_cols=102 Identities=24% Similarity=0.404 Sum_probs=69.0
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcC-CceeeCCCCCCchHHHHHHhhh
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFG-VTEFVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
....+.++++|+..|+|. |..++.+|+..+. .+|++++.+++..+.++ .++ .+.+.... .+ ..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhhc-
Confidence 456788999999999987 9999999887642 38999999998877654 455 22222111 11 22222222
Q ss_pred cCCccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713 212 NGGVDRSVECTGS---VQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 212 ~~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999975442 45677888899998 998753
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.008 Score=51.25 Aligned_cols=102 Identities=25% Similarity=0.366 Sum_probs=64.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceee--CCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTEFV--NPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~~~--~~~~~~~~~~~~~~~~~~--~~ 214 (329)
++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +....+ |..+. ....+.+++... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST-ESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence 4689999987 9999999999999999 788888888776554 222 211222 22221 123333333222 36
Q ss_pred ccEEEEecCCHH-----------------------HHHHHHHhhccCCeEEEEeccC
Q 047713 215 VDRSVECTGSVQ-----------------------AMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 215 ~d~Vid~~g~~~-----------------------~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|.++.+.|... .++..+..+.++ |+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 899998886321 134445556666 888888754
No 155
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.15 E-value=0.0033 Score=57.86 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=74.3
Q ss_pred cccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHH
Q 047713 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVI 207 (329)
Q Consensus 128 ~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 207 (329)
+....+..+.....+++|++||.+|+| .|..++.+++..|+ +|++++.+++..+.+++......+.....+ +
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~---- 222 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--Y---- 222 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--h----
Confidence 333444446677788999999999985 57788888988888 899999999999988765321111111111 2
Q ss_pred HhhhcCCccEEEE-----ecCC---HHHHHHHHHhhccCCeEEEEecc
Q 047713 208 ADMTNGGVDRSVE-----CTGS---VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 208 ~~~~~~~~d~Vid-----~~g~---~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.++ .+.+|.|+. .+|. ...++.+.+.|+++ |.++....
T Consensus 223 ~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 223 RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 112 346998863 3332 34577888899998 99887643
No 156
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.04 E-value=0.0091 Score=48.37 Aligned_cols=104 Identities=19% Similarity=0.320 Sum_probs=70.3
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+...++++|+.++=+|+|. |..++++++..-..+|++++.+++..+..+ +||.+.+...+-. ..+.+..+.
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~- 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP- 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence 3457889999777778763 777788886555559999999999887654 5776644332211 222232211
Q ss_pred CCccEEEEecC--CHHHHHHHHHhhccCCeEEEEecc
Q 047713 213 GGVDRSVECTG--SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 213 ~~~d~Vid~~g--~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.+|.+|---| -+..++.+++.|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 5899884433 345688999999998 99887654
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0065 Score=53.33 Aligned_cols=78 Identities=15% Similarity=0.270 Sum_probs=54.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhh---hcCCccEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADM---TNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~---~~~~~d~V 218 (329)
.+++++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+.+.+.+.+ .|..+. +++.+.+.+. .++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~-~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEP-ESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCH-HHHHHHHHHHHHHcCCCccEE
Confidence 3678999987 9999999998888898 89999888888777666554432 233332 1233333332 33479999
Q ss_pred EEecC
Q 047713 219 VECTG 223 (329)
Q Consensus 219 id~~g 223 (329)
|++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 158
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.91 E-value=0.0063 Score=49.88 Aligned_cols=78 Identities=24% Similarity=0.316 Sum_probs=55.4
Q ss_pred CCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC---ceeeCCCCCCchHHHHHHhhhcC--CccEE
Q 047713 145 GQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV---TEFVNPKDYDKPVQQVIADMTNG--GVDRS 218 (329)
Q Consensus 145 g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~--~~d~V 218 (329)
|-+|||+| +++||++.++-...+|- +|+.+.+++++++.++..-. +.+.|..+.+ .....+.++... ..+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~-~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRD-SRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchh-hHHHHHHHHHhhCCchhee
Confidence 78999996 59999999998889997 89999999999998876443 3455544432 122222223333 58999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
++++|.
T Consensus 83 iNNAGI 88 (245)
T COG3967 83 INNAGI 88 (245)
T ss_pred eecccc
Confidence 988874
No 159
>PRK12742 oxidoreductase; Provisional
Probab=96.90 E-value=0.024 Score=48.23 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=47.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE-AKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
+++++||+|+ |.+|.++++.+...|+ +|+.+.. ++++.+. ..+++...+ .|..+. ..+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHH--hCCCcEEE
Confidence 3789999986 9999999999988998 6665543 4444433 344554332 232221 122233322 13699999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
No 160
>PRK06182 short chain dehydrogenase; Validated
Probab=96.90 E-value=0.0068 Score=53.01 Aligned_cols=79 Identities=16% Similarity=0.334 Sum_probs=54.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhh--cCCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMT--NGGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~--~~~~d~Vi 219 (329)
++++++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+...+...+ .|..+. +++.+.+++.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDE-ASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCH-HHHHHHHHHHHHhcCCCCEEE
Confidence 3678999987 9999999999888898 88988888877765554444322 233332 12434444332 23799999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99873
No 161
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0066 Score=53.13 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=53.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEEEEe
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRSVEC 221 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~Vid~ 221 (329)
+++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+...+...+ .|..+. .++.+.+..... +++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDG-AALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCH-HHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899987 9999999999988898 88888888877776665554332 343332 124444444322 379999999
Q ss_pred cC
Q 047713 222 TG 223 (329)
Q Consensus 222 ~g 223 (329)
.|
T Consensus 80 ag 81 (274)
T PRK05693 80 AG 81 (274)
T ss_pred CC
Confidence 98
No 162
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.86 E-value=0.0017 Score=54.41 Aligned_cols=103 Identities=21% Similarity=0.249 Sum_probs=66.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHH----HhcCCceee-CCCCCCchHHHHHHh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEA----KKFGVTEFV-NPKDYDKPVQQVIAD 209 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~----~~lg~~~~~-~~~~~~~~~~~~~~~ 209 (329)
+.+.+.+++|++||-+|+|. |..++-+++..|.. .|++++..++-.+.+ +.++.+.+. ...+. ..-
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-------~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-------SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-------GGT
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-------hhc
Confidence 56778899999999998863 88888888877743 699999988755443 445654322 11111 111
Q ss_pred hhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 210 MTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 210 ~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
... +.||.|+-+.+.+..-...++.|+++ |+++..-.
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~ 173 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIG 173 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEES
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEc
Confidence 112 37999998877665556788899998 99988543
No 163
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.83 E-value=0.005 Score=53.86 Aligned_cols=102 Identities=25% Similarity=0.296 Sum_probs=62.2
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
+.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.+++..+.++ +.|....+...-.+ + +++.
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~~ 125 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDLP 125 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG--
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----cccC
Confidence 5788899999999999987 47778888888899 8999999999887664 45543211111111 1 2221
Q ss_pred cCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEecc
Q 047713 212 NGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 212 ~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.+|.|+ +.+|. +..+..+-+.|+|+ |+++.-..
T Consensus 126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 2688875 44542 34578888899998 99875543
No 164
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.81 E-value=0.017 Score=52.76 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=64.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---C-ceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG---V-TEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg---~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.+|||+|+|.+|+.+++.+...+...|..++++.++.+.+.... . ...+|..+. +.+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~-----~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV-----DALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh-----HHHHHHHh-cCCEEEEe
Confidence 47899999999999999887777458999999999998887664 2 234444332 12333322 35999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.+........-.|++.+ =.++....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSY 100 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEccc
Confidence 97655554444455554 45665554
No 165
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.81 E-value=0.015 Score=47.35 Aligned_cols=94 Identities=21% Similarity=0.311 Sum_probs=61.9
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC--
Q 047713 148 VAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS-- 224 (329)
Q Consensus 148 VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~-- 224 (329)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..+.+.+. ..-.+ . ..+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~~d--~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDLFD--P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence 689997 9999999999999997 89999999988776 34444332 11122 2 23333332 69999999973
Q ss_pred --HHHHHHHHHhhccC-CeEEEEeccCC
Q 047713 225 --VQAMISAFECVHDG-WGVAVLVGVPN 249 (329)
Q Consensus 225 --~~~~~~~~~~l~~~-~G~vv~~g~~~ 249 (329)
.......++.++.. -.+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23345555555443 13777776543
No 166
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.76 E-value=0.023 Score=47.71 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=71.9
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCC-CCchHHHHHHhhh
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKD-YDKPVQQVIADMT 211 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~-~~~~~~~~~~~~~ 211 (329)
..++....++||-+|.+ +|..++++|..+. -.++++++.++++.+.+++ .|....+.... .+ ..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence 34556678889988764 5888899998776 3389999999999887754 56554322222 22 555555533
Q ss_pred cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713 212 NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 212 ~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+.||+||--.. .+..++.++++|+++ |.++.=
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 458999973332 456789999999997 776643
No 167
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.72 E-value=0.02 Score=48.57 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=73.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+....++.+|++|+-.|.|+ |.+++.||+..|. .+|++.+..++..+.+++ +|....+.....| +++.
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D------v~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD------VREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc------cccc
Confidence 45678999999999887663 8888999987765 599999999988877654 3433322222211 2222
Q ss_pred hcC-CccEEE-EecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 211 TNG-GVDRSV-ECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 211 ~~~-~~d~Vi-d~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
..+ .+|.|| |---..+.++.+.+.|.++ |.++.+..
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 223 789875 5544567889999999998 99988854
No 168
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.69 E-value=0.0043 Score=52.27 Aligned_cols=103 Identities=22% Similarity=0.265 Sum_probs=67.5
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.+...+++|++||-.|+|. |..++.+++..+. .+|++++.+++..+.+++ +|...+. ....+ .. ...
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~-~~~gd--~~---~~~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVE-VIVGD--GT---LGY 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--cc---cCC
Confidence 45667889999999998864 7777888887653 389999999987776654 3432211 11111 10 001
Q ss_pred hc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 211 TN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 211 ~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
.. +.||+|+-........+..++.|+++ |+++..-
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~~ 176 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIPV 176 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEEE
Confidence 12 37999876554555667788899998 9987753
No 169
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.67 E-value=0.011 Score=44.67 Aligned_cols=104 Identities=20% Similarity=0.309 Sum_probs=66.7
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
.....+.++++|+-.|+|. |..+..+++..+..+|++++.++...+.+++ ++...+.... .+ ....+. ...
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~ 86 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-GD--APEALE-DSL 86 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-cc--ccccCh-hhc
Confidence 3445667788899999876 8888899988754589999999987776543 4432211100 11 110011 112
Q ss_pred CCccEEEEecCC---HHHHHHHHHhhccCCeEEEEec
Q 047713 213 GGVDRSVECTGS---VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 213 ~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+.+|+|+-..+. .+.++.+.+.|+++ |.++...
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 379999865432 34678888999998 9987653
No 170
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.67 E-value=0.013 Score=48.99 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=65.8
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.+...++++++||-.|+|. |..++.+++..+ ..+|++++.+++..+.+++ ++....+.....+ ..+.+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d--~~~~~~-- 138 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD--GKRGLE-- 138 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC--cccCCc--
Confidence 34566788999999998864 777777777664 2389999999887665543 4432111111111 111111
Q ss_pred hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713 211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
..+.+|+|+-+.......+...+.|+++ |+++..
T Consensus 139 ~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999986655555556778899998 998764
No 171
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.67 E-value=0.0065 Score=49.12 Aligned_cols=100 Identities=21% Similarity=0.238 Sum_probs=62.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC-CCC--------------CchHHHHHHh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP-KDY--------------DKPVQQVIAD 209 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~-~~~--------------~~~~~~~~~~ 209 (329)
.-+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+.++...+... .+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4688999999999999999999999 89999999998888888877544331 110 0112222222
Q ss_pred hhcCCccEEEEecC-----CHHH-HHHHHHhhccCCeEEEEecc
Q 047713 210 MTNGGVDRSVECTG-----SVQA-MISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 210 ~~~~~~d~Vid~~g-----~~~~-~~~~~~~l~~~~G~vv~~g~ 247 (329)
... .+|+||.+.= .+.. .+..++.++++ ..++.+..
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~ 140 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISC 140 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEe
Confidence 211 3688874321 1111 24556678876 77887764
No 172
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.65 E-value=0.0078 Score=44.78 Aligned_cols=95 Identities=21% Similarity=0.267 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHhcC----CceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARV-SGASRIIGVDLNPSRFNEAKKFG----VTEFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~-~G~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
||.+||-.|+|. |..++.+++. .+. +|++++.+++..+.+++.- ...-+.....+ + .......+++|+|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~--~~~~~~~~~~D~v 74 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A--EFDPDFLEPFDLV 74 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C--HGGTTTSSCEEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c--ccCcccCCCCCEE
Confidence 688999998874 8888888884 666 8999999999888776532 21111111112 2 1111112379999
Q ss_pred EEec-CC---H------HHHHHHHHhhccCCeEEEEe
Q 047713 219 VECT-GS---V------QAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 219 id~~-g~---~------~~~~~~~~~l~~~~G~vv~~ 245 (329)
+... .. . ..++...+.|+++ |+++.-
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 75 ICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 8765 21 1 2377888899998 988753
No 173
>PRK04148 hypothetical protein; Provisional
Probab=96.64 E-value=0.063 Score=41.31 Aligned_cols=87 Identities=18% Similarity=0.232 Sum_probs=61.1
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC-CCCCchHHHHHHhhhcCCccEEEE
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP-KDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
..++.++++.|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+. .+.+..+ -+++|+|+.
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liys 83 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYS 83 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEE
Confidence 3456789999999 88756666667898 99999999999999998887554432 2222011 126899998
Q ss_pred ecCCHHHHHHHHHhhccC
Q 047713 221 CTGSVQAMISAFECVHDG 238 (329)
Q Consensus 221 ~~g~~~~~~~~~~~l~~~ 238 (329)
.-..++..+..+++.+.-
T Consensus 84 irpp~el~~~~~~la~~~ 101 (134)
T PRK04148 84 IRPPRDLQPFILELAKKI 101 (134)
T ss_pred eCCCHHHHHHHHHHHHHc
Confidence 887766666666655543
No 174
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.64 E-value=0.03 Score=52.92 Aligned_cols=78 Identities=23% Similarity=0.371 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhH-HHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRF-NEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~-~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
+++++||+|+ |.+|.++++.+...|+ +|+.++.++ ++. +..++++... .+|..+.+ +..+.+..... +++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence 5789999986 9999999999988999 787776643 222 2334455432 23433322 23333333322 3699
Q ss_pred EEEEecC
Q 047713 217 RSVECTG 223 (329)
Q Consensus 217 ~Vid~~g 223 (329)
++|++.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999988
No 175
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.63 E-value=0.042 Score=45.23 Aligned_cols=100 Identities=25% Similarity=0.249 Sum_probs=61.2
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcC-Cc
Q 047713 139 VAKPKKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNG-GV 215 (329)
Q Consensus 139 ~~~~~~g~~VlI~Gag~iG~aai~la~-~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 215 (329)
...+++|++||..|+|+-+. +..+++ ..+..+|++++.++.. +..+...+ .+..+.+ ....+.+..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~--~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEE--VLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChh--HHHHHHHHhCCCCc
Confidence 34568999999999876454 444444 3344489999998754 11233221 1222221 33445554545 89
Q ss_pred cEEEE-e----cCC------------HHHHHHHHHhhccCCeEEEEec
Q 047713 216 DRSVE-C----TGS------------VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 216 d~Vid-~----~g~------------~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+|+. . .|. ...+..+.++|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99994 2 221 34677888899998 9988753
No 176
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.62 E-value=0.035 Score=48.46 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=68.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-ee----CCCCCCchHHHHHHhhh--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-FV----NPKDYDKPVQQVIADMT-- 211 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~~----~~~~~~~~~~~~~~~~~-- 211 (329)
.|+.|+|+|| ++||.+++.-+...|+ +++.+.+..++++.+ ++++... ++ |..+. ++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~-~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDE-ESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCH-HHHHHHHHHHHHh
Confidence 4789999997 9999998888888899 566665667666554 4444433 21 22222 22444443332
Q ss_pred cCCccEEEEecCCHH-------------------------HHHHHHHhhccCC-eEEEEeccCCCCCccc
Q 047713 212 NGGVDRSVECTGSVQ-------------------------AMISAFECVHDGW-GVAVLVGVPNKDDAFK 255 (329)
Q Consensus 212 ~~~~d~Vid~~g~~~-------------------------~~~~~~~~l~~~~-G~vv~~g~~~~~~~~~ 255 (329)
-|++|+.++..|... ....++..++..+ |+|+.++...+....+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 247999999887421 2334455555443 8999998655544333
No 177
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.042 Score=46.74 Aligned_cols=79 Identities=23% Similarity=0.328 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceee--CCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV---TEFV--NPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~---~~~~--~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.+.+++|+|+ |.+|..+++.+...|+ +|+++.+++++.+.+ +++.. ...+ |..+. .++.+.++++.. ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 3688999987 9999999998888898 788888877665433 33321 1111 22221 123444444322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998763
No 178
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.59 E-value=0.007 Score=52.61 Aligned_cols=110 Identities=23% Similarity=0.281 Sum_probs=74.7
Q ss_pred hhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHH
Q 047713 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVI 207 (329)
Q Consensus 132 a~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~ 207 (329)
.+..+..++++++|.+||=+|+|- |.+++..|+..|+ +|++++.|++..+.+++ .|...-+...-. ..
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~------d~ 131 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ------DY 131 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec------cc
Confidence 444467889999999999999875 7788888998898 99999999998776654 454311100000 01
Q ss_pred HhhhcCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 208 ADMTNGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 208 ~~~~~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
++.. +.||-|+ +.+|. +..+..+-++|+++ |++.+.......
T Consensus 132 rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 132 RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 1111 2377663 55553 45678888899998 998887765444
No 179
>PRK08017 oxidoreductase; Provisional
Probab=96.57 E-value=0.017 Score=49.81 Aligned_cols=76 Identities=22% Similarity=0.358 Sum_probs=52.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHH---HHHhhhcCCccEEEE
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQ---VIADMTNGGVDRSVE 220 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~---~~~~~~~~~~d~Vid 220 (329)
+++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+++.+...+. |..+.+ ...+ .+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPE-SVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHH-HHHHHHHHHHHhcCCCCeEEEE
Confidence 57999987 9999999999998898 889898888888777777754332 332211 1222 222223346888888
Q ss_pred ecC
Q 047713 221 CTG 223 (329)
Q Consensus 221 ~~g 223 (329)
+.|
T Consensus 81 ~ag 83 (256)
T PRK08017 81 NAG 83 (256)
T ss_pred CCC
Confidence 876
No 180
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.021 Score=49.32 Aligned_cols=79 Identities=25% Similarity=0.344 Sum_probs=51.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V 218 (329)
+|++|+|+|+ |.+|.++++.+...|+ +|+.+++++.+.+.. ++++... ..|..+.+ ++.+.+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4789999987 9999999999988998 788888877665443 4454322 22333221 23333333322 368999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998873
No 181
>PRK14967 putative methyltransferase; Provisional
Probab=96.45 E-value=0.18 Score=42.70 Aligned_cols=98 Identities=22% Similarity=0.184 Sum_probs=62.1
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++ .+....+.. .+ +... ...+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence 334567889999999986 8888888875 55589999999987776544 333211111 11 2221 1223
Q ss_pred CccEEEEecCC---------------------------HHHHHHHHHhhccCCeEEEEe
Q 047713 214 GVDRSVECTGS---------------------------VQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 214 ~~d~Vid~~g~---------------------------~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+|+|+...+. ...+..+.+.|+++ |+++.+
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 79999854210 12345677888998 988765
No 182
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.017 Score=52.16 Aligned_cols=78 Identities=24% Similarity=0.388 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~ 213 (329)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++.+. +++.|.... .|..+.+ +..+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD-QVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHhcC
Confidence 4689999987 9999999999999999 78888888877653 334454322 2333221 2333332221 24
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|++.|
T Consensus 84 ~iD~lVnnAG 93 (330)
T PRK06139 84 RIDVWVNNVG 93 (330)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 183
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.42 E-value=0.042 Score=43.71 Aligned_cols=94 Identities=24% Similarity=0.354 Sum_probs=60.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... .. +.+.+ ...|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-------~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-------LEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-------HHHHH-----hhCCEEEEC
Confidence 3468999999999999999999999999 9999999998776665555432 11 22221 247999999
Q ss_pred cCCHHHH-HHHHHhhccCCeEEEEeccCCC
Q 047713 222 TGSVQAM-ISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 222 ~g~~~~~-~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+|..+.+ ..-++.++++ ..+..+|..+.
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcCce
Confidence 9875543 4667778886 66665665333
No 184
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.34 E-value=0.032 Score=45.54 Aligned_cols=88 Identities=27% Similarity=0.387 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
-.|.+|.|+|.|.||+.+++.++.+|. +|++.+++....+.....+.... + +.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~~----~----l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEYV----S----LDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEES----S----HHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccceee----e----hhhhcch-----hhhhhhhh
Confidence 358999999999999999999999999 99999988877664555554211 1 3333333 58887776
Q ss_pred CCHH----H-HHHHHHhhccCCeEEEEe
Q 047713 223 GSVQ----A-MISAFECVHDGWGVAVLV 245 (329)
Q Consensus 223 g~~~----~-~~~~~~~l~~~~G~vv~~ 245 (329)
...+ . -...+..++++ ..++-+
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~ 126 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNV 126 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEES
T ss_pred ccccccceeeeeeeeeccccc-eEEEec
Confidence 5211 1 13445556665 555444
No 185
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.026 Score=48.75 Aligned_cols=79 Identities=20% Similarity=0.343 Sum_probs=51.7
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-e--eeCCCCCCchHHHHHHhhh--c
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-E--FVNPKDYDKPVQQVIADMT--N 212 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~--~~~~~~~~~~~~~~~~~~~--~ 212 (329)
..+++++|+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+.+ .+.. . ..|..+. +++.+.++++. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhc
Confidence 34789999986 9999999999988999 78888888877544322 1211 1 1222221 22444444332 2
Q ss_pred CCccEEEEecC
Q 047713 213 GGVDRSVECTG 223 (329)
Q Consensus 213 ~~~d~Vid~~g 223 (329)
+.+|++|++.|
T Consensus 85 ~~~d~li~~ag 95 (258)
T PRK06949 85 GTIDILVNNSG 95 (258)
T ss_pred CCCCEEEECCC
Confidence 37899999987
No 186
>PRK00536 speE spermidine synthase; Provisional
Probab=96.32 E-value=0.017 Score=50.01 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC-ceeeCCCCCCchHHHHHHhhhcCCccEEE-
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GV-TEFVNPKDYDKPVQQVIADMTNGGVDRSV- 219 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi- 219 (329)
.+.++|||.|+|- |.++-.++|+-. +|+.++.+++-.+.++++ .. ...++...-. +...+.+...+.+|+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~--l~~~~~~~~~~~fDVIIv 145 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFT--HAKQLLDLDIKKYDLIIC 145 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEE--EeehhhhccCCcCCEEEE
Confidence 4468999997754 566778888752 899999999999998883 21 1111111111 11123333334799975
Q ss_pred EecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 220 ECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 220 d~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
|+.-.++..+.+.++|+++ |.++.-+.
T Consensus 146 Ds~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 146 LQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred cCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 6565667788899999998 98887654
No 187
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.026 Score=47.95 Aligned_cols=79 Identities=22% Similarity=0.301 Sum_probs=49.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHh---cCCcee-eCCCCCCchHHHHHHhhhc--CCc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKK---FGVTEF-VNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~---lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.. .+++ .+...+ .|..+. .++.+.+.+... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence 3789999987 9999999998888899 7888888665432 2222 222221 222221 123333333322 379
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+||.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
No 188
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.032 Score=47.24 Aligned_cols=77 Identities=13% Similarity=0.171 Sum_probs=51.3
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
++++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+++++... ..|..+. ++..+.++.+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence 47899986 9999999998888898 8998888877665555543222 2233222 1233444444334799999887
Q ss_pred CC
Q 047713 223 GS 224 (329)
Q Consensus 223 g~ 224 (329)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 189
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.29 E-value=0.044 Score=48.12 Aligned_cols=98 Identities=29% Similarity=0.414 Sum_probs=59.4
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR 217 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 217 (329)
+++|.+||=.|+|+ |.++|..++ +|+++|++++.++-..+.+++ .+.+...... ..........+.+|+
T Consensus 160 ~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~Dv 232 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAK-----GFLLLEVPENGPFDV 232 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcc-----cccchhhcccCcccE
Confidence 56899999988753 666666555 678799999999876655443 3333200000 001112222247999
Q ss_pred EEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713 218 SVECTGSV---QAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 218 Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
|+-..=.. ...+....+++++ |.+++.|.
T Consensus 233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGI 264 (300)
T COG2264 233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGI 264 (300)
T ss_pred EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEee
Confidence 98554221 2345566678887 99988875
No 190
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.083 Score=45.26 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=58.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ |.+|..++..+...|. +|+.+.++. ++.+. ++..+... ..|..+. ++..+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE-ESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhC
Confidence 3679999987 9999999998888898 777776653 22222 22223221 1233322 123333333322
Q ss_pred CCccEEEEecCCH-------------------HHHHHHHHhhccCCeEEEEecc
Q 047713 213 GGVDRSVECTGSV-------------------QAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 213 ~~~d~Vid~~g~~-------------------~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+++|+++.+.|.. ..++.+...+... |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689988877642 1334444444555 78888764
No 191
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.022 Score=50.49 Aligned_cols=79 Identities=24% Similarity=0.400 Sum_probs=53.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--cee---eCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--TEF---VNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~~~---~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .++++. ... .|..+.+ +..+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 4789999986 9999999999999999 78888888777654 444542 111 3333321 23333333322 37
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 192
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.27 E-value=0.063 Score=51.60 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=38.1
Q ss_pred hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 047713 138 NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~ 184 (329)
...+.+.|++|||+|+ |.+|..++..+...|. +|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 3456678999999987 9999999998888898 78888888777654
No 193
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.028 Score=48.85 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc-ee--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-K---FGVT-EF--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~---lg~~-~~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+. + .+.. .. .|..+.+ +..+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999987 9999999998888999 8888888876654322 2 2322 11 2333221 23333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|+++|
T Consensus 87 ~id~vi~~Ag 96 (263)
T PRK07814 87 RLDIVVNNVG 96 (263)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 194
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.27 E-value=0.028 Score=48.77 Aligned_cols=78 Identities=21% Similarity=0.280 Sum_probs=51.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVTE---FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~~---~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++++++|+|+ |++|.++++.+...|+ +|+.+++++++.+.+++. +... ..|..+. .+..+.+++... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence 4789999986 9999999998888999 788888877766555442 3211 1232221 123333444332 3689
Q ss_pred EEEEecC
Q 047713 217 RSVECTG 223 (329)
Q Consensus 217 ~Vid~~g 223 (329)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 195
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.044 Score=46.82 Aligned_cols=77 Identities=25% Similarity=0.441 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
++.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+.+ ...+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA-AIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH-HHHHHHHH--hCCCCEEEE
Confidence 4689999987 9999999999999998 788888887766544 33444322 2333211 12222222 236899999
Q ss_pred ecCC
Q 047713 221 CTGS 224 (329)
Q Consensus 221 ~~g~ 224 (329)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 196
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.22 E-value=0.034 Score=48.24 Aligned_cols=79 Identities=23% Similarity=0.330 Sum_probs=51.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-ee--eCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT-EF--VNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~-~~--~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
+++++||+|+ +.+|.++++.+...|+ +|+.+++++++.+.+. +++.. .. .|..+. .+....+.+... +.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSY-ADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHhcCCCC
Confidence 4789999986 9999999998888999 7888888877766543 33321 11 222221 123334443322 3699
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 197
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.041 Score=46.45 Aligned_cols=77 Identities=18% Similarity=0.288 Sum_probs=51.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 46899986 9999999998877898 7888888877776666655432 22333322 2333333333337999998877
Q ss_pred C
Q 047713 224 S 224 (329)
Q Consensus 224 ~ 224 (329)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
No 198
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.21 E-value=0.013 Score=49.45 Aligned_cols=104 Identities=19% Similarity=0.237 Sum_probs=65.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.+...++++++||-.|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+.+... ..+ ......
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~-~~d--~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVI-VGD--GTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEE-ECC--cccCCc--
Confidence 45566789999999998764 7777778876553 269999999887766543 443221100 111 111000
Q ss_pred hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713 211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
..+.||+|+-........+...+.|+++ |+++..-
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~~ 177 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMPV 177 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEEE
Confidence 1137999875443445566778899998 9987653
No 199
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.21 E-value=0.035 Score=48.00 Aligned_cols=80 Identities=19% Similarity=0.294 Sum_probs=55.0
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC----Cce-ee--CCCCCCchHHHHHHhhhcC
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG----VTE-FV--NPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg----~~~-~~--~~~~~~~~~~~~~~~~~~~ 213 (329)
..+.++||+|+ ++||...+..+...|. +++.+.+++++++.+ +++. ... ++ |..+.+ +......++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~-~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE-ALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh-HHHHHHHHHHhc
Confidence 45789999997 9999999999999999 899999999988754 3332 211 22 333322 233333333332
Q ss_pred --CccEEEEecCC
Q 047713 214 --GVDRSVECTGS 224 (329)
Q Consensus 214 --~~d~Vid~~g~ 224 (329)
.+|+.++++|.
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 79999999984
No 200
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.21 E-value=0.022 Score=47.04 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=58.3
Q ss_pred CCeEEEEc-C-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eeeCCCCCC--chHHHHHHhhhcCCccEE
Q 047713 145 GQSVAIFG-L-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT-EFVNPKDYD--KPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 145 g~~VlI~G-a-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~-~~~~~~~~~--~~~~~~~~~~~~~~~d~V 218 (329)
.+.|||+| + |+||.+.+.-....|+ .|+++.++-+..+.+. ++|.. .-+|..+++ ..+..++++...|+.|+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 56789996 4 9999999988888999 9999999888877665 67753 233333222 235667777777799999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
++..|.
T Consensus 86 ~NNAG~ 91 (289)
T KOG1209|consen 86 YNNAGQ 91 (289)
T ss_pred EcCCCC
Confidence 998774
No 201
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.04 Score=48.10 Aligned_cols=78 Identities=28% Similarity=0.367 Sum_probs=51.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG-VTE-FVNPKDYDKPVQQVIADMTN--GGVDRS 218 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg-~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V 218 (329)
+.++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ ++++ ... ..|..+.+ ++.+.+.+... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 678999987 9999999998888899 788888887776543 4444 221 22333321 23333333322 479999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
|++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 202
>PLN02476 O-methyltransferase
Probab=96.17 E-value=0.038 Score=48.25 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=67.2
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT- 211 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~- 211 (329)
...+..+.++||-+|.+ +|..++.+|+.++ -.++++++.+++..+.++ +.|...-+.....+ ..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 34556678899999864 4777778887664 227999999998877764 45654333332333 444454432
Q ss_pred ---cCCccEEEEecCC---HHHHHHHHHhhccCCeEEEE
Q 047713 212 ---NGGVDRSVECTGS---VQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 212 ---~~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+.||.||--... ...++.++++|+++ |.++.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~ 226 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM 226 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence 2379998744333 34578889999997 87664
No 203
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.16 E-value=0.042 Score=52.43 Aligned_cols=74 Identities=24% Similarity=0.245 Sum_probs=53.6
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
.+.+|++|+|.|.|.+|++++.+++..|+ .|++.+..+.+.+.++++|+... .... ....+ ..+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEE
Confidence 35578999999999999999999999998 88889877666666777777432 2111 11112 13789998
Q ss_pred ecCCH
Q 047713 221 CTGSV 225 (329)
Q Consensus 221 ~~g~~ 225 (329)
+.|.+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88854
No 204
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.082 Score=47.83 Aligned_cols=79 Identities=22% Similarity=0.244 Sum_probs=51.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.+++|+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+.+ +..+.+.+... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4678999986 9999999999888998 788888887765432 33454322 2333221 23333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 205
>PRK00811 spermidine synthase; Provisional
Probab=96.16 E-value=0.041 Score=48.53 Aligned_cols=99 Identities=17% Similarity=0.172 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--------TEFVNPKDYDKPVQQVIADMTNGG 214 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (329)
.+.++||++|+|. |..+..+++..+.++|++++.+++-.+.+++.=. +.-+.....+ ..+.++. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence 3467999998764 7777777887677799999999998888876311 1001011111 3344443 3347
Q ss_pred ccEEEEec----C------CHHHHHHHHHhhccCCeEEEEec
Q 047713 215 VDRSVECT----G------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 215 ~d~Vid~~----g------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+|+||--. + ..+.++.+.+.|+++ |.++...
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 99987432 1 123467788899998 9888653
No 206
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.033 Score=47.97 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+...++.... ..|..+. .++.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4789999987 9999999998888998 7888888776555554443211 1232221 123333333322 3689
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 207
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.13 E-value=0.12 Score=42.82 Aligned_cols=106 Identities=16% Similarity=0.279 Sum_probs=62.8
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
+.....++++++||=.|+|. |..++.+++.....+|++++.+++..+.+++ ++...+... ..+ ..+.+..+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~-~~d--~~~~~~~~~ 107 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVI-EGS--APECLAQLA 107 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEE-ECc--hHHHHhhCC
Confidence 44556778899988887643 5556666665433389999999988776653 454321111 111 222222221
Q ss_pred cCCccE-EEEecCC-HHHHHHHHHhhccCCeEEEEecc
Q 047713 212 NGGVDR-SVECTGS-VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 212 ~~~~d~-Vid~~g~-~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
..+|. +++.... ...++.+.+.|+++ |+++....
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22344 4443222 36678888899998 99887753
No 208
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.04 Score=47.80 Aligned_cols=81 Identities=25% Similarity=0.348 Sum_probs=51.8
Q ss_pred CCCCCeEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCcee----eCCCCCCchHHHHHHhh
Q 047713 142 PKKGQSVAIFGL-G-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----K-FGVTEF----VNPKDYDKPVQQVIADM 210 (329)
Q Consensus 142 ~~~g~~VlI~Ga-g-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~-lg~~~~----~~~~~~~~~~~~~~~~~ 210 (329)
+.+++++||+|+ | ++|.++++.+...|+ +|+.+++++++.+... + ++...+ .|..+. ++..+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSE-AQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCH-HHHHHHHHHH
Confidence 345789999986 6 799999999999999 7888887776554332 2 343222 233222 1233333332
Q ss_pred h--cCCccEEEEecCC
Q 047713 211 T--NGGVDRSVECTGS 224 (329)
Q Consensus 211 ~--~~~~d~Vid~~g~ 224 (329)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 2 1479999999984
No 209
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.10 E-value=0.042 Score=47.41 Aligned_cols=79 Identities=24% Similarity=0.235 Sum_probs=48.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V 218 (329)
.+.+++|+|+ |.+|.++++.+...|+ +|+.+.. +++..+.+++.+... ..|..+. ++..+.+.+... +++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNR-DQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence 3689999986 9999999998888898 6665543 444444444433322 2233322 123344444322 369999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 210
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.035 Score=48.05 Aligned_cols=81 Identities=25% Similarity=0.341 Sum_probs=52.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc----eeeCCCCCCchHHHHHHhhhc--C
Q 047713 142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVT----EFVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~----~~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.-++.++||+|+ |.+|..++..+...|+ +|+.+.++++..+.+.+ +.-. ...|..+.. .+...+.+... +
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERFG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 346789999987 9999999999988999 78888887766554433 2211 122332221 22233333221 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+||.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 211
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.07 E-value=0.032 Score=51.84 Aligned_cols=76 Identities=11% Similarity=0.112 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
-.+.+|+|.|+|.+|.+++..+...|++.++.+.++.++.+ ++++++...++. + +.+.+.. ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence 45789999999999999999999999878888888877654 455565222221 2 1222221 248999999
Q ss_pred cCCHHH
Q 047713 222 TGSVQA 227 (329)
Q Consensus 222 ~g~~~~ 227 (329)
++++..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 987654
No 212
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.044 Score=48.04 Aligned_cols=78 Identities=23% Similarity=0.371 Sum_probs=51.6
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
+.++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+..... ..|..+.+ ...+.+++... +++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCCE
Confidence 578999986 9999999998888898 7989988887766554432211 12332221 23333333322 36899
Q ss_pred EEEecCC
Q 047713 218 SVECTGS 224 (329)
Q Consensus 218 Vid~~g~ 224 (329)
++++.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999875
No 213
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.041 Score=47.44 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.|+++||+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ ++ .+... ..|..+. ++..+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH-QQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4789999987 9999999999988999 788888877665433 22 23211 1233222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 214
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.052 Score=47.22 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc---eeeCCCCCCchHHHHHHhhh-cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVT---EFVNPKDYDKPVQQVIADMT-NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~---~~~~~~~~~~~~~~~~~~~~-~~ 213 (329)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++ +.. ...|..+. ++....+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKR-EDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHHHhhC
Confidence 4789999986 9999999999999999 7888888877654432 22 221 12233332 12333333332 24
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 215
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.03 E-value=0.055 Score=48.66 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc----eeeCCCCCCchHHHHHHhhhcC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVT----EFVNPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~----~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
.|++++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ +++ +.. ..+|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5899999987 9999999998888899 788888888876543 222 111 1223332111234445554444
Q ss_pred -CccEEEEecCC
Q 047713 214 -GVDRSVECTGS 224 (329)
Q Consensus 214 -~~d~Vid~~g~ 224 (329)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 67799998873
No 216
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.12 Score=44.14 Aligned_cols=79 Identities=24% Similarity=0.252 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+.. ++.+... ..|..+.+ +..+.+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999987 9999999999888998 788887777654432 2223221 12332211 22233332222 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 217
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.99 E-value=0.041 Score=45.74 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=61.4
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh-
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT- 211 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~- 211 (329)
.+.....++.+||-.|+|. |..++.+|+. |. +|++++.+++..+.+++. +...+ .....+ + .+..
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~ 92 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTF 92 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCc
Confidence 3344556678999998864 7778888875 76 899999999877766543 22111 110011 1 1111
Q ss_pred cCCccEEEEecC----C----HHHHHHHHHhhccCCeEEEEec
Q 047713 212 NGGVDRSVECTG----S----VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 212 ~~~~d~Vid~~g----~----~~~~~~~~~~l~~~~G~vv~~g 246 (329)
.+.+|+|+.... . ...+....+.|+++ |.++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 236999986532 1 24466777789998 9865543
No 218
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.99 E-value=0.059 Score=46.20 Aligned_cols=79 Identities=19% Similarity=0.329 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
.|+++||+|+ |.+|.+++..+...|+ .|+.+++++. ..+.+++++... ..|..+. +++...+++... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI-EAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence 4789999987 9999999998888999 7888877542 223344444321 1233222 224444443322 369
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 219
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.97 E-value=0.084 Score=44.99 Aligned_cols=106 Identities=20% Similarity=0.279 Sum_probs=74.1
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHh--
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIAD-- 209 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~-- 209 (329)
+.....+.+|++||=.|+| +|-.++.+++..|...|++++.++..++.+++- +... +..-..+ ..+
T Consensus 43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d------Ae~LP 114 (238)
T COG2226 43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD------AENLP 114 (238)
T ss_pred HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec------hhhCC
Confidence 4455566689999988765 599999999998866999999999988876652 2221 1111111 111
Q ss_pred hhcCCccEEEEecCC------HHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 210 MTNGGVDRSVECTGS------VQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 210 ~~~~~~d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
..+..||+|.-+.|- +..+....+.|+|+ |+++.+.....
T Consensus 115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 222379999877763 45688889999998 99998876544
No 220
>PLN02366 spermidine synthase
Probab=95.97 E-value=0.1 Score=46.47 Aligned_cols=102 Identities=18% Similarity=0.134 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc-eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVT-EFVNPKDY---DKPVQQVIADMTNGGVDR 217 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~-~~~~~~~~---~~~~~~~~~~~~~~~~d~ 217 (329)
.+.++||+.|+|. |..+..++++-+..+|++++.+++-.+.++++ ... ..++...- ..+....+++...+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4578999998765 66677888877666899999999888887773 210 00100000 012434444433447999
Q ss_pred EEEecCC----------HHHHHHHHHhhccCCeEEEEec
Q 047713 218 SVECTGS----------VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 218 Vid~~g~----------~~~~~~~~~~l~~~~G~vv~~g 246 (329)
||--... .+.++.+.++|+++ |.++.-.
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8742211 24577888999998 9987654
No 221
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.97 E-value=0.036 Score=45.58 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR 217 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 217 (329)
++++.+||-.|+|. |..++.+++.....+|++++.+++..+.+++ .+.+. +.....+ ..+ +. . .+.+|+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCccE
Confidence 44588999888753 6666666665543499999999887766543 44432 1111111 211 11 1 237999
Q ss_pred EEEec-C-CHHHHHHHHHhhccCCeEEEEec
Q 047713 218 SVECT-G-SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 218 Vid~~-g-~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+-.. + ....+..+.+.|+++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 98532 1 235677888999998 9988774
No 222
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.96 E-value=0.02 Score=49.10 Aligned_cols=108 Identities=18% Similarity=0.197 Sum_probs=65.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHH-HHHh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQ-VIAD 209 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~-~~~~ 209 (329)
+...+++.||++|+-.|.|. |.++..+++..| ..+|++.+.++++.+.++ .+|....+.....+ ..+ ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 55678999999999987653 677777887665 338999999998887664 35553222111111 110 1111
Q ss_pred hhcCCccEEEEecC-CHHHHHHHHHhh-ccCCeEEEEecc
Q 047713 210 MTNGGVDRSVECTG-SVQAMISAFECV-HDGWGVAVLVGV 247 (329)
Q Consensus 210 ~~~~~~d~Vid~~g-~~~~~~~~~~~l-~~~~G~vv~~g~ 247 (329)
-....+|.||--.. ....++.+.+.| +++ |+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 11236898764443 445789999999 887 99999865
No 223
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.047 Score=47.13 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
++.++||+|+ |.+|..++..+...|+ +|+.+++++++.+..++ .+... ..|..+. ++..+.+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD-AQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCC
Confidence 3679999987 9999999998888898 67777777766544333 23221 1222221 123333333322 37
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 224
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.89 E-value=0.079 Score=45.31 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=66.2
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT- 211 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~- 211 (329)
...+..++++||-.|.| +|..++.+++.++ ..+|++++.+++..+.+++ .|....+.....+ ..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 34556678899998874 4777777777653 3499999999988777654 4543222222222 444444442
Q ss_pred ---cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713 212 ---NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 212 ---~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~ 244 (329)
.+.||+||--.. ....++.++++++++ |.++.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~ 176 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAF 176 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEE
Confidence 237999974432 245677888999997 87664
No 225
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.85 E-value=0.093 Score=43.80 Aligned_cols=34 Identities=32% Similarity=0.359 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 5789999999999999999999999889888876
No 226
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.84 E-value=0.043 Score=47.04 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG--VT---EFVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg--~~---~~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+ ..+. .. ...|..+. .++.+.+.+... +.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE-ADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence 3678999987 9999999998888899 788888887765443 3332 11 11222221 123333333321 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|+||.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 227
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.062 Score=46.28 Aligned_cols=73 Identities=16% Similarity=0.135 Sum_probs=48.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---eeCCCCCCchHHHHHHhhhcCCcc
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE---FVNPKDYDKPVQQVIADMTNGGVD 216 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d 216 (329)
+.++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ .+... ..|..+. ..+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence 468999987 9999999999999998 78888877765544332 23221 1232221 123333334799
Q ss_pred EEEEecC
Q 047713 217 RSVECTG 223 (329)
Q Consensus 217 ~Vid~~g 223 (329)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 228
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.072 Score=47.20 Aligned_cols=79 Identities=25% Similarity=0.400 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce-e--eCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE-F--VNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~-~--~~~~~~~~~~~~~~~~~~--~~ 213 (329)
.+.+++|+|+ |++|.+.++.+...|+ +|+.++++.++.+.+. +.+... . .|..+. +++.+.+++.. .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL-DAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 3578999986 9999999998888898 8888888877654432 223221 1 232222 12333333322 23
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 229
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.78 E-value=0.12 Score=43.00 Aligned_cols=81 Identities=28% Similarity=0.373 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
-.|.+++|+|.|.+|..+++.+...|+ +|++++.++++.+.+. .+++.. ++..+ +.....|+++-+
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----------l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----------IYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----------hccccCCEEEec
Confidence 357899999999999999999999999 8889998888766654 446432 22211 111147888866
Q ss_pred cCCHHHHHHHHHhhc
Q 047713 222 TGSVQAMISAFECVH 236 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~ 236 (329)
......-...++.++
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 543323334445554
No 230
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.056 Score=46.92 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCce----eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVTE----FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~~----~~~~~~~~~~~~~~~~~~~~- 212 (329)
.|+++||+|+ +.+|.++++.+...|+ +|+.+++++++.+.+. ++ +... ..|..+.+ +..+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4789999987 9999999999988999 7888888876654322 11 1111 12333321 23333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 369999999873
No 231
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.072 Score=45.69 Aligned_cols=79 Identities=25% Similarity=0.360 Sum_probs=49.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVT---EFVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +++ +.. ...|..+.. +..+.+.+... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 4678999987 9999999998888898 788888876554332 222 211 122332221 22222222221 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 232
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.083 Score=45.80 Aligned_cols=79 Identities=23% Similarity=0.367 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc--CCc-ee--eCCCCCCchHHHHHHhhh-cCCc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF--GVT-EF--VNPKDYDKPVQQVIADMT-NGGV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l--g~~-~~--~~~~~~~~~~~~~~~~~~-~~~~ 215 (329)
++.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+.+ ...+...... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEA-GREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHhcCCC
Confidence 4678999986 9999999998888998 7888888877665443 22 111 11 2222211 1222222221 2478
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
No 233
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.74 E-value=0.35 Score=40.39 Aligned_cols=93 Identities=18% Similarity=0.211 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
.|.+|||.|+|.+|...+..+...|+ +|++++.... ....+.+.|--..+ ..++. . .. + .++++||-+.
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~--~-~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFD--A-DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC--H-HH---h--CCcEEEEECC
Confidence 37899999999999999999999999 7888765432 22223333311111 12211 0 11 1 3689999999
Q ss_pred CCHHHHHHHHHhhccCCeEEEEecc
Q 047713 223 GSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 223 g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.++.-.......+.. |..+....
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 8754444555555555 76665543
No 234
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.73 E-value=0.053 Score=47.77 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
++.+++|+|+|+.+.+++.-+...|++++..+.++.+|.+. +++++... +.... ..+.+.+.. ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 57899999999999999999999998889999888877654 44443211 11110 001111111 258999999
Q ss_pred cCC
Q 047713 222 TGS 224 (329)
Q Consensus 222 ~g~ 224 (329)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 864
No 235
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.076 Score=45.46 Aligned_cols=79 Identities=19% Similarity=0.348 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++.+++|+|+ |.+|.++++.+...|+ +|+.+++++++.+. .++++.... .|..+.. +....+..... +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVA-AQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4679999987 9999999999998999 78888887765543 344554321 2222211 12222222222 3689
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 236
>PRK06196 oxidoreductase; Provisional
Probab=95.72 E-value=0.085 Score=47.22 Aligned_cols=79 Identities=19% Similarity=0.301 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG-VTE-FVNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg-~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
.+.++||+|+ |.+|.+++..+...|+ +|+.+.++.++.+.+ +++. ... ..|..+. .+..+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~-~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADL-ESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH-HHHHHHHHHHHhcCCCCCE
Confidence 4689999987 9999999998888898 788888877665432 3332 111 1233222 123333433332 37999
Q ss_pred EEEecCC
Q 047713 218 SVECTGS 224 (329)
Q Consensus 218 Vid~~g~ 224 (329)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 237
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.075 Score=46.11 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=52.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
+++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+. .++++... ..|..+. ++..+.+.+... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDD-AAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4689999986 9999999999888999 88888888765543 44454321 1233322 123333333322 3689
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998873
No 238
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.71 E-value=0.067 Score=50.81 Aligned_cols=78 Identities=23% Similarity=0.343 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHhcCCceeeCCCCCCch
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP---------------------SRFNEAKKFGVTEFVNPKDYDKP 202 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~ 202 (329)
.+++|+|+|+|+.|+.++..++..|. .|+.++..+ ...++++++|.+...+..-.. +
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-D 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-c
Confidence 68899999999999999999999999 677776543 245677888886655432211 0
Q ss_pred HHHHHHhhhcCCccEEEEecCCHH
Q 047713 203 VQQVIADMTNGGVDRSVECTGSVQ 226 (329)
Q Consensus 203 ~~~~~~~~~~~~~d~Vid~~g~~~ 226 (329)
. .+.++. .++|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 0 111111 25999999999743
No 239
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.075 Score=45.77 Aligned_cols=79 Identities=20% Similarity=0.290 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++.+.... .|..+. +...+.+++... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE-AYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHhcC
Confidence 3679999986 9999999998888999 788888877765433 22332221 232221 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 240
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.083 Score=45.66 Aligned_cols=78 Identities=19% Similarity=0.166 Sum_probs=49.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC----c-eeeCCCCCCchHHHHHHhhhc--CCc
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV----T-EFVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~----~-~~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
+.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.. +++.. . ...|..+. +++.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence 468999986 9999999998888899 788888887766543 32321 1 11233221 224444443322 258
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 241
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.70 E-value=0.077 Score=45.48 Aligned_cols=78 Identities=27% Similarity=0.387 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+++++||+|+ |.+|+.+++.+...|+ +|+.+++++++.+.. +..+... ..|..+. ....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE-EDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 4789999987 9999999999988898 788888877654432 3334321 2222221 123333343322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|.||.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 242
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.076 Score=45.76 Aligned_cols=79 Identities=23% Similarity=0.268 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc---CCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF---GVT---EFVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+. ++ +.. ...|..+. +++...+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHcC
Confidence 4689999986 9999999999889999 7888888776554332 22 221 12233221 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998874
No 243
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.70 E-value=0.077 Score=39.02 Aligned_cols=87 Identities=18% Similarity=0.234 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.|.+|||.|+|.+|..-++.+...|+ +|.+++... +..+ +.-... .++ + ++. -.++++||-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~----~~~-l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----F----EED-LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS---------GGG-CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----H----HHH-HhhheEEEecCC
Confidence 47899999999999999999999998 888887764 2222 111111 111 2 110 126899999997
Q ss_pred CHHHHHHHHHhhccCCeEEEEecc
Q 047713 224 SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.+..-+...+..+.. |.++....
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D 92 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVD 92 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT
T ss_pred CHHHHHHHHHHHhhC-CEEEEECC
Confidence 765555555556655 88877765
No 244
>PRK08589 short chain dehydrogenase; Validated
Probab=95.69 E-value=0.07 Score=46.64 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc---CCc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF---GVT---EFVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+++++||+|+ +++|.+++..+...|+ +|+.++++++..+.++++ +.. ...|..+.+ +....+.+... ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence 4789999986 9999999998888899 788887774333333332 321 122333221 23333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998873
No 245
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.69 E-value=0.08 Score=45.69 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.|++++|+|+ +++|.++++.+...|+ +|+.+.++++..+.++++.... ..|..+. ++..+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence 4789999986 4899999998888999 7888777654444444442211 1233222 123333333322 46
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 246
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.1 Score=45.16 Aligned_cols=81 Identities=25% Similarity=0.286 Sum_probs=49.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HH----HHHhcCC-c-e--eeCCCCCCchHHHHHHhh
Q 047713 142 PKKGQSVAIFGL-GAVGLAAAEGARVS-GASRIIGVDLNPSR-FN----EAKKFGV-T-E--FVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 142 ~~~g~~VlI~Ga-g~iG~aai~la~~~-G~~~vv~~~~~~~~-~~----~~~~lg~-~-~--~~~~~~~~~~~~~~~~~~ 210 (329)
+.++.+|||+|+ |++|.+.++-+... |+ +|+.+.+++++ .+ .+++.+. . . ..|..+.+ +..+.+++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence 456889999987 99999999876666 47 78888776654 32 2333332 1 1 22333322 233334433
Q ss_pred hc-CCccEEEEecCC
Q 047713 211 TN-GGVDRSVECTGS 224 (329)
Q Consensus 211 ~~-~~~d~Vid~~g~ 224 (329)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 32 479999887764
No 247
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.68 E-value=0.12 Score=41.64 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=53.1
Q ss_pred CCCCCeEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 142 PKKGQSVAIFGLGA-VGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 142 ~~~g~~VlI~Gag~-iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
--.|.+|+|.|+|. +|..++..+...|+ +|..+.++.+. ..+.+. .+|+||.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~---------------------l~~~l~-----~aDiVIs 93 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN---------------------LKEHTK-----QADIVIV 93 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------HHHHHh-----hCCEEEE
Confidence 35799999999986 59989999998998 67777654211 222222 3799999
Q ss_pred ecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 221 CTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+++.+..+.. +.++++ -.++.++.+
T Consensus 94 at~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 94 AVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred cCCCCceecH--HHccCC-eEEEEccCC
Confidence 9988664333 346665 667777653
No 248
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.11 Score=44.37 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.++++||+|+ |.+|..++..+...|. +|+.+++++++.+.+. +.+... ..|..+. ++..+.+++... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 4678999986 9999999999988998 8888888876654332 222211 2233222 123344444322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 249
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.67 E-value=0.098 Score=45.00 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=66.3
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc-
Q 047713 139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~- 212 (329)
..+....++||-+|.+ +|..++.+|+.++. .++++++.+++..+.++ +.|...-+.....+ ..+.+.++..
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhc
Confidence 3445556789988863 58888888887632 28999999998877664 45644333333333 5555555431
Q ss_pred ----CCccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713 213 ----GGVDRSVECTG---SVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 213 ----~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~ 244 (329)
+.||+||--.. ....++.++++|+++ |.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 47999974332 234577888999986 76553
No 250
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.64 E-value=0.11 Score=44.28 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=49.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV 219 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi 219 (329)
++++||+|+ +.+|.++++.+...|+ +|+.++++++. .+.+++.+... ..|..+. ++..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTN-AGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCH-HHHHHHHHHHHhhCCCccEEE
Confidence 468999986 9999999998888899 78877776543 34445555422 2233222 123344444332 3699999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98873
No 251
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.62 E-value=0.098 Score=45.76 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ + ++|.++++.+...|+ +|+.+.++++..+. .+++|.... .|..+.+ +..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence 4789999987 4 899999999888999 77777665432222 233453222 2333321 23334444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999873
No 252
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.59 E-value=0.11 Score=45.81 Aligned_cols=43 Identities=26% Similarity=0.361 Sum_probs=37.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~ 185 (329)
..+.+|+|+|+|++|.+++..+...|+++++.++++.++.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3567999999999999999999999998899999988776644
No 253
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.081 Score=45.68 Aligned_cols=80 Identities=21% Similarity=0.308 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN----EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~----~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.+++++|+|+ |.+|..+++.+...|++.|+.++++.++.. .+++.+... .+|..+.+ ++.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4688999987 999999999998899954888887765543 233334322 22333221 23333333221 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 254
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.58 E-value=0.089 Score=45.35 Aligned_cols=79 Identities=25% Similarity=0.389 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. +++.|... . .|..+. .+..+.+.+... +
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 4789999986 9999999998888899 78888887765433 22223211 1 133222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 255
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.57 E-value=0.044 Score=48.05 Aligned_cols=44 Identities=32% Similarity=0.372 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~ 187 (329)
+|++++|.|+|+.+.+++.-++..|+++++++.++.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999998789999898888665543
No 256
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.57 E-value=0.11 Score=44.10 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=50.5
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+.++||+|+ |.+|..++..+...|. .|+.+.+++++.+. ++..+.... .|..+. ..+.+.+.+... ++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence 578999987 9999999998888899 68888888766443 233343221 233222 123444443322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|.|+.++|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999998864
No 257
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.56 E-value=0.036 Score=52.36 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=35.2
Q ss_pred hccCCCCCCeEE----EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713 138 NVAKPKKGQSVA----IFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF 182 (329)
Q Consensus 138 ~~~~~~~g~~Vl----I~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~ 182 (329)
...++++|+++| |+|+ |++|.+++|+++..|+ .|+++...+.+.
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~ 75 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTW 75 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCcccccc
Confidence 446778889888 8864 9999999999999999 788776555533
No 258
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.098 Score=45.72 Aligned_cols=77 Identities=21% Similarity=0.297 Sum_probs=49.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce---eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRS 218 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~V 218 (329)
.++||+|+ |.+|..++..+...|. +|+.+.+++++.+.+++ ++... ..|..+. ..+.+.+.+... +++|+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDS-AAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence 57999986 9999999998888898 78888888877665543 22211 1233222 123333433322 368999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998873
No 259
>PRK06128 oxidoreductase; Provisional
Probab=95.52 E-value=0.23 Score=44.09 Aligned_cols=79 Identities=24% Similarity=0.251 Sum_probs=47.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--h----HHHHHhcCCcee---eCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--R----FNEAKKFGVTEF---VNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~----~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~- 212 (329)
.++++||+|+ |.+|.+++..+...|+ +|+.+..+.+ + .+.+++.+.... .|..+. .+..+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence 4789999986 9999999998888899 6666544322 1 123334443221 233221 123333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+++|++|++.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 369999998873
No 260
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.11 Score=46.62 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----C-Cc---eeeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----G-VT---EFVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g-~~---~~~~~~~~~~~~~~~~~~~~~- 212 (329)
.|++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ +++ + .. ..+|..+.+ +..+.+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence 3789999987 9999999998888898 788887877654432 222 1 11 112333221 23333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+.+|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 369999988873
No 261
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.081 Score=45.55 Aligned_cols=77 Identities=22% Similarity=0.314 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eee--CCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT-EFV--NPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~-~~~--~~~~~~~~~~~~~~~~~~--~~ 214 (329)
|+++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+. +.+.. ..+ |..+. +++.+.+.+... ++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence 468999986 9999999999988999 8888888776554332 22221 122 22221 123333333322 36
Q ss_pred ccEEEEecC
Q 047713 215 VDRSVECTG 223 (329)
Q Consensus 215 ~d~Vid~~g 223 (329)
+|++|++.|
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 899999887
No 262
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.50 E-value=0.092 Score=45.94 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc------eeeCCCCCCchHHHHHH---h
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT------EFVNPKDYDKPVQQVIA---D 209 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~------~~~~~~~~~~~~~~~~~---~ 209 (329)
.|+.+||+|+ .++|.+++..+...|+ +|+.+.+++++.+... ..+.. ...|..+.+ +..+.+. +
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~l~~~~~~ 84 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV-DVEKLVEFAVE 84 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH-HHHHHHHHHHH
Confidence 5889999976 9999999999999999 8888888888754432 22222 222333221 2222222 2
Q ss_pred hhcCCccEEEEecCC
Q 047713 210 MTNGGVDRSVECTGS 224 (329)
Q Consensus 210 ~~~~~~d~Vid~~g~ 224 (329)
...|++|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 223579999988874
No 263
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.1 Score=45.21 Aligned_cols=79 Identities=24% Similarity=0.294 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
++.+++|+|+ |.+|.+++..+...|+ +|+.++++++..+..++ .+... ..|..+. .+..+.+.+... +.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDP-ASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 4689999986 9999999998888899 78888877654333332 23221 1232221 123333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 264
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.50 E-value=0.037 Score=46.19 Aligned_cols=101 Identities=19% Similarity=0.265 Sum_probs=65.2
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc---
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN--- 212 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--- 212 (329)
+....++||-+|.+ +|..++.+|+.+.- .++++++.++++.+.+++ .|...-+.....+ ..+.+.++..
T Consensus 42 ~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~ 118 (205)
T PF01596_consen 42 RLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGE 118 (205)
T ss_dssp HHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTT
T ss_pred HhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccC
Confidence 34456799999875 48889999987642 399999999998877644 4554333333333 4555555432
Q ss_pred -CCccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713 213 -GGVDRSVECTGS---VQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 213 -~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~ 245 (329)
+.||.||--... ...++.++++|+++ |.++.=
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D 154 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD 154 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence 369999743333 24577888999986 666543
No 265
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.097 Score=45.03 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~ 213 (329)
.+++++|+|+ |.+|..++..+...|+ +|+.+++++++.+. +++.+... ..|..+. .+..+.+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRD-AEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHhC
Confidence 4789999987 9999999998888898 78888887765432 23333321 1222221 12333333322 13
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 266
>PRK04457 spermidine synthase; Provisional
Probab=95.48 E-value=0.21 Score=43.50 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc---eeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVT---EFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~---~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
.++++||++|.|. |..+..+++.....++++++.+++-.+.+++. +.. .-+.....+ ..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~D--a~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEAD--GAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECC--HHHHHHhC-CCCCCEE
Confidence 3567899999874 88888888877545899999999999988764 321 111111122 44444432 3479998
Q ss_pred E-EecC---------CHHHHHHHHHhhccCCeEEEEe
Q 047713 219 V-ECTG---------SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 219 i-d~~g---------~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
+ |... ..+.++.+.+.|+++ |.++.-
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 6 4322 146788899999998 998774
No 267
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.47 E-value=0.1 Score=44.98 Aligned_cols=79 Identities=19% Similarity=0.329 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
+|+++||+|+ +++|.++++.+...|+ +|+.+.+++. ..+.+++.+... ..|..+.+ +..+.+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999986 9999999998888999 7777765432 123344455322 22333322 23344443322 369
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 268
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.45 E-value=0.11 Score=44.86 Aligned_cols=79 Identities=23% Similarity=0.357 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT---EFVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~---~~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+... +.+.. ...|..+. +++.+.+.++.. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~-~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADE-ADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4789999986 9999999998888999 7888888777654432 22322 12233222 123333333222 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 269
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.098 Score=45.22 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc---eeeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVT---EFVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~---~~~~~~~~~~~~~~~~~~~~~- 212 (329)
.++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ +++ +.. ...|..+. .+....+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 4789999986 9999999998888999 788888877665432 222 211 11233222 123333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+.+|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 369999998873
No 270
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.45 E-value=0.12 Score=47.84 Aligned_cols=90 Identities=24% Similarity=0.362 Sum_probs=55.4
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHh--cCC---ceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 148 VAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKK--FGV---TEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 148 VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~--lg~---~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
|+|+|+|.+|..++..+...+.. +|+..+++.++.+.+.+ .+. ...+|..+ .. .+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~-~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PE-SLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HH-HHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HH-HHHHHHh-cCCEEEEC
Confidence 68888899999999988866543 78999999998776543 222 12233322 22 2444433 36999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEE
Q 047713 222 TGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
+|.......+-.|+..+ -+++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98654444555566665 67776
No 271
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.038 Score=48.15 Aligned_cols=76 Identities=26% Similarity=0.388 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSVE 220 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vid 220 (329)
+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|..+. +++.+.+++... +.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence 568999986 9999999998888898 7888888765543221 2221 2233222 234444444332 36999999
Q ss_pred ecCC
Q 047713 221 CTGS 224 (329)
Q Consensus 221 ~~g~ 224 (329)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 272
>PRK06194 hypothetical protein; Provisional
Probab=95.43 E-value=0.097 Score=46.01 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=48.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTE---FVNPKDYDKPVQQVIADMT--NGG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~---~~~~~~~~~~~~~~~~~~~--~~~ 214 (329)
+.++||+|+ |.+|..++..+...|+ +|+.++++.++.+.. .++ +... ..|..+. .++.+.+.... .++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 678999986 9999999998888898 788888776554432 222 3221 1122221 12333333322 136
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 273
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.43 E-value=0.12 Score=45.25 Aligned_cols=69 Identities=20% Similarity=0.109 Sum_probs=49.0
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
.+..+++++|.|+|+.+.+++..++..|++++..+.++.++.+.+ +.++.. +...+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 344567899999999999999999999997899998988877654 344311 11011 112589999
Q ss_pred EecC
Q 047713 220 ECTG 223 (329)
Q Consensus 220 d~~g 223 (329)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9974
No 274
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.43 E-value=0.083 Score=45.67 Aligned_cols=78 Identities=24% Similarity=0.326 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ +..+.+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 3689999986 9999999998888898 78888876543333333 33321 22333321 23333443322 36
Q ss_pred ccEEEEecC
Q 047713 215 VDRSVECTG 223 (329)
Q Consensus 215 ~d~Vid~~g 223 (329)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
No 275
>PRK05717 oxidoreductase; Validated
Probab=95.41 E-value=0.12 Score=44.66 Aligned_cols=79 Identities=23% Similarity=0.290 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
.|.++||+|+ |.+|..++..+...|+ +|+.++++.++.+. .++++... ..|..+. .+..+.+.++.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADE-AQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4789999986 9999999998888898 78888776654433 34444321 2233222 123333343332 3689
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 276
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.13 Score=44.73 Aligned_cols=78 Identities=21% Similarity=0.364 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+.+... .+|..+. .+..+.+++... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY-AAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 5789999987 9999999998888999 788888876654322 2222211 2233322 224444444332 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998775
No 277
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.41 E-value=0.41 Score=41.69 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
.+.+|+|.|.|++|..++..+...|..++..++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 36789999999999999999999998888888765
No 278
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.1 Score=45.69 Aligned_cols=79 Identities=22% Similarity=0.323 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++ .+... ..|..+. .++.+.+.+... +
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHR-EEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence 4789999986 9999999998888999 788887776655432 22 33321 1233222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 279
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.39 E-value=0.095 Score=52.15 Aligned_cols=114 Identities=25% Similarity=0.287 Sum_probs=69.5
Q ss_pred cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713 98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD 176 (329)
Q Consensus 98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~ 176 (329)
+..+|..+++...+.+ +.++++++=.-.. .....-.++++||+|+ |.+|.++++.+...|+ +|+.++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~----------~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~ 445 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRM----------PKEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD 445 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccC----------CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence 3456777777777777 6777776421100 0111224789999986 9999999998888899 888888
Q ss_pred CChhhHHHH-Hh----cCCc----eeeCCCCCCchHHHHHHhhhc--CCccEEEEecCC
Q 047713 177 LNPSRFNEA-KK----FGVT----EFVNPKDYDKPVQQVIADMTN--GGVDRSVECTGS 224 (329)
Q Consensus 177 ~~~~~~~~~-~~----lg~~----~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid~~g~ 224 (329)
++.++.+.+ ++ .+.. ...|..+. .++.+.+.+... +++|++|++.|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 877665433 22 2221 12233222 123344443322 379999999884
No 280
>PRK08643 acetoin reductase; Validated
Probab=95.38 E-value=0.11 Score=44.77 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=49.3
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+... ..|..+.+ ...+.+.+... ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 568999986 9999999999888898 788888877654432 2223221 12332221 23333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 281
>PLN02253 xanthoxin dehydrogenase
Probab=95.37 E-value=0.099 Score=45.79 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--c-e--eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--T-E--FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~-~--~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. .++++. . . ..|..+.+ ...+.+.+... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence 3789999986 9999999998888898 78888776655433 333322 1 1 12333221 23333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 282
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.11 Score=44.54 Aligned_cols=78 Identities=18% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCc-ee--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVT-EF--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~-~~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ ++ .+.. .. .|..+. .+..+.+++... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3678999986 9999999999988898 888888877655432 22 2321 11 122221 123333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
.+|+++.+.|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899998887
No 283
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.11 Score=44.67 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=49.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhc--CCc-ee--eCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKF--GVT-EF--VNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~l--g~~-~~--~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+. ..++ +.. .. .|..+. .+..+.+.+... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence 3679999986 9999999998877898 78888877665443 2222 221 11 132222 123333333322 37
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 284
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.34 E-value=0.093 Score=51.90 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceeeCCCCCC-c
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS---------------------RFNEAKKFGVTEFVNPKDYD-K 201 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~-~ 201 (329)
.+++|+|+|+|+.|+.++..++..|. .|+.++..+. +.++++++|.+..++..-.. .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 6888876542 45667788876655543211 0
Q ss_pred hHHHHHHhhhcCCccEEEEecCCH
Q 047713 202 PVQQVIADMTNGGVDRSVECTGSV 225 (329)
Q Consensus 202 ~~~~~~~~~~~~~~d~Vid~~g~~ 225 (329)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 12 1221 2699999999864
No 285
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.34 E-value=0.12 Score=44.77 Aligned_cols=79 Identities=20% Similarity=0.288 Sum_probs=48.4
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE--FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ +++|.++++.+...|+ +|+.+.+.++..+.+++ ++... ..|..+. ++..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASD-DEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCH-HHHHHHHHHHHHHh
Confidence 4789999983 5899999998888999 77776554433333333 33222 2233322 234444444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999999874
No 286
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.33 E-value=0.11 Score=45.15 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=47.6
Q ss_pred CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
.|++++|+|+ + ++|.++++.+...|+ +|+.+.++++..+.+ ++++.... .|..+.+ +..+.+++...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4788999987 4 799999988888899 777776654222222 23343222 3433322 23444444332
Q ss_pred CCccEEEEecC
Q 047713 213 GGVDRSVECTG 223 (329)
Q Consensus 213 ~~~d~Vid~~g 223 (329)
+.+|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 36999998876
No 287
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.091 Score=44.80 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCC-c---eeeCCCCC-CchH---HHHHHhh
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGV-T---EFVNPKDY-DKPV---QQVIADM 210 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~-~---~~~~~~~~-~~~~---~~~~~~~ 210 (329)
++.+++|+|+ |.+|..+++.+...|. +|+.+++++++.+.+ . +.+. . ...|..+. ...+ .+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999986 9999999998888899 788888888765433 2 2221 1 11222211 1112 2233333
Q ss_pred hcCCccEEEEecCC
Q 047713 211 TNGGVDRSVECTGS 224 (329)
Q Consensus 211 ~~~~~d~Vid~~g~ 224 (329)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32468999999873
No 288
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.089 Score=45.31 Aligned_cols=74 Identities=19% Similarity=0.277 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c-eeeCCCCCCchHHHHHHhhhc--CCccE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T-EFVNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~-~~~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++ +..+. . ...|..+. .++.+.+..... +.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4789999986 9999999998888898 78888777654 11221 1 11232221 123333333322 36899
Q ss_pred EEEecC
Q 047713 218 SVECTG 223 (329)
Q Consensus 218 Vid~~g 223 (329)
+|.+.|
T Consensus 79 vi~~ag 84 (252)
T PRK07856 79 LVNNAG 84 (252)
T ss_pred EEECCC
Confidence 999887
No 289
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.31 E-value=0.12 Score=46.38 Aligned_cols=78 Identities=24% Similarity=0.324 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC---c-e--eeCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV---T-E--FVNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~---~-~--~~~~~~~~~~~~~~~~~~~--~~ 213 (329)
++.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+. .+++.. . . ..|..+.+ +..+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence 4678999986 9999999998888898 78888887776543 333321 1 1 12332211 2333333322 22
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 290
>PRK09186 flagellin modification protein A; Provisional
Probab=95.28 E-value=0.12 Score=44.38 Aligned_cols=78 Identities=22% Similarity=0.434 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc---e-eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVT---E-FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~---~-~~~~~~~~~~~~~~~~~~~~- 212 (329)
+++++||+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+ +++ +.. . ..|..+.+ ++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4789999986 9999999999988998 788888777665432 222 221 1 22333321 23333443322
Q ss_pred -CCccEEEEecC
Q 047713 213 -GGVDRSVECTG 223 (329)
Q Consensus 213 -~~~d~Vid~~g 223 (329)
+++|++|++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 291
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.28 E-value=0.12 Score=44.66 Aligned_cols=79 Identities=25% Similarity=0.313 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~ 213 (329)
++.++||+|+ |.+|..++..+...|+ .|+.+.+++++.+. +++.+.... .|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 3789999987 9999999999988999 78888787755432 233443321 1222211 2223333222 13
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 292
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.26 E-value=0.53 Score=39.26 Aligned_cols=91 Identities=14% Similarity=0.043 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-h-HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-R-FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.|.+|||.|+|.+|...+..+...|+ +|++++.... . .+++.+ +.- ........ +..-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~~~--------~~~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKEFE--------PSDIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecCCC--------hhhcCCceEEEEc
Confidence 47899999999999999988888887 7777754321 1 122222 211 11111111 0001268999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
++.+ .++..+...+.. +.++....
T Consensus 78 T~d~-elN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDP-RVNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCH-HHHHHHHHHHHh-CCcEEECC
Confidence 9775 444444444444 55555543
No 293
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.14 Score=44.26 Aligned_cols=77 Identities=22% Similarity=0.282 Sum_probs=50.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcC-Cc---eeeCCCCCCchHHHHHHhhh---cCCcc
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFG-VT---EFVNPKDYDKPVQQVIADMT---NGGVD 216 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg-~~---~~~~~~~~~~~~~~~~~~~~---~~~~d 216 (329)
+++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. .++ .. ...|..+.+ ++.+.+++.. .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 47899986 9999999998888898 8888888887765543 332 11 122333322 2344444332 34799
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999874
No 294
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.24 E-value=0.14 Score=44.13 Aligned_cols=77 Identities=23% Similarity=0.403 Sum_probs=49.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... ..|..+. .+....+.+... +.+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQ-DSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 678999986 9999999999988999 788888887766543 3343211 1222221 123333333322 36899
Q ss_pred EEEecC
Q 047713 218 SVECTG 223 (329)
Q Consensus 218 Vid~~g 223 (329)
++.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 998876
No 295
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.23 E-value=0.29 Score=43.24 Aligned_cols=93 Identities=19% Similarity=0.214 Sum_probs=55.5
Q ss_pred CeEEEEcCCHHHHH-HHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 146 QSVAIFGLGAVGLA-AAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 146 ~~VlI~Gag~iG~a-ai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
-+|.|+|.|.+|.. +..+.+.-+.+.+.+++.+++ .+++++++|...... + +...+....-.++|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~----~--ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSAE----G--IDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccC----C--HHHHHhCcCCCCCCEEEECC
Confidence 46889999999987 444555446633444444443 346678888543221 1 33333221113699999999
Q ss_pred CCHHHHHHHHHhhccCCeEEEEe
Q 047713 223 GSVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 223 g~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
+...+.+.+..++..+ -+++..
T Consensus 79 ~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 79 SAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CHHHHHHHHHHHHHcC-CeEEEC
Confidence 8777777777666654 444444
No 296
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.14 Score=44.40 Aligned_cols=78 Identities=24% Similarity=0.334 Sum_probs=49.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+. ..+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 357999987 9999999998888898 888888877654322 2233321 1122221 123333343322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 297
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.22 E-value=0.16 Score=43.75 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.+++|+|+ |.+|.+++..+...|+ +|+.+++++++.+. +++.+... ..|..+. .++.+.+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 4889999986 9999999998888898 88888887765433 22334211 1132221 223444443322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999988874
No 298
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.19 E-value=0.29 Score=42.94 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=65.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCcee-e-CCCCC--CchHHHHHHhhhcCCccEEE-
Q 047713 146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVTEF-V-NPKDY--DKPVQQVIADMTNGGVDRSV- 219 (329)
Q Consensus 146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~~~-~-~~~~~--~~~~~~~~~~~~~~~~d~Vi- 219 (329)
++|||.|.|. |-.+-.++++...+++++++.+++-.++++++ +.... . +++-. -.+..+.+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997543 56677888888888999999999999998874 32221 1 11110 0124445554433 799986
Q ss_pred EecCC---------HHHHHHHHHhhccCCeEEEEe
Q 047713 220 ECTGS---------VQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 220 d~~g~---------~~~~~~~~~~l~~~~G~vv~~ 245 (329)
|+.-. .+.++.+-++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 44322 45688999999998 988877
No 299
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.19 E-value=0.15 Score=43.92 Aligned_cols=79 Identities=16% Similarity=0.328 Sum_probs=48.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
.|+++||+|+ |.+|.++++.+...|+ +|+.++..+. ..+.+++++... ..|..+. ++..+.+.+... +++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKI-DGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence 3789999986 9999999999888999 7777755432 223344444321 1222221 123333443322 379
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|++|++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 300
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.14 Score=44.71 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=48.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---e--eeCCCCCCchHHHHHHhhhc--
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT---E--FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~---~--~~~~~~~~~~~~~~~~~~~~-- 212 (329)
++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ..+.. . ..|..+. +++.. +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHhc
Confidence 578999987 9999999998888898 7888887776554332 22211 1 1233322 12333 444322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|+|+.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999998873
No 301
>PRK08317 hypothetical protein; Provisional
Probab=95.18 E-value=0.27 Score=41.74 Aligned_cols=105 Identities=23% Similarity=0.285 Sum_probs=67.5
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcC--CceeeCCCCCCchHHHHHHhhhc
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKFG--VTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+.+...+.++++||..|+|. |..+..+++..+ ..++++++.+++..+.+++.. ....+.....+ ... .....
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~--~~~~~ 85 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG--LPFPD 85 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc--CCCCC
Confidence 34566788899999999875 888888988763 338999999998888776641 11101000001 100 01122
Q ss_pred CCccEEEEec------CCHHHHHHHHHhhccCCeEEEEec
Q 047713 213 GGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 213 ~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+.+|+|+-.. .....+....++|+++ |.++...
T Consensus 86 ~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 86 GSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 3789887432 1234678888899998 9988765
No 302
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.17 E-value=0.21 Score=39.88 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.|.+|+|.|+|.+|..-++.+...|+ .|.+++ ++..+.+++++.-.. ..+.. ++..-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~~--------~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKTF--------SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eeccc--------ChhcCCCceEEEECCC
Confidence 47899999999999999998888898 777774 333333444542111 11111 1111126899999986
Q ss_pred CHHHHHHHHHhhccC
Q 047713 224 SVQAMISAFECVHDG 238 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~ 238 (329)
.. ..+..+..++..
T Consensus 80 d~-e~N~~i~~~a~~ 93 (157)
T PRK06719 80 QH-AVNMMVKQAAHD 93 (157)
T ss_pred CH-HHHHHHHHHHHH
Confidence 64 455555544443
No 303
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.16 E-value=0.015 Score=51.25 Aligned_cols=96 Identities=24% Similarity=0.375 Sum_probs=56.0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceee-CCCCCCchHHHHHHhhhcCCcc
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFV-NPKDYDKPVQQVIADMTNGGVD 216 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d 216 (329)
..+|++||=.|+|. |.+++..++ +|+++|++++.++...+.+++ .|....+ ..... +...+.||
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~---------~~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE---------DLVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS---------CTCCS-EE
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec---------ccccccCC
Confidence 57789999887642 555555555 588899999999976665543 2322111 11111 11124799
Q ss_pred EEEEecCCHHH---HHHHHHhhccCCeEEEEeccCC
Q 047713 217 RSVECTGSVQA---MISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 217 ~Vid~~g~~~~---~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|+-..-..-. .+...++++++ |.+++.|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 99966633222 23344568887 9999887633
No 304
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.16 Score=43.83 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=48.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-h-HH---HHHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-R-FN---EAKKFGVTE---FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~-~~---~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~-- 212 (329)
.++++||+|+ +.+|.++++.+...|+ +|+.++++++ . .+ .++..+... ..|..+. ++..+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK-ADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 4789999986 9999999999988998 7777776543 2 12 223334221 1232222 123333433322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 305
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.15 E-value=0.15 Score=44.11 Aligned_cols=76 Identities=21% Similarity=0.338 Sum_probs=48.2
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCcee--eCCCCCCchHHHHHHhhhc--CCccE
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGVTEF--VNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~~~~--~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ + +.+.... .|..+. ++..+.+++... +++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence 5899986 9999999998888899 788888877665432 2 2232112 232221 123344443322 37999
Q ss_pred EEEecCC
Q 047713 218 SVECTGS 224 (329)
Q Consensus 218 Vid~~g~ 224 (329)
+|++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 306
>PRK06398 aldose dehydrogenase; Validated
Probab=95.13 E-value=0.08 Score=45.85 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=47.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi 219 (329)
.|+++||+|+ +.+|.+++..+...|+ +|+.+++++++.. ... ...|..+.+ +..+.+.+... +.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 3789999986 9999999999998999 7888877654321 111 122333221 23344443332 3699999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 307
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.16 Score=43.48 Aligned_cols=77 Identities=25% Similarity=0.406 Sum_probs=48.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c-----CCc-e--eeCCCCCCchHHHHHHhhhc--
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-F-----GVT-E--FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-l-----g~~-~--~~~~~~~~~~~~~~~~~~~~-- 212 (329)
++++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.. + +.. . ..|..+. +++.+.+++...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 468999986 9999999988888898 78888887776544321 1 211 1 1233322 224444444332
Q ss_pred CCccEEEEecC
Q 047713 213 GGVDRSVECTG 223 (329)
Q Consensus 213 ~~~d~Vid~~g 223 (329)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 36999999886
No 308
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.11 E-value=0.15 Score=44.57 Aligned_cols=78 Identities=23% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HH---hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AK---KFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~---~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++++++|+|+ |.+|.+++..+...|+ +|+.+++++++.+. .+ +.+... ..|..+. .+....+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 4789999986 9999999999888999 78888877655433 22 223221 1233222 123333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 309
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.28 Score=41.66 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+|++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+ ++.+... . .|..+. ++..+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQ-ESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4789999986 9999999998888999 788888877765432 2334321 1 232222 223333333321 3
Q ss_pred -CccEEEEecC
Q 047713 214 -GVDRSVECTG 223 (329)
Q Consensus 214 -~~d~Vid~~g 223 (329)
.+|++|++.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999886
No 310
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.11 E-value=0.17 Score=43.53 Aligned_cols=79 Identities=25% Similarity=0.362 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHh---cCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKK---FGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. ..+ .+... . .|..+. +.+.+.+.++.. +
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK-QEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH-HHHHHHHHHHHHhcC
Confidence 4789999986 9999999998888898 78888887665433 222 23211 1 232222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 311
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.11 E-value=0.094 Score=42.39 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=58.0
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
.|.|+|+ |.+|...++-|+..|. .|+++.++++|....+..-+ ..+++. .. +.+. -.++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~-------~~-~a~~-l~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDL-------TS-LASD-LAGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccCh-------hh-hHhh-hcCCceEEEecc
Confidence 4678886 9999999999999999 89999999988754322211 111111 11 1111 127999999998
Q ss_pred CH--H-------HHHHHHHhhccC-CeEEEEeccC
Q 047713 224 SV--Q-------AMISAFECVHDG-WGVAVLVGVP 248 (329)
Q Consensus 224 ~~--~-------~~~~~~~~l~~~-~G~vv~~g~~ 248 (329)
.. . ..+..+..|+.. --|+..+|..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 54 1 233455666652 1477777753
No 312
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.09 E-value=0.18 Score=44.99 Aligned_cols=91 Identities=22% Similarity=0.387 Sum_probs=59.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713 146 QSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 146 ~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
.+|.|+|.|.+|...+..++..|. ..|++.++++++.+.+++.|...... . + ....+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~--~--~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-T--S--AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-C--C--HHHHh-----cCCCEEEECCCH
Confidence 579999999999999998887774 37889999998888888877532111 0 1 11111 247999999864
Q ss_pred HHH---HHHHHHhhccCCeEEEEecc
Q 047713 225 VQA---MISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 225 ~~~---~~~~~~~l~~~~G~vv~~g~ 247 (329)
... +......++++ ..++.++.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 322 22222345555 56666554
No 313
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.16 Score=44.29 Aligned_cols=78 Identities=22% Similarity=0.413 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcC-----Cc-ee--eCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFG-----VT-EF--VNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg-----~~-~~--~~~~~~~~~~~~~~~~~~~- 212 (329)
++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. .+++. .. .. .|..+. .+..+.+++...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence 3689999987 9999999999988999 78888887665432 22221 11 11 133222 123344443332
Q ss_pred -CCccEEEEecC
Q 047713 213 -GGVDRSVECTG 223 (329)
Q Consensus 213 -~~~d~Vid~~g 223 (329)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 36899999887
No 314
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.16 Score=45.23 Aligned_cols=78 Identities=15% Similarity=0.245 Sum_probs=48.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-e--eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVT-E--FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~-~--~~~~~~~~~~~~~~~~~~~~- 212 (329)
.++++||+|+ |.+|.+++..+...|+ +|+.+.++.++.+.+ +++ +.. . ..|..+.+ +..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA-SVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHhh
Confidence 5789999986 9999999998888898 788887776654322 221 111 1 12332221 23333333322
Q ss_pred -CCccEEEEecC
Q 047713 213 -GGVDRSVECTG 223 (329)
Q Consensus 213 -~~~d~Vid~~g 223 (329)
+++|++|.++|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 36999999887
No 315
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.08 E-value=0.18 Score=44.26 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=62.3
Q ss_pred ccccccchhhhhhhccCC-CCCCeEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCch
Q 047713 125 LSCGISTGFGATVNVAKP-KKGQSVAIFGLG-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP 202 (329)
Q Consensus 125 ~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 202 (329)
+||+....+. +++...+ -.|.+|+|.|.| .+|.-++.++...|+ .|+.+.+....
T Consensus 138 ~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~--------------------- 194 (286)
T PRK14175 138 VPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD--------------------- 194 (286)
T ss_pred CCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh---------------------
Confidence 4443333333 3444443 369999999985 599999999999998 78777543211
Q ss_pred HHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 203 VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 203 ~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 195 l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 195 MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 222222 37999999998766555 357887 788888763
No 316
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.07 E-value=0.12 Score=41.20 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=48.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHH-H---HHhcCCceee---CCCCCCchHHHHHHhhh--cC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN--PSRFN-E---AKKFGVTEFV---NPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~--~~~~~-~---~~~lg~~~~~---~~~~~~~~~~~~~~~~~--~~ 213 (329)
+++||+|+ +++|.+.++.+...|..+|+.+.++ .++.+ . ++..+....+ |..+ .++....+++.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 37899986 9999999998877777688888887 33333 2 2333432111 1111 122444444443 23
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998884
No 317
>PLN02823 spermine synthase
Probab=95.07 E-value=0.25 Score=44.54 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c-eeeCCCCC---CchHHHHHHhhhcCCccEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-T-EFVNPKDY---DKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~-~~~~~~~~---~~~~~~~~~~~~~~~~d~V 218 (329)
..++|||.|+|. |..+..+++..+.+++++++.+++-.+.++++-. . ..+....- ..+..+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998763 6666778887777799999999999999887421 1 11110000 0123344433 33479998
Q ss_pred E-Eec-----C------CHHHHH-HHHHhhccCCeEEEEe
Q 047713 219 V-ECT-----G------SVQAMI-SAFECVHDGWGVAVLV 245 (329)
Q Consensus 219 i-d~~-----g------~~~~~~-~~~~~l~~~~G~vv~~ 245 (329)
| |.. | +.+.++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 6 422 1 123455 678899998 987654
No 318
>PRK07985 oxidoreductase; Provisional
Probab=95.07 E-value=0.34 Score=42.90 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=47.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN--PSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~--~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~- 212 (329)
.++++||+|+ +.+|.++++.+...|+ +|+.+..+ .++.+.+ ++.+... ..|..+. ++..+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 4679999987 9999999998888999 67776543 2222222 2333321 2233222 123344444332
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+++|+++.+.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 368999988763
No 319
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.06 E-value=0.15 Score=44.02 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=48.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN---EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~---~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
.++++||+|+ +.+|.++++.+...|+ +|+.+.++++..+ .+.+.+... ..|..+.+ ...+.+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4789999987 9999999999988999 7777766632112 223334221 22332221 23333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 320
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.06 E-value=0.083 Score=44.37 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=62.9
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 211 (329)
+....+++++.+||-.|+|. |..+..+++.. . +|++++.+++..+.+++ ++...+ .....+ ... ...
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~---~~~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWK---GWP 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--ccc---CCC
Confidence 34567788999999998753 55555566654 3 79999999877665543 343221 111111 101 111
Q ss_pred c-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 212 N-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 212 ~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
. +.+|+|+-............+.|+++ |+++..-.
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~~ 176 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPVG 176 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEEc
Confidence 1 36999886554555566778899998 98876543
No 321
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.05 E-value=0.72 Score=40.62 Aligned_cols=60 Identities=22% Similarity=0.246 Sum_probs=45.1
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHhcCCceeeCCC
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD--LNPSRFNEAKKFGVTEFVNPK 197 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~--~~~~~~~~~~~lg~~~~~~~~ 197 (329)
....++||.+|+--=+|++|.+.+.+|+.+|++-+++.. .+.++.++++.+|+..+....
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 455689998554433599999999999999995444443 267888999999997766554
No 322
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.05 E-value=0.37 Score=42.39 Aligned_cols=88 Identities=23% Similarity=0.270 Sum_probs=55.1
Q ss_pred eEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCChhh--HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 147 SVAIFGLGAVGLAA-AEGARVSGASRIIGVDLNPSR--FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 147 ~VlI~Gag~iG~aa-i~la~~~G~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
+|.|+|+|.+|... ..+.+..+.+.+-.++.++++ +++.+++|....... +...+. ...+|+||++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECCC
Confidence 57889999999855 556555566333334444443 466788886543321 222221 126999999998
Q ss_pred CHHHHHHHHHhhccCCeEEEEe
Q 047713 224 SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 224 ~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
...+.+.+..++.. |+.+..
T Consensus 74 ~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEE
Confidence 88777888777776 454444
No 323
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.16 Score=44.35 Aligned_cols=76 Identities=24% Similarity=0.365 Sum_probs=47.7
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE----FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
+++|+|+ |++|..+++.+...|+ +|+.+.+++++.+.. +..+... ..|..+.+ ...+.+.+... +++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence 6899986 9999999998888898 788887776654332 2333321 23333321 22232333222 369
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 324
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.19 Score=43.37 Aligned_cols=78 Identities=21% Similarity=0.357 Sum_probs=48.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--e--eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT--E--FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~--~--~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +++... . ..|..+.+ ++...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence 468999987 9999999998888898 788888877665433 333211 1 12222211 23333333322 3689
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 325
>PRK09242 tropinone reductase; Provisional
Probab=95.03 E-value=0.17 Score=43.71 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-----CCce---eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF-----GVTE---FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l-----g~~~---~~~~~~~~~~~~~~~~~~~~- 212 (329)
.++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. ++ +... ..|..+. ++....+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD-EDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHHHH
Confidence 4789999986 9999999999988999 7888888776654332 22 2111 1233222 123333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 379999999974
No 326
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.02 E-value=0.15 Score=44.66 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=49.8
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHhcCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNE-AKKFGVTE--FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~-~~~lg~~~--~~~~~~~~~~~~~~~~~~~~-- 212 (329)
.++++||+|+ +++|++++..+...|+ +|+.+.++++ +.+. .++++... ..|..+.+ +..+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence 3789999985 5899999998888999 7777777642 2222 23445322 23333322 23334444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+++++.|.
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 327
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.00 E-value=0.37 Score=40.52 Aligned_cols=102 Identities=20% Similarity=0.181 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeC-------CCCCC-chHHHHHHhhh-
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVN-------PKDYD-KPVQQVIADMT- 211 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~-------~~~~~-~~~~~~~~~~~- 211 (329)
+.++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ ++.+...... +.... .-....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35678999999874 888888886 688 899999999988764 3333211000 00000 00000111111
Q ss_pred --cCCccEEEEecCC--------HHHHHHHHHhhccCCeEEEEecc
Q 047713 212 --NGGVDRSVECTGS--------VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 212 --~~~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.+.+|.|+|..-. ...++...++|+++ |++.....
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999997521 23567888899998 98666654
No 328
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.99 E-value=0.19 Score=42.84 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-e--eCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE-F--VNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++.++||+|+ |.+|..++..+...|. .|+...++.++.+.+ .+++... . .|..+. +.+.+.+.+... +++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDR-DEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence 3679999986 9999999998888898 777777776665543 3344321 1 222221 123333333222 3699
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 329
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.99 E-value=0.12 Score=51.20 Aligned_cols=77 Identities=23% Similarity=0.291 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceeeCCCCCCc
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS---------------------RFNEAKKFGVTEFVNPKDYDK 201 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~ 201 (329)
..+++|+|+|+|+.|+.++..++..|. +|++++..+. ..+.++++|.+...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 7888876432 345566777654433211100
Q ss_pred hHHHHHHhhhcCCccEEEEecCC
Q 047713 202 PVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 202 ~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
. .+.++. .++|.||.++|.
T Consensus 404 -i--~~~~~~-~~~DavilAtGa 422 (654)
T PRK12769 404 -I--SLESLL-EDYDAVFVGVGT 422 (654)
T ss_pred -C--CHHHHH-hcCCEEEEeCCC
Confidence 0 011111 258999998885
No 330
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.99 E-value=0.17 Score=43.44 Aligned_cols=76 Identities=17% Similarity=0.292 Sum_probs=49.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce---eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRSV 219 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~Vi 219 (329)
+++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+.. ++... ..|..+. +++.+.+.+... ++.|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 5889986 9999999999888899 78888888877655433 34321 1233222 123333333322 3699999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88864
No 331
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.98 E-value=0.14 Score=44.64 Aligned_cols=79 Identities=24% Similarity=0.291 Sum_probs=50.0
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhcC-C-ceeeCCCCCC--chHHHHHHhhhcC
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR----FNEAKKFG-V-TEFVNPKDYD--KPVQQVIADMTNG 213 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~----~~~~~~lg-~-~~~~~~~~~~--~~~~~~~~~~~~~ 213 (329)
-+|+.|||+|+ +++|.+.++=....|+ +++..+.+++. .+.+++.| + ....|..+.+ ....+.+++.. |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-G 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence 46999999976 8999988887777888 77777765543 23344444 2 2344443322 11333344332 2
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
.+|++++.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7999999988
No 332
>PRK01581 speE spermidine synthase; Validated
Probab=94.96 E-value=0.44 Score=43.26 Aligned_cols=102 Identities=17% Similarity=0.083 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c----eeeCCCCC---CchHHHHHHhhhcC
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-T----EFVNPKDY---DKPVQQVIADMTNG 213 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~----~~~~~~~~---~~~~~~~~~~~~~~ 213 (329)
....++|||.|+| .|.++..+++..+.++|++++.+++-.+.++++.. . ..++...- ..+..+.+++ ..+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 3446799999865 56777888887666699999999999999886311 0 00000000 0113444443 234
Q ss_pred CccEEEEecCC-----------HHHHHHHHHhhccCCeEEEEec
Q 047713 214 GVDRSVECTGS-----------VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 214 ~~d~Vid~~g~-----------~~~~~~~~~~l~~~~G~vv~~g 246 (329)
.+|+||--... .+.+..+.+.|+++ |.++.-.
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 79998633211 23567888899998 9887664
No 333
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.96 E-value=0.59 Score=34.80 Aligned_cols=74 Identities=26% Similarity=0.359 Sum_probs=52.5
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713 148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ 226 (329)
Q Consensus 148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~ 226 (329)
|+|.|.|.+|..+++.++..+. +|+.++.++++.+.+++.|...+. -+..+ .+.++++.-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~~~---~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDATD---PEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-TTS---HHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccchh---hhHHhhcCccccCEEEEccCCHH
Confidence 5778999999999999998665 899999999999999988854333 22211 23445443347888888876543
No 334
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.13 Score=43.67 Aligned_cols=73 Identities=21% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcC-CccEEEEe
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNG-GVDRSVEC 221 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~ 221 (329)
++++||+|+ |.+|..++..+...|. +|+.+.++.++ .+... ...|..+. .+..+.+.+.... +.|++|.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADI-EQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCH-HHHHHHHHHHHHhCCCcEEEEC
Confidence 578999987 9999999998888898 78888776554 11111 12233222 1233444444333 68999998
Q ss_pred cCC
Q 047713 222 TGS 224 (329)
Q Consensus 222 ~g~ 224 (329)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 335
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.96 E-value=0.19 Score=43.48 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=48.0
Q ss_pred CCCeEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhH---H-HHHhcCCceee--CCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGLG---AVGLAAAEGARVSGASRIIGVDLNPSRF---N-EAKKFGVTEFV--NPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Gag---~iG~aai~la~~~G~~~vv~~~~~~~~~---~-~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~-- 212 (329)
+|+++||+|++ ++|.++++.+...|+ +|+.+.++++.. + ..++++....+ |..+. ++..+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHc
Confidence 47899999863 899999998888998 777777665432 2 22334432222 22222 123333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+++++.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999998873
No 336
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.94 E-value=0.15 Score=43.75 Aligned_cols=78 Identities=27% Similarity=0.360 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|...+..+...|. +|+.+++++++.+.. .+ .+... ..|..+. .+..+.+.++.. +
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3679999986 9999999998888898 788888877665432 22 23221 2233221 123333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|+||.++|
T Consensus 81 ~~d~vi~~a~ 90 (258)
T PRK12429 81 GVDILVNNAG 90 (258)
T ss_pred CCCEEEECCC
Confidence 6899998886
No 337
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.93 E-value=0.31 Score=41.41 Aligned_cols=91 Identities=19% Similarity=0.228 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHhcCCceeeCCCCCCchHHHHHH
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGAS--RIIGVDLN----PSR--------FNEAKKFGVTEFVNPKDYDKPVQQVIA 208 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~--~vv~~~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~~~ 208 (329)
-++.+++|+|+|..|.+++..+...|.+ +++.++++ .++ .+++++++... . +.+ +.+.++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~~--l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GGT--LKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cCC--HHHHHh
Confidence 3578999999999999999998888997 79888887 333 33444443211 0 011 333332
Q ss_pred hhhcCCccEEEEecCCHHHH-HHHHHhhccCCeEEEEec
Q 047713 209 DMTNGGVDRSVECTGSVQAM-ISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 209 ~~~~~~~d~Vid~~g~~~~~-~~~~~~l~~~~G~vv~~g 246 (329)
++|++|++++. ..+ +..++.+.+. ..+..+.
T Consensus 97 -----~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence 38999999963 232 3555666665 5555444
No 338
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.93 E-value=0.41 Score=40.55 Aligned_cols=103 Identities=22% Similarity=0.342 Sum_probs=59.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh------h-------------H----HHHHhcCCc-eeeCCCCCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS------R-------------F----NEAKKFGVT-EFVNPKDYD 200 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~------~-------------~----~~~~~lg~~-~~~~~~~~~ 200 (329)
...|+|.|.|++|..++..+...|..++..++-++= | - ++.++.... ++...++.
T Consensus 30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f- 108 (263)
T COG1179 30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF- 108 (263)
T ss_pred hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh-
Confidence 578999999999999999999899887777765441 1 1 111122211 11111111
Q ss_pred chHHHHHHhhhcCCccEEEEecCCHHHHHHHHH-hhccCCeEEEEeccCCC
Q 047713 201 KPVQQVIADMTNGGVDRSVECTGSVQAMISAFE-CVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 201 ~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~-~l~~~~G~vv~~g~~~~ 250 (329)
-..+.+.++...++|+|+||.-.-..--..+. |.+.. =.++..+...+
T Consensus 109 -~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~ 157 (263)
T COG1179 109 -ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG 157 (263)
T ss_pred -hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence 12345566666689999999854333223333 44544 45666654433
No 339
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.17 Score=43.78 Aligned_cols=77 Identities=25% Similarity=0.365 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc-ee--eCCCCCCchHHHHHHhhhcCC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVT-EF--VNPKDYDKPVQQVIADMTNGG 214 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~-~~--~~~~~~~~~~~~~~~~~~~~~ 214 (329)
.+++++|+|+ +++|..+++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+. ++....++.. +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP-EAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHh--CC
Confidence 3789999987 9999999998888899 8888888776654422 12 221 11 222221 1222222221 46
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 340
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.90 E-value=0.2 Score=42.92 Aligned_cols=78 Identities=24% Similarity=0.316 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-ee--CCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-FV--NPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.++||+|+ |.+|..++..+...|+ .|+.++++.++.+.+ ++.+... .+ |..+. ....+.+++... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR-DSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3688999986 9999999998888898 788887776654433 2223211 11 22221 123333433322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 341
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.89 E-value=0.17 Score=43.64 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=47.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCc--eee--CCCCCCchHHHHHHhhhc--
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK----FGVT--EFV--NPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~----lg~~--~~~--~~~~~~~~~~~~~~~~~~-- 212 (329)
++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+.+ .+ .+.. ..+ |..+. ++..+.+.++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE-QSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH-HHHHHHHHHHHHHc
Confidence 468999986 9999999998888898 788888776654332 22 2211 111 22221 123333333322
Q ss_pred CCccEEEEecC
Q 047713 213 GGVDRSVECTG 223 (329)
Q Consensus 213 ~~~d~Vid~~g 223 (329)
+++|+++++.|
T Consensus 80 ~~id~vv~~ag 90 (259)
T PRK12384 80 GRVDLLVYNAG 90 (259)
T ss_pred CCCCEEEECCC
Confidence 37899999887
No 342
>PRK08264 short chain dehydrogenase; Validated
Probab=94.88 E-value=0.13 Score=43.67 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-ee--eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EF--VNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~--~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
.+.+++|+|+ |.+|..++..+...|.++|+.+.++.++.+. .+.. .. .|..+.+ ++.+.++.. +.+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHhc--CCCCEEE
Confidence 4678999986 9999999998888898568888777665432 2221 11 1222211 122222221 2589999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 343
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=94.86 E-value=0.26 Score=40.71 Aligned_cols=41 Identities=34% Similarity=0.436 Sum_probs=33.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~ 185 (329)
++.+++|+|+ |.+|..++..+...|. +|+.+.++.++.+.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l 68 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKA 68 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 5789999986 9999998888888887 888888887766543
No 344
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.86 E-value=0.37 Score=41.74 Aligned_cols=100 Identities=20% Similarity=0.221 Sum_probs=65.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc-C
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN-G 213 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~-~ 213 (329)
+.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.-.. ..+. .+ . .+... .
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~d--~----~~~~~~~ 92 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---AD--I----ASWQPPQ 92 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---Cc--h----hccCCCC
Confidence 34455667889999998763 67777888776444999999999988887764221 1111 11 1 11122 3
Q ss_pred CccEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713 214 GVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 214 ~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
.+|+|+-... ....+....+.|+++ |.++...
T Consensus 93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 7999875432 124577888899998 9887753
No 345
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.84 E-value=0.2 Score=43.62 Aligned_cols=78 Identities=15% Similarity=0.265 Sum_probs=47.2
Q ss_pred CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCcee--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEF--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
.|+++||+|+ + ++|.+++..+...|+ +|+.+.++++..+.++++ +.... .|..+. ++..+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence 4789999986 3 799999998888898 777776653222223322 22111 233222 224444444332
Q ss_pred CCccEEEEecC
Q 047713 213 GGVDRSVECTG 223 (329)
Q Consensus 213 ~~~d~Vid~~g 223 (329)
+.+|++|++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999987
No 346
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.83 E-value=0.2 Score=44.92 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=47.1
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
+|||+|+ |-+|..++..+...|. .|.+++++.++...+...+.+.+. |..+. ..+.+.. .++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al-~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSF-KGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHH-CCCCEEEECCC
Confidence 6899987 9999999998888898 788888877665555555554332 22221 1223322 25899998865
No 347
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.82 E-value=0.21 Score=42.52 Aligned_cols=78 Identities=22% Similarity=0.360 Sum_probs=49.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+.. +..+... ..|..+. .++.+.+++... ++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY-EEVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 578999986 9999999998888899 888888877654432 2223211 1122221 123344443322 37
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998864
No 348
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.27 Score=41.53 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=47.7
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
+++|+|+ |.+|.++++.+...|+ +|+.+.+++++.+.+ ++++...+ .|..+.+ ++.+.+++.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHHh-hcCcEEEECCC
Confidence 4889986 9999999998888898 788888887776543 44444322 2332221 2333333322 35899998765
No 349
>PRK06484 short chain dehydrogenase; Validated
Probab=94.78 E-value=0.19 Score=48.33 Aligned_cols=79 Identities=23% Similarity=0.367 Sum_probs=53.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+. .++++... ..|..+. .+..+.+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDE-AQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence 5789999986 9999999999999999 88888887776554 45555432 2233322 124444444332 3799
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998874
No 350
>PRK06720 hypothetical protein; Provisional
Probab=94.78 E-value=0.32 Score=39.28 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=31.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF 182 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~ 182 (329)
++..++|+|+ +++|.+.+..+...|+ +|+.++.+++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4789999987 8999999998888898 788888776554
No 351
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.77 E-value=0.36 Score=41.15 Aligned_cols=35 Identities=37% Similarity=0.535 Sum_probs=30.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
..+|+|.|.|++|..++..+...|..+++.++.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46899999999999999999889998888887653
No 352
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.76 E-value=0.33 Score=43.72 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCCHHHHHHHHH-HHHcCCCEEEEEcCChhhHHH-HHhc----CCceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713 143 KKGQSVAIFGLGAVGLAAAEG-ARVSGASRIIGVDLNPSRFNE-AKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVD 216 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~l-a~~~G~~~vv~~~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d 216 (329)
+..++++|+|+|..|.+.+.. +...+.++|...++++++.+. ++++ +... ....+ ..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC----HHHHH-----hcCC
Confidence 456789999999999877754 446788889999998887654 3333 3321 11111 33333 2489
Q ss_pred EEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 217 RSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 217 ~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+|+.++++...+ .. +.++++ -++..+|...
T Consensus 195 iVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence 999999765432 33 778887 7888887643
No 353
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.23 Score=43.42 Aligned_cols=78 Identities=19% Similarity=0.248 Sum_probs=49.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc-ee--eCCCCCCchHHHHHHhhhc--CCccE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVT-EF--VNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~-~~--~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+.+ ++.. .. .|..+. .++.+.+..... +++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDR-AAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 468999986 9999999998888898 78888888776654433 3221 11 122221 123333333221 36899
Q ss_pred EEEecCC
Q 047713 218 SVECTGS 224 (329)
Q Consensus 218 Vid~~g~ 224 (329)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 354
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.74 E-value=0.26 Score=44.60 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=30.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
+.+|+|.|+|++|..++..+...|..++..++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 56899999999999999999999998888888764
No 355
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.51 Score=40.17 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=46.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFN----EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
++.++||+|+ |.+|...+..+...|+ +++.+.++ +++.+ .+++.+... . .|..+. ++..+.+++...
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA-AAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence 4689999986 9999999999988998 56555443 32222 223333221 1 222221 123333333221
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 356
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.72 E-value=0.28 Score=41.50 Aligned_cols=94 Identities=23% Similarity=0.324 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--CCCCCCchHHHHHHhhhc--CCccEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--NPKDYDKPVQQVIADMTN--GGVDRS 218 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~--~~~d~V 218 (329)
-+|.+||=.|+|+ |+++.-+|+ .|+ .|++++.+++..+.++.-.....+ ++.. ..+.++.. +.||+|
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~~~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLASAGGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHhcCCCccEE
Confidence 4688999888854 676666666 567 999999999999988754333222 2322 23444443 389999
Q ss_pred E-----EecCCHH-HHHHHHHhhccCCeEEEEec
Q 047713 219 V-----ECTGSVQ-AMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 219 i-----d~~g~~~-~~~~~~~~l~~~~G~vv~~g 246 (329)
+ +-+..++ .+..+.++++|+ |.+....
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 6 3444433 466788899998 8876653
No 357
>PLN03075 nicotianamine synthase; Provisional
Probab=94.72 E-value=0.36 Score=42.57 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCC-----ceeeCCCCCCchHHHHHHhhh--cCCc
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGV-----TEFVNPKDYDKPVQQVIADMT--NGGV 215 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~-----~~~~~~~~~~~~~~~~~~~~~--~~~~ 215 (329)
++++|+-+|+|+.++.++.+++.+ ...++++++.+++..+.++++-. ..-+.....+ ..+ .. .++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~----~~~~l~~F 196 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMD----VTESLKEY 196 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhh----cccccCCc
Confidence 778999999999999888888644 33389999999998888876431 1222222222 211 22 2479
Q ss_pred cEEEEec-------CCHHHHHHHHHhhccCCeEEEEec
Q 047713 216 DRSVECT-------GSVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 216 d~Vid~~-------g~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+||-.+ .....++...+.|+++ |.++.-.
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9998654 2345678888899997 8777654
No 358
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.72 E-value=0.15 Score=44.78 Aligned_cols=98 Identities=19% Similarity=0.157 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
+.++ .|.|+|.|.+|.-++.+|.-+|+ +|...+.+.+|+..+..+-...+-........+...++ +.|++|.+
T Consensus 166 V~~~-kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIga 238 (371)
T COG0686 166 VLPA-KVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGA 238 (371)
T ss_pred CCCc-cEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEE
Confidence 3444 56677999999999999999999 89999999999888876433332222221111333322 47888876
Q ss_pred cCC-----H-HHHHHHHHhhccCCeEEEEecc
Q 047713 222 TGS-----V-QAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 222 ~g~-----~-~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+=. + -..+..++.++++ +.++.+..
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAi 269 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAI 269 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCC-cEEEEEEE
Confidence 531 1 1356778899998 88888864
No 359
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.69 E-value=0.21 Score=42.66 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=46.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChh-hHHHH---HhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPS-RFNEA---KKFGVTEF---VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~-~~~~~---~~lg~~~~---~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ |.+|..++..+...|+ .|+.. ..++. ..+.+ ++.+.... .|..+.+ +..+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence 3678999986 9999999999988998 56553 33332 22223 33343322 2332221 23333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|++|++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 360
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.25 Score=42.48 Aligned_cols=72 Identities=21% Similarity=0.285 Sum_probs=44.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
+++++|+|+ |++|.++++.+...|+ +|+.+++++ +..+... .+... ..|..+ .. .+.+.. +++|++|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~----~~-~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK----EE-SLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC----HH-HHHHhc-CCCCEEEE
Confidence 689999986 9999999998888998 788777765 2222211 11111 122222 11 222222 36999999
Q ss_pred ecCC
Q 047713 221 CTGS 224 (329)
Q Consensus 221 ~~g~ 224 (329)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 361
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.69 E-value=0.22 Score=42.50 Aligned_cols=79 Identities=23% Similarity=0.289 Sum_probs=48.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.+.++||+|+ |.+|...+..+...|. +|+.++++.++... +++.+... . .|..+. .++.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR-AALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence 3678999986 9999999998888898 78888887554332 23233211 1 122221 123333333322 2
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|+||.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999988764
No 362
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.69 E-value=0.24 Score=42.93 Aligned_cols=79 Identities=25% Similarity=0.391 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++.+++|+|+ +.+|.+++..+...|+ +|+.+.+++++.+. +++.+... ..|..+. .+..+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDE-DGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhCC
Confidence 4789999986 9999999988888899 67777777765543 22334321 1233222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 363
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.69 E-value=0.24 Score=43.87 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
.+++++|+|+|++|.+++..+...|+++|+.+.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 478999999999999999888889997688888875
No 364
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.67 E-value=0.22 Score=42.68 Aligned_cols=77 Identities=26% Similarity=0.383 Sum_probs=48.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE---FVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+.++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.+ .+... ..|..+. +++.+.+.+... ++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCC
Confidence 357999987 9999999998888899 78888887766554432 22211 1233221 123333333321 36
Q ss_pred ccEEEEecC
Q 047713 215 VDRSVECTG 223 (329)
Q Consensus 215 ~d~Vid~~g 223 (329)
+|+||.+.|
T Consensus 79 ~d~vi~~a~ 87 (255)
T TIGR01963 79 LDILVNNAG 87 (255)
T ss_pred CCEEEECCC
Confidence 899988776
No 365
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.65 E-value=0.29 Score=41.98 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
+.+|+|.|+|++|..+++.+...|.++++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999998888877644
No 366
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.63 E-value=0.39 Score=37.49 Aligned_cols=32 Identities=31% Similarity=0.494 Sum_probs=28.2
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
+|+|.|+|++|..++..+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 47899999999999999999999888888765
No 367
>PRK06484 short chain dehydrogenase; Validated
Probab=94.63 E-value=0.22 Score=47.90 Aligned_cols=80 Identities=23% Similarity=0.302 Sum_probs=54.0
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTE---FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
..|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +++... ..|..+.+ +..+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 45789999986 9999999998888998 8888888877766544 344322 22333322 23333443332 369
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|++|++.|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999998874
No 368
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.62 E-value=0.35 Score=45.38 Aligned_cols=105 Identities=15% Similarity=0.280 Sum_probs=62.8
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhh-hc
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADM-TN 212 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~-~~ 212 (329)
....+++|++||=.|+|+ |..++.+++.++..+|++++.++++.+.++ ++|....+.....+ ... .... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d--~~~-~~~~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGD--GRG-PSQWAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccc--ccc-ccccccc
Confidence 345678899999887643 444555555554338999999999877653 45654211001111 000 0000 12
Q ss_pred CCccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713 213 GGVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 213 ~~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.+|.|| | |+|. ...+..++++|+++ |+++....
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 3699987 3 4442 23567788899998 99987754
No 369
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.60 E-value=0.25 Score=39.01 Aligned_cols=74 Identities=24% Similarity=0.291 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
.++.+++|+|+|.+|...++.+...|...|..++++.++.+. .++++... .....+ ..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence 457889999999999999998887764478888888776554 55555421 001111 1111 136899999
Q ss_pred ecCCH
Q 047713 221 CTGSV 225 (329)
Q Consensus 221 ~~g~~ 225 (329)
+++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98653
No 370
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.60 E-value=0.41 Score=38.36 Aligned_cols=87 Identities=16% Similarity=0.247 Sum_probs=57.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ 226 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~ 226 (329)
+|-++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.|+...-+ ..+.+++ .|+||-++...+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~s-------~~e~~~~-----~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVADS-------PAEAAEQ-----ADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEESS-------HHHHHHH-----BSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhhh-------hhhHhhc-----ccceEeecccch
Confidence 67888999999999998888899 8999999999998888877543321 3333332 589998887655
Q ss_pred HHHHHHH------hhccCCeEEEEecc
Q 047713 227 AMISAFE------CVHDGWGVAVLVGV 247 (329)
Q Consensus 227 ~~~~~~~------~l~~~~G~vv~~g~ 247 (329)
.....+. .+.++ ..++.++.
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCC
Confidence 5554433 24444 55665554
No 371
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.59 E-value=0.25 Score=42.54 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.+.++||+|+ +.+|..++..+...|+ +++.+++++++.+.+ ++.+... ..|..+.+ +..+.+..... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 3789999986 9999999998888899 677777766654432 2223221 22333221 23333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 372
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.58 E-value=0.2 Score=46.12 Aligned_cols=73 Identities=22% Similarity=0.309 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
.+.++||+|+|-+|..++.-+...|..+++.+.++.++.. +++++|+..+ ..++ ....+. .+|+||-++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~e----l~~~l~-----~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALEE----LLEALA-----EADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHHH----HHHhhh-----hCCEEEEec
Confidence 5889999999999999999999999878888877777654 5788984322 1111 222221 489999999
Q ss_pred CCHH
Q 047713 223 GSVQ 226 (329)
Q Consensus 223 g~~~ 226 (329)
+++.
T Consensus 247 sa~~ 250 (414)
T COG0373 247 SAPH 250 (414)
T ss_pred CCCc
Confidence 8654
No 373
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.57 E-value=0.71 Score=39.94 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=66.2
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-C
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-G 213 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~ 213 (329)
+.......++.+||=.|+|. |..+..+++.. +. +|++++.++...+.+++.+.+... .+ . .++.. +
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--V----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--h----hhCCCCC
Confidence 34556667889999988764 77777888765 45 899999999988888775543221 11 2 12222 3
Q ss_pred CccEEEEecC------CHHHHHHHHHhhccCCeEEEEe
Q 047713 214 GVDRSVECTG------SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 214 ~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+|+|+-... ....+....+.|+++ |.++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999985432 134567788889998 998765
No 374
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.56 E-value=0.13 Score=39.23 Aligned_cols=95 Identities=24% Similarity=0.341 Sum_probs=51.3
Q ss_pred eEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChh---hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 147 SVAIFGL-GAVGLAAAEGARV-SGASRIIGVDLNPS---RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~-~G~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
+|+|+|+ |-+|.++++.+.. .+.+-+-++++.++ ..+.-.-.|....-.. ....+.++... .|++||+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~------v~~~l~~~~~~-~DVvIDf 74 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVP------VTDDLEELLEE-ADVVIDF 74 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSB------EBS-HHHHTTH--SEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccc------cchhHHHhccc-CCEEEEc
Confidence 5889998 9999999999887 67744555555541 1111111221100000 00112332222 8999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGVPNK 250 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~~~ 250 (329)
+ .++.....++.+... |.-+.+|.+..
T Consensus 75 T-~p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 75 T-NPDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp S--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred C-ChHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 9 566666666655554 77777776543
No 375
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.52 E-value=0.47 Score=41.52 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C-ceeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-V-TEFVNPKDY---DKPVQQVIADMTNGGVDR 217 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~-~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 217 (329)
...++||+.|+|. |..+..+++....+++++++.+++-.+.++++- . ...++...- ..+..+.+++. .+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccE
Confidence 3456999998764 545666677665668999999988777776631 1 001110000 01133333332 347999
Q ss_pred EEEecC----------CHHHHHHHHHhhccCCeEEEEec
Q 047713 218 SVECTG----------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 218 Vid~~g----------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
|+-... ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 874221 234567888899998 9988763
No 376
>PRK12743 oxidoreductase; Provisional
Probab=94.50 E-value=0.26 Score=42.53 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=46.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH----HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFN----EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
++++||+|+ +.+|..+++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+. .+..+.+.++.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDL-PEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 568999986 9999999999988999 666653 4444332 233345322 1 233222 123333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999988873
No 377
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.49 E-value=0.35 Score=42.30 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=48.4
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNE-AKKFGVTEF--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~-~~~lg~~~~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
.++++||+|+ +++|.+++..+...|+ +|+.+.++++ +.+. .++++.... .|..+. ++..+.+.++..
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~ 86 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDE-ASIDAVFETLEKKW 86 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCH-HHHHHHHHHHHHhc
Confidence 5789999975 5899999998888999 7777665532 2222 234453222 233222 223334444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+++++.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 379999998873
No 378
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.49 E-value=0.22 Score=41.27 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=58.7
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhc
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
.......++.+||-.|+| .|..++.+++ .|. +|++++.++...+.+++. +.. +.....+ ... ... .
T Consensus 23 ~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d--~~~--~~~-~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDAYD--INA--AAL-N 92 (195)
T ss_pred HHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEecc--chh--ccc-c
Confidence 344444556788888875 3777777776 476 899999999877765442 222 1110001 100 011 2
Q ss_pred CCccEEEEecC--------CHHHHHHHHHhhccCCeEEEEec
Q 047713 213 GGVDRSVECTG--------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 213 ~~~d~Vid~~g--------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+.+|+|+...- ....+....+.|+++ |.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 36999875421 124567777889998 9865554
No 379
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.47 E-value=0.37 Score=41.51 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=29.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..++..+...|.+++..++.+
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888887664
No 380
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.44 E-value=0.52 Score=41.31 Aligned_cols=128 Identities=16% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC---------chHHHHHHhhhc
Q 047713 142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD---------KPVQQVIADMTN 212 (329)
Q Consensus 142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~---------~~~~~~~~~~~~ 212 (329)
-.++..+++.|.|.+|++++..++..|+ .|...+....+.+..+++|+...-...++. ++|...-.++..
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a 239 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA 239 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence 3466788999999999999999999999 888888888888888888875432222111 223333233332
Q ss_pred C---CccEEEEecCCH-----H-HHHHHHHhhccCCeEEEEeccCCC-CCccc-cccccccccceEEEee
Q 047713 213 G---GVDRSVECTGSV-----Q-AMISAFECVHDGWGVAVLVGVPNK-DDAFK-THPMNLLNERTLKGTF 271 (329)
Q Consensus 213 ~---~~d~Vid~~g~~-----~-~~~~~~~~l~~~~G~vv~~g~~~~-~~~~~-~~~~~~~~~~~~~g~~ 271 (329)
+ ++|+||-+.-.| . ......+.++++ ..++.+....+ +.... .......+.++++|..
T Consensus 240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 2 799999876321 1 245677789998 89998865333 22111 1222234678888754
No 381
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.41 E-value=0.31 Score=44.18 Aligned_cols=34 Identities=35% Similarity=0.448 Sum_probs=30.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5689999999999999999999999889999875
No 382
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.37 E-value=0.4 Score=40.79 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=29.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..++..+...|..++..++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888887654
No 383
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.37 E-value=0.21 Score=41.05 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=62.1
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+....+.++.+||=.|+|. |..++.+++.....+|++++.+++..+.+++ ++...+- ....+ .. ....
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~----~~~~ 95 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--AP----IELP 95 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--ch----hhcC
Confidence 3455677889999888754 6667777776543489999999987776653 3332211 11111 11 1112
Q ss_pred CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713 213 GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 213 ~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
+.+|+|+.... ....+..+.+.|+++ |+++..
T Consensus 96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 36999985321 234567788899998 988764
No 384
>PRK07574 formate dehydrogenase; Provisional
Probab=94.36 E-value=0.49 Score=43.57 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg 189 (329)
.|.+|.|+|.|.||+.+++.++.+|. +|++.+++....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 57899999999999999999999999 8999887653333333344
No 385
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.34 Score=43.19 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHH----HHHhcCCce---eeCCCCCCchHHH
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP----------SRFN----EAKKFGVTE---FVNPKDYDKPVQQ 205 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~----------~~~~----~~~~lg~~~---~~~~~~~~~~~~~ 205 (329)
.|+++||+|+ +++|.++++.+...|+ +|+.++++. ++.+ .++..+... ..|..+. ++..+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVP-EQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCH-HHHHH
Confidence 4789999986 9999999999988999 777777652 2222 233334321 1233222 12444
Q ss_pred HHHhhhc--CCccEEEEec-C
Q 047713 206 VIADMTN--GGVDRSVECT-G 223 (329)
Q Consensus 206 ~~~~~~~--~~~d~Vid~~-g 223 (329)
.+.+... +.+|++|++. |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 4444332 3699999887 5
No 386
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.33 E-value=0.16 Score=39.27 Aligned_cols=35 Identities=34% Similarity=0.423 Sum_probs=29.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
..+|+|.|+|++|..++..+...|..++..++.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999888998888887643
No 387
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.32 E-value=0.26 Score=42.67 Aligned_cols=78 Identities=13% Similarity=0.285 Sum_probs=47.1
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHH-HHhc-CCc---eeeCCCCCCchHHHHHHhhhc
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNP---SRFNE-AKKF-GVT---EFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~---~~~~~-~~~l-g~~---~~~~~~~~~~~~~~~~~~~~~ 212 (329)
.|++++|+|+ +++|.+++..+...|+ +|+.+.++. ++.+. .+++ +.. ...|..+. ++..+.+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence 4789999985 5999999998888999 777775432 23332 2333 211 12233332 224444444332
Q ss_pred --CCccEEEEecC
Q 047713 213 --GGVDRSVECTG 223 (329)
Q Consensus 213 --~~~d~Vid~~g 223 (329)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999998876
No 388
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.30 E-value=0.29 Score=41.93 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHH----HHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFN----EAKKFGVTEF---VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~-- 212 (329)
++.++||+|+ |.+|..++..+...|+ +|+. ..++.++.+ .+++.+.... .|..+. .+..+.+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV-EKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 3678999986 9999999999988998 5554 455554432 2233343221 222222 123333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 389
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.29 E-value=0.21 Score=43.11 Aligned_cols=75 Identities=21% Similarity=0.236 Sum_probs=46.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi 219 (329)
+|+++||+|+ |.+|..+++.+...|+ +|+.++++++... .-... ...|..+.+ +..+.+.++.. +++|++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAE-GCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4789999986 9999999998888899 7888877654321 00111 112332221 23333333222 3689999
Q ss_pred EecC
Q 047713 220 ECTG 223 (329)
Q Consensus 220 d~~g 223 (329)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 390
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.4 Score=42.26 Aligned_cols=80 Identities=25% Similarity=0.354 Sum_probs=48.2
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hhHH-HHH---hcCCcee---eCCCCCCchHHH
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP---------SRFN-EAK---KFGVTEF---VNPKDYDKPVQQ 205 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~---------~~~~-~~~---~lg~~~~---~~~~~~~~~~~~ 205 (329)
-+++++||+|+ +++|.+++..+...|+ +|+.++.+. ++.+ ..+ +.+.... .|..+.+ +..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence 35789999986 9999999998888898 677765543 2222 222 2333221 2332221 2333
Q ss_pred HHHhhhc--CCccEEEEecCC
Q 047713 206 VIADMTN--GGVDRSVECTGS 224 (329)
Q Consensus 206 ~~~~~~~--~~~d~Vid~~g~ 224 (329)
.+++... +.+|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3443322 479999998874
No 391
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.27 E-value=0.13 Score=42.11 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=56.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-cCCccEEE
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT-NGGVDRSV 219 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~Vi 219 (329)
+++||-.|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .....+ .. ++. .+.+|+|+
T Consensus 43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~----~~~~~~~fD~I~ 114 (181)
T TIGR00138 43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AE----DFQHEEQFDVIT 114 (181)
T ss_pred CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hh----hccccCCccEEE
Confidence 78899888753 566666666554348999999998766554 3443321 111111 21 122 23799987
Q ss_pred Eec-C-CHHHHHHHHHhhccCCeEEEEe
Q 047713 220 ECT-G-SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 220 d~~-g-~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
-.. . ....++.+.++|+++ |.++..
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 432 1 234556777889998 998866
No 392
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.27 E-value=0.33 Score=40.93 Aligned_cols=46 Identities=30% Similarity=0.388 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHhcC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP----------SRFNEAKKFG 189 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~----------~~~~~~~~lg 189 (329)
.|.+|+|.|.|.+|+.+++.+...|.+.|.+++.+. +..+..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 588999999999999999999999985566666666 5566555554
No 393
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.24 E-value=0.42 Score=40.19 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5689999999999999999999999888888876
No 394
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.24 E-value=0.62 Score=45.36 Aligned_cols=74 Identities=12% Similarity=0.208 Sum_probs=55.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713 146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
+.++|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.-...+ .+.+++..-+.+|.++-+++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~~----~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAAN----EEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCCC----HHHHHhcCccccCEEEEEcCC
Confidence 678999999999999999999998 89999999999999998886555432221 223444322378888777654
No 395
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.20 E-value=0.28 Score=41.71 Aligned_cols=105 Identities=16% Similarity=0.222 Sum_probs=64.1
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM 210 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~ 210 (329)
+.....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++. +.+.+- ....+ ... + ..
T Consensus 37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~ 110 (231)
T TIGR02752 37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PF 110 (231)
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CC
Confidence 34556778899999988763 6677778876542 3899999998877766542 221110 00001 110 0 11
Q ss_pred hcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713 211 TNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 211 ~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
..+.+|+|+-... ....+..+.+.|+++ |.++....
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 1237999874322 123567788899998 99987654
No 396
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.17 E-value=0.37 Score=42.18 Aligned_cols=92 Identities=20% Similarity=0.188 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC---ceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV---TEFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
.++++++|+|+|++|.+++..+...|. +|..+.+++++.+. ++++.. ..... .. +.....+|+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~----~~~~~~~Div 182 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MD----ELPLHRVDLI 182 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hh----hhcccCccEE
Confidence 457899999999999999988888897 88888888776543 344322 11111 11 1111258999
Q ss_pred EEecCCH--HHH---HHHHHhhccCCeEEEEecc
Q 047713 219 VECTGSV--QAM---ISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 219 id~~g~~--~~~---~~~~~~l~~~~G~vv~~g~ 247 (329)
|++++.. ... ......++++ ..++.+..
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9998752 111 1113345655 56666644
No 397
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.15 E-value=0.35 Score=41.85 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=47.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH-HHh----cCCc-e--eeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE-AKK----FGVT-E--FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~-~~~----lg~~-~--~~~~~~~~~~~~~~~~~~~~- 212 (329)
+++++||+|+ +++|.+++..+...|+ +|+.+. +++++.+. .++ .+.. . ..|..+. ++..+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP-ETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHh
Confidence 4789999987 9999999998888999 666654 34444332 222 2321 1 2233322 224344443332
Q ss_pred -CCccEEEEecC
Q 047713 213 -GGVDRSVECTG 223 (329)
Q Consensus 213 -~~~d~Vid~~g 223 (329)
+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 36899998875
No 398
>PRK08328 hypothetical protein; Provisional
Probab=94.12 E-value=0.43 Score=40.70 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=30.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
+.+|+|.|+|++|..++..+...|.+++..++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888888754
No 399
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.12 E-value=0.22 Score=39.89 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=37.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l 188 (329)
.|..|+++|+ -+||...++-+...|+ +|+++.+.++.+..+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence 4788999987 7899999999999999 999999999988765443
No 400
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.07 E-value=0.2 Score=43.51 Aligned_cols=76 Identities=18% Similarity=0.301 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi 219 (329)
.+.++||+|+ |.+|.+++..+...|+ +|+.++.++++.+. ..... ..|..+. .++.+.+.++.. +.+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 3678999986 9999999999988999 78887766544321 11111 1233222 123333333322 3689999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 401
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.07 E-value=0.15 Score=46.37 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=46.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCC----c-eeeCCCCCCchHHHHHHhhhcC-Cc
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGV----T-EFVNPKDYDKPVQQVIADMTNG-GV 215 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~----~-~~~~~~~~~~~~~~~~~~~~~~-~~ 215 (329)
+|.+|||+|+ |.+|..++..+...|. +|+++++++.... ..+.++. . ...|..+. ..+.++..+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence 4689999986 9999999999988898 7888876554322 2122221 1 11122221 223333334 68
Q ss_pred cEEEEecC
Q 047713 216 DRSVECTG 223 (329)
Q Consensus 216 d~Vid~~g 223 (329)
|+||++++
T Consensus 77 d~vih~A~ 84 (349)
T TIGR02622 77 EIVFHLAA 84 (349)
T ss_pred CEEEECCc
Confidence 99999987
No 402
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.05 E-value=0.42 Score=47.10 Aligned_cols=78 Identities=18% Similarity=0.300 Sum_probs=58.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
.++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++-..+ -.+.+++..-..+|.++-++..
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDAT----RMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCC----CHHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999998 8999999999999999988654432111 1223444333378999988876
Q ss_pred HHH
Q 047713 225 VQA 227 (329)
Q Consensus 225 ~~~ 227 (329)
++.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 443
No 403
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.04 E-value=0.45 Score=45.34 Aligned_cols=69 Identities=29% Similarity=0.317 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-----RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-----~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
.+++|+|.|+|.+|+.++..++..|. .|++++..+. ..+.+++.|.......... ...++|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence 47799999999999999999999999 7888875442 2344666676543322110 01247788
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
+.+.|.
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 777764
No 404
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.98 E-value=0.32 Score=42.81 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 143 KKGQSVAIFGLGA-VGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 143 ~~g~~VlI~Gag~-iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
-.|.+|+|.|.|. +|..++.++...|+ .|..+.+..+. +.+.+ ..+|+|+++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEEc
Confidence 4689999999876 99999999999999 78777542111 11111 248999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+|.+..+. .+.++++ ..++.++..
T Consensus 210 tG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 210 VGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred cCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 98765433 3458887 888888764
No 405
>KOG3010 consensus Methyltransferase [General function prediction only]
Probab=93.98 E-value=0.11 Score=43.71 Aligned_cols=103 Identities=20% Similarity=0.241 Sum_probs=64.3
Q ss_pred hhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--
Q 047713 137 VNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-- 213 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-- 213 (329)
...+...++.++++- |+|+ |+++..+|-+ .+.|++++.+++.++.+++.-...- .+.......+.+..+.++
T Consensus 25 ~~ia~~~~~h~~a~DvG~G~-Gqa~~~iae~--~k~VIatD~s~~mL~~a~k~~~~~y--~~t~~~ms~~~~v~L~g~e~ 99 (261)
T KOG3010|consen 25 KKIASRTEGHRLAWDVGTGN-GQAARGIAEH--YKEVIATDVSEAMLKVAKKHPPVTY--CHTPSTMSSDEMVDLLGGEE 99 (261)
T ss_pred HHHHhhCCCcceEEEeccCC-CcchHHHHHh--hhhheeecCCHHHHHHhhcCCCccc--ccCCccccccccccccCCCc
Confidence 345666777776655 6654 6887777777 3589999999999998877432111 111111122334455544
Q ss_pred CccEEEEecC-----CHHHHHHHHHhhccCCeEEEEe
Q 047713 214 GVDRSVECTG-----SVQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 214 ~~d~Vid~~g-----~~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+|+|+-+-. .+..++.+-+.|++. |.++.+
T Consensus 100 SVDlI~~Aqa~HWFdle~fy~~~~rvLRk~-Gg~iav 135 (261)
T KOG3010|consen 100 SVDLITAAQAVHWFDLERFYKEAYRVLRKD-GGLIAV 135 (261)
T ss_pred ceeeehhhhhHHhhchHHHHHHHHHHcCCC-CCEEEE
Confidence 7999874322 345677888899998 744444
No 406
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.95 E-value=0.25 Score=42.35 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=50.8
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce--e--eCCCC-CCchHHHHHHhh
Q 047713 141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE--F--VNPKD-YDKPVQQVIADM 210 (329)
Q Consensus 141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~--~--~~~~~-~~~~~~~~~~~~ 210 (329)
...++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+. +++.+... + .+... ...++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457899999986 9999999998888898 78888887765432 23333221 1 12221 111233333333
Q ss_pred hc--CCccEEEEecCC
Q 047713 211 TN--GGVDRSVECTGS 224 (329)
Q Consensus 211 ~~--~~~d~Vid~~g~ 224 (329)
.. +.+|+||.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 368999988763
No 407
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.93 E-value=0.57 Score=39.80 Aligned_cols=73 Identities=21% Similarity=0.330 Sum_probs=54.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH--hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK--KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
.++|.|+|.+|...++.+...|. .|+.++.++++.+... ++....+.-... -.+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t----~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDAT----DEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecCC----CHHHHHhcCCCcCCEEEEeeCC
Confidence 57888999999999999999998 8999999999877733 365544432222 2345566533489999988876
No 408
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=93.89 E-value=1.1 Score=39.46 Aligned_cols=112 Identities=16% Similarity=0.079 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C----ceeeCCCCCC--chHHHHHHhhhc
Q 047713 141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-V----TEFVNPKDYD--KPVQQVIADMTN 212 (329)
Q Consensus 141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~----~~~~~~~~~~--~~~~~~~~~~~~ 212 (329)
..-+++.|+|+|+ ++.|...+.-+...|. .|++..-.++..+.++..- . +-..|..+.+ ....+.+++..+
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 3456778999998 9999999998888999 7877766666555443221 1 1122332221 124445556555
Q ss_pred C-CccEEEEecCCH--------------------------HHHHHHHHhhccCCeEEEEeccCCCCCc
Q 047713 213 G-GVDRSVECTGSV--------------------------QAMISAFECVHDGWGVAVLVGVPNKDDA 253 (329)
Q Consensus 213 ~-~~d~Vid~~g~~--------------------------~~~~~~~~~l~~~~G~vv~~g~~~~~~~ 253 (329)
. +.-.+++++|.. +.....+.++++..||++.++...+...
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA 171 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence 5 778888888721 2233444566655699999987665433
No 409
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.89 E-value=0.26 Score=42.93 Aligned_cols=105 Identities=15% Similarity=0.172 Sum_probs=66.6
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCC
Q 047713 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGG 214 (329)
Q Consensus 136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (329)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... ..+.....+ +.. .....+.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 45667888999999998763 5566777777777 899999999888877764221 111111111 110 0111237
Q ss_pred ccEEEEec--------CCHHHHHHHHHhhccCCeEEEEecc
Q 047713 215 VDRSVECT--------GSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 215 ~d~Vid~~--------g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
||+|+..- .....+..+.+.|+|+ |.++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 99998521 1134567778899998 99987754
No 410
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.89 E-value=0.39 Score=44.24 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
.+.+|+|.|+|++|..++..+...|..++..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46789999999999999999999999889888876
No 411
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.88 E-value=0.59 Score=42.73 Aligned_cols=97 Identities=15% Similarity=0.282 Sum_probs=61.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhh-HHHHHhcCCceeeCCCCCC-chH--------------H
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVS--GASRIIGVD--LNPSR-FNEAKKFGVTEFVNPKDYD-KPV--------------Q 204 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~--~~~~~-~~~~~~lg~~~~~~~~~~~-~~~--------------~ 204 (329)
++|.|.|+ |.||..++++.+.. .. +|++++ .+.++ .+++++++...++..++.. ..+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47889997 99999999988755 34 666664 33333 3467788887665443211 001 1
Q ss_pred HHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713 205 QVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 205 ~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~ 244 (329)
+.+.++... .+|+|+.++++...+.-.+..++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122233333 6899999998777788888888764 44444
No 412
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.86 E-value=0.49 Score=36.19 Aligned_cols=88 Identities=15% Similarity=0.298 Sum_probs=50.8
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCCh--hh-HHHHHhcCCceeeCCCCCCchHHHHHH--------------
Q 047713 148 VAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNP--SR-FNEAKKFGVTEFVNPKDYDKPVQQVIA-------------- 208 (329)
Q Consensus 148 VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~-------------- 208 (329)
|.|.|+ |.||..++++.+...-+ +|++.+... ++ .+++++|....++..++. ....++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~---~~~~l~~~~~~~~~~~~v~~ 77 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEE---AYEELKKALPSKGPGIEVLS 77 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHH---HHHHHHHHHHHTTSSSEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH---HHHHHHHHhhhcCCCCEEEe
Confidence 567898 99999999999988722 566655432 22 345778888776654432 122222
Q ss_pred ------hhhc-CCccEEEEecCCHHHHHHHHHhhccC
Q 047713 209 ------DMTN-GGVDRSVECTGSVQAMISAFECVHDG 238 (329)
Q Consensus 209 ------~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~ 238 (329)
++.. ..+|+|+.++-+-..+.-.+..+..+
T Consensus 78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 2222 25677776665555666666666653
No 413
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.85 E-value=0.45 Score=42.22 Aligned_cols=57 Identities=18% Similarity=0.120 Sum_probs=46.2
Q ss_pred hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceeeC
Q 047713 138 NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL---NPSRFNEAKKFGVTEFVN 195 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~---~~~~~~~~~~lg~~~~~~ 195 (329)
....+.||.++||-.. |++|...+.++...|+ +++.+-. +.||...++.||+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3457899999999975 9999999999999999 6666644 457888899999876553
No 414
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.84 E-value=1.4 Score=37.62 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=44.5
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhH-H---HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRF-N---EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~-~---~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+.++||+|+ |.+|.+.+.-+...|+ +++.+. .+.++. + .+++.+... . .|..+.+ +..+.+.++.. +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence 678999986 9999999998888998 555443 332222 2 233333321 1 2332211 23333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|+||.+.|
T Consensus 84 ~~d~vi~~ag 93 (252)
T PRK06077 84 VADILVNNAG 93 (252)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 415
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.83 E-value=3.1 Score=35.19 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN--PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
++.+|||.|+|.++.-=+..+...|+ +|.+++.. ++-.++.+ .+.-..+ ..+.. . .. + .++++||-+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~-~~~i~~~-~r~~~--~-~d---l--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKK-YGNLKLI-KGNYD--K-EF---I--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHh-CCCEEEE-eCCCC--h-HH---h--CCCcEEEEC
Confidence 47899999999999888888888898 67777543 22222222 2221111 11211 0 01 1 368999999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
++.+..-+......+.. +.++....
T Consensus 93 TdD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 93 TDDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 97654444444455554 65555543
No 416
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.49 Score=41.37 Aligned_cols=77 Identities=25% Similarity=0.359 Sum_probs=47.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhh-cCCcc
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMT-NGGVD 216 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~-~~~~d 216 (329)
+++++|+|+|++|.+++..+. .|. +|+.+++++++.+.+ ++ .+... ..|..+.+ +..+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence 357888898999999998875 788 788888877655432 22 23221 12333321 2333333321 13799
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|++.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
No 417
>PRK06101 short chain dehydrogenase; Provisional
Probab=93.80 E-value=0.34 Score=41.35 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=46.6
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c-eeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T-EFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~-~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+. . ...|..+. +++.+.+++.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence 46899986 9999998888888899 78888888877766544332 1 12233322 12444444332 235666655
Q ss_pred cC
Q 047713 222 TG 223 (329)
Q Consensus 222 ~g 223 (329)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 418
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.80 E-value=0.043 Score=43.31 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=55.4
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC----CchHHHHHHhhhcCCccEEEEecC
Q 047713 148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY----DKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~----~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
|+|.|+|.+|...+..++..|. .|..+.+.+ +.+.+++-|........+. ....... ....+.+|+||-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6788999999999998888888 788888777 7777776664322211000 0000000 112237999999985
Q ss_pred CHHHHHHHHH----hhccCCeEEEEecc
Q 047713 224 SVQAMISAFE----CVHDGWGVAVLVGV 247 (329)
Q Consensus 224 ~~~~~~~~~~----~l~~~~G~vv~~g~ 247 (329)
+. ....+++ .+.+. ..++.+..
T Consensus 77 a~-~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AY-QLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GG-GHHHHHHHHCTGEETT-EEEEEESS
T ss_pred cc-chHHHHHHHhhccCCC-cEEEEEeC
Confidence 43 3333434 44454 56776654
No 419
>PLN02244 tocopherol O-methyltransferase
Probab=93.78 E-value=0.54 Score=42.66 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
+++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++. +...-+.....+ ..+ .....+.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~--~~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN--QPFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc--CCCCCCCccEE
Confidence 6788999888763 6677788887787 899999999877766543 321111111111 100 01122379999
Q ss_pred EEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713 219 VECTG------SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 219 id~~g------~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+-... ....+....+.|+++ |+++....
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 75322 124567888899998 99888754
No 420
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.71 E-value=0.64 Score=38.59 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..++..+...|.+++..++.+
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 5789999999999999999999999888888764
No 421
>PLN03139 formate dehydrogenase; Provisional
Probab=93.68 E-value=0.7 Score=42.54 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=35.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg 189 (329)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 58899999999999999999999999 8888887643333334444
No 422
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.65 E-value=0.51 Score=40.92 Aligned_cols=79 Identities=22% Similarity=0.358 Sum_probs=47.6
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHH-HHhcCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLN---PSRFNE-AKKFGVTE--FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~---~~~~~~-~~~lg~~~--~~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ +++|.+++..+...|+ +|+.+.+. +++.+. .++++... ..|..+.+ +..+.+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence 4789999983 6899999998888998 67766433 233322 23344322 22333222 24444444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998873
No 423
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.64 E-value=0.44 Score=41.24 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=45.4
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC------hhhHHHHHhcCCc-ee--eCCCCCCchHHHHHHhhh
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLN------PSRFNEAKKFGVT-EF--VNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~------~~~~~~~~~lg~~-~~--~~~~~~~~~~~~~~~~~~ 211 (329)
.|++++|+|+ +++|.+++..+...|+ +|+.+..+ ++..+.+++.+.. .. .|..+.+ +..+.+++..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDA-QIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHH-HHHHHHHHHH
Confidence 4789999985 5899999998888999 66655332 1222223222211 11 2332221 2333333332
Q ss_pred c--CCccEEEEecCC
Q 047713 212 N--GGVDRSVECTGS 224 (329)
Q Consensus 212 ~--~~~d~Vid~~g~ 224 (329)
. +.+|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2 379999998873
No 424
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.55 Score=41.01 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=48.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~ 213 (329)
+..+++|+|+ |.+|.+++..+...|+ +|+.+.++.++.+. ++..+.... .|..+. ++..+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP-DSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence 3468999986 9999999998888898 77777776655432 222333221 233221 12333333322 13
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999988874
No 425
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.45 Score=41.36 Aligned_cols=76 Identities=26% Similarity=0.344 Sum_probs=46.9
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713 147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD 216 (329)
Q Consensus 147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d 216 (329)
++||+|+ |.+|...+..+...|. +|+.++++.++.+. ++..+.... .|..+. .++.+.+.+... +++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence 6899987 9999999998888899 78888877766443 222332221 122221 122333332221 3699
Q ss_pred EEEEecCC
Q 047713 217 RSVECTGS 224 (329)
Q Consensus 217 ~Vid~~g~ 224 (329)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999874
No 426
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.49 Score=40.26 Aligned_cols=78 Identities=24% Similarity=0.360 Sum_probs=46.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNEA----KKFGVTE-F--VNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~ 213 (329)
+.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+ +..+... + .|..+. .++.+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE-EDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence 568999986 9999999988777898 67777 7776654332 2222211 1 122221 123333333222 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999988864
No 427
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.61 E-value=0.71 Score=41.49 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=60.1
Q ss_pred eEEEEcCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHhcCCcee--------------eCCCCCCchHHHH
Q 047713 147 SVAIFGLGAVGLAAAEGARVSG----ASRIIGVDL--NPSRFNEAKKFGVTEF--------------VNPKDYDKPVQQV 206 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G----~~~vv~~~~--~~~~~~~~~~lg~~~~--------------~~~~~~~~~~~~~ 206 (329)
+|.|.|.|.+|...++.+...+ . .|+++.. +.+...++.++...+- ++-..-.-.-.+.
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4788999999999999887653 4 5555532 3334445544443110 0000000000001
Q ss_pred HHhhh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 207 IADMT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 207 ~~~~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
..++. .+ ++|+||+|+|.....+.+...+..+ ++.+.++.+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 22222 22 8999999999877778888889887 888888765
No 428
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.61 E-value=0.47 Score=44.10 Aligned_cols=74 Identities=22% Similarity=0.309 Sum_probs=46.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cce-eeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG--VTE-FVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg--~~~-~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
++++++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.. .... ... ..|..+. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence 4789999987 9999999998888898 788887776654322 1111 111 1222221 1233322 369999
Q ss_pred EEecCC
Q 047713 219 VECTGS 224 (329)
Q Consensus 219 id~~g~ 224 (329)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988763
No 429
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.59 E-value=1.3 Score=36.93 Aligned_cols=98 Identities=20% Similarity=0.209 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cCCccEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~V 218 (329)
++.+||-.|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ....+ ....+.... .+.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence 567888888864 7777788877644489999999988877654 2322211 11112 322333222 3378988
Q ss_pred EEecC--------------CHHHHHHHHHhhccCCeEEEEec
Q 047713 219 VECTG--------------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 219 id~~g--------------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+-... ....++.+.+.|+++ |.++...
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 75332 235678888899998 9988763
No 430
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.46 Score=41.48 Aligned_cols=79 Identities=25% Similarity=0.344 Sum_probs=47.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------H----HHHHhcCCce---eeCCCCCCchHHHHHH
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-------F----NEAKKFGVTE---FVNPKDYDKPVQQVIA 208 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-------~----~~~~~lg~~~---~~~~~~~~~~~~~~~~ 208 (329)
.+.++||+|+ |.+|..++..+...|+ +|+.++++.+. . +.++..+... ..|..+. ++..+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE-DQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHH
Confidence 4678999986 9999999998888898 78877765432 1 1122333321 1233222 12333333
Q ss_pred hhhc--CCccEEEEecCC
Q 047713 209 DMTN--GGVDRSVECTGS 224 (329)
Q Consensus 209 ~~~~--~~~d~Vid~~g~ 224 (329)
+... +.+|++|++.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 3221 369999998874
No 431
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.59 E-value=0.59 Score=45.90 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=57.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713 146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV 225 (329)
Q Consensus 146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~ 225 (329)
+.|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++-... -.+.+++..-..+|.++-+.+.+
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDAT----QLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCC----CHHHHHhcCCccCCEEEEEeCCH
Confidence 578889999999999999999998 8999999999999999988654432211 12234443333789999888764
Q ss_pred HH
Q 047713 226 QA 227 (329)
Q Consensus 226 ~~ 227 (329)
+.
T Consensus 476 ~~ 477 (601)
T PRK03659 476 ED 477 (601)
T ss_pred HH
Confidence 43
No 432
>PRK09135 pteridine reductase; Provisional
Probab=93.58 E-value=0.57 Score=39.89 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=46.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HhcCC--c--eeeCCCCCCchHHHHHHhhhc-
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFNEA----KKFGV--T--EFVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~~~----~~lg~--~--~~~~~~~~~~~~~~~~~~~~~- 212 (329)
.+.++||+|+ |.+|..++..+...|+ +|+.++++ +++.+.+ ++... . ...|..+.+ .+...+++...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPD-ALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence 4578999987 9999999998888898 78887764 3333222 22211 1 122332221 23333333221
Q ss_pred -CCccEEEEecC
Q 047713 213 -GGVDRSVECTG 223 (329)
Q Consensus 213 -~~~d~Vid~~g 223 (329)
+++|+||.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 36899999987
No 433
>PRK08223 hypothetical protein; Validated
Probab=93.54 E-value=0.41 Score=41.99 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=30.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
..+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 57899999999999999999999998888887653
No 434
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.51 E-value=0.5 Score=40.53 Aligned_cols=77 Identities=25% Similarity=0.290 Sum_probs=47.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
++++|+|+ |.+|..+++.+...|+ +|+.+.+++++.+. +++.+... ..|..+.+ +..+.+.+... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence 36899986 9999999998888998 78888777654432 22333221 12332221 23333333322 268
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 435
>PLN03013 cysteine synthase
Probab=93.51 E-value=1.7 Score=40.63 Aligned_cols=57 Identities=23% Similarity=0.187 Sum_probs=42.7
Q ss_pred hccCCCCCCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHhcCCceee
Q 047713 138 NVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVD--LNPSRFNEAKKFGVTEFV 194 (329)
Q Consensus 138 ~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~--~~~~~~~~~~~lg~~~~~ 194 (329)
+...+.+|.+.+|.. +|+.|++.+..++.+|++-++++. .++++.+.++.+|++.+.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 455667886666665 599999999999999995444433 256788899999986554
No 436
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.49 E-value=0.63 Score=38.15 Aligned_cols=78 Identities=24% Similarity=0.325 Sum_probs=51.0
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCC--ce-ee--CCCCCCchHHHHHHhhhc--CCc
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGV--TE-FV--NPKDYDKPVQQVIADMTN--GGV 215 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~--~~-~~--~~~~~~~~~~~~~~~~~~--~~~ 215 (329)
.+..+|+|+ ++||.+..|.+...|+ +|.+.+.+.+. .+.++.|+. ++ .+ |..+. .+....+++... +.+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a-~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKA-HDVQNTLEEMEKSLGTP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCCccceeeeccCcH-HHHHHHHHHHHHhcCCC
Confidence 345677765 9999999999999999 78888776554 445777775 22 11 22221 123333444432 378
Q ss_pred cEEEEecCC
Q 047713 216 DRSVECTGS 224 (329)
Q Consensus 216 d~Vid~~g~ 224 (329)
+++++|.|.
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999984
No 437
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.48 E-value=0.25 Score=41.10 Aligned_cols=34 Identities=35% Similarity=0.531 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999888888877
No 438
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.46 E-value=0.63 Score=41.13 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=62.6
Q ss_pred ccccccchhhhhhhccCC-CCCCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHhcCCceeeCCCCCCc
Q 047713 125 LSCGISTGFGATVNVAKP-KKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVD-LNPSRFNEAKKFGVTEFVNPKDYDK 201 (329)
Q Consensus 125 ~~~~~~ta~~~l~~~~~~-~~g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~-~~~~~~~~~~~lg~~~~~~~~~~~~ 201 (329)
+||+....+. +++...+ -.|++|+|+| ++.+|.-.+.++...|+ .|.+.. ++..
T Consensus 138 ~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 138 VPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------- 194 (296)
T ss_pred cCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC---------------------
Confidence 4554333332 3444443 4699999999 69999999999998898 787773 2211
Q ss_pred hHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 202 PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 202 ~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+.+..+ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 -l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 -LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred -HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 111111 3799999999877666554 8887 888888864
No 439
>PRK04266 fibrillarin; Provisional
Probab=93.45 E-value=0.67 Score=39.36 Aligned_cols=102 Identities=19% Similarity=0.179 Sum_probs=59.5
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c--eeeCCCCCCchHHHHHHhhhcC
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T--EFVNPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~--~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
+...+++|++||=.|+|. |..+..+++..+..+|++++.+++..+.+.+... . ..+. .+.. .. .....+ .+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~-~D~~-~~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPIL-ADAR-KP-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEE-CCCC-Cc-chhhhc-cc
Confidence 346889999999888653 4455666666543389999999987664433211 1 1110 0110 00 000111 13
Q ss_pred CccEEEEecCCHH----HHHHHHHhhccCCeEEEEe
Q 047713 214 GVDRSVECTGSVQ----AMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 214 ~~d~Vid~~g~~~----~~~~~~~~l~~~~G~vv~~ 245 (329)
.+|+|+.....+. .++.+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999985443321 356777899998 998874
No 440
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.43 E-value=1.2 Score=37.56 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=60.0
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeC-------CCCCC-chHHHHHHhhh
Q 047713 141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVN-------PKDYD-KPVQQVIADMT 211 (329)
Q Consensus 141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~-------~~~~~-~~~~~~~~~~~ 211 (329)
.+.++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+ ++.+...... +.... .-+...+.++.
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 44567899999887 4788888886 688 899999999887764 3333221100 00000 00000011111
Q ss_pred ---cCCccEEEEecC----C----HHHHHHHHHhhccCCeEEEEe
Q 047713 212 ---NGGVDRSVECTG----S----VQAMISAFECVHDGWGVAVLV 245 (329)
Q Consensus 212 ---~~~~d~Vid~~g----~----~~~~~~~~~~l~~~~G~vv~~ 245 (329)
.+.+|.|+|..- . ...++...++|+++ |++..+
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 126899998652 1 23477788899998 875554
No 441
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.43 E-value=1.1 Score=38.68 Aligned_cols=97 Identities=23% Similarity=0.230 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~V 218 (329)
.++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++. |...-+.....+ ..+ +.....+.+|+|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~~-l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQD-IAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HHH-HhhhcCCCCCEE
Confidence 4567888888763 7778888875 66 899999999988877653 221101111111 211 222223479999
Q ss_pred EEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713 219 VECTG------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 219 id~~g------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+-... ....+..+.+.|+++ |.++.+.
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 84321 224577888899998 9987663
No 442
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.43 E-value=0.78 Score=39.09 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=31.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~ 184 (329)
.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 47899986 9999999998888898 78888888776543
No 443
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.42 E-value=0.58 Score=38.00 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=28.7
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 488999999999999998889998888888765
No 444
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.40 E-value=0.59 Score=39.67 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=44.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCc-e--eeCCCCCCchHHHHHHhhhc--C
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFNEA----KKFGVT-E--FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~~~----~~lg~~-~--~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
..++||+|+ |.+|..++..+...|. .|+. +.++++..+.+ +..+.. . ..|..+. .++.+.+.+... +
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK-AALEAAVAAAVERFG 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCH-HHHHHHHHHHHHHcC
Confidence 468999987 9999999999888898 5555 44444333222 222321 1 1232222 123333333322 3
Q ss_pred CccEEEEecC
Q 047713 214 GVDRSVECTG 223 (329)
Q Consensus 214 ~~d~Vid~~g 223 (329)
++|+||.+.|
T Consensus 84 ~id~vi~~ag 93 (249)
T PRK12825 84 RIDILVNNAG 93 (249)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 445
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.34 E-value=0.71 Score=39.89 Aligned_cols=79 Identities=15% Similarity=0.260 Sum_probs=47.7
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHH-HHHhcCCc---eeeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNP--SRFN-EAKKFGVT---EFVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~--~~~~-~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~-- 212 (329)
.+++++|+|+ +++|.+++..+...|+ +|+.++++. +..+ ..++++.. ...|..+.+ +..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEE-HLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHH-HHHHHHHHHHHHc
Confidence 4789999974 7999999998888999 787776542 3323 33344421 122332221 23333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998874
No 446
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.30 E-value=0.63 Score=40.09 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=46.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HH---hcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE-AK---KFGVTE---FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~-~~---~lg~~~---~~~~~~~~~~~~~~~~~~~~-- 212 (329)
.+.++||+|+ |.+|..++..+...|+ .|+.+.. +.++.+. .+ ..+... ..|..+.. +..+.+.+...
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEA-EVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 4678999987 9999999998888898 6655443 3333322 22 223321 12333221 23333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 369999999873
No 447
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=93.30 E-value=0.28 Score=43.10 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
..+.+++|+|+|++|.+++..+...|+.+|+.+.++.++.+.+ ++++....+.. +.+ .. +. -..+|+||++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~----~~-~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQ----EE-LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--ch----hc-cccCCEEEEC
Confidence 3578999999999999999999999966899999988876544 34432110111 000 10 10 1258999999
Q ss_pred cCCHHH-----HHHHHHhhccCCeEEEEec
Q 047713 222 TGSVQA-----MISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 222 ~g~~~~-----~~~~~~~l~~~~G~vv~~g 246 (329)
+...-. .....+.+.+. ..++.+-
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 864210 01223455554 5565554
No 448
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.29 E-value=0.52 Score=41.47 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=44.6
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCcee-----eCCCCCCchHHHHHHhhhcC-Cc
Q 047713 148 VAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVTEF-----VNPKDYDKPVQQVIADMTNG-GV 215 (329)
Q Consensus 148 VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~~~-----~~~~~~~~~~~~~~~~~~~~-~~ 215 (329)
|||+|+ |.+|...+.-+...+.++++.++.++.++..++ ++ ....+ ...-+-. -.+.+..+... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence 799986 999999999888888889999999998876543 34 11111 0111111 23455666555 89
Q ss_pred cEEEEecC
Q 047713 216 DRSVECTG 223 (329)
Q Consensus 216 d~Vid~~g 223 (329)
|+||.++.
T Consensus 79 diVfHaAA 86 (293)
T PF02719_consen 79 DIVFHAAA 86 (293)
T ss_dssp SEEEE---
T ss_pred CEEEEChh
Confidence 99999875
No 449
>PLN00203 glutamyl-tRNA reductase
Probab=93.29 E-value=0.41 Score=45.88 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=50.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g 223 (329)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+ .+++...+. ... +. .+.+.. ...|+||.+++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~~----~~-dl~~al-~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YKP----LD-EMLACA-AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-eec----Hh-hHHHHH-hcCCEEEEccC
Confidence 68999999999999999999989987898998888876554 445321110 101 11 112211 25899999987
Q ss_pred CHH
Q 047713 224 SVQ 226 (329)
Q Consensus 224 ~~~ 226 (329)
++.
T Consensus 339 s~~ 341 (519)
T PLN00203 339 SET 341 (519)
T ss_pred CCC
Confidence 543
No 450
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.25 E-value=0.62 Score=39.84 Aligned_cols=77 Identities=21% Similarity=0.200 Sum_probs=45.0
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH-HHhcCCce-e--eCCCCCCchHHHHHHhh---hcCCc
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE-AKKFGVTE-F--VNPKDYDKPVQQVIADM---TNGGV 215 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~-~~~lg~~~-~--~~~~~~~~~~~~~~~~~---~~~~~ 215 (329)
+.++||+|+ |.+|..++..+...|+ +|+.+ .+++++.+. ..+++... . .|..+. .++.+.+.+. .+.++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDR-EQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHhCCCC
Confidence 578999986 9999999998888898 56554 334444333 33343211 1 233221 1233333332 22249
Q ss_pred cEEEEecC
Q 047713 216 DRSVECTG 223 (329)
Q Consensus 216 d~Vid~~g 223 (329)
|++|.+.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99998875
No 451
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=93.24 E-value=0.53 Score=40.96 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=64.9
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcC-------CceeeCCCCCCchHHHHHHh
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFG-------VTEFVNPKDYDKPVQQVIAD 209 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~ 209 (329)
....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++.. ...+ ..... .+.+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~------d~~~ 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG------DATD 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc------cccc
Confidence 345678899999998753 5667777776652 38999999999888775421 1110 00000 0111
Q ss_pred h--hcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEeccC
Q 047713 210 M--TNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 210 ~--~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
+ ..+.+|.|+-..+ ....+....+.|+++ |+++.+...
T Consensus 139 lp~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 139 LPFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred CCCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 1 1236999875432 234578888999998 999887654
No 452
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.24 E-value=0.57 Score=40.34 Aligned_cols=76 Identities=13% Similarity=0.119 Sum_probs=46.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc--CCcee-eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF--GVTEF-VNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l--g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
.+.+|||+|+ |.+|..++..+...|. .|+++.+++++....... +...+ .|..+. . ..+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~-~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---S-DKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC---H-HHHHHHhhcCCCEEE
Confidence 3679999987 9999999998888888 788887777654332211 12211 233221 1 122222222689999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
.+.|.
T Consensus 91 ~~~g~ 95 (251)
T PLN00141 91 CATGF 95 (251)
T ss_pred ECCCC
Confidence 88764
No 453
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.21 E-value=0.89 Score=39.95 Aligned_cols=66 Identities=21% Similarity=0.294 Sum_probs=47.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS 224 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~ 224 (329)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|..... ..+ . +.+ ...|+||.|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~~~--~-~~~-----~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---STD--L-SLL-----KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---cCC--H-hHh-----cCCCEEEEcCCH
Confidence 57888999999988888887887 899999999888888777642111 111 1 111 247899988853
No 454
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.20 E-value=0.68 Score=41.25 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=46.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhH----HHHHhcCCceee---CCCCCCchHHHHHHhhh-cC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRF----NEAKKFGVTEFV---NPKDYDKPVQQVIADMT-NG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~----~~~~~lg~~~~~---~~~~~~~~~~~~~~~~~-~~ 213 (329)
.|+++||+|+ +++|.+.+..+...|+ +|+.++.. .++. +.++..|..... |..+.+ ...+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~-~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRA-TADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHhC
Confidence 4789999986 9999999998888899 67777653 2222 223333432211 222211 1222222211 24
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|++.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 455
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.19 E-value=0.54 Score=40.17 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=44.3
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--CC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+++||+|+ |.+|..+++.+...|+ +|+.+ .+++++.+. ++..+... . .|..+. .+..+.+.++.. ++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE-ADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH-HHHHHHHHHHHHhcCC
Confidence 47999986 9999999998888898 55544 445444332 22233221 1 122221 123333333322 36
Q ss_pred ccEEEEecC
Q 047713 215 VDRSVECTG 223 (329)
Q Consensus 215 ~d~Vid~~g 223 (329)
+|++|.++|
T Consensus 81 id~li~~ag 89 (248)
T PRK06947 81 LDALVNNAG 89 (248)
T ss_pred CCEEEECCc
Confidence 999998887
No 456
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.18 E-value=2.2 Score=30.40 Aligned_cols=85 Identities=22% Similarity=0.381 Sum_probs=53.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcC---CCEEE-EEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 147 SVAIFGLGAVGLAAAEGARVSG---ASRII-GVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G---~~~vv-~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
+|.++|+|.+|.+.+.-+...| . +++ ..++++++.+.+ ++++...... + ..+.+++ .|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~--~----~~~~~~~-----advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD--D----NEEAAQE-----ADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE--E----HHHHHHH-----TSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC--C----hHHhhcc-----CCEEEEE
Confidence 4667799999999999888888 5 666 548888887665 6666433221 1 2333332 6999999
Q ss_pred cCCHHHHHHHHHhh---ccCCeEEEEe
Q 047713 222 TGSVQAMISAFECV---HDGWGVAVLV 245 (329)
Q Consensus 222 ~g~~~~~~~~~~~l---~~~~G~vv~~ 245 (329)
+- +..+...++.+ .++ ..++.+
T Consensus 69 v~-p~~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VK-PQQLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S--GGGHHHHHHHHHHHHTT-SEEEEE
T ss_pred EC-HHHHHHHHHHHhhccCC-CEEEEe
Confidence 94 45555555443 343 455544
No 457
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.16 E-value=0.66 Score=41.51 Aligned_cols=37 Identities=14% Similarity=0.123 Sum_probs=29.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR 181 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~ 181 (329)
.|.+|||+|+ |.+|..++..+...|. +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4789999986 9999999998888898 77766665543
No 458
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.13 E-value=0.7 Score=39.23 Aligned_cols=79 Identities=23% Similarity=0.310 Sum_probs=45.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHH-H---HHhcCCce-ee--CCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-RFN-E---AKKFGVTE-FV--NPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~~~-~---~~~lg~~~-~~--~~~~~~~~~~~~~~~~~~-- 212 (329)
++.++||+|+ |.+|..++..+...|+ .|+.+.++.. +.+ . ++..+... .+ |..+.+ ++.+.+++...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 3578999986 9999999999988899 5655544433 222 1 22223221 11 332221 23333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|.||.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999988863
No 459
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.12 E-value=0.88 Score=42.14 Aligned_cols=80 Identities=21% Similarity=0.298 Sum_probs=48.5
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHhc-CCcee-eCCCCCCchHHHHHHhhh
Q 047713 142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-------EAKKF-GVTEF-VNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-------~~~~l-g~~~~-~~~~~~~~~~~~~~~~~~ 211 (329)
-..+.+|||+|+ |.+|..++..+...|. .|++++++..+.+ ..+.. +...+ .|..+. +.+.+.++..
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~l~~~~~~~- 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA-DSLRKVLFSE- 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH-HHHHHHHHHh-
Confidence 345779999987 9999999998888898 7888887664321 11112 22222 233221 1233333322
Q ss_pred cCCccEEEEecCC
Q 047713 212 NGGVDRSVECTGS 224 (329)
Q Consensus 212 ~~~~d~Vid~~g~ 224 (329)
+.++|+||+|.+.
T Consensus 134 ~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 GDPVDVVVSCLAS 146 (390)
T ss_pred CCCCcEEEECCcc
Confidence 1169999998863
No 460
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=93.11 E-value=1.1 Score=38.58 Aligned_cols=99 Identities=17% Similarity=0.307 Sum_probs=62.3
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCCcc
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGGVD 216 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~d 216 (329)
+.....++.+||-.|+|. |..+..+++ .|. .|++++.+++..+.+++.... ..+. .+ ... + ....+.+|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~-~d----~~~-~-~~~~~~fD 105 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA-GD----IES-L-PLATATFD 105 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE-cC----ccc-C-cCCCCcEE
Confidence 334445678899998864 666666655 466 899999999998888775431 1111 01 100 0 11123699
Q ss_pred EEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713 217 RSVECTG------SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 217 ~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+|+.... ....+....+.|+++ |.++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9985432 124577888899998 99887643
No 461
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=93.11 E-value=0.68 Score=36.53 Aligned_cols=101 Identities=23% Similarity=0.360 Sum_probs=53.8
Q ss_pred eEEEEcCCHHHHHHHHHHHH-cCCCEEEE-Ec-CChhhHHHHHhcCCce-----eeCCCCCC----c---hH--HHHHHh
Q 047713 147 SVAIFGLGAVGLAAAEGARV-SGASRIIG-VD-LNPSRFNEAKKFGVTE-----FVNPKDYD----K---PV--QQVIAD 209 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~-~G~~~vv~-~~-~~~~~~~~~~~lg~~~-----~~~~~~~~----~---~~--~~~~~~ 209 (329)
+|.|+|.|.+|...++.+.. .+. .+++ .+ .+.+...++-++-..+ -+..++.. . .+ .+...+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 57889999999998887764 456 4444 44 2444444443321111 00001100 0 00 011122
Q ss_pred hh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 210 MT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 210 ~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
+. .. ++|+|+||+|.-...+.+...+..+ .+-|.++.+.
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap~ 121 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAPA 121 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCCC
Confidence 22 22 7999999998655555666677765 6666666543
No 462
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.11 E-value=1.3 Score=41.66 Aligned_cols=104 Identities=15% Similarity=0.260 Sum_probs=63.1
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhcC
Q 047713 139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
...+++|++||=.|+|+ |..++.++..++ ..+|++++.++++.+.++ ++|.+.+. ....+ .. .+.....+
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~~ 306 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQD 306 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhhc
Confidence 45678899988887653 555556666552 238999999999987764 45654321 11111 11 11112234
Q ss_pred CccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEeccC
Q 047713 214 GVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 214 ~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
.||.|+- |+|. .+.+..+++.|+++ |.++....+
T Consensus 307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 6999873 3332 12366788889998 998776553
No 463
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=93.10 E-value=1.7 Score=32.50 Aligned_cols=88 Identities=25% Similarity=0.361 Sum_probs=58.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHc--CCCEEE-EEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 147 SVAIFGLGAVGLAAAEGARVS--GASRII-GVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~--G~~~vv-~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
+|.|.|.|.+|..-..-++.. +. .++ .++.++++.+. .++++.. .+.. +.+.+.. ..+|+|+.++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~~------~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYTD------LEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EESS------HHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chhH------HHHHHHh---hcCCEEEEec
Confidence 578889999998887655544 44 444 55666666654 5667776 3321 3333222 2699999999
Q ss_pred CCHHHHHHHHHhhccCCeEEEEecc
Q 047713 223 GSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 223 g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
....+.+.+..++.. |.-+.+..
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 888888888888886 55666643
No 464
>PRK03612 spermidine synthase; Provisional
Probab=93.09 E-value=0.76 Score=44.28 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-Cce----eeCCCCC---CchHHHHHHhhhcCC
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-VTE----FVNPKDY---DKPVQQVIADMTNGG 214 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~~~----~~~~~~~---~~~~~~~~~~~~~~~ 214 (329)
++.++||+.|+| .|..+..+++.-..++|++++.+++-.+.+++.- ... .++...- ..+..+.+++ ..++
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~-~~~~ 373 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRK-LAEK 373 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHh-CCCC
Confidence 457899999875 3666777777655469999999999999988721 100 1110000 0123333433 2348
Q ss_pred ccEEEEecCC-----------HHHHHHHHHhhccCCeEEEEec
Q 047713 215 VDRSVECTGS-----------VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 215 ~d~Vid~~g~-----------~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+|+|+-.... .+.++.+.+.|+++ |.++.-.
T Consensus 374 fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 374 FDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 9998743221 13567888899998 9987654
No 465
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=93.08 E-value=0.88 Score=40.03 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=54.0
Q ss_pred CCCCeEEEEcC-CHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHH-----HhcCC---ceeeCCCCCCchHHHHHHhhhc
Q 047713 143 KKGQSVAIFGL-GAVGLAAAE-GARVSGASRIIGVDLNPSRFNEA-----KKFGV---TEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~-la~~~G~~~vv~~~~~~~~~~~~-----~~lg~---~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
+-|++.+|+|+ .+||-+-+. +|+ .|. +|+-++++++|++.. ++.++ ..++|+.+.+..+. .+++.+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye-~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYE-KLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHH-HHHHHhc
Confidence 34788999987 899966555 555 899 799999999998754 33443 23556655543243 4444444
Q ss_pred C-CccEEEEecCC
Q 047713 213 G-GVDRSVECTGS 224 (329)
Q Consensus 213 ~-~~d~Vid~~g~ 224 (329)
+ .+-+.++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 4 78888999984
No 466
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.07 E-value=0.43 Score=42.04 Aligned_cols=43 Identities=33% Similarity=0.346 Sum_probs=36.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~ 185 (329)
.++++++|+|+|+.+.+++.-+...|+++++.+.++.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 3478999999999999999988889988898998888776554
No 467
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.06 E-value=0.8 Score=40.96 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~ 180 (329)
.|.+|.|+|.|.+|...++.++.+|. +|++.+.+.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 58899999999999999999999999 8888876543
No 468
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.05 E-value=0.68 Score=41.42 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=48.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHH-HHhcCC---c-ee--eCCCCCCchHHHHHHhhh--cC
Q 047713 145 GQSVAIFGL-GAVGLAAAEGARVSG-ASRIIGVDLNPSRFNE-AKKFGV---T-EF--VNPKDYDKPVQQVIADMT--NG 213 (329)
Q Consensus 145 g~~VlI~Ga-g~iG~aai~la~~~G-~~~vv~~~~~~~~~~~-~~~lg~---~-~~--~~~~~~~~~~~~~~~~~~--~~ 213 (329)
+++++|+|+ +++|.+++..+...| . +|+.+.+++++.+. .+++.. . .. .|..+.+ +..+.+.++. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLD-SVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence 568999987 999999998888889 7 78888777766543 334431 1 11 2332221 2333333332 23
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
++|++|++.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 69999988873
No 469
>PRK05855 short chain dehydrogenase; Validated
Probab=93.02 E-value=0.53 Score=45.73 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~ 213 (329)
.+.++||+|+ |++|.+.++.+...|. +|+.+++++++.+.+ ++.|... ..|..+.+ ...+.+.+... +
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD-AMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 4678999986 9999999998888999 788888887665432 2334311 12333221 23333333322 3
Q ss_pred CccEEEEecCC
Q 047713 214 GVDRSVECTGS 224 (329)
Q Consensus 214 ~~d~Vid~~g~ 224 (329)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999874
No 470
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.01 E-value=0.62 Score=42.52 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=31.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
..+|+|.|+|++|..+++.+...|.+++..++.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 57899999999999999999999998888887754
No 471
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.00 E-value=0.39 Score=41.42 Aligned_cols=101 Identities=19% Similarity=0.144 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC-----CchHHHHHHhhhcCCccEE
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-----DKPVQQVIADMTNGGVDRS 218 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~V 218 (329)
+.++|||+|.|. |..+-.++++...+++.+++.+++-.+.++++-........+. ..+....+++.....+|+|
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~Dg~~~l~~~~~~~yDvI 154 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIGDGRKFLKETQEEKYDVI 154 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEESTHHHHHHTSSST-EEEE
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEhhhHHHHHhccCCcccEE
Confidence 578999998654 5566677777766799999999998888887421100000000 0125555665443379998
Q ss_pred E-EecC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713 219 V-ECTG---------SVQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 219 i-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g 246 (329)
+ |... +.+.++.+.++|+++ |.++.-.
T Consensus 155 i~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 155 IVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp EEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 6 5442 246788899999998 9887664
No 472
>PRK06849 hypothetical protein; Provisional
Probab=92.97 E-value=1.1 Score=41.44 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeC-CCCCCchHHHHHHhhhcC-CccEEE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVN-PKDYDKPVQQVIADMTNG-GVDRSV 219 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~-~~~~~~~~~~~~~~~~~~-~~d~Vi 219 (329)
...+|||+|+ .++|+..+..++..|. +|+++++.+.......+ ......+. +......+.+.+.++... ++|+||
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 3578999987 6789999999999999 88888877644332211 11112221 222223466777777666 899999
Q ss_pred EecC
Q 047713 220 ECTG 223 (329)
Q Consensus 220 d~~g 223 (329)
-+..
T Consensus 82 P~~e 85 (389)
T PRK06849 82 PTCE 85 (389)
T ss_pred ECCh
Confidence 7763
No 473
>PRK08219 short chain dehydrogenase; Provisional
Probab=92.97 E-value=0.53 Score=39.47 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=45.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceee--CCCCCCchHHHHHHhhhcC--CccEEE
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFV--NPKDYDKPVQQVIADMTNG--GVDRSV 219 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~--~~~~~~~~~~~~~~~~~~~--~~d~Vi 219 (329)
.++||+|+ |.+|...+..+... . +|+.++++.++.+.+.+ +.....+ |..+. ..++++..+ ++|.||
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP-----EAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH-----HHHHHHHHhcCCCCEEE
Confidence 57999986 99999998877655 6 78888888776554432 2111122 22221 223333322 699999
Q ss_pred EecCC
Q 047713 220 ECTGS 224 (329)
Q Consensus 220 d~~g~ 224 (329)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
No 474
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.94 E-value=0.52 Score=40.34 Aligned_cols=74 Identities=26% Similarity=0.317 Sum_probs=46.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDR 217 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~ 217 (329)
+++++||+|+ |.+|...+..+...|+ +|+.++++. .+..+... ..|..+. +.+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDA-AAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 3689999986 9999999998888898 788887665 12222211 1122221 123333333322 36899
Q ss_pred EEEecCC
Q 047713 218 SVECTGS 224 (329)
Q Consensus 218 Vid~~g~ 224 (329)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 475
>PRK06701 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.78 Score=40.50 Aligned_cols=80 Identities=24% Similarity=0.173 Sum_probs=47.1
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hH----HHHHhcCCce---eeCCCCCCchHHHHHHhhhc-
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-RF----NEAKKFGVTE---FVNPKDYDKPVQQVIADMTN- 212 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~~----~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~- 212 (329)
-++.++||+|+ |.+|..++..+...|+ +|+.+.++.+ .. +.++..+... ..|..+. ....+.+++...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDE-AFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 34789999986 9999999998888898 6777766532 11 1222233222 1222221 123333333322
Q ss_pred -CCccEEEEecCC
Q 047713 213 -GGVDRSVECTGS 224 (329)
Q Consensus 213 -~~~d~Vid~~g~ 224 (329)
+++|++|.+.|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 368999988773
No 476
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=92.92 E-value=1.6 Score=38.58 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=48.4
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ 226 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~ 226 (329)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....- + ..+.++ ..|+||.++....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTAE-----T--ARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCcccC-----C--HHHHHh-----cCCEEEEecCCHH
Confidence 36788999999988888888898 899999999988888777653211 1 212221 3688888876543
Q ss_pred HHH
Q 047713 227 AMI 229 (329)
Q Consensus 227 ~~~ 229 (329)
...
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 333
No 477
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.92 E-value=0.73 Score=39.80 Aligned_cols=79 Identities=23% Similarity=0.183 Sum_probs=47.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH----HHHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFN----EAKKFGVTE---FVNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~----~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~-- 212 (329)
+++++||+|+ |.+|..+++.+...|+ +|+.+.+ +++..+ .++..+... ..|..+.. +..+.+.....
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVES-DVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence 4789999986 9999999999989998 5655544 333322 223333321 22333221 23333333322
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 369999998874
No 478
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=92.91 E-value=1.1 Score=40.42 Aligned_cols=97 Identities=21% Similarity=0.269 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhh--hcCCccEEEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADM--TNGGVDRSVE 220 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~~~d~Vid 220 (329)
.++.+||-+|+|. |..+..+++..+..+|++++.+++..+.+++.....-+.....+ +.++ ..+.+|+|+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD------~e~lp~~~~sFDvVIs 184 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD------AEDLPFPTDYADRYVS 184 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc------HHhCCCCCCceeEEEE
Confidence 4678898888765 77777778776545899999998887777664211111111111 1222 1236998875
Q ss_pred ecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713 221 CTG------SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 221 ~~g------~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.. ....++.+.+.|+++ |+++.++.
T Consensus 185 ~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 185 AGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred cChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 421 134577888999998 99887754
No 479
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.87 E-value=1.4 Score=39.82 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~ 180 (329)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRK 184 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence 58899999999999999999999999 8988887654
No 480
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.83 E-value=1.5 Score=39.56 Aligned_cols=96 Identities=18% Similarity=-0.003 Sum_probs=59.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--C--CCCCCchHHHHHHhhhcCCccEEEEec
Q 047713 147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--N--PKDYDKPVQQVIADMTNGGVDRSVECT 222 (329)
Q Consensus 147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~--~~~~~~~~~~~~~~~~~~~~d~Vid~~ 222 (329)
+|.|+|+|.+|.+.+..+...|. .|...++++++.+.+++.+..... . ....- .......+.. ...|+||-++
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~-~~~~~~~e~~-~~aD~Vi~~v 82 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAEL-YPTADPEEAL-AGADFAVVAV 82 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCe-EEeCCHHHHH-cCCCEEEEEC
Confidence 68899999999999998888888 788888888877766654211100 0 00000 0000111111 2589999999
Q ss_pred CCHHHHHHHHHhhccCCeEEEEecc
Q 047713 223 GSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 223 g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
... .++..++.++++ -.++.+..
T Consensus 83 ~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 83 PSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred chH-HHHHHHHhcCcC-CEEEEEee
Confidence 654 567777777775 56665544
No 481
>PRK12744 short chain dehydrogenase; Provisional
Probab=92.83 E-value=0.64 Score=40.03 Aligned_cols=79 Identities=22% Similarity=0.305 Sum_probs=44.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC----hhhH-HH---HHhcCCce---eeCCCCCCchHHHHHHhhh
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN----PSRF-NE---AKKFGVTE---FVNPKDYDKPVQQVIADMT 211 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~----~~~~-~~---~~~lg~~~---~~~~~~~~~~~~~~~~~~~ 211 (329)
.+.++||+|+ |.+|.+++..+...|+ +|+.+..+ .++. +. ++..+... ..|..+. ++..+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~ 84 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTA-AAVEKLFDDAK 84 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCH-HHHHHHHHHHH
Confidence 3678999986 9999999998888898 54444322 1222 12 22233321 1233221 12333333332
Q ss_pred c--CCccEEEEecCC
Q 047713 212 N--GGVDRSVECTGS 224 (329)
Q Consensus 212 ~--~~~d~Vid~~g~ 224 (329)
. +++|++|.+.|.
T Consensus 85 ~~~~~id~li~~ag~ 99 (257)
T PRK12744 85 AAFGRPDIAINTVGK 99 (257)
T ss_pred HhhCCCCEEEECCcc
Confidence 2 368999998874
No 482
>PRK14982 acyl-ACP reductase; Provisional
Probab=92.78 E-value=0.65 Score=41.91 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=59.1
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 143 KKGQSVAIFGL-GAVGLAAAEGAR-VSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~aai~la~-~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
-.+.+|+|+|+ |.+|..++..+. ..|...++.+.++.++.+.+ ++++... .. .+.+.. ...|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----------i~-~l~~~l-~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----------IL-SLEEAL-PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----------HH-hHHHHH-ccCCEEE
Confidence 35789999998 999999988775 45666888888887776654 3343111 11 122222 2489999
Q ss_pred EecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713 220 ECTGSVQAMISAFECVHDGWGVAVLVGVP 248 (329)
Q Consensus 220 d~~g~~~~~~~~~~~l~~~~G~vv~~g~~ 248 (329)
.+++.+..+..-.+.+++. -.++.++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9987654432222345665 677777754
No 483
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=92.70 E-value=0.77 Score=39.05 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=46.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMT--NGG 214 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~~ 214 (329)
.++||+|+ |.+|.+.+..+...|+ .|+. ..+++++.+. ++..+... ..|..+. +...+.+++.. .++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDE-NQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCH-HHHHHHHHHHHHhCCC
Confidence 37899987 9999999998888898 5654 4455544322 22233211 1233222 12444444433 237
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 484
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=92.68 E-value=0.46 Score=35.34 Aligned_cols=97 Identities=24% Similarity=0.311 Sum_probs=56.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
|.+||-.|+| .|..++.+++.. ...+++++.++...+.++.. +.+.-+..... ++.+....+..+.+|+|+-
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~--D~~~~~~~~~~~~~D~Iv~ 76 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG--DARDLPEPLPDGKFDLIVT 76 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES--HHHHHHHTCTTT-EEEEEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC--chhhchhhccCceeEEEEE
Confidence 4567777553 244455555544 44999999999988877652 22110111111 2444443344458999974
Q ss_pred ecCC--------------HHHHHHHHHhhccCCeEEEEec
Q 047713 221 CTGS--------------VQAMISAFECVHDGWGVAVLVG 246 (329)
Q Consensus 221 ~~g~--------------~~~~~~~~~~l~~~~G~vv~~g 246 (329)
.-.. ...++.+.++|+++ |.++.+-
T Consensus 77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~~ 115 (117)
T PF13659_consen 77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFIT 115 (117)
T ss_dssp --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEEe
Confidence 2211 23477888999998 9887763
No 485
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=92.66 E-value=4.4 Score=33.95 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP-SRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC 221 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~-~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~ 221 (329)
.|..|||.|+|.+|.-=+.++...|+ +|++++.+- ..+. +.++.+...+ . ...+ . ..+ .++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~-~-~~~~----~--~~~--~~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWI-E-REFD----A--EDL--DDAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchh-h-cccC----h--hhh--cCceEEEEe
Confidence 47899999999999999999999999 777775544 2222 2333221111 1 1111 0 000 148899999
Q ss_pred cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713 222 TGSVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 222 ~g~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
++.+..-+...+.+... +.++-...
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D 104 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVD 104 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccC
Confidence 97755555555566665 77766654
No 486
>PLN02256 arogenate dehydrogenase
Probab=92.65 E-value=1.3 Score=39.53 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=57.6
Q ss_pred cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713 140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV 219 (329)
Q Consensus 140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 219 (329)
..-..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|... ..+ ..+.+ ....|+||
T Consensus 31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVi 97 (304)
T PLN02256 31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVL 97 (304)
T ss_pred hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEE
Confidence 333456789999999999998888888887 7888887764 35566677632 111 21111 12478988
Q ss_pred EecCCHHHHHHHHHh-----hccCCeEEEEecc
Q 047713 220 ECTGSVQAMISAFEC-----VHDGWGVAVLVGV 247 (329)
Q Consensus 220 d~~g~~~~~~~~~~~-----l~~~~G~vv~~g~ 247 (329)
-|+.. ..+...++- +.++ ..++.++.
T Consensus 98 lavp~-~~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 98 LCTSI-LSTEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EecCH-HHHHHHHHhhhhhccCCC-CEEEecCC
Confidence 88854 333433332 3344 55666655
No 487
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=92.64 E-value=0.85 Score=38.74 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=45.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcC---Cce-e--eCCCCCCchHHHHHHhhhc--CC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFG---VTE-F--VNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg---~~~-~--~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+++||+|+ |.+|..+++.+...|. +|+.+.++.. ..+....+. ... . .|..+. +...+.+++... +.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDT-EECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence 47899986 9999999998888898 7888877643 122222222 111 1 122221 123333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 488
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.64 E-value=0.87 Score=41.80 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=30.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5689999999999999999999999888888775
No 489
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=92.64 E-value=0.63 Score=39.48 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=45.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH-HHHhc---CCc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713 146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFN-EAKKF---GVT---EFVNPKDYDKPVQQVIADMTN--GG 214 (329)
Q Consensus 146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~-~~~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~~ 214 (329)
+++||+|+ |.+|..++..+...|+ +|+++.+ ++++.+ ...++ +.. ...|..+. .++.+.+.++.. +.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF-ESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHcCC
Confidence 46899986 9999999999888999 6776655 443332 22222 211 11222221 123333333322 36
Q ss_pred ccEEEEecCC
Q 047713 215 VDRSVECTGS 224 (329)
Q Consensus 215 ~d~Vid~~g~ 224 (329)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999873
No 490
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=92.61 E-value=0.5 Score=40.37 Aligned_cols=106 Identities=22% Similarity=0.369 Sum_probs=61.7
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCcee--eCCCCCCchHHHHHHh
Q 047713 137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEF--VNPKDYDKPVQQVIAD 209 (329)
Q Consensus 137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~~~~ 209 (329)
......++|++||=.|+| +|..+..+++..+. .+|++++.+++-++.+++ .+...+ +..+..+ + .
T Consensus 40 ~~~~~~~~g~~vLDv~~G-tG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~--l-----p 111 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACG-TGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED--L-----P 111 (233)
T ss_dssp HHHHT--S--EEEEET-T-TSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred HhccCCCCCCEEEEeCCC-hHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH--h-----c
Confidence 444567889999988765 47788888887653 389999999998877664 222111 1000000 0 1
Q ss_pred hhcCCccEEEEecCC------HHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713 210 MTNGGVDRSVECTGS------VQAMISAFECVHDGWGVAVLVGVPNKD 251 (329)
Q Consensus 210 ~~~~~~d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~~~~~ 251 (329)
...+.+|+|.-+.|- ...+....+.|+|+ |+++.+......
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~ 158 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR 158 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence 112369999877763 34678888999998 999888764443
No 491
>PLN02928 oxidoreductase family protein
Probab=92.59 E-value=1.3 Score=40.24 Aligned_cols=34 Identities=29% Similarity=0.547 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~ 178 (329)
.|.+|.|+|.|.+|..+++.++.+|. +|++.+++
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~ 191 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRS 191 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCC
Confidence 58899999999999999999999999 89998775
No 492
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=92.57 E-value=0.81 Score=39.03 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=46.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH-H---HHhcCCce-e--eCCCCCCchHHHHHHhhhc--
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFN-E---AKKFGVTE-F--VNPKDYDKPVQQVIADMTN-- 212 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~-~---~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~-- 212 (329)
.+++++|+|+ |.+|..++..+...|+ .|+.+. +++++.+ . +++.+... . .|..+. ..+.+.+++...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV-EDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence 3789999986 9999999998888898 565543 3333332 2 22233221 1 122221 123334444332
Q ss_pred CCccEEEEecCC
Q 047713 213 GGVDRSVECTGS 224 (329)
Q Consensus 213 ~~~d~Vid~~g~ 224 (329)
+.+|+||.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 493
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=92.46 E-value=0.91 Score=38.51 Aligned_cols=104 Identities=16% Similarity=0.223 Sum_probs=64.7
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCc----eeeCCCCCCchHHHHHHhhhc
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKFGVT----EFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~ 212 (329)
......++.+||-.|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. ..+.....+ .... ....
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~ 119 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD 119 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence 334456788999999876 788888888775 23899999999887777664211 111111111 1110 0112
Q ss_pred CCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713 213 GGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 213 ~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.+|+|+-... ....+..+.++|+++ |.++.+..
T Consensus 120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~ 159 (239)
T PRK00216 120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF 159 (239)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence 36898874321 234567888899998 99887754
No 494
>PRK07340 ornithine cyclodeaminase; Validated
Probab=92.44 E-value=0.58 Score=41.73 Aligned_cols=96 Identities=16% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713 143 KKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE 220 (329)
Q Consensus 143 ~~g~~VlI~Gag~iG~aai~la~-~~G~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid 220 (329)
....+++|+|+|..|.+.+..+. ..+.+++....+++++.+. ++++.... +.....+ ..+.+ .+.|+|+.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~~--~~~av-----~~aDiVit 194 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPLD--GEAIP-----EAVDLVVT 194 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEECC--HHHHh-----hcCCEEEE
Confidence 45679999999999998888775 4687789999988877654 44443210 0000011 32232 25899999
Q ss_pred ecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713 221 CTGSVQAMISAFECVHDGWGVAVLVGVPN 249 (329)
Q Consensus 221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~~~ 249 (329)
++.+...+-..+ ++++ -++..+|...
T Consensus 195 aT~s~~Pl~~~~--~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 195 ATTSRTPVYPEA--ARAG-RLVVAVGAFT 220 (304)
T ss_pred ccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence 987654433333 6776 7888888643
No 495
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=92.43 E-value=1 Score=41.34 Aligned_cols=80 Identities=26% Similarity=0.232 Sum_probs=45.8
Q ss_pred CCCCeEEEEcC-CHHHHH--HHHHHHHcCCCEEEEEcCCh---h-------------hHHHHHhcCCce-ee--CCCCCC
Q 047713 143 KKGQSVAIFGL-GAVGLA--AAEGARVSGASRIIGVDLNP---S-------------RFNEAKKFGVTE-FV--NPKDYD 200 (329)
Q Consensus 143 ~~g~~VlI~Ga-g~iG~a--ai~la~~~G~~~vv~~~~~~---~-------------~~~~~~~lg~~~-~~--~~~~~~ 200 (329)
..++++||+|+ +++|++ +++.+ ..|+ .+++++... + -.+.++++|... .+ |..+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~- 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD- 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH-
Confidence 34678999986 899999 45555 7898 666665321 1 123455566432 22 22221
Q ss_pred chHHHHHHhhhc--CCccEEEEecCCH
Q 047713 201 KPVQQVIADMTN--GGVDRSVECTGSV 225 (329)
Q Consensus 201 ~~~~~~~~~~~~--~~~d~Vid~~g~~ 225 (329)
+...+.+.++.. |++|+++++.+.+
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 122233333322 4799999999865
No 496
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=92.43 E-value=1.7 Score=40.83 Aligned_cols=102 Identities=16% Similarity=0.319 Sum_probs=60.9
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-cC
Q 047713 139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT-NG 213 (329)
Q Consensus 139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (329)
...+++|++||=.|+|+ |..++.+++..+...|++++.++++.+.++ ++|....+...+ ..+ +.... .+
T Consensus 239 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D----~~~-~~~~~~~~ 312 (427)
T PRK10901 239 LLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGD----ARD-PAQWWDGQ 312 (427)
T ss_pred HcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcC----ccc-chhhcccC
Confidence 45678899998887643 445556666554238999999998877664 345432111111 111 11111 23
Q ss_pred CccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713 214 GVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 214 ~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
.+|.|+ | |+|. ...+..+.+.|+++ |+++....
T Consensus 313 ~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvystc 373 (427)
T PRK10901 313 PFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYATC 373 (427)
T ss_pred CCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 699987 2 3331 13577888899998 99886643
No 497
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=92.39 E-value=0.17 Score=35.83 Aligned_cols=84 Identities=23% Similarity=0.351 Sum_probs=52.0
Q ss_pred EcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhhcCCccEEEEecC----
Q 047713 151 FGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTNGGVDRSVECTG---- 223 (329)
Q Consensus 151 ~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g---- 223 (329)
.|+| .|..+..+++. +...|++++.+++..+.+++..... ....+..+ + ....+.+|+|+....
T Consensus 3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~------l-~~~~~sfD~v~~~~~~~~~ 73 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAED------L-PFPDNSFDVVFSNSVLHHL 73 (95)
T ss_dssp ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTS------S-SS-TT-EEEEEEESHGGGS
T ss_pred ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHh------C-ccccccccccccccceeec
Confidence 4555 68888888888 4449999999999888887754432 11111111 0 122237999975432
Q ss_pred --CHHHHHHHHHhhccCCeEEEE
Q 047713 224 --SVQAMISAFECVHDGWGVAVL 244 (329)
Q Consensus 224 --~~~~~~~~~~~l~~~~G~vv~ 244 (329)
....+..+.+.|+++ |.++.
T Consensus 74 ~~~~~~l~e~~rvLk~g-G~l~~ 95 (95)
T PF08241_consen 74 EDPEAALREIYRVLKPG-GRLVI 95 (95)
T ss_dssp SHHHHHHHHHHHHEEEE-EEEEE
T ss_pred cCHHHHHHHHHHHcCcC-eEEeC
Confidence 224568888899998 98763
No 498
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.37 E-value=0.46 Score=45.24 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-----hcCCc----eeeCCCCCCchHHHHHHhhhcC
Q 047713 144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-----KFGVT----EFVNPKDYDKPVQQVIADMTNG 213 (329)
Q Consensus 144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-----~lg~~----~~~~~~~~~~~~~~~~~~~~~~ 213 (329)
.|++|||+|+ |.+|...+.-....+.++++..++++.++..++ .++.. .+-|..+. +.+.+...+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-----~~~~~~~~~ 323 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-----DRVERAMEG 323 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-----HHHHHHHhc
Confidence 5999999987 999987776555558889999999998765442 22311 12233332 345555566
Q ss_pred -CccEEEEecC
Q 047713 214 -GVDRSVECTG 223 (329)
Q Consensus 214 -~~d~Vid~~g 223 (329)
++|+||.++.
T Consensus 324 ~kvd~VfHAAA 334 (588)
T COG1086 324 HKVDIVFHAAA 334 (588)
T ss_pred CCCceEEEhhh
Confidence 8999998774
No 499
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=92.36 E-value=1.3 Score=41.77 Aligned_cols=104 Identities=18% Similarity=0.377 Sum_probs=60.9
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc
Q 047713 138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN 212 (329)
Q Consensus 138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~ 212 (329)
....++++++||=.|+|+ |..++.+++.. +..+|++++.++++.+.++ ++|...+ .....+ ..+....+ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~D--~~~~~~~~-~ 318 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKALD--ARKVHEKF-A 318 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeCC--cccccchh-c
Confidence 345678899988887643 44455556554 2338999999998877654 3565431 111111 11111111 1
Q ss_pred CCccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713 213 GGVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV 247 (329)
Q Consensus 213 ~~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~ 247 (329)
+.+|.|+ | |+|. ...+..+.+.|+++ |+++....
T Consensus 319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvystc 380 (444)
T PRK14902 319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYSTC 380 (444)
T ss_pred ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEcC
Confidence 4689986 3 3332 13567788899998 99886543
No 500
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=92.36 E-value=0.52 Score=41.64 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179 (329)
Q Consensus 144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~ 179 (329)
++++++|+|+|+.+.+++..+...|+++++.+.+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999888877788988898888874
Done!