BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047716
(325 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 178/294 (60%), Gaps = 11/294 (3%)
Query: 21 KLRSFSYEQIVLASENF--KEEIGRGGSGRVYKGCINGGKEIAVKKLIK-IVEEGESEFR 77
+L+ FS ++ +AS+NF K +GRGG G+VYKG + G +AVK+L + + GE +F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---FRAEQRLSWSERRR 134
E+++I H+NL+ L GFC + RLLVY +M NGS+ + L ++ L W +R+R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
IAL GL YLHD C+ +IIH D+K NIL+DE ++A + DFGL+KL+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDES--LRDDEIVLIDWAHQ 252
RGT G+ APE S + + K DV+ +GVMLLE++ ++ D + DD+++L+DW
Sbjct: 204 RGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 253 CYEAGELQNLVSD--QEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEG 304
+ +L+ LV Q + EE E L+++ L C + RP M +V+ M+EG
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 177/294 (60%), Gaps = 11/294 (3%)
Query: 21 KLRSFSYEQIVLASENF--KEEIGRGGSGRVYKGCINGGKEIAVKKLIK-IVEEGESEFR 77
+L+ FS ++ +AS+NF K +GRGG G+VYKG + G +AVK+L + + GE +F+
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---FRAEQRLSWSERRR 134
E+++I H+NL+ L GFC + RLLVY +M NGS+ + L ++ L W +R+R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
IAL GL YLHD C+ +IIH D+K NIL+DE ++A + DFGL+KL+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDES--LRDDEIVLIDWAHQ 252
RG G+ APE S + + K DV+ +GVMLLE++ ++ D + DD+++L+DW
Sbjct: 196 RGXIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 253 CYEAGELQNLVSD--QEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEG 304
+ +L+ LV Q + EE E L+++ L C + RP M +V+ M+EG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 163/281 (58%), Gaps = 16/281 (5%)
Query: 33 ASENFKEE--IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
A+ NF + IG G G+VYKG + G ++A+K+ +G EF E++ + H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE---QRLSWSERRRIALEIMEGLHYLH 147
LV L+GFC E + +L+Y++M NG+L L+ ++ +SW +R I + GLHYLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPELH 206
IIH D+K NIL+DE++ KI+DFG+SK + DQT V++GT GY PE
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ R+T K+DVYSFGV+L E++C R + +SL + + L +WA + + G+L+ +V
Sbjct: 214 IK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 267 EDVNIEEFENLVKIGLWCVECELNL----RPTMKQVIWMME 303
I E+L K G V+C L L RP+M V+W +E
Sbjct: 273 LADKIRP-ESLRKFGDTAVKC-LALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 162/281 (57%), Gaps = 16/281 (5%)
Query: 33 ASENFKEE--IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
A+ NF + IG G G+VYKG + G ++A+K+ +G EF E++ + H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE---QRLSWSERRRIALEIMEGLHYLH 147
LV L+GFC E + +L+Y++M NG+L L+ ++ +SW +R I + GLHYLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPELH 206
IIH D+K NIL+DE++ KI+DFG+SK + QT V++GT GY PE
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ R+T K+DVYSFGV+L E++C R + +SL + + L +WA + + G+L+ +V
Sbjct: 214 IK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 267 EDVNIEEFENLVKIGLWCVECELNL----RPTMKQVIWMME 303
I E+L K G V+C L L RP+M V+W +E
Sbjct: 273 LADKIRP-ESLRKFGDTAVKC-LALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 167/301 (55%), Gaps = 23/301 (7%)
Query: 19 EIKLRSFSYEQIVLASENFKE--------EIGRGGSGRVYKGCINGGKEIAVKKLIKIV- 69
+ + SFS+ ++ + NF E ++G GG G VYKG +N +AVKKL +V
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 70 ---EEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAE 124
EE + +F E+K++ + H+NLV+L+GF S+G + LVY +M NGSL + L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL- 183
LSW R +IA G+++LH E IH DIK NIL+DE++ AKISDFGL++
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 184 KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
K QT + + GT Y APE + IT K+D+YSFGV+LLEI+ VDE R+ +
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPE--ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQ 241
Query: 244 IVLIDWAHQCYEAGELQNLVSDQ-EDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMM 302
++L E +++ + + D + E + + C+ + N RP +K+V ++
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 303 E 303
+
Sbjct: 302 Q 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 166/301 (55%), Gaps = 23/301 (7%)
Query: 19 EIKLRSFSYEQIVLASENFKE--------EIGRGGSGRVYKGCINGGKEIAVKKLIKIV- 69
+ + SFS+ ++ + NF E ++G GG G VYKG +N +AVKKL +V
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 70 ---EEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAE 124
EE + +F E+K++ + H+NLV+L+GF S+G + LVY +M NGSL + L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL- 183
LSW R +IA G+++LH E IH DIK NIL+DE++ AKISDFGL++
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 184 KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
K QT + GT Y APE + IT K+D+YSFGV+LLEI+ VDE R+ +
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPE--ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQ 241
Query: 244 IVLIDWAHQCYEAGELQNLVSDQ-EDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMM 302
++L E +++ + + D + E + + C+ + N RP +K+V ++
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 303 E 303
+
Sbjct: 302 Q 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 23/301 (7%)
Query: 19 EIKLRSFSYEQIVLASENFKE--------EIGRGGSGRVYKGCINGGKEIAVKKLIKIV- 69
+ + SFS+ ++ + NF E ++G GG G VYKG +N +AVKKL +V
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 61
Query: 70 ---EEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAE 124
EE + +F E+K++ + H+NLV+L+GF S+G + LVY +M NGSL + L
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL- 183
LSW R +IA G+++LH E IH DIK NIL+DE++ AKISDFGL++
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 184 KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
K Q + GT Y APE + IT K+D+YSFGV+LLEI+ VDE R+ +
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE--ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQ 235
Query: 244 IVLIDWAHQCYEAGELQNLVSDQ-EDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMM 302
++L E +++ + + D + E + + C+ + N RP +K+V ++
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 303 E 303
+
Sbjct: 296 Q 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 161/299 (53%), Gaps = 23/299 (7%)
Query: 21 KLRSFSYEQIVLASENFKE--------EIGRGGSGRVYKGCINGGKEIAVKKLIKIV--- 69
+ SFS+ ++ + NF E + G GG G VYKG +N +AVKKL +V
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 60
Query: 70 -EEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR 126
EE + +F E+K+ + H+NLV+L+GF S+G + LVY + NGSL + L
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 127 LSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL-KT 185
LSW R +IA G+++LH E IH DIK NIL+DE++ AKISDFGL++ K
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 186 DQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
Q + + GT Y APE + IT K+D+YSFGV+LLEI+ VDE R+ +++
Sbjct: 178 AQXVXXSRIVGTTAYXAPE--ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLL 234
Query: 246 LIDWAHQCYEAGELQNLVSDQ-EDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMME 303
L E +++ + + D + E + C+ + N RP +K+V +++
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 8/202 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE--SEFRNEMKIIGRIHHKNLVD 93
N KE+IG G G V++ +G ++AVK L++ E +EF E+ I+ R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIMEGLHYLHDECE 151
+G ++ N +V E++ GSL LL ++ R ERRR+ A ++ +G++YLH+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
I+H D+K N+L+D+ + K+ DFGLS+ LK GT + APE+ R+
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEV-LRDEP 215
Query: 212 ITVKADVYSFGVMLLEIVCCRK 233
K+DVYSFGV+L E+ ++
Sbjct: 216 SNEKSDVYSFGVILWELATLQQ 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 8/202 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIK--IVEEGESEFRNEMKIIGRIHHKNLVD 93
N KE+IG G G V++ +G ++AVK L++ E +EF E+ I+ R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIMEGLHYLHDECE 151
+G ++ N +V E++ GSL LL ++ R ERRR+ A ++ +G++YLH+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
I+H ++K N+L+D+ + K+ DFGLS+ LK + GT + APE+ R+
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEV-LRDEP 215
Query: 212 ITVKADVYSFGVMLLEIVCCRK 233
K+DVYSFGV+L E+ ++
Sbjct: 216 SNEKSDVYSFGVILWELATLQQ 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 7/211 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +EIG G G V+ G ++A+K IK E +F E +++ ++ H LV L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER-RRIALEIMEGLHYLHDECETRI 154
G C E + LV+EFM +G L + L R ++ L +E + L++ EG+ YL + C +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+ S +R +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSRYSS 203
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 23/219 (10%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG---ESEFRNEMKIIGRIHHKNLV 92
F +EIG G G V+ G ++A IK + EG E +F E +++ ++ H LV
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVA----IKTIREGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNL------LFRAEQRLSWSERRRIALEIMEGLHYL 146
L G C E + LV+EFM +G L + LF AE L + L++ EG+ YL
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYL 122
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ C +IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+
Sbjct: 123 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 179
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
S +R + K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 180 S-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG---ESEFRNEMKIIGRIHHKNLV 92
F +EIG G G V+ G ++A IK + EG E +F E +++ ++ H LV
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVA----IKTIREGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR-IALEIMEGLHYLHDECE 151
L G C E + LV+EFM +G L + L R ++ L +E + L++ EG+ YL + C
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 121
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+ S +R
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSR 178
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG---ESEFRNEMKIIGRIHHKNLV 92
F +EIG G G V+ G ++A IK + EG E +F E +++ ++ H LV
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVA----IKTIREGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER-RRIALEIMEGLHYLHDECE 151
L G C E + LV+EFM +G L + L R ++ L +E + L++ EG+ YL + C
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+ S +R
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSR 180
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 23/219 (10%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG---ESEFRNEMKIIGRIHHKNLV 92
F +EIG G G V+ G ++A IK + EG E +F E +++ ++ H LV
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVA----IKTIREGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNL------LFRAEQRLSWSERRRIALEIMEGLHYL 146
L G C E + LV EFM +G L + LF AE L + L++ EG+ YL
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYL 120
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ C +IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+
Sbjct: 121 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 177
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
S +R + K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 178 S-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG---ESEFRNEMKIIGRIHHKNLV 92
F +EIG G G V+ G ++A IK + EG E +F E +++ ++ H LV
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVA----IKTIREGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER-RRIALEIMEGLHYLHDECE 151
L G C E + LV+EFM +G L + L R ++ L +E + L++ EG+ YL E
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLE---E 121
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+IH D+ N L+ E+ K+SDFG+++ + DQ + T + + +PE+ S +R
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSR 180
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ K+DV+SFGV++ E+ K E+ + E+V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 168
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 224
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 205
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 204
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 205
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 111 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 167
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 223
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 146
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 202
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 147
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 203
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 144
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 200
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 141
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + Y + G P
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMA 197
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 41 IGRGGSGRVYKGCI---NGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLV 92
IG G G VYKG + +G KE+ V IK ++ G +E F E I+G+ H N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVA--IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECET 152
L G S+ +++ E+M NG+L L + S + + I G+ YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 153 RIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRNN 210
+H D+ NIL++ + K+SDFGLS++L+ D TYT G +TAPE S
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY-R 225
Query: 211 RITVKADVYSFGVMLLEIVC 230
+ T +DV+SFG+++ E++
Sbjct: 226 KFTSASDVWSFGIVMWEVMT 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ YL
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP----E 204
+ +H D+ N ++DE + K++DFGL++ + + + + G P
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS---VHNKTGAKLPVKWMA 204
Query: 205 LHS-RNNRITVKADVYSFGVMLLEIV 229
L S + + T K+DV+SFGV+L E++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 91 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 147
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 205
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 207
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 152 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 208
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 266
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 207
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE- 208
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 208
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 36 NFKEEIGRGGSGRVYKGCI--NGGKEI--AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKN 90
+F E IGRG G VY G + N GK+I AVK L +I + GE S+F E I+ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 91 LVDLVGFC--SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++ L+G C SEGS L+V +M++G L N + + + L++ +G+ +L
Sbjct: 98 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 154
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---KTDQTRTYTVLRGTRGYTAPEL 205
+ +H D+ N ++DE + K++DFGL++ + + D T + + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE- 212
Query: 206 HSRNNRITVKADVYSFGVMLLEIV 229
+ + T K+DV+SFGV+L E++
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 12 SSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE 70
+ P +EE S+ + + AS + ++ IG G SG V G + + V IK ++
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 71 EGESE-----FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
G +E F +E I+G+ H N++ L G + G ++V E+M NGSL L +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
+ + + + + G+ YL D +H D+ N+L+D + K+SDFGLS++L+
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 186 DQTRTYTVLRGTRG--YTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
D YT G +TAPE + + +DV+SFGV++ E++
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAV-KKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E +G+G G+ K E+ V K+LI+ EE + F E+K++ + H N++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
+ + E+++ G+L ++ + + WS+R A +I G+ YLH IIH
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 158 DIKPHNILMDESWKAKISDFGLSKLL--------------KTDQTRTYTVLRGTRGYTAP 203
D+ HN L+ E+ ++DFGL++L+ K D+ + YTV+ G + AP
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV-GNPYWMAP 191
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ + K DV+SFG++L EI+ R N D
Sbjct: 192 EMIN-GRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 21/214 (9%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIG 84
+I A +E IG GG G+VY+ G E+AVK +E S+ R E K+
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIG-DEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ H N++ L G C + N LV EF R G L +L + +R+ A++I G++
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMN 119
Query: 145 YLHDECETRIIHCDIKPHNILM-------DESWKA-KISDFGLSKLLKTDQTRTYTV-LR 195
YLHDE IIH D+K NIL+ D S K KI+DFGL++ + RT +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAA 175
Query: 196 GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
G + APE+ R + + +DV+S+GV+L E++
Sbjct: 176 GAYAWMAPEV-IRASMFSKGSDVWSYGVLLWELL 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H D+ N L+++ K+SDFGLS+ + D+ YT RG++ ++ PE+ ++
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEV-LMYSKF 183
Query: 213 TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+ K+D+++FGV++ EI K E + E
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 84 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 139
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 195
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 83 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 194
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 88 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 143
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 199
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 192
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 193 KFSIKSDVWAFGVLLWEIA 211
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 133/272 (48%), Gaps = 33/272 (12%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDL 94
+E +GRG G V K K++A+K++ E ESE F E++ + R++H N+V L
Sbjct: 13 EEVVGRGAFGVVCKAKWRA-KDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKL 66
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA--LEIMEGLHYLHDECET 152
G C + LV E+ GSL N+L AE ++ ++ L+ +G+ YLH
Sbjct: 67 YGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 153 RIIHCDIKPHNILMDESWKA-KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+IH D+KP N+L+ KI DFG + ++T T +G+ + APE+ +N
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----KGSAAWMAPEVFEGSN- 179
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWA-HQCYEAGELQNLVSDQEDVN 270
+ K DV+S+G++L E++ RK DE I WA H ++NL E +
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 271 IEEFENLVKIGLWCVECELNLRPTMKQVIWMM 302
C + + RP+M++++ +M
Sbjct: 238 TR-----------CWSKDPSQRPSMEEIVKIM 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEGESE-------FRNEMKIIGRIHH 88
++++IG+GG G V+KG + K + A+K LI EGE+E F+ E+ I+ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
N+V L G +V EF+ G L + L + WS + R+ L+I G+ Y+ +
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 149 ECETRIIHCDIKPHNIL---MDESWK--AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+ I+H D++ NI +DE+ AK++DFGLS+ + + L G + AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 204 E-LHSRNNRITVKADVYSFGVMLLEIVCCRKNVDE 237
E + + T KAD YSF ++L I+ DE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 133/272 (48%), Gaps = 33/272 (12%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDL 94
+E +GRG G V K K++A+K++ E ESE F E++ + R++H N+V L
Sbjct: 14 EEVVGRGAFGVVCKAKWRA-KDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKL 67
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA--LEIMEGLHYLHDECET 152
G C + LV E+ GSL N+L AE ++ ++ L+ +G+ YLH
Sbjct: 68 YGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 153 RIIHCDIKPHNILMDESWKA-KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+IH D+KP N+L+ KI DFG + ++T T +G+ + APE+ +N
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----KGSAAWMAPEVFEGSN- 180
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWA-HQCYEAGELQNLVSDQEDVN 270
+ K DV+S+G++L E++ RK DE I WA H ++NL E +
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 271 IEEFENLVKIGLWCVECELNLRPTMKQVIWMM 302
C + + RP+M++++ +M
Sbjct: 239 TR-----------CWSKDPSQRPSMEEIVKIM 259
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 73 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 128
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 184
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+ N L+ E+ K++DFGLS+L+ D + + +TAPE + N+ +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY-NKFS 188
Query: 214 VKADVYSFGVMLLEIV 229
+K+DV++FGV+L EI
Sbjct: 189 IKSDVWAFGVLLWEIA 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+E+G G G V G G ++AVK +IK E EF E + + ++ H LV G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
S+ +V E++ NG L N L + L S+ + ++ EG+ +L + IH D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADV 218
+ N L+D K+SDFG+++ + DQ + + ++APE+ + + K+DV
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF-HYFKYSSKSDV 188
Query: 219 YSFGVMLLEIVCCRKNVDESLRDDEIVL-IDWAHQCYEAGELQNLVSDQEDVNIEEFENL 277
++FG+++ E+ K + + E+VL + H+ Y +L SD +
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP----HLASD----------TI 234
Query: 278 VKIGLWCVECELNLRPTMKQVIWMMEGI 305
+I C RPT +Q++ +E +
Sbjct: 235 YQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G +G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ + + +TAPE + T+K+D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 192
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 75
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAY-N 188
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 189 KFSIKSDVWAFGVLLWEIA 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 84 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 139
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 198
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 87 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 142
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 201
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 202 VWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 122/229 (53%), Gaps = 20/229 (8%)
Query: 14 PDVFEEIK--LRSFSYEQIVLASENFKEEIGRGGSGRVYKGCIN--GGKEIAVKKLIKIV 69
P FE+ +R F+ E I ++ ++ IG G G V G + G +EI V IK +
Sbjct: 13 PFTFEDPNEAVREFAKE-IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVA--IKTL 69
Query: 70 EEGESE-----FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE 124
+ G +E F +E I+G+ H N++ L G ++ + +++ EFM NGSL + L + +
Sbjct: 70 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND 129
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLK 184
+ + + + I G+ YL D +H D+ NIL++ + K+SDFGLS+ L+
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 185 TDQT-RTYTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
D + TYT G + +TAPE + + T +DV+S+G+++ E++
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEA-IQYRKFTSASDVWSYGIVMWEVM 234
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 192
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 193 KFSIKSDVWAFGVLLWEIA 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 86 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 141
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 200
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 201 VWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 192
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 193 KFSIKSDVWAFGVLLWEIA 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAY-N 189
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 190 KFSIKSDVWAFGVLLWEIA 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 192
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 78
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 135
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 191
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 192 KFSIKSDVWAFGVLLWEIA 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 187
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 188 KFSIKSDVWAFGVLLWEIA 206
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 79 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 134
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 193
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 194 VWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 80 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 135
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 194
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 195 VWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ ++ KI+DFGL++L++ ++ + +TAPE + T+K+D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSD 192
Query: 218 VYSFGVMLLEIVCCRKNVDESLRDDEIV 245
V+SFG++L EIV + + + E++
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+ N L+ E+ K++DFGLS+L+ D + + +TAPE + N+ +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY-NKFS 188
Query: 214 VKADVYSFGVMLLEIV 229
+K+DV++FGV+L EI
Sbjct: 189 IKSDVWAFGVLLWEIA 204
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 192
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 193 KFSIKSDVWAFGVLLWEIA 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 38 KEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L+G
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 89
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETRII 155
C+ ++ EFM G+L + L Q ++ +A +I + YL + I
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-NKF 202
Query: 213 TVKADVYSFGVMLLEIV 229
++K+DV++FGV+L EI
Sbjct: 203 SIKSDVWAFGVLLWEIA 219
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q +S +A +I + YL +
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+ N L+ E+ K++DFGLS+L+ D + + +TAPE + N+ +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY-NKFS 188
Query: 214 VKADVYSFGVMLLEIV 229
+K+DV++FGV+L EI
Sbjct: 189 IKSDVWAFGVLLWEIA 204
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 189
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 190 KFSIKSDVWAFGVLLWEIA 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSE 100
+G G G V+ G NG ++A+K L ES F E +I+ ++ H LV L SE
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 101 GSNRLLVYEFMRNGSLGNLLFRAEQR-LSWSERRRIALEIMEGLHYLHDECETRIIHCDI 159
+V E+M GSL + L E R L +A ++ G+ Y+ IH D+
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 160 KPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVY 219
+ NIL+ KI+DFGL++L++ ++ + +TAPE + R T+K+DV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRFTIKSDVW 190
Query: 220 SFGVMLLEIVC 230
SFG++L E+V
Sbjct: 191 SFGILLTELVT 201
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-N 189
Query: 211 RITVKADVYSFGVMLLEIV 229
+ ++K+DV++FGV+L EI
Sbjct: 190 KFSIKSDVWAFGVLLWEIA 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSK 185
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+D+++FGV++ EI K E + E
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSK 186
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+D+++FGV++ EI K E + E
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+ N L+ E+ K++DFGLS+L+ D + + +TAPE + N+ +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY-NKFS 195
Query: 214 VKADVYSFGVMLLEIV 229
+K+DV++FGV+L EI
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 75
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ ++ EFM G+L + L Q ++ +A +I + YL +
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+ N L+ E+ K++DFGLS+L+ D + + +TAPE + N+ +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY-NKFS 191
Query: 214 VKADVYSFGVMLLEIV 229
+K+DV++FGV+L EI
Sbjct: 192 IKSDVWAFGVLLWEIA 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSK 181
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+D+++FGV++ EI K E + E
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 16/247 (6%)
Query: 23 RSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMK 81
R SY + ASE IG G G VYKG +G + + K++ E FRNE+
Sbjct: 25 RDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME 141
++ + H N++ +G+ ++ N +V ++ SL L E + + IA + +
Sbjct: 85 VLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGL----SKLLKTDQTRTYTVLRGT 197
G+ YLH + IIH D+K +NI + E KI DFGL S+ + Q T G+
Sbjct: 144 GMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GS 197
Query: 198 RGYTAPEL--HSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE+ NN + ++DVYS+G++L E++ D+I+ + + Y
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM--VGRGYA 255
Query: 256 AGELQNL 262
+ +L L
Sbjct: 256 SPDLSKL 262
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 21/215 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEGESE-------FRNEMKIIGRIHH 88
++++IG+GG G V+KG + K + A+K LI EGE+E F+ E+ I+ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
N+V L G +V EF+ G L + L + WS + R+ L+I G+ Y+ +
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 149 ECETRIIHCDIKPHNIL---MDESWK--AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+ I+H D++ NI +DE+ AK++DFG S+ + + L G + AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAP 195
Query: 204 E-LHSRNNRITVKADVYSFGVMLLEIVCCRKNVDE 237
E + + T KAD YSF ++L I+ DE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
E +G G G V+ G NG ++AVK L K F E ++ ++ H+ LV L
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ E+M NGSL + L +L+ ++ +A +I EG+ ++ E IH
Sbjct: 74 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 129
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
+++ NIL+ ++ KI+DFGL++L++ ++ YT G + +TAPE + T+
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT-FTI 185
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
K+DV+SFG++L EIV + + + E++
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 128/238 (53%), Gaps = 14/238 (5%)
Query: 35 ENFK--EEIGRGGSGRVYKG-CINGGKEIAVKKLIK--IVEEGESE-FRNEMKIIGRIHH 88
E+FK +G+G VY+ I+ G E+A+K + K + + G + +NE+KI ++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
++++L + + + LV E NG + L + S +E R +I+ G+ YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
I+H D+ N+L+ + KI+DFGL+ LK + YT L GT Y +PE+ +R
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATR 186
Query: 209 NNRITVKADVYSFGVMLLEIVCCRKNVD-ESLRD--DEIVLIDWAHQCYEAGELQNLV 263
+ +++DV+S G M ++ R D +++++ +++VL D+ + + E ++L+
Sbjct: 187 SAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLI 243
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 16/214 (7%)
Query: 27 YEQIV--LASENFKE---EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEM 80
YE + L E+F E E+G G G+VYK +A K+I E E E + E+
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 81 KIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIM 140
I+ H N+V L+ +N ++ EF G++ ++ E+ L+ S+ + + + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRG 199
+ L+YLHD +IIH D+K NIL K++DFG+S K +T Q R + GT
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI--GTPY 200
Query: 200 YTAPEL----HSRNNRITVKADVYSFGVMLLEIV 229
+ APE+ S++ KADV+S G+ L+E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 142
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSK 201
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+D+++FGV++ EI K E + E
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 133
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV-LMYSKFSSK 192
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+D+++FGV++ EI K E + E
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
F +E+G G G V G G ++A+K +IK E EF E K++ + H+ LV L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C++ ++ E+M NG L N L R + + ++ E + YL + + +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 142
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+ N L+++ K+SDFGLS+ + D+ + + ++ PE+ ++ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEV-LMYSKFSSK 201
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+D+++FGV++ EI K E + E
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 12 SSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE 70
+ P +EE S+ + + AS + ++ IG G SG V G + + V IK ++
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 71 EGESE-----FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
G +E F +E I+G+ H N++ L G + G ++V E+M NGSL L +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
+ + + + + G+ YL D +H D+ N+L+D + K+SDFGLS++L+
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 186 DQTRTYTVLRGTRG--YTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
D T G +TAPE + + +DV+SFGV++ E++
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 21/215 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEGESE-------FRNEMKIIGRIHH 88
++++IG+GG G V+KG + K + A+K LI EGE+E F+ E+ I+ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
N+V L G +V EF+ G L + L + WS + R+ L+I G+ Y+ +
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 149 ECETRIIHCDIKPHNIL---MDESWK--AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+ I+H D++ NI +DE+ AK++DF LS+ + + L G + AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 204 E-LHSRNNRITVKADVYSFGVMLLEIVCCRKNVDE 237
E + + T KAD YSF ++L I+ DE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ +I H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 38 KEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L+G
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 283
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETRII 155
C+ ++ EFM G+L + L Q +S +A +I + YL + I
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 340
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H ++ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-NKF 396
Query: 213 TVKADVYSFGVMLLEIVC 230
++K+DV++FGV+L EI
Sbjct: 397 SIKSDVWAFGVLLWEIAT 414
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 19/200 (9%)
Query: 41 IGRGGSGRVYKGCIN--GGKE--IAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
IG G G V G + G +E +A+K L + E+ +F E I+G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G ++ ++V E+M NGSL L + + + + + + I G+ YL D +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYV 146
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG------YTAPELHSRN 209
H D+ NIL++ + K+SDFGLS++L+ D YT TRG +TAPE +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAF- 201
Query: 210 NRITVKADVYSFGVMLLEIV 229
+ T +DV+S+G+++ E+V
Sbjct: 202 RKFTSASDVWSYGIVMWEVV 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 41 IGRGGSGRVYKGCIN--GGKEIAVK-KLIKI--VEEGESEFRNEMKIIGRIHHKNLVDLV 95
IG G G V G + G +++AV K +K+ E+ +F E I+G+ H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G + G ++V EFM NG+L L + + + + + + I G+ YL D +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYV 167
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRNNRIT 213
H D+ NIL++ + K+SDFGLS++++ D YT G +TAPE + + T
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA-IQYRKFT 226
Query: 214 VKADVYSFGVMLLEIV 229
+DV+S+G+++ E++
Sbjct: 227 SASDVWSYGIVMWEVM 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E+M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGLS++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 185
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 186 KSDVWSFGILLTELT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTIK 188
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 189 SDVWSFGILLTELT 202
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 183
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 184 KSDVWSFGILLTELT 198
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 12 SSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGC------INGGKEIAVKKL 65
S P FEE L+ F +++G+G G V + C N G+ +AVKKL
Sbjct: 2 SDPTQFEERHLK-------------FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKL 47
Query: 66 IKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRA 123
EE +F E++I+ + H N+V G C R L+ E++ GSL + L +
Sbjct: 48 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
++R+ + + +I +G+ YL + R IH D+ NIL++ + KI DFGL+K+L
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 184 KTDQTRTYTVLRGTRG--YTAPELHSRNNRITVKADVYSFGVMLLEI 228
D+ G + APE + ++ +V +DV+SFGV+L E+
Sbjct: 165 PQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYEL 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTIK 361
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 362 SDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTIK 361
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 362 SDVWSFGILLTELT 375
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 26/236 (11%)
Query: 9 RQVSSPDVFEEI--KLRSFSYEQIVLASENFKEEIGRGGSGRVYKG--CINGGKEIAVKK 64
R P FE+ +R F+ E I + ++ IG G G V G + G +EI V
Sbjct: 4 RTFVDPFTFEDPNQAVREFAKE-IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVA- 61
Query: 65 LIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNL 119
IK ++ G ++ F +E I+G+ H N++ L G ++ +++ E+M NGSL
Sbjct: 62 -IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 120 LFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGL 179
L + + R + + + I G+ YL D +H D+ NIL++ + K+SDFG+
Sbjct: 121 LRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 180 SKLLKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
S++L+ D YT TRG +TAPE + + T +DV+S+G+++ E++
Sbjct: 178 SRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVM 228
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E+M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGLS++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 11 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 62
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E+M NGSL + L + + + + +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 177
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 178 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 27 YEQIV--LASENFKE---EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEM 80
YE + L E+F E E+G G G+VYK +A K+I E E E + E+
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 81 KIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIM 140
I+ H N+V L+ +N ++ EF G++ ++ E+ L+ S+ + + + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRG 199
+ L+YLHD +IIH D+K NIL K++DFG+S K + Q R + GT
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI--GTPY 200
Query: 200 YTAPEL----HSRNNRITVKADVYSFGVMLLEIV 229
+ APE+ S++ KADV+S G+ L+E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 28 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 79
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E+M NGSL + L + + + + +
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 140 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 194
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 195 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 232
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E+M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGLS++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 107/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 27 YEQIV--LASENFKE---EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEM 80
YE + L E+F E E+G G G+VYK +A K+I E E E + E+
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 81 KIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIM 140
I+ H N+V L+ +N ++ EF G++ ++ E+ L+ S+ + + + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRG 199
+ L+YLHD +IIH D+K NIL K++DFG+S K + Q R + GT
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI--GTPY 200
Query: 200 YTAPEL----HSRNNRITVKADVYSFGVMLLEIV 229
+ APE+ S++ KADV+S G+ L+E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D+ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 40 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 91
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E+M NGSL + L + + + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 152 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 206
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 207 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 18 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 194 T-ESKFSVASDVWSFGVVLYEL 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 40 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 91
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E+M NGSL + L + + + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 152 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 206
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 207 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 38 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 89
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E+M NGSL + L + + + + +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 149
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 150 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 204
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 205 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 242
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 13 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 189 T-ESKFSVASDVWSFGVVLYEL 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 38 KEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L+G
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 280
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETRII 155
C+ ++ EFM G+L + L Q ++ +A +I + YL + I
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 337
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H ++ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-NKF 393
Query: 213 TVKADVYSFGVMLLEIVC 230
++K+DV++FGV+L EI
Sbjct: 394 SIKSDVWAFGVLLWEIAT 411
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 27 YEQIV--LASENFKEEIGR-GGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEMKI 82
YE + L E+F E IG G G+VYK +A K+I E E E + E+ I
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ H N+V L+ +N ++ EF G++ ++ E+ L+ S+ + + + ++
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 120
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTR 198
L+YLHD +IIH D+K NIL K++DFG+S TRT R GT
Sbjct: 121 LNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTP 173
Query: 199 GYTAPEL----HSRNNRITVKADVYSFGVMLLEIV 229
+ APE+ S++ KADV+S G+ L+E+
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 250 E-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTIK 361
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 362 SDVWSFGILLTELT 375
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 12 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 188 T-ESKFSVASDVWSFGVVLYEL 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 14 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 190 T-ESKFSVASDVWSFGVVLYEL 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + ++ +I G+ Y+ +H D
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTIK 192
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 193 SDVWSFGILLTELT 206
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 45 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 221 T-ESKFSVASDVWSFGVVLYEL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 19 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 195 T-ESKFSVASDVWSFGVVLYEL 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 38 KEEIGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
K ++G G G VY+G +AVK L + E E EF E ++ I H NLV L+G
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 322
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETRII 155
C+ ++ EFM G+L + L Q ++ +A +I + YL + I
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 379
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H ++ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAY-NKF 435
Query: 213 TVKADVYSFGVMLLEIVC 230
++K+DV++FGV+L EI
Sbjct: 436 SIKSDVWAFGVLLWEIAT 453
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E+M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGL+++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 20 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 196 T-ESKFSVASDVWSFGVVLYEL 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 17 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 193 T-ESKFSVASDVWSFGVVLYEL 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 7/191 (3%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADV 218
++ NIL+ E+ K++DFGL++L++ ++ + +TAPE + R T+K+DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRFTIKSDV 188
Query: 219 YSFGVMLLEIV 229
+SFG++L E+
Sbjct: 189 WSFGILLTELT 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + +A +I G+ Y+ +H D
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+K
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEA-ALYGRFTIK 444
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 445 SDVWSFGILLTELT 458
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 21 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 197 T-ESKFSVASDVWSFGVVLYEL 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 12 SSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGC------INGGKEIAVKKL 65
S P FEE L+ F +++G+G G V + C N G+ +AVKKL
Sbjct: 2 SDPTQFEERHLK-------------FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKL 47
Query: 66 IKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRA 123
EE +F E++I+ + H N+V G C R L+ E++ GSL + L +
Sbjct: 48 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
++R+ + + +I +G+ YL + R IH D+ NIL++ + KI DFGL+K+L
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 184 KTDQTRTYTVLRGTRG--YTAPELHSRNNRITVKADVYSFGVMLLEI 228
D+ G + APE + ++ +V +DV+SFGV+L E+
Sbjct: 165 PQDKEFFKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYEL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 32 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 208 T-ESKFSVASDVWSFGVVLYEL 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F ++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 17 FLRQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ EF+ GSL L + ++R+ + + +I +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 193 T-ESKFSVASDVWSFGVVLYEL 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 32 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 208 TE-SKFSVASDVWSFGVVLYEL 228
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
D++ NIL+ E+ K++DFGL++L++ ++ + +TAPE + R T+K+D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE-AALYGRFTIKSD 197
Query: 218 VYSFGVMLLEIV 229
V+SFG++L E+
Sbjct: 198 VWSFGILLTELT 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L K F E +++ ++ H+ LV L S
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M GSL + L + E + L + +A +I G+ Y+ +H
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL +L++ ++ YT +G + +TAPE + R T+
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 361
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 362 KSDVWSFGILLTELT 376
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 114/213 (53%), Gaps = 17/213 (7%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGESE-----FRNEM 80
++I ++ ++ IG G G V G + G +EI V IK ++ G +E F +E
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVA--IKTLKSGYTEKQRRDFLSEA 59
Query: 81 KIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIM 140
I+G+ H N++ L G ++ + +++ EFM NGSL + L + + + + + + I
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 119
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-RTYTVLRGTR- 198
G+ YL D +H + NIL++ + K+SDFGLS+ L+ D + TYT G +
Sbjct: 120 AGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 199 --GYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
+TAPE + + T +DV+S+G+++ E++
Sbjct: 177 PIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M G L + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGLS++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 9 RQVSSPDVFEEIKLRSFSYEQIVLASE-NFKEEIGRGGSGRVYKGCIN--GGKEIAVK-K 64
R P FE+ + + + A+ + + +G G G V G + KEI+V K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 65 LIKI--VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR 122
+K+ E+ +F E I+G+ H N++ L G ++ ++V E+M NGSL + L +
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 123 AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+ + + + + I G+ YL D +H D+ NIL++ + K+SDFGL ++
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 183 LKTDQTRTYTVLRGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
L+ D YT TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 197 LEDDPEAAYT----TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 36 NFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
K ++G G G VY G +AVK L + E E EF E ++ I H NLV L
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 93
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLHDECETR 153
+G C+ +V E+M G+L + L + ++ +A +I + YL +
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---N 150
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNN 210
IH D+ N L+ E+ K++DFGLS+L+ D TYT G + +TAPE + N
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNT 207
Query: 211 RITVKADVYSFGVMLLEIV 229
++K+DV++FGV+L EI
Sbjct: 208 -FSIKSDVWAFGVLLWEIA 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 15/195 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
E +V E+M G L + L + E + L + +A +I G+ Y+ +H
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ NIL+ E+ K++DFGL++L++ ++ YT +G + +TAPE + R T+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPE-AALYGRFTI 194
Query: 215 KADVYSFGVMLLEIV 229
K+DV+SFG++L E+
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 41 IGRGGSGRVYKG--CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
IG G G V G + G +EI V IK ++ G ++ F +E I+G+ H N++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVA--IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
L G ++ +++ E+M NGSL L + + R + + + I G+ YL D
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MS 130
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG------YTAPELHS 207
+H D+ NIL++ + K+SDFG+S++L+ D YT TRG +TAPE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIA 186
Query: 208 RNNRITVKADVYSFGVMLLEIV 229
+ T +DV+S+G+++ E++
Sbjct: 187 Y-RKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 41 IGRGGSGRVYKG--CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
IG G G V G + G +EI V IK ++ G ++ F +E I+G+ H N++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVA--IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
L G ++ +++ E+M NGSL L + + R + + + I G+ YL D
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MS 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG------YTAPELHS 207
+H D+ NIL++ + K+SDFG+S++L+ D YT TRG +TAPE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIA 192
Query: 208 RNNRITVKADVYSFGVMLLEIV 229
+ T +DV+S+G+++ E++
Sbjct: 193 Y-RKFTSASDVWSYGIVMWEVM 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 11 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 62
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E M NGSL + L + + + + +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 177
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 178 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
++G+G G V+ G NG +A+K L E+ F E +++ ++ H+ LV L S
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 100 EGSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
E +V E+M GSL + L + L + ++ +I G+ Y+ +H D
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVK 215
++ NIL+ E+ K++DFGL++L++ ++ +T +G + +TAPE + R T+K
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNE---WTARQGAKFPIKWTAPE-AALYGRFTIK 192
Query: 216 ADVYSFGVMLLEIV 229
+DV+SFG++L E+
Sbjct: 193 SDVWSFGILLTELT 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 25/221 (11%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVK-KLIKI--VEEGES 74
+E+ + S +++V A E G SGR+ + KEI+V K +K+ E+
Sbjct: 40 KELDATNISIDKVVGAGE-----FGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRR 91
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
+F E I+G+ H N++ L G ++ ++V E M NGSL + L + + + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
+ I G+ YL D +H D+ NIL++ + K+SDFGLS++L+ D YT
Sbjct: 152 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-- 206
Query: 195 RGTRG------YTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TRG +T+PE + + T +DV+S+G++L E++
Sbjct: 207 --TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVM 244
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 17 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L +R+ + + +I +G+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH D+ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 193 T-ESKFSVASDVWSFGVVLYEL 213
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKGL 193
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 194 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 247
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + N+RPT +++ +++ + P
Sbjct: 248 GGYL-----DQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHP 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 37 FKEEIGRGGSGRVYKGC------INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
F +++G+G G V + C N G+ +AVKKL EE +F E++I+ + H N
Sbjct: 15 FLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 91 LVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+V G C R L+ E++ GSL + L + ++R+ + + +I +G+ YL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELH 206
+ R IH ++ NIL++ + KI DFGL+K+L D+ G + APE
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+ ++ +V +DV+SFGV+L E+
Sbjct: 191 TE-SKFSVASDVWSFGVVLYEL 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 23/228 (10%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKE-----IAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
K E+G G G+V+ C N E +AVK L + +F E +++ + H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--------FRAE----QRLSWSERRRIALE 138
+V G C EG ++V+E+M++G L L AE L+ S+ IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGT 197
I G+ YL + +H D+ N L+ E+ KI DFG+S+ + TD R
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 198 RGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ PE + T ++DV+S GV+L EI K L ++E++
Sbjct: 194 IRWMPPE-SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 203
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV-------LIDWA 250
+ +PE ++ T +DV+SFGV+L EI + + L +++++ L+D
Sbjct: 204 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262
Query: 251 HQC 253
C
Sbjct: 263 DNC 265
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR-----KGGKGLLP 197
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV-------LIDWA 250
+ +PE ++ T +DV+SFGV+L EI + + L +++++ L+D
Sbjct: 198 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 256
Query: 251 HQC 253
C
Sbjct: 257 DNC 259
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 196
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 197 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 196
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 197 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR-----KGGKGLLP 188
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 189 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 190
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 191 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 194
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 195 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 197
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 198 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLVDLVGFC 98
E+G G G+VYK +A K+I+ E E E + E++I+ H +V L+G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ EF G++ ++ ++ L+ + + + +++E L++LH + RIIH D
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 134
Query: 159 IKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAPEL----HSRNNRIT 213
+K N+LM +++DFG+S K LKT Q R + GT + APE+ ++
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYD 192
Query: 214 VKADVYSFGVMLLEIV 229
KAD++S G+ L+E+
Sbjct: 193 YKADIWSLGITLIEMA 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLV 95
E+IG G G VYK N G+ A+KK I++ +E E S E+ I+ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKK-IRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
+LV+E + + L LL E L + L+++ G+ Y HD R++
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+KP N+L++ + KI+DFGL++ R YT T Y AP++ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 216 ADVYSFGVMLLEIV 229
D++S G + E+V
Sbjct: 182 IDIWSVGCIFAEMV 195
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLV 95
E+IG G G VYK N G+ A+KK I++ +E E S E+ I+ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKK-IRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
+LV+E + + L LL E L + L+++ G+ Y HD R++
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+KP N+L++ + KI+DFGL++ R YT T Y AP++ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 216 ADVYSFGVMLLEIV 229
D++S G + E+V
Sbjct: 182 IDIWSVGCIFAEMV 195
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 174 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 225
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 226 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 272
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRL---------SWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L + S S+ ++A EI +G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 203
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 204 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLVDLVGFC 98
E+G G G+VYK +A K+I+ E E E + E++I+ H +V L+G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ EF G++ ++ ++ L+ + + + +++E L++LH + RIIH D
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRD 142
Query: 159 IKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAPEL----HSRNNRIT 213
+K N+LM +++DFG+S K LKT Q R + GT + APE+ ++
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYD 200
Query: 214 VKADVYSFGVMLLEIV 229
KAD++S G+ L+E+
Sbjct: 201 YKADIWSLGITLIEMA 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKL-IKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVG 96
E++G G G VYK + G+ +A+K++ + +EG S E+ ++ +HH N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
LV+EFM L +L + L S+ + +++ G+ + H + RI+H
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILH 142
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L++ K++DFGL++ R+YT T Y AP++ + + +
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 217 DVYSFGVMLLEIVCCRKNVDESLRDDEI 244
D++S G + E++ + DD++
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLV 95
E+IG G G VYK N G+ A+KK I++ +E E S E+ I+ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKK-IRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
+LV+E + + L LL E L + L+++ G+ Y HD R++
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+KP N+L++ + KI+DFGL++ R YT T Y AP++ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 216 ADVYSFGVMLLEIV 229
D++S G + E+V
Sbjct: 182 IDIWSVGCIFAEMV 195
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H ++ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 143 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----KGGKGL 194
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 195 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 248
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + N+RPT +++ +++ + P
Sbjct: 249 GGYL-----DQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHP 293
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKL-IKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVG 96
E++G G G VYK + G+ +A+K++ + +EG S E+ ++ +HH N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
LV+EFM L +L + L S+ + +++ G+ + H + RI+H
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILH 142
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L++ K++DFGL++ R+YT T Y AP++ + + +
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 217 DVYSFGVMLLEIVCCRKNVDESLRDDEI 244
D++S G + E++ + DD++
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 31 VLASENFKEEIGRGGSGRVYKGC-INGGKEIAVKKLIK-IVEEGESEFRNEMKIIGRIHH 88
+L E IG GG +V C I G+ +A+K + K + + E++ + + H
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRH 67
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+++ L + +V E+ G L + + ++ RLS E R + +I+ + Y+H
Sbjct: 68 QHICQLYHVLETANKIFMVLEYCPGGELFDYII-SQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
+ H D+KP N+L DE K K+ DFGL K ++ G+ Y APEL
Sbjct: 127 QGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 209 NNRITVKADVYSFGVMLLEIVC 230
+ + +ADV+S G++L ++C
Sbjct: 184 KSYLGSEADVWSMGILLYVLMC 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 30/256 (11%)
Query: 11 VSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKG-CINGGKE-----IAVKK 64
+ +P F + + IVL K E+G G G+V+ C N E +AVK
Sbjct: 24 IENPQYFSDACVHHIKRRDIVL-----KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA 78
Query: 65 LIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR-- 122
L + E +F+ E +++ + H+++V G C+EG L+V+E+MR+G L L
Sbjct: 79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138
Query: 123 ------------AEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
A L + +A ++ G+ YL +H D+ N L+ +
Sbjct: 139 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGL 195
Query: 171 KAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
KI DFG+S+ + TD R + PE + T ++DV+SFGV+L EI
Sbjct: 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE-SILYRKFTTESDVWSFGVVLWEIF 254
Query: 230 CCRKNVDESLRDDEIV 245
K L + E +
Sbjct: 255 TYGKQPWYQLSNTEAI 270
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKGL 193
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 194 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 247
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + +RPT +++ +++ + P
Sbjct: 248 GGYL-----DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 139 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKGL 190
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 191 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 244
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + +RPT +++ +++ + P
Sbjct: 245 GGYL-----DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHP 289
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRL---------SWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L + S S+ ++A EI +G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N ++ E + KI DFG+++ + +TD R +G +G
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 193
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 194 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 240
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H ++ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 142 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----KGGKGL 193
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 194 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 247
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + N+RPT +++ +++ + P
Sbjct: 248 GGYL-----DQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHP 292
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 30/290 (10%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCIN--GGKE--IAVKKLIK-IVEEGESEFRNEMKI 82
++I ++ +E IG G G V +G + G KE +A+K L E EF +E I
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+G+ H N++ L G + +++ EFM NG+L + L + + + + + I G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-RTYTVLRGTR--- 198
+ YL E +H D+ NIL++ + K+SDFGLS+ L+ + + TYT G +
Sbjct: 129 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 199 GYTAPELHSRNNRITVKADVYSFGVMLLEIVCC--RKNVDESLRDDEIVLIDWAHQCYEA 256
+TAPE + + T +D +S+G+++ E++ R D S +D +I+ Q Y
Sbjct: 186 RWTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD----VINAIEQDYRL 240
Query: 257 GELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIV 306
+ + +L ++ L C + + N RP QV+ ++ ++
Sbjct: 241 PPPPDCPT-----------SLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
S +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 106/184 (57%), Gaps = 17/184 (9%)
Query: 55 NGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLVGFCSE--GSNRLLVYE 109
N G+++AVK L E G ++ + E++I+ ++H+N+V G C+E G+ L+ E
Sbjct: 48 NTGEQVAVKSLKP--ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 110 FMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDES 169
F+ +GSL L + + +++ ++ + A++I +G+ YL + +H D+ N+L++
Sbjct: 106 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESE 162
Query: 170 WKAKISDFGLSKLLKTDQTRTYTVLRGTRG----YTAPELHSRNNRITVKADVYSFGVML 225
+ KI DFGL+K ++TD + ++ R + APE + ++ + +DV+SFGV L
Sbjct: 163 HQVKIGDFGLTKAIETD--KEXXTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTL 219
Query: 226 LEIV 229
E++
Sbjct: 220 HELL 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----KGGKGL 193
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 194 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 247
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + +RPT +++ +++ + P
Sbjct: 248 GGYL-----DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 14 PDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRV----YKGC-INGGKEIAVKKLIKI 68
P +FEE L+ S ++G+G G V Y N G +AVK+L
Sbjct: 4 PTIFEERHLKYIS-------------QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS 50
Query: 69 VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRL---LVYEFMRNGSLGNLLFRAEQ 125
+ + +F+ E++I+ +H +V G S G R LV E++ +G L + L R
Sbjct: 51 GPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 109
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
RL S + +I +G+ YL R +H D+ NIL++ KI+DFGL+KLL
Sbjct: 110 RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 166
Query: 186 DQTRTYTVLR----GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC-CRKNVDES 238
D + Y V+R + APE S +N + ++DV+SFGV+L E+ C K+ S
Sbjct: 167 D--KDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 14 PDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRV----YKGC-INGGKEIAVKKLIKI 68
P +FEE L+ S ++G+G G V Y N G +AVK+L
Sbjct: 17 PTIFEERHLKYIS-------------QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS 63
Query: 69 VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRL---LVYEFMRNGSLGNLLFRAEQ 125
+ + +F+ E++I+ +H +V G S G R LV E++ +G L + L R
Sbjct: 64 GPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 122
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
RL S + +I +G+ YL R +H D+ NIL++ KI+DFGL+KLL
Sbjct: 123 RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179
Query: 186 DQTRTYTVLR----GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC-CRKNVDES 238
D + Y V+R + APE S +N + ++DV+SFGV+L E+ C K+ S
Sbjct: 180 D--KDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 31/228 (13%)
Query: 40 EIGRGGSGRVYKGCING--GKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLV 92
E+G+G G VY+G G E + IK V E S EF NE ++ + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIMEGL 143
L+G S+G L++ E M G L + L R E S S+ ++A EI +G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG--- 199
YL+ + +H D+ N + E + KI DFG+++ + +TD R +G +G
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLP 190
Query: 200 --YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ +PE ++ T +DV+SFGV+L EI + + L +++++
Sbjct: 191 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 14 PDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRV----YKGC-INGGKEIAVKKLIKI 68
P +FEE L+ S ++G+G G V Y N G +AVK+L
Sbjct: 5 PTIFEERHLKYIS-------------QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS 51
Query: 69 VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRL---LVYEFMRNGSLGNLLFRAEQ 125
+ + +F+ E++I+ +H +V G S G R LV E++ +G L + L R
Sbjct: 52 GPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 110
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
RL S + +I +G+ YL R +H D+ NIL++ KI+DFGL+KLL
Sbjct: 111 RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 167
Query: 186 DQTRTYTVLR----GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC-CRKNVDES 238
D + Y V+R + APE S +N + ++DV+SFGV+L E+ C K+ S
Sbjct: 168 D--KDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 106/184 (57%), Gaps = 17/184 (9%)
Query: 55 NGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLVGFCSE--GSNRLLVYE 109
N G+++AVK L E G ++ + E++I+ ++H+N+V G C+E G+ L+ E
Sbjct: 36 NTGEQVAVKSLKP--ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 110 FMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDES 169
F+ +GSL L + + +++ ++ + A++I +G+ YL + +H D+ N+L++
Sbjct: 94 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESE 150
Query: 170 WKAKISDFGLSKLLKTDQTRTYTVLRGTRG----YTAPELHSRNNRITVKADVYSFGVML 225
+ KI DFGL+K ++TD + ++ R + APE + ++ + +DV+SFGV L
Sbjct: 151 HQVKIGDFGLTKAIETD--KEXXTVKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTL 207
Query: 226 LEIV 229
E++
Sbjct: 208 HELL 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 58 KEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSL 116
K +A+K + K EG E NE+ ++ +I H N+V L G + L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 117 GNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECETRIIHCDIKPHNIL---MDESWK 171
+ R ++ ++ER R+ ++++ + YLHD I+H D+KP N+L +DE K
Sbjct: 104 FD---RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSK 157
Query: 172 AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
ISDFGLSK+ D + GT GY APE+ ++ + D +S GV+ ++C
Sbjct: 158 IMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLC 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 29 QIVLASENFKE------EIGRGGSGRVYKGCI----NGGKEIAVKKLIKIVEEGESEFRN 78
Q+V++ + +E +IG G +G V CI + GK++AVKK+ ++ N
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLFN 91
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ HH N+VD+ G +V EF+ G+L +++ R++ + + L
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLS 149
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR 198
++ L YLH++ +IH DIK +IL+ + K+SDFG + + + L GT
Sbjct: 150 VLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KXLVGTP 205
Query: 199 GYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
+ APE+ SR T + D++S G+M++E++
Sbjct: 206 YWMAPEVISRLPYGT-EVDIWSLGIMVIEMI 235
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRG- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ + +TD R +G +G
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----KGGKGL 192
Query: 200 ----YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYE 255
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 193 LPVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMD 246
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + +RPT +++ +++ + P
Sbjct: 247 GGYL-----DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHP 291
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 58 KEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSL 116
K +A+K + K EG E NE+ ++ +I H N+V L G + L+ + + S
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV---SG 100
Query: 117 GNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECETRIIHCDIKPHNIL---MDESWK 171
G L R ++ ++ER R+ ++++ + YLHD I+H D+KP N+L +DE K
Sbjct: 101 GELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSK 157
Query: 172 AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
ISDFGLSK+ D + GT GY APE+ ++ + D +S GV+ ++C
Sbjct: 158 IMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLC 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSE 100
+G G G V+ G N ++AVK L K F E ++ + H LV L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 101 GSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHCDI 159
++ E+M GSL + L E ++ + + +I EG+ Y+ IH D+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 160 KPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVKA 216
+ N+L+ ES KI+DFGL+++++ ++ YT G + +TAPE + T+K+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGC-FTIKS 192
Query: 217 DVYSFGVMLLEIVCCRK 233
DV+SFG++L EIV K
Sbjct: 193 DVWSFGILLYEIVTYGK 209
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 58 KEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSL 116
K +A+K + K EG E NE+ ++ +I H N+V L G + L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 117 GNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECETRIIHCDIKPHNIL---MDESWK 171
+ R ++ ++ER R+ ++++ + YLHD I+H D+KP N+L +DE K
Sbjct: 104 FD---RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSK 157
Query: 172 AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
ISDFGLSK+ D + GT GY APE+ ++ + D +S GV+ ++C
Sbjct: 158 IMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLC 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+++G G G V+ G N ++AVK L K F E ++ + H LV L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQ-RLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
++ ++ EFM GSL + L E ++ + + +I EG+ Y+ + IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITV 214
D++ N+L+ ES KI+DFGL+++++ ++ YT G + +TAPE + T+
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGC-FTI 189
Query: 215 KADVYSFGVMLLEIVCCRK 233
K++V+SFG++L EIV K
Sbjct: 190 KSNVWSFGILLYEIVTYGK 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L +E + + IA + G+ YLH + IIH D
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ +N + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 216 ADVYSFGVMLLEIVC 230
+DVY+FG++L E++
Sbjct: 194 SDVYAFGIVLYELMT 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTR-----TYTVLRGTRGYTAPEL--HSRNNR 211
+K +NI + E KI DFGL+ T+++R + L G+ + APE+ N
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ ++DVY+FG++L E++ + D+I+ +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 58 KEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSL 116
K +A+K + K EG E NE+ ++ +I H N+V L G + L+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 117 GNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECETRIIHCDIKPHNIL---MDESWK 171
+ R ++ ++ER R+ ++++ + YLHD I+H D+KP N+L +DE K
Sbjct: 104 FD---RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSK 157
Query: 172 AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
ISDFGLSK+ D + GT GY APE+ ++ + D +S GV+ ++C
Sbjct: 158 IMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLC 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
S +V ++ SL + L +E + + IA + G+ YLH + IIH D
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTR-----TYTVLRGTRGYTAPEL--HSRNNR 211
+K +NI + E KI DFGL+ T+++R + L G+ + APE+ +N
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 212 ITVKADVYSFGVMLLEIVC 230
+ ++DVY+FG++L E++
Sbjct: 202 YSFQSDVYAFGIVLYELMT 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 29/236 (12%)
Query: 14 PDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRV----YKGC-INGGKEIAVKKLIKI 68
P +FEE L+ S ++G+G G V Y N G +AVK+L
Sbjct: 1 PTIFEERHLKYIS-------------QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS 47
Query: 69 VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRL---LVYEFMRNGSLGNLLFRAEQ 125
+ + +F+ E++I+ +H +V G S G R LV E++ +G L + L R
Sbjct: 48 GPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRA 106
Query: 126 RLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT 185
RL S + +I +G+ YL R +H D+ NIL++ KI+DFGL+KLL
Sbjct: 107 RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 163
Query: 186 DQTRTYTVLRGTRG--YTAPELHSRNNRITVKADVYSFGVMLLEIVC-CRKNVDES 238
D+ G + APE S +N + ++DV+SFGV+L E+ C K+ S
Sbjct: 164 DKDXXVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 46/292 (15%)
Query: 40 EIGRGGSGRVYKG----CINGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKN 90
E+G+G G VY+G I G E V +K V E S EF NE ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVA--VKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQR-------LSWSERRRIALEIME 141
+V L+G S+G L+V E M +G L + L R E + E ++A EI +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-- 199
G+ YL+ + + +H D+ N ++ + KI DFG+++ D T +G +G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLL 194
Query: 200 ---YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEA 256
+ APE ++ T +D++SFGV+L EI + + L +++++ +
Sbjct: 195 PVRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMDG 248
Query: 257 GELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
G L DQ D E +L+++ C + +RPT +++ +++ + P
Sbjct: 249 GYL-----DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKE-----IAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
K E+G G G+V+ C N E +AVK L + E +F+ E +++ + H++
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR--------------AEQRLSWSERRRIA 136
+V G C+EG L+V+E+MR+G L L A L + +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLR 195
++ G+ YL +H D+ N L+ + KI DFG+S+ + TD R
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 196 GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ PE + T ++DV+SFGV+L EI K L + E +
Sbjct: 199 LPIRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L +E + + IA + G+ YLH + IIH D
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTR-----TYTVLRGTRGYTAPEL--HSRNNR 211
+K +NI + E KI DFGL+ T+++R + L G+ + APE+ +N
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 212 ITVKADVYSFGVMLLEIVC 230
+ ++DVY+FG++L E++
Sbjct: 202 YSFQSDVYAFGIVLYELMT 220
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTR-----TYTVLRGTRGYTAPEL--HSRNNR 211
+K +NI + E KI DFGL+ T+++R + L G+ + APE+ N
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ ++DVY+FG++L E++ + D+I+ +
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKE-----IAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
K E+G G G+V+ C N E +AVK L + E +F+ E +++ + H++
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR--------------AEQRLSWSERRRIA 136
+V G C+EG L+V+E+MR+G L L A L + +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLR 195
++ G+ YL +H D+ N L+ + KI DFG+S+ + TD R
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 196 GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ PE + T ++DV+SFGV+L EI K L + E +
Sbjct: 193 LPIRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 159 IKPHNILMDESWKAKISDFGLSKL-LKTDQTRTYTVLRGTRGYTAPEL--HSRNNRITVK 215
+K +NI + E KI DFGL+ + + + + L G+ + APE+ N + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 216 ADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+DVY+FG++L E++ + D+I+ +
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 35/298 (11%)
Query: 22 LRSFSYEQIVLASENFKEEIGRGGSGRVYKGCIN--GGKE--IAVKKLIK-IVEEGESEF 76
+R F+ E I ++ +E IG G G V +G + G KE +A+K L E EF
Sbjct: 6 VREFAKE-IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREF 64
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
+E I+G+ H N++ L G + +++ EFM NG+L + L + + + + +
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLK---TDQTRTYTV 193
I G+ YL E +H D+ NIL++ + K+SDFGLS+ L+ +D T T ++
Sbjct: 125 RGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 194 LRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCC--RKNVDESLRDDEIVLID 248
G + +TAPE + + T +D +S+G+++ E++ R D S +D +I+
Sbjct: 182 --GGKIPIRWTAPEAIAF-RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD----VIN 234
Query: 249 WAHQCYEAGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIV 306
Q Y + + +L ++ L C + + N RP QV+ ++ ++
Sbjct: 235 AIEQDYRLPPPPDCPT-----------SLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKE-----IAVKKLIKIVEEGESEFRNEMKIIGRIHHKN 90
K E+G G G+V+ C N +AVK L +F+ E +++ + H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRLSWSERRRI 135
+V G C +G ++V+E+M++G L L +A+ L S+ I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 136 ALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVL 194
A +I G+ YL + +H D+ N L+ + KI DFG+S+ + TD R
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ PE + T ++DV+SFGV+L EI K L + E++
Sbjct: 196 MLPIRWMPPE-SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 245
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG G G VYKG +G + + + + F+NE+ ++ + H N++ +G+
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
++ +V ++ SL + L E + + IA + +G+ YLH + IIH D
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTR-----TYTVLRGTRGYTAPEL--HSRNNR 211
+K +NI + E KI DFGL+ T+++R + L G+ + APE+ N
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ ++DVY+FG++L E++ + D+I+ +
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 42/284 (14%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR-AEQRLSWSERRRIAL--------EI 139
+N+V+L+G C+ G L++ E+ G L N L R AE L + R + L ++
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR- 198
+G+ +L IH D+ N+L+ AKI DFGL++ + D Y V R
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYIVKGNARL 216
Query: 199 --GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEA 256
+ APE + TV++DV+S+G++L EI N +L++
Sbjct: 217 PVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------ILVN-------- 261
Query: 257 GELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQV 298
+ LV D + F +N+ I C E RPT +Q+
Sbjct: 262 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 42/284 (14%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR-AEQRLSWSERRRIAL--------EI 139
+N+V+L+G C+ G L++ E+ G L N L R AE L + R + L ++
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR- 198
+G+ +L IH D+ N+L+ AKI DFGL++ + D Y V R
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYIVKGNARL 224
Query: 199 --GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEA 256
+ APE + TV++DV+S+G++L EI N +L++
Sbjct: 225 PVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------ILVN-------- 269
Query: 257 GELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQV 298
+ LV D + F +N+ I C E RPT +Q+
Sbjct: 270 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 23 RSFSYEQIVLASENF--KEEIGRGGSGRVYKGCINGGKEIAVKKLIK--IVEEGESEFRN 78
R+ ++ VL E+ E+IGRG G V+ G + + K + + + +++F
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E +I+ + H N+V L+G C++ +V E ++ G L RL ++ +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR 198
G+ YL +C IH D+ N L+ E KISDFG+S + + Y G R
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVYAASGGLR 275
Query: 199 ----GYTAPELHSRNNRITVKADVYSFGVMLLE 227
+TAPE + R + ++DV+SFG++L E
Sbjct: 276 QVPVKWTAPEALN-YGRYSSESDVWSFGILLWE 307
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 19 EIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE--- 75
++K R+ YE++ + +G G VYK +I K IK+ E++
Sbjct: 4 DVKSRAKRYEKL--------DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI 55
Query: 76 ---FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
E+K++ + H N++ L+ SN LV++FM L ++ L+ S
Sbjct: 56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHI 114
Query: 133 RRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYT 192
+ L ++GL YLH I+H D+KP+N+L+DE+ K++DFGL+K + R Y
Sbjct: 115 KAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYX 170
Query: 193 VLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
TR Y APEL V D+++ G +L E++
Sbjct: 171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 48/295 (16%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR---------------AEQRLSWSERR 133
+N+V+L+G C+ G L++ E+ G L N L R E++LS +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L IH D+ N+L+ AKI DFGL++ + D Y V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYIV 224
Query: 194 LRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWA 250
R + APE + TV++DV+S+G++L EI L +L++
Sbjct: 225 KGNARLPVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILVN-- 275
Query: 251 HQCYEAGELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQVIWMME 303
+ LV D + F +N+ I C E RPT +Q+ ++
Sbjct: 276 ------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG+G G V G G K +AVK + + F E ++ ++ H NLV L+G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 99 SEGSNRL-LVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
E L +V E+M GSL + L R L + +L++ E + YL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 125
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+ N+L+ E AK+SDFGL+K + Q ++ +TAPE R + + K+
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPE-ALREKKFSTKS 180
Query: 217 DVYSFGVMLLEI 228
DV+SFG++L EI
Sbjct: 181 DVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG+G G V G G K +AVK + + F E ++ ++ H NLV L+G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 99 SEGSNRL-LVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
E L +V E+M GSL + L R L + +L++ E + YL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+ N+L+ E AK+SDFGL+K + Q ++ +TAPE R + + K+
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEA-LREKKFSTKS 367
Query: 217 DVYSFGVMLLEI 228
DV+SFG++L EI
Sbjct: 368 DVWSFGILLWEI 379
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG+G G V G G K +AVK + + F E ++ ++ H NLV L+G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 99 SEGSNRL-LVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
E L +V E+M GSL + L R L + +L++ E + YL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+ N+L+ E AK+SDFGL+K + Q ++ +TAPE R + + K+
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPE-ALREKKFSTKS 195
Query: 217 DVYSFGVMLLEI 228
DV+SFG++L EI
Sbjct: 196 DVWSFGILLWEI 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 46/288 (15%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR-------------AEQRLSWSERRRI 135
+N+V+L+G C+ G L++ E+ G L N L R A LS +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 136 ALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR 195
+ ++ +G+ +L IH D+ N+L+ AKI DFGL++ + D Y V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYIVKG 224
Query: 196 GTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQ 252
R + APE + TV++DV+S+G++L EI L +L++
Sbjct: 225 NARLPVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILVN---- 273
Query: 253 CYEAGELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQV 298
+ LV D + F +N+ I C E RPT +Q+
Sbjct: 274 ----SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+IG+G SG VY + G+E+A++++ + + NE+ ++ + N+V+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
G +V E++ GSL +++ E + + + E ++ L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
DIK NIL+ K++DFG + +Q++ T++ GT + APE+ +R K D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTR-KAYGPKVD 198
Query: 218 VYSFGVMLLEIV 229
++S G+M +E++
Sbjct: 199 IWSLGIMAIEMI 210
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 39 EEIGRGGSGRVYKGCIN-GGKEIAVKKL-------IKIVEEGESEFRNEMKIIGRIHHKN 90
+ +G G G+V G G ++AVK L + +V + R E++ + H +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVV----GKIRREIQNLKLFRHPH 77
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
++ L S S+ +V E++ G L + + + RL E RR+ +I+ G+ Y H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNN 210
++H D+KP N+L+D AKI+DFGLS ++ + + G+ Y APE+ S
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRL 191
Query: 211 RITVKADVYSFGVMLLEIVCCRKNVDE 237
+ D++S GV+L ++C D+
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 41 IGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEG--ESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V K C N G+ +A+KK ++ ++ + E+K++ ++ H+NLV+L+
Sbjct: 33 VGEGSYGMVMK-CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 97 FCSEGSNRLLVYEFMRNGSLGNL-LFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
C + LV+EF+ + L +L LF L + ++ +I+ G+ + H II
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH---NII 146
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H DIKP NIL+ +S K+ DFG ++ L Y TR Y APEL + +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 216 ADVYSFGVMLLEI 228
DV++ G ++ E+
Sbjct: 206 VDVWAIGCLVTEM 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGX 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH 88
+I S ++++G G G V+ N ++AVK + K F E ++ + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 69
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLH 147
LV L ++ ++ EFM GSL + L E + + + +I EG+ ++
Sbjct: 70 DKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPE 204
+ IH D++ NIL+ S KI+DFGL+++++ ++ YT G + +TAPE
Sbjct: 129 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPE 182
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ + T+K+DV+SFG++L+EIV + + + E++
Sbjct: 183 AINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G +G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAAGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGX 185
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEM---KIIGRIHHKNLVDLVG 96
+GRGG G V+ + GK A KKL K + ++ M KI+ ++H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
++ LV M G + ++ E + E R I +I+ GL +LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
II+ D+KP N+L+D+ +ISD GL+ LK QT+T GT G+ APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELL-LGEEYD 367
Query: 214 VKADVYSFGVMLLEIVCCR 232
D ++ GV L E++ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 9/210 (4%)
Query: 23 RSFSYEQIVLASENF--KEEIGRGGSGRVYKGCINGGKEIAVKKLIK--IVEEGESEFRN 78
R+ ++ VL E+ E+IGRG G V+ G + + K + + + +++F
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E +I+ + H N+V L+G C++ +V E ++ G L RL ++ +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR 198
G+ YL +C IH D+ N L+ E KISDFG+S+ LR
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 199 -GYTAPELHSRNNRITVKADVYSFGVMLLE 227
+TAPE + R + ++DV+SFG++L E
Sbjct: 279 VKWTAPEALN-YGRYSSESDVWSFGILLWE 307
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEM---KIIGRIHHKNLVDLVG 96
+GRGG G V+ + GK A KKL K + ++ M KI+ ++H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
++ LV M G + ++ E + E R I +I+ GL +LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
II+ D+KP N+L+D+ +ISD GL+ LK QT+T GT G+ APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELL-LGEEYD 367
Query: 214 VKADVYSFGVMLLEIVCCR 232
D ++ GV L E++ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEM---KIIGRIHHKNLVDLVG 96
+GRGG G V+ + GK A KKL K + ++ M KI+ ++H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
++ LV M G + ++ E + E R I +I+ GL +LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
II+ D+KP N+L+D+ +ISD GL+ LK QT+T GT G+ APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELL-LGEEYD 367
Query: 214 VKADVYSFGVMLLEIVCCR 232
D ++ GV L E++ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEM---KIIGRIHHKNLVDLVG 96
+GRGG G V+ + GK A KKL K + ++ M KI+ ++H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRA-EQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
++ LV M G + ++ E + E R I +I+ GL +LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRN 309
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
II+ D+KP N+L+D+ +ISD GL+ LK QT+T GT G+ APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELL-LGEEYD 367
Query: 214 VKADVYSFGVMLLEIVCCR 232
D ++ GV L E++ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+ IG+G G V G G K +AVK + + F E ++ ++ H NLV L+G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 99 SEGSNRL-LVYEFMRNGSLGNLL-FRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
E L +V E+M GSL + L R L + +L++ E + YL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 131
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+ N+L+ E AK+SDFGL+K + Q ++ +TAPE R + K+
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPE-ALREAAFSTKS 186
Query: 217 DVYSFGVMLLEI 228
DV+SFG++L EI
Sbjct: 187 DVWSFGILLWEI 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 179
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
E IG+G G V+KG N +++ K+I + E + + E+ ++ + + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL---EIMEGLHYLHDECETR 153
+GS ++ E++ GS +LL R + +IA EI++GL YLH E +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSE---K 140
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH DIK N+L+ E K++DFG++ L Q + T + GT + APE+ + +
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV-IQQSAYD 198
Query: 214 VKADVYSFGVMLLEIV 229
KAD++S G+ +E+
Sbjct: 199 SKADIWSLGITAIELA 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH 88
+I S ++++G G G V+ N ++AVK + K F E ++ + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLH 147
LV L ++ ++ EFM GSL + L E + + + +I EG+ ++
Sbjct: 243 DKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPE 204
+ IH D++ NIL+ S KI+DFGL+++++ ++ YT G + +TAPE
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPE 355
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ + T+K+DV+SFG++L+EIV + + + E++
Sbjct: 356 AINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 182
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 185
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKEIAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
+E IG G + V C +++A+K++ ++ + E E++ + + HH N+V
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 95 VGFCSEGSNRLLVYEFMRNGS----LGNLLFRAEQRLSWSERRRIAL---EIMEGLHYLH 147
LV + + GS + +++ + E + + IA E++EGL YLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTAP 203
+ IH D+K NIL+ E +I+DFG+S L T T +R GT + AP
Sbjct: 139 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIV 229
E+ + KAD++SFG+ +E+
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELA 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 46/293 (15%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA------------ 136
+N+V+L+G C+ G L++ E+ G L N L R + L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 137 -LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR 195
++ +G+ +L IH D+ N+L+ AKI DFGL++ + D Y V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYIVKG 224
Query: 196 GTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQ 252
R + APE + TV++DV+S+G++L EI L +L++
Sbjct: 225 NARLPVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILVN---- 273
Query: 253 CYEAGELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQVIWMME 303
+ LV D + F +N+ I C E RPT +Q+ ++
Sbjct: 274 ----SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 145/303 (47%), Gaps = 35/303 (11%)
Query: 16 VFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKG-CINGGK---EIAVKKLIKIVEE 71
+ E+K +E++V S+ IG+G G VY G I+ + + A+K L +I E
Sbjct: 7 LLAEVKDVLIPHERVVTHSDRV---IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM 63
Query: 72 GESE-FRNEMKIIGRIHHKNLVDLVG--FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLS 128
+ E F E ++ ++H N++ L+G EG +L+ +M +G L + ++ +
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPT 122
Query: 129 WSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT 188
+ L++ G+ YL E + +H D+ N ++DES+ K++DFGL++ + +
Sbjct: 123 VKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
Query: 189 RTYTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ R R +TA E + R T K+DV+SFGV+L E++
Sbjct: 180 YSVQQHRHARLPVKWTALE-SLQTYRFTTKSDVWSFGVLLWELLTRGAP----------- 227
Query: 246 LIDWAHQCYEAGELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQVIWMME 303
++ + +L + ++ + E+ ++L ++ C E + +RPT + ++ +E
Sbjct: 228 ----PYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283
Query: 304 GIV 306
IV
Sbjct: 284 QIV 286
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+IG+G SG VY + G+E+A++++ + + NE+ ++ + N+V+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
G +V E++ GSL +++ E + + + E ++ L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
DIK NIL+ K++DFG + +Q++ + + GT + APE+ +R K D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTR-KAYGPKVD 198
Query: 218 VYSFGVMLLEIV 229
++S G+M +E++
Sbjct: 199 IWSLGIMAIEMI 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 37 FKEEIGRGGSGRVYKG-CINGGKEIAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
+E IG G + V C +++A+K++ ++ + E E++ + + HH N+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 95 VGFCSEGSNRLLVYEFMRNGS----LGNLLFRAEQRLSWSERRRIAL---EIMEGLHYLH 147
LV + + GS + +++ + E + + IA E++EGL YLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTAP 203
+ IH D+K NIL+ E +I+DFG+S L T T +R GT + AP
Sbjct: 134 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIV 229
E+ + KAD++SFG+ +E+
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELA 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+IG+G SG VY + G+E+A++++ + + NE+ ++ + N+V+ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
G +V E++ GSL +++ E + + + E ++ L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 141
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
+IK NIL+ K++DFG + +Q++ T++ GT + APE+ +R K D
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTR-KAYGPKVD 199
Query: 218 VYSFGVMLLEIV 229
++S G+M +E++
Sbjct: 200 IWSLGIMAIEMI 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+IG+G SG VY + G+E+A++++ + + NE+ ++ + N+V+ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
G +V E++ GSL +++ E + + + E ++ L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 141
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
DIK NIL+ K++DFG + +Q++ + + GT + APE+ +R K D
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTR-KAYGPKVD 199
Query: 218 VYSFGVMLLEIV 229
++S G+M +E++
Sbjct: 200 IWSLGIMAIEMI 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 11 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 68 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 121
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 182 FHAEPVDVWSCGIVLTAMLA 201
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
+ IG+G G VYKG N KE+ K+I + E + + E+ ++ + + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ E++ GS +LL L + I EI++GL YLH E R IH
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE---RKIH 139
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
DIK N+L+ E K++DFG++ L TD GT + APE+ + + KA
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEV-IKQSAYDFKA 197
Query: 217 DVYSFGVMLLEIV 229
D++S G+ +E+
Sbjct: 198 DIWSLGITAIELA 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 29/246 (11%)
Query: 12 SSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLI---KI 68
S P VF+E + +F + +I+ A IG+G G+V N K++ K + K
Sbjct: 1 SMPPVFDENEDVNFDHFEILRA-------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC 53
Query: 69 VEEGESEFRN---EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
VE +E RN E++I+ + H LV+L + + +V + + G +L + +Q
Sbjct: 54 VER--NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG---DLRYHLQQ 108
Query: 126 RLSWSER--RRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
+ + E + E++ L YL ++ RIIH D+KP NIL+DE I+DF ++ +L
Sbjct: 109 NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
Query: 184 KTDQTRTYTVLRGTRGYTAPELHS--RNNRITVKADVYSFGVMLLEIVCCRK--NVDESL 239
+ T + GT+ Y APE+ S + + D +S GV E++ R+ ++ S
Sbjct: 166 PRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST 223
Query: 240 RDDEIV 245
EIV
Sbjct: 224 SSKEIV 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIV-------EEGESEFRNEMKIIGRIHHKNL 91
+++G GG VY + + +K IK + EE F E+ ++ H+N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
V ++ E LV E++ +L + + LS +I++G+ + HD
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLL-KTDQTRTYTVLRGTRGYTAPELHSRNN 210
RI+H DIKP NIL+D + KI DFG++K L +T T+T VL GT Y +PE ++
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-GTVQYFSPE-QAKGE 187
Query: 211 RITVKADVYSFGVMLLEIVC 230
D+YS G++L E++
Sbjct: 188 ATDECTDIYSIGIVLYEMLV 207
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+IG+G SG VY + G+E+A++++ + + NE+ ++ + N+V+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
G +V E++ GSL +++ E + + + E ++ L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
DIK NIL+ K++DFG + +Q++ ++ GT + APE+ +R K D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTR-KAYGPKVD 198
Query: 218 VYSFGVMLLEIV 229
++S G+M +E++
Sbjct: 199 IWSLGIMAIEMI 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 13 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 70 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVE-----EGESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V + +N E AV +KIV+ + + E+ I ++H+N+V
Sbjct: 12 QTLGEGAYGEV-QLAVNRVTEEAVA--VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDECE 151
G EG+ + Y F+ S G L R E + E +R ++M G+ YLH
Sbjct: 69 FYGHRREGN---IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG--- 122
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+DE KISDFGL+ + + ++ R + GT Y APEL R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 211 RITVKADVYSFGVMLLEIVC 230
DV+S G++L ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 23/234 (9%)
Query: 10 QVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKI 68
+++S EE K R ++ E + +G+G G VY K I A+K L K
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIG-----RPLGKGKFGNVYLAREKQSKFILALKVLFKA 70
Query: 69 VEEG---ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
E E + R E++I + H N++ L G+ + + L+ E+ G++ +R Q
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQ 126
Query: 126 RLSWSERRRIALEIME---GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+LS + +R A I E L Y H + R+IH DIKP N+L+ + + KI+DFG S
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-- 181
Query: 183 LKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
+ +R T L GT Y PE+ K D++S GV+ E + + +
Sbjct: 182 VHAPSSRR-TTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + + T L GT Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYLPP 176
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 177 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH----------- 88
+G+G G+V K + A+KK I+ EE S +E+ ++ ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 89 --KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYL 146
+N V + + S + E+ NG+L +L+ E R+ +I+E L Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-------LLKTD------QTRTYTV 193
H + IIH D+KP NI +DES KI DFGL+K +LK D + T
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 194 LRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
GT Y A E+ K D+YS G++ E++
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 10 QVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKI 68
+++S EE K R ++ E + +G+G G VY K I A+K L K
Sbjct: 7 ELASKQKNEESKKRQWALEDFEIG-----RPLGKGKFGNVYLAREKQSKFILALKVLFKA 61
Query: 69 VEEG---ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
E E + R E++I + H N++ L G+ + + L+ E+ G++ +R Q
Sbjct: 62 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQ 117
Query: 126 RLSWSERRRIALEIME---GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+LS + +R A I E L Y H + R+IH DIKP N+L+ + + KI+DFG S
Sbjct: 118 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-- 172
Query: 183 LKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +R T L GT Y PE+ K D++S GV+ E + +
Sbjct: 173 VHAPSSRR-TTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 31 VLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFR----NEMKIIGR 85
LA+ +++IGRG VY+ C+ G +A+KK ++I + +++ R E+ ++ +
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKK-VQIFDLMDAKARADCIKEIDLLKQ 88
Query: 86 IHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL--FRAEQRLSWSERR--RIALEIME 141
++H N++ E + +V E G L ++ F+ ++RL ER + +++
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCS 147
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYT 201
L ++H R++H DIKP N+ + + K+ D GL + + T ++++ GT Y
Sbjct: 148 ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYM 203
Query: 202 APE-LHSRNNRITVKADVYSFGVMLLEIV 229
+PE +H N K+D++S G +L E+
Sbjct: 204 SPERIH--ENGYNFKSDIWSLGCLLYEMA 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 120
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 174
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 175 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHHKNLVDL 94
FKE +G G V GK AVK + K +G ES NE+ ++ +I H+N+V L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECET 152
E N L Y M+ S G L R ++ ++E+ L ++++ ++YLH
Sbjct: 86 EDIY-ESPNHL--YLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RM 139
Query: 153 RIIHCDIKPHNIL---MDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I+H D+KP N+L DE K ISDFGLSK+ + + GT GY APE+ ++
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 210 NRITVKADVYSFGVMLLEIVC 230
+ D +S GV+ ++C
Sbjct: 198 P-YSKAVDCWSIGVIAYILLC 217
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 180
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 179
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE-----GESEFRNEMKIIGRIHHKNLVDL 94
+G G G VYKG + G+ + + IKI+ E EF +E I+ + H +LV L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+G C + +L V + M +G L + + + ++I +G+ YL E R+
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRL 138
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPE-LHSRNNR 211
+H D+ N+L+ KI+DFGL++LL+ D+ + Y G + A E +H R +
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDE-KEYNADGGKMPIKWMALECIHYR--K 195
Query: 212 ITVKADVYSFGVMLLEIV 229
T ++DV+S+GV + E++
Sbjct: 196 FTHQSDVWSYGVTIWELM 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
E+IG+G G V+KG N +++ K+I + E + + E+ ++ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ E++ GS +LL L ++ I EI++GL YLH E + IH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
DIK N+L+ E + K++DFG++ L Q + T + GT + APE+ + + KA
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV-IKQSAYDSKA 185
Query: 217 DVYSFGVMLLEIV 229
D++S G+ +E+
Sbjct: 186 DIWSLGITAIELA 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 179
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 35 ENFKEEIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVD 93
+NF + IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V+
Sbjct: 32 DNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
+ G +V EF+ G+L +++ R++ + + L +++ L LH +
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG--- 145
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
+IH DIK +IL+ + K+SDFG + + R L GT + APEL SR
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLP-YG 203
Query: 214 VKADVYSFGVMLLEIV 229
+ D++S G+M++E+V
Sbjct: 204 PEVDIWSLGIMVIEMV 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 123 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 178
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 180
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 35 ENFKEEIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVD 93
+NF + IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V+
Sbjct: 34 DNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
+ G +V EF+ G+L +++ R++ + + L +++ L LH +
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG--- 147
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
+IH DIK +IL+ + K+SDFG + + R L GT + APEL SR
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLP-YG 205
Query: 214 VKADVYSFGVMLLEIV 229
+ D++S G+M++E+V
Sbjct: 206 PEVDIWSLGIMVIEMV 221
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
E+IG+G G V+KG N +++ K+I + E + + E+ ++ + + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ E++ GS +LL L ++ I EI++GL YLH E + IH
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE---KKIH 147
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
DIK N+L+ E + K++DFG++ L Q + T + GT + APE+ + + KA
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV-IKQSAYDSKA 205
Query: 217 DVYSFGVMLLEIV 229
D++S G+ +E+
Sbjct: 206 DIWSLGITAIELA 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 35 ENFKEEIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVD 93
+NF + IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V+
Sbjct: 23 DNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
+ G +V EF+ G+L +++ R++ + + L +++ L LH +
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG--- 136
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
+IH DIK +IL+ + K+SDFG + + R L GT + APEL SR
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLP-YG 194
Query: 214 VKADVYSFGVMLLEIV 229
+ D++S G+M++E+V
Sbjct: 195 PEVDIWSLGIMVIEMV 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 180
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 181 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNL 91
FK ++G G G V+ + + ++++IK + + S+ E++++ + H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR---LSWSERRRIALEIMEGLHYLHD 148
+ + + N +V E G L + A+ R LS + ++M L Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 149 ECETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL 205
+ ++H D+KP NIL ++ KI DFGL++L K+D+ T GT Y APE+
Sbjct: 143 Q---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTALYMAPEV 197
Query: 206 HSRNNRITVKADVYSFGVML 225
R+ +T K D++S GV++
Sbjct: 198 FKRD--VTFKCDIWSAGVVM 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEE-GESEFRNEMKIIGRIHHKNLVDLVGF 97
EE+G G G V++ + V K I + +NE+ I+ ++HH L++L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
+ +L+ EF+ G L + + + ++S +E + EGL ++H E I+H
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHL 173
Query: 158 DIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
DIKP NI M E+ KA KI DFGL+ L D+ T T + APE+ R +
Sbjct: 174 DIKPENI-MCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREP-VGF 229
Query: 215 KADVYSFGVM 224
D+++ GV+
Sbjct: 230 YTDMWAIGVL 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 125 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 180
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 31 VLASENFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHK 89
VL + EE+G G G V++ G A K ++ E + R E++ + + H
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 108
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
LV+L + + +++YEFM G L + ++S E ++ +GL ++H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-- 166
Query: 150 CETRIIHCDIKPHNILM--DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
E +H D+KP NI+ S + K+ DFGL+ L D ++ V GT + APE+ +
Sbjct: 167 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPEV-A 222
Query: 208 RNNRITVKADVYSFGVMLLEIVC-----CRKNVDESLRDDEIVLIDW 249
+ D++S GV+ ++ +N DE+LR+ + DW
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN--VKSCDW 267
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 35 ENFKEEIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVD 93
+NF + IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V+
Sbjct: 27 DNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
+ G +V EF+ G+L +++ R++ + + L +++ L LH +
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG--- 140
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
+IH DIK +IL+ + K+SDFG + + R L GT + APEL SR
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLP-YG 198
Query: 214 VKADVYSFGVMLLEIV 229
+ D++S G+M++E+V
Sbjct: 199 PEVDIWSLGIMVIEMV 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 182
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 179
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE--GESEFR---NEMKIIGRIHHKNLVDL 94
+G G G V+KG I G+ I + IK++E+ G F+ + M IG + H ++V L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+G C GS+ LV +++ GSL + + + L ++I +G++YL E +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGM 136
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR-TYTVLRGTRGYTAPE-LHSRNNRI 212
+H ++ N+L+ + +++DFG++ LL D + Y+ + + A E +H +
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF--GKY 194
Query: 213 TVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQEDVNIE 272
T ++DV+S+GV + E++ LR E+ E GE ++ + I+
Sbjct: 195 THQSDVWSYGVTVWELMTFGAEPYAGLRLAEV------PDLLEKGE---RLAQPQICTID 245
Query: 273 EFENLVKIGLWCVECELNLRPTMKQV 298
+ +VK C + N+RPT K++
Sbjct: 246 VYMVMVK----CWMIDENIRPTFKEL 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TXLCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 125
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 179
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 180 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 22/214 (10%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 180
Query: 204 E-LHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E + R + K D++S GV+ E + + +
Sbjct: 181 EXIEGRXH--DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 31 VLASENFKEEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHK 89
VL + EE+G G G V++ G A K ++ E + R E++ + + H
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
LV+L + + +++YEFM G L + ++S E ++ +GL ++H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-- 272
Query: 150 CETRIIHCDIKPHNILM--DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
E +H D+KP NI+ S + K+ DFGL+ L D ++ V GT + APE+ +
Sbjct: 273 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPEV-A 328
Query: 208 RNNRITVKADVYSFGVMLLEIVC-----CRKNVDESLRDDEIVLIDW 249
+ D++S GV+ ++ +N DE+LR+ + DW
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN--VKSCDW 373
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 38 KEEIGRGGSGRVYKGCIN--GGKEIAVKKL--------IKIVEEGESEFRNEMKIIGRIH 87
K+ IGRG S V + C++ G E AVK + + +EE R E I+ ++
Sbjct: 99 KDVIGRGVSS-VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 88 -HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYL 146
H +++ L+ S LV++ MR G L + L + LS E R I ++E + +L
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-- 204
H I+H D+KP NIL+D++ + ++SDFG S L+ + L GT GY APE
Sbjct: 217 H---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEIL 271
Query: 205 ---LHSRNNRITVKADVYSFGVMLLEIVC 230
+ + + D+++ GV+L ++
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 118
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 172
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 173 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 180
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE--GESEFR---NEMKIIGRIHHKNLVDL 94
+G G G V+KG I G+ I + IK++E+ G F+ + M IG + H ++V L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+G C GS+ LV +++ GSL + + + L ++I +G++YL E +
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGM 154
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR-TYTVLRGTRGYTAPE-LHSRNNRI 212
+H ++ N+L+ + +++DFG++ LL D + Y+ + + A E +H +
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF--GKY 212
Query: 213 TVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQEDVNIE 272
T ++DV+S+GV + E++ LR E+ E GE ++ + I+
Sbjct: 213 THQSDVWSYGVTVWELMTFGAEPYAGLRLAEV------PDLLEKGE---RLAQPQICTID 263
Query: 273 EFENLVKIGLWCVECELNLRPTMKQV 298
+ +VK C + N+RPT K++
Sbjct: 264 VYMVMVK----CWMIDENIRPTFKEL 285
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 26 SYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMK 81
S Q L + +G+G G VY K I A+K L K E E + R E++
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME 141
I + H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITE 120
Query: 142 ---GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR 198
L Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT
Sbjct: 121 LANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRR-TTLCGTL 174
Query: 199 GYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
Y PE+ K D++S GV+ E +
Sbjct: 175 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 60
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 118
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNV 235
+ +V++D++S G+ L+E+ R +
Sbjct: 174 -RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE-----GESEFRNEMKIIGRIHHKNLVDL 94
+G G G VYKG + G+ + + IKI+ E EF +E I+ + H +LV L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+G C + +L V + M +G L + + + ++I +G+ YL E R+
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRL 161
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPE-LHSRNNR 211
+H D+ N+L+ KI+DFGL++LL+ D+ + Y G + A E +H R +
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDE-KEYNADGGKMPIKWMALECIHYR--K 218
Query: 212 ITVKADVYSFGVMLLEIV 229
T ++DV+S+GV + E++
Sbjct: 219 FTHQSDVWSYGVTIWELM 236
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 40 EIGRGGSGRVYKGCI----NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
+IG G +G V C+ + G+++AVK + ++ NE+ I+ H N+V++
Sbjct: 52 KIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G ++ EF++ G+L +++ ++ RL+ + + +++ L YLH + +I
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H DIK +IL+ + K+SDFG + D + L GT + APE+ SR+ T +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-KXLVGTPYWMAPEVISRSLYAT-E 221
Query: 216 ADVYSFGVMLLEIV 229
D++S G+M++E+V
Sbjct: 222 VDIWSLGIMVIEMV 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 60
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 118
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNV 235
+ +V++D++S G+ L+E+ R +
Sbjct: 174 -RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G+G G VY G ++ IA+K++ + E+ + + HKN+V +G S
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR-------IALEIMEGLHYLHDECET 152
E + E + GSL LL R W + +I+EGL YLHD
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIGFYTKQILEGLKYLHD---N 141
Query: 153 RIIHCDIKPHNILMDE-SWKAKISDFGLSKLLK--TDQTRTYTVLRGTRGYTAPELHSRN 209
+I+H DIK N+L++ S KISDFG SK L T T+T GT Y APE+ +
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKG 198
Query: 210 NRITVK-ADVYSFGVMLLEIVCCR 232
R K AD++S G ++E+ +
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 60
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 118
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +V++D++S G+ L+E+ R
Sbjct: 174 -RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 122
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 180
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 181 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 235
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +V++D++S G+ L+E+ R
Sbjct: 236 -RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TELCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 40 EIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
G +V EF+ G+L +++ R++ + + L +++ L LH + +IH D
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 195
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADV 218
IK +IL+ + K+SDFG + + R ++ GT + APEL SR + D+
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP-YGPEVDI 253
Query: 219 YSFGVMLLEIV 229
+S G+M++E+V
Sbjct: 254 WSLGIMVIEMV 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 60
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 118
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNV 235
+ +V++D++S G+ L+E+ R +
Sbjct: 174 -RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 60
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 118
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCRKNV 235
+ +V++D++S G+ L+E+ R +
Sbjct: 174 -RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 40 EIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
+IG G +G V + + GK +AVKK+ ++ NE+ I+ H+N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
G +V EF+ G+L +++ R++ + + L +++ L LH + +IH D
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 272
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADV 218
IK +IL+ + K+SDFG + + R ++ GT + APEL SR + D+
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP-YGPEVDI 330
Query: 219 YSFGVMLLEIV 229
+S G+M++E+V
Sbjct: 331 WSLGIMVIEMV 341
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G + ++ Q+LS + +R A I E L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPP 180
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 181 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 87
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 145
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 146 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 200
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +V++D++S G+ L+E+ R
Sbjct: 201 -RLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + + T L GT Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPP 176
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCR 232
E+ K D++S GV+ E + +
Sbjct: 177 EM-IEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G+G G VY G ++ IA+K++ + E+ + + HKN+V +G S
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR-------IALEIMEGLHYLHDECET 152
E + E + GSL LL R W + +I+EGL YLHD
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIGFYTKQILEGLKYLHD---N 127
Query: 153 RIIHCDIKPHNILMDE-SWKAKISDFGLSKLLK--TDQTRTYTVLRGTRGYTAPELHSRN 209
+I+H DIK N+L++ S KISDFG SK L T T+T GT Y APE+ +
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKG 184
Query: 210 NRITVK-ADVYSFGVMLLEIVCCR 232
R K AD++S G ++E+ +
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPP 180
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCR 232
E+ K D++S GV+ E + +
Sbjct: 181 EM-IEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+E + + A + + ++++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTYT T Y APE+
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGC 177
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R T L GT Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPP 176
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCR 232
E+ K D++S GV+ E + +
Sbjct: 177 EM-IEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+EF+ + A + + ++++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 179
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G+V G+++A+K + K V + + E+ + + H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
++V E+ N ++ R ++S E RR +I+ + Y H +I+H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH---RHKIVH 126
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L+DE KI+DFGLS ++ TD T G+ Y APE+ S +
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 184
Query: 217 DVYSFGVMLLEIVCCRKNVDE 237
DV+S GV+L ++C R D+
Sbjct: 185 DVWSCGVILYVMLCRRLPFDD 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G+V G+++A+K + K V + + E+ + + H +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
++V E+ N ++ R ++S E RR +I+ + Y H +I+H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH---RHKIVH 130
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L+DE KI+DFGLS ++ TD T G+ Y APE+ S +
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 188
Query: 217 DVYSFGVMLLEIVCCRKNVDE 237
DV+S GV+L ++C R D+
Sbjct: 189 DVWSCGVILYVMLCRRLPFDD 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 40 EIGRGGSGRVYKGCINGG--KEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E+GRG + VY+ C G K A+K L K V++ R E+ ++ R+ H N++ L
Sbjct: 60 ELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIMEGLHYLHDECETRII 155
+ LV E + G L + R ++ +SER +I+E + YLH E I+
Sbjct: 117 FETPTEISLVLELVTGGELFD---RIVEKGYYSERDAADAVKQILEAVAYLH---ENGIV 170
Query: 156 HCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRI 212
H D+KP N+L KI+DFGLSK+++ Q TV GT GY APE+ R
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVC-GTPGYCAPEIL-RGCAY 227
Query: 213 TVKADVYSFGVMLLEIVC 230
+ D++S G++ ++C
Sbjct: 228 GPEVDMWSVGIITYILLC 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRI-HHKNLVDLVG- 96
E +G G G+VYKG ++A K++ + + E E + E+ ++ + HH+N+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 97 FCSEGSNRL-----LVYEFMRNGSLGNLLFRAEQRLSWSER-RRIALEIMEGLHYLHDEC 150
F + + LV EF GS+ +L+ + E I EI+ GL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--- 146
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL----H 206
+ ++IH DIK N+L+ E+ + K+ DFG+S L R T + GT + APE+
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDE 205
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
+ + K+D++S G+ +E+
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMA 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 26 SYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMK 81
S Q L + +G+G G VY K I A+K L K E E + R E++
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME 141
I + H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITE 120
Query: 142 ---GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR 198
L Y H + R+IH DIKP N+L+ + + KI+DFG S + + T L GT
Sbjct: 121 LANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTL 174
Query: 199 GYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
Y PE+ K D++S GV+ E +
Sbjct: 175 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G+V G+++A+K + K V + + E+ + + H +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
++V E+ N ++ R ++S E RR +I+ + Y H +I+H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH---RHKIVH 136
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L+DE KI+DFGLS ++ TD T G+ Y APE+ S +
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 194
Query: 217 DVYSFGVMLLEIVCCRKNVDE 237
DV+S GV+L ++C R D+
Sbjct: 195 DVWSCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNLVDL 94
+ +G G G+V G+++A+K + K V + + E+ + + H +++ L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
++V E+ N ++ R ++S E RR +I+ + Y H +I
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH---RHKI 133
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
+H D+KP N+L+DE KI+DFGLS ++ TD T G+ Y APE+ S
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKLYAGP 191
Query: 215 KADVYSFGVMLLEIVCCRKNVDE 237
+ DV+S GV+L ++C R D+
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 37 FKEEIGRGGSGRVY--KGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
F E +G G V+ K + G K A+K + K +S NE+ ++ +I H+N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTG-KLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR--IALEIMEGLHYLHDECET 152
++ LV + + G L + R +R ++E+ + +++ + YLH E
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFD---RILERGVYTEKDASLVIQQVLSAVKYLH---EN 125
Query: 153 RIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I+H D+KP N+L +E+ K I+DFGLSK+ +Q + GT GY APE+ ++
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQ- 181
Query: 210 NRITVKADVYSFGVMLLEIVC 230
+ D +S GV+ ++C
Sbjct: 182 KPYSKAVDCWSIGVITYILLC 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
E+IG+G G V+KG N +++ K+I + E + + E+ ++ + + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ E++ GS +LL L ++ I EI++GL YLH E + IH
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE---KKIH 142
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
DIK N+L+ E + K++DFG++ L TD GT + APE+ + + KA
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEV-IKQSAYDSKA 200
Query: 217 DVYSFGVMLLEIV 229
D++S G+ +E+
Sbjct: 201 DIWSLGITAIELA 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 79
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 80 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 137
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L ++ GTR Y +PE
Sbjct: 138 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 192
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +V++D++S G+ L+E+ R
Sbjct: 193 -RLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEF--RNEMKIIGRIHHKNLVDLVG 96
E+IG+G G V+KG N +++ K+I + E + + E+ ++ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ E++ GS +LL L ++ I EI++GL YLH E + IH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
DIK N+L+ E + K++DFG++ L TD GT + APE+ + + KA
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEV-IKQSAYDSKA 185
Query: 217 DVYSFGVMLLEIV 229
D++S G+ +E+
Sbjct: 186 DIWSLGITAIELA 198
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + ++IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDD 242
E+ K D++S GV+ E + + + + D
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI++FG S + +R T L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRR-TTLCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 55/297 (18%)
Query: 37 FKEEIGRGGSGRVYKGCING-GKE-----IAVKKLIKIVEEGESE-FRNEMKIIGRI-HH 88
F + +G G G+V + G GKE +AVK L E E +E+KI+ + H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFR-AEQRLSWS-------------ERRR 134
+N+V+L+G C+ G L++ E+ G L N L R AE L S + R
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 135 IAL--------EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTD 186
+ L ++ +G+ +L IH D+ N+L+ AKI DFGL++ + D
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 187 QTRTYTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
Y V R + APE + TV++DV+S+G++L EI N
Sbjct: 212 S--NYIVKGNARLPVKWMAPE-SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----- 263
Query: 244 IVLIDWAHQCYEAGELQNLVSDQEDVNIEEF--ENLVKIGLWCVECELNLRPTMKQV 298
+L++ + LV D + F +N+ I C E RPT +Q+
Sbjct: 264 -ILVN--------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 32 LASENFKE--EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGR 85
L ++F++ E+G G G V+K + +KLI + E + RN E++++
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLHE 63
Query: 86 IHHKNLVDLVG-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
+ +V G F S+G + + E M GSL +L +A R+ ++++ +++GL
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLT 121
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
YL ++ +I+H D+KP NIL++ + K+ DFG+S L + + GTR Y +PE
Sbjct: 122 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPE 176
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ +V++D++S G+ L+E+ R
Sbjct: 177 -RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 123
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI++FG S + +R T L GT Y P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRR-TTLCGTLDYLPP 177
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 178 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 41 IGRGGSGRVYKGC--INGGKEIAVKKLIKI---VEEGESEFRNEMKIIGRIHHKN--LVD 93
IGRGG G VY GC + GK A+K L K +++GE+ NE ++ + + +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
+ + ++L + NG G+L + Q +SE R A EI+ GL ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF- 312
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+++ D+KP NIL+DE +ISD GL+ + GT GY APE+ +
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVA 367
Query: 212 ITVKADVYSFGVMLLEIV 229
AD +S G ML +++
Sbjct: 368 YDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 41 IGRGGSGRVYKGC--INGGKEIAVKKLIKI---VEEGESEFRNEMKIIGRIHHKN--LVD 93
IGRGG G VY GC + GK A+K L K +++GE+ NE ++ + + +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
+ + ++L + NG G+L + Q +SE R A EI+ GL ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF- 312
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+++ D+KP NIL+DE +ISD GL+ + GT GY APE+ +
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVA 367
Query: 212 ITVKADVYSFGVMLLEIV 229
AD +S G ML +++
Sbjct: 368 YDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 41 IGRGGSGRVYKGC--INGGKEIAVKKLIKI---VEEGESEFRNEMKIIGRIHHKN--LVD 93
IGRGG G VY GC + GK A+K L K +++GE+ NE ++ + + +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
+ + ++L + NG G+L + Q +SE R A EI+ GL ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF- 312
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+++ D+KP NIL+DE +ISD GL+ + GT GY APE+ +
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVA 367
Query: 212 ITVKADVYSFGVMLLEIV 229
AD +S G ML +++
Sbjct: 368 YDSSADWFSLGCMLFKLL 385
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 43/260 (16%)
Query: 7 ISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCI------NGGKEI 60
+S V + + E+ K F + +VL + +G G G+V K G +
Sbjct: 3 LSLSVDAFKILEDPKW-EFPRKNLVLG-----KTLGEGEFGKVVKATAFHLKGRAGYTTV 56
Query: 61 AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNL 119
AVK L + E + +E ++ +++H +++ L G CS+ LL+ E+ + GSL
Sbjct: 57 AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 120 LFRA-----------------------EQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
L + E+ L+ + A +I +G+ YL E +++H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVH 173
Query: 157 CDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSRNNRI-TV 214
D+ NIL+ E K KISDFGLS+ + + D + R + A + S + I T
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA--IESLFDHIYTT 231
Query: 215 KADVYSFGVMLLEIVCCRKN 234
++DV+SFGV+L EIV N
Sbjct: 232 QSDVWSFGVLLWEIVTLGGN 251
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 41 IGRGGSGRVYKGC--INGGKEIAVKKLIKI---VEEGESEFRNEMKIIGRIHHKN--LVD 93
IGRGG G VY GC + GK A+K L K +++GE+ NE ++ + + +
Sbjct: 196 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
+ + ++L + NG G+L + Q +SE R A EI+ GL ++H+
Sbjct: 255 CMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF- 311
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+++ D+KP NIL+DE +ISD GL+ + GT GY APE+ +
Sbjct: 312 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVA 366
Query: 212 ITVKADVYSFGVMLLEIV 229
AD +S G ML +++
Sbjct: 367 YDSSADWFSLGCMLFKLL 384
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 138
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R VL GT Y APE+ S+ + +
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGH-SFEV 196
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETS 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 47/262 (17%)
Query: 7 ISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCI------NGGKEI 60
+S V + + E+ K F + +VL + +G G G+V K G +
Sbjct: 3 LSLSVDAFKILEDPKW-EFPRKNLVLG-----KTLGEGEFGKVVKATAFHLKGRAGYTTV 56
Query: 61 AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNL 119
AVK L + E + +E ++ +++H +++ L G CS+ LL+ E+ + GSL
Sbjct: 57 AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 120 LFRA-----------------------EQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
L + E+ L+ + A +I +G+ YL E +++H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVH 173
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE---LHSRNNRI- 212
D+ NIL+ E K KISDFGLS+ D + ++ ++G + + S + I
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSR----DVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 213 TVKADVYSFGVMLLEIVCCRKN 234
T ++DV+SFGV+L EIV N
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGN 251
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-XXLCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G + ++ Q+LS + +R A I E L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-XXLXGTLDYLPP 180
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCR 232
E+ K D++S GV+ E + +
Sbjct: 181 EM-IEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 162
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R VL GT Y APE+ S+ + +
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGH-SFEV 220
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETS 242
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-XXLCGTLDYLPP 175
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 176 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 123
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + +R L GT Y P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-XXLCGTLDYLPP 177
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 178 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 140
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R T L GT Y APE+ S+ + +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH-SFEV 198
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETS 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R VL GT Y APE+ S+ + +
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGH-SFEV 222
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETS 244
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 37 FKEEIGRGGSGRVYKGCING------GKEIAVKKLIK-IVEEGESEFRNEMKIIGRIHHK 89
+ +IG G GRV++ G +AVK L + + +++F+ E ++ +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL-----------------FRA------EQR 126
N+V L+G C+ G L++E+M G L L RA
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 127 LSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTD 186
LS +E+ IA ++ G+ YL E + +H D+ N L+ E+ KI+DFGLS+ + +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 187 QTRTYTVLRGTRGYT---APELHSRNNRITVKADVYSFGVMLLEI 228
Y G P NR T ++DV+++GV+L EI
Sbjct: 228 D---YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKIIGRIHHKNLVDL 94
+G G G VYKG I G+ + + IK++ E S E +E ++ + + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+G C + +L V + M G L + + RL + ++I +G+ YL D R+
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRL 140
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS-RNNRIT 213
+H D+ N+L+ KI+DFGL++LL D+T Y G L S R T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE-YHADGGKVPIKWMALESILRRRFT 199
Query: 214 VKADVYSFGVMLLEIV 229
++DV+S+GV + E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH----------- 88
+G+G G+V K + A+KK I+ EE S +E+ ++ ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 89 --KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYL 146
+N V + + S + E+ N +L +L+ E R+ +I+E L Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-------LLKTD------QTRTYTV 193
H + IIH D+KP NI +DES KI DFGL+K +LK D + T
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 194 LRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
GT Y A E+ K D+YS G++ E++
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 140
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R T L GT Y APE+ S+ + +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH-SFEV 198
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETS 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 41 IGRGGSGRVY----KGCINGGKEIAVKKLIKIVEEGESEFRNEMK--IIGRIHHKNLVDL 94
+G+G G+V+ + G A+K L K + R +M+ I+ ++H +V L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 95 -VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
F +EG L+ +F+R G +L R + + ++E + E+ GL +LH
Sbjct: 96 HYAFQTEG-KLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
II+ D+KP NIL+DE K++DFGLSK + + Y+ GT Y APE+ +R
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEVVNRQGH 207
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ AD +S+GV++ E++ R + + LI
Sbjct: 208 -SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH----HKNLVDLVG 96
+G+GG + ++ KE+ K++ + R +M + IH H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + L+ E R +I+ G YLH R+IH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIH 144
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ ++E + KI DFGL+ ++ D R T L GT Y APE+ S+ + +
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH-SFEV 202
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
DV+S G ++ ++ + + S
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETS 224
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 23/230 (10%)
Query: 10 QVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI-AVKKLIKI 68
+++S EE K R ++ E + +G+G G VY K I A+K L K
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIG-----RPLGKGKFGNVYLAREKQSKFILALKVLFKA 70
Query: 69 VEEG---ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQ 125
E E + R E++I + H N++ L G+ + + L+ E+ G++ +R Q
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQ 126
Query: 126 RLSWSERRRIALEIME---GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKL 182
+LS + +R A I E L Y H + R+IH DIKP N+L+ + + KI+DFG S
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVH 183
Query: 183 LKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
+ + L GT Y PE+ K D++S GV+ E + +
Sbjct: 184 APSSRRDD---LCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN----EMKIIGRIHHKNLVDLV 95
E+G G G V K I +KLI + E + RN E++++ + +V
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHL--EIKPAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 96 G-FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
G F S+G + + E M GSL +L A +R+ ++++ ++ GL YL ++ +I
Sbjct: 81 GAFYSDGEISICM-EHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK--HQI 136
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
+H D+KP NIL++ + K+ DFG+S L ++ GTR Y APE + +V
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPE-RLQGTHYSV 192
Query: 215 KADVYSFGVMLLEIVCCR 232
++D++S G+ L+E+ R
Sbjct: 193 QSDIWSMGLSLVELAVGR 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG G V + GK A KKL K + GE+ NE +I+ +++ + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA- 250
Query: 97 FCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
+ E + L LV M G L ++ Q + E R + A EI GL LH E R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---R 306
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
I++ D+KP NIL+D+ +ISD GL+ + QT V GT GY APE+ +N R T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEV-VKNERYT 363
Query: 214 VKADVYSFGVMLLEIV 229
D ++ G +L E++
Sbjct: 364 FSPDWWALGCLLYEMI 379
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 33 ASENFK--EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEG-ESEFRNEMKIIGRIHH 88
+S FK E++G G VYKG G +A+K++ EEG S E+ ++ + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNG--------SLGNLLFRAEQRLSWSERRRIALEIM 140
+N+V L + LV+EFM N ++GN + L + + +++
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGN----TPRGLELNLVKYFQWQLL 118
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGY 200
+GL + H E +I+H D+KP N+L+++ + K+ DFGL++ T++ T Y
Sbjct: 119 QGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWY 174
Query: 201 TAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
AP++ + + D++S G +L E++ + + ++++ LI
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II +++H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 230 EAF-MEGIFTSKTDTWSFGVLLWEI 253
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 33 ASENFK--EEIGRGGSGRVYKGCINGGKEI-AVKKLIKIVEEG---ESEFRNEMKIIGRI 86
A E+F+ +G+G G VY K I A+K L K E E + R E++I +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME---GL 143
H N++ L G+ + + L+ E+ G++ +R Q+LS + +R A I E L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
Y H + R+IH DIKP N+L+ + + KI+DFG S + + L GT Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD---LCGTLDYLPP 178
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
E+ K D++S GV+ E + + +
Sbjct: 179 EM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 41 IGRGGSGRVYK-GCINGGKEIAVKKLIK--IVEEGESEFRNEMKI-IGRIHHKNLVDLVG 96
+G G GRV+ + G+ A+K L K +V + E N+ ++ + + H ++ + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ ++ +++ G L +LL R QR + A E+ L YLH + II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLL-RKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIY 129
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP NIL+D++ KI+DFG +K + TY L GT Y APE+ S
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVP---DVTYX-LCGTPDYIAPEVVS-TKPYNKSI 184
Query: 217 DVYSFGVMLLEIVC 230
D +SFG+++ E++
Sbjct: 185 DWWSFGILIYEMLA 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 7 ISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCI------NGGKEI 60
+S V + + E+ K F + +VL + +G G G+V K G +
Sbjct: 3 LSLSVDAFKILEDPKW-EFPRKNLVLG-----KTLGEGEFGKVVKATAFHLKGRAGYTTV 56
Query: 61 AVKKLIKIVEEGE-SEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNL 119
AVK L + E + +E ++ +++H +++ L G CS+ LL+ E+ + GSL
Sbjct: 57 AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 120 LFRA-----------------------EQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
L + E+ L+ + A +I +G+ YL E ++H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVH 173
Query: 157 CDIKPHNILMDESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSRNNRI-TV 214
D+ NIL+ E K KISDFGLS+ + + D + R + A + S + I T
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA--IESLFDHIYTT 231
Query: 215 KADVYSFGVMLLEIVCCRKN 234
++DV+SFGV+L EIV N
Sbjct: 232 QSDVWSFGVLLWEIVTLGGN 251
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II +++H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 216 EAF-MEGIFTSKTDTWSFGVLLWEI 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 41 IGRGGSGRVYKGCING-GKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG G V + GK A KKL K + GE+ NE +I+ +++ + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA- 250
Query: 97 FCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIMEGLHYLHDECETR 153
+ E + L LV M G L ++ Q + E R + A EI GL LH E R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---R 306
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
I++ D+KP NIL+D+ +ISD GL+ + QT V GT GY APE+ +N R T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEV-VKNERYT 363
Query: 214 VKADVYSFGVMLLEIV 229
D ++ G +L E++
Sbjct: 364 FSPDWWALGCLLYEMI 379
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 215 EAF-MEGIFTSKTDTWSFGVLLWEI 238
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGK---EIAVKKLIKIVEEGES-EFRNEMKIIGRI-HHKNL 91
F++ IG G G+V K I + A+K++ + + + +F E++++ ++ HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE---------------QRLSWSERRRIA 136
++L+G C L E+ +G+L + L ++ LS + A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRG 196
++ G+ YL + + IH D+ NIL+ E++ AKI+DFGLS+ + +T G
Sbjct: 139 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT----MG 191
Query: 197 TRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIV 229
+ S N + T +DV+S+GV+L EIV
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 175 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 232 EAF-MEGIFTSKTDTWSFGVLLWEI 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 150 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 207 EAF-MEGIFTSKTDTWSFGVLLWEI 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 215 EAF-MEGIFTSKTDTWSFGVLLWEI 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGK---EIAVKKLIKIVEEGE-SEFRNEMKIIGRI-HHKNL 91
F++ IG G G+V K I + A+K++ + + + +F E++++ ++ HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE---------------QRLSWSERRRIA 136
++L+G C L E+ +G+L + L ++ LS + A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRG 196
++ G+ YL + + IH D+ NIL+ E++ AKI+DFGLS+ + +T G
Sbjct: 149 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT----MG 201
Query: 197 TRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIV 229
+ S N + T +DV+S+GV+L EIV
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 230 EAF-MEGIFTSKTDTWSFGVLLWEI 253
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 39 EEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E++G G G VYK G+ +A+K++ VE E E+ I+ + ++V G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
+ ++ +V E+ GS+ +++ + L+ E I ++GL YLH R IH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 158 DIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKAD 217
DIK NIL++ AK++DFG++ L TD + GT + APE+ V AD
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEIGYNCV-AD 207
Query: 218 VYSFGVMLLEIV 229
++S G+ +E+
Sbjct: 208 IWSLGITAIEMA 219
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 165 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 222 EAF-MEGIFTSKTDTWSFGVLLWEI 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 74 SEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR 133
+ + E++ + H +++ L S ++ +V E++ G L + + + R+ E R
Sbjct: 56 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEAR 114
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQ-TRTYT 192
R+ +I+ + Y H ++H D+KP N+L+D AKI+DFGLS ++ + RT
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171
Query: 193 VLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDE 237
G+ Y APE+ S + D++S GV+L ++C D+
Sbjct: 172 ---GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 216 EAF-MEGIFTSKTDTWSFGVLLWEI 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 148 DECETRIIHCDIKPHNILMD---ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 185 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 242 EAF-MEGIFTSKTDTWSFGVLLWEI 265
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 40 EIGRGGSGRVYKG--CINGGKEIAVKKL-IKIVEEGE--SEFRNE--MKIIGRIHHKNLV 92
EIG G G+V+K NGG+ +A+K++ ++ EEG S R ++ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 93 DLVGFCSEG-----SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
L C+ + LV+E + L E + + + +++ GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
R++H D+KP NIL+ S + K++DFGL+++ T V+ T Y APE+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 208 RNNRITVKADVYSFGVMLLEI 228
+++ T D++S G + E+
Sbjct: 193 QSSYAT-PVDLWSVGCIFAEM 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 230 EAF-MEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 216 EAF-MEGIFTSKTDTWSFGVLLWEI 239
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-H 87
N + +GRG G+V + G + A + +K+++EG SE R +E+KI+ I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 88 HKNLVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR------------LSWSERRR 134
H N+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV- 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 194 LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 206 ARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 199 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 256 EAF-MEGIFTSKTDTWSFGVLLWEI 279
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 35 ENFK--EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHK 89
ENF+ E+IG G G VYK E+ K I++ E E S E+ ++ ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
N+V L+ + LV+E + + A + + ++++GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
R++H D+KP N+L++ K++DFGL++ RTY T Y APE+
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGC 181
Query: 210 NRITVKADVYSFGVMLLEIVCCR 232
+ D++S G + E+V R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 40 EIGRGGSGRVYKG--CINGGKEIAVKKL-IKIVEEGE--SEFRNE--MKIIGRIHHKNLV 92
EIG G G+V+K NGG+ +A+K++ ++ EEG S R ++ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 93 DLVGFCSEG-----SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
L C+ + LV+E + L E + + + +++ GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
R++H D+KP NIL+ S + K++DFGL+++ T V+ T Y APE+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 208 RNNRITVKADVYSFGVMLLEI 228
+++ T D++S G + E+
Sbjct: 193 QSSYAT-PVDLWSVGCIFAEM 212
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 41 IGRGGSGRVYKGCINGGK------EIAVKKLIKIV-EEGESEFRNEMKIIGRIHHKNLVD 93
+G G G VY+G ++G ++AVK L ++ E+ E +F E II + +H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR------LSWSERRRIALEIMEGLHYLH 147
+G + R ++ E M G L + L R L+ + +A +I G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 148 DECETRIIHCDIKPHNILMDESWK---AKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAP 203
E IH DI N L+ AKI DFG+++ + + R + P
Sbjct: 176 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 204 ELHSRNNRITVKADVYSFGVMLLEI 228
E T K D +SFGV+L EI
Sbjct: 233 EAF-MEGIFTSKTDTWSFGVLLWEI 256
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 40 EIGRGGSGRVYKG--CINGGKEIAVKKL-IKIVEEGE--SEFRNE--MKIIGRIHHKNLV 92
EIG G G+V+K NGG+ +A+K++ ++ EEG S R ++ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 93 DLVGFCSEG-----SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
L C+ + LV+E + L E + + + +++ GL +LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
R++H D+KP NIL+ S + K++DFGL+++ T V+ T Y APE+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 208 RNNRITVKADVYSFGVMLLEI 228
+++ T D++S G + E+
Sbjct: 193 QSSYAT-PVDLWSVGCIFAEM 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMK------IIGRIHHKNLVDL 94
+G+G G+V+ G + +K++++ + R+ ++ I+ ++H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 95 -VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
F +EG L+ +F+R G +L R + + ++E + E+ L +LH
Sbjct: 92 HYAFQTEG-KLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--- 144
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
II+ D+KP NIL+DE K++DFGLSK + + Y+ GT Y APE+ +R
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 212 ITVKADVYSFGVMLLEIVC 230
T AD +SFGV++ E++
Sbjct: 204 -TQSADWWSFGVLMFEMLT 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLV----- 92
+ +G GG+G V+ N K +A+KK++ + E+KII R+ H N+V
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 93 ---------DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL-EIMEG 142
D VG +E ++ +V E+M L N+L EQ E R+ + +++ G
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL---EQGPLLEEHARLFMYQLLRG 132
Query: 143 LHYLHDECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRG--TRG 199
L Y+H ++H D+KP N+ ++ E KI DFGL++++ + + G T+
Sbjct: 133 LKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
Y +P L N T D+++ G + E++ +
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 74 SEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR 133
+ + E++ + H +++ L S ++ +V E++ G L + + + R+ E R
Sbjct: 56 GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEAR 114
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
R+ +I+ + Y H ++H D+KP N+L+D AKI+DFGLS ++ +
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-----F 166
Query: 194 LR---GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDE 237
LR G+ Y APE+ S + D++S GV+L ++C D+
Sbjct: 167 LRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMK------IIGRIHHKNLVDL 94
+G+G G+V+ G + +K++++ + R+ ++ I+ ++H +V L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 95 -VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
F +EG L+ +F+R G +L R + + ++E + E+ L +LH
Sbjct: 93 HYAFQTEG-KLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--- 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
II+ D+KP NIL+DE K++DFGLSK + + Y+ GT Y APE+ +R
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 204
Query: 212 ITVKADVYSFGVMLLEIVC 230
T AD +SFGV++ E++
Sbjct: 205 -TQSADWWSFGVLMFEMLT 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMK------IIGRIHHKNLVDL 94
+G+G G+V+ G + +K++++ + R+ ++ I+ ++H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 95 -VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER--RRIALEIMEGLHYLHDECE 151
F +EG L+ +F+R G +L R + + ++E + E+ L +LH
Sbjct: 92 HYAFQTEG-KLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--- 144
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
II+ D+KP NIL+DE K++DFGLSK + + Y+ GT Y APE+ +R
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 212 ITVKADVYSFGVMLLEIVC 230
T AD +SFGV++ E++
Sbjct: 204 -TQSADWWSFGVLMFEMLT 221
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 23 RSFSYEQIVLASENFKEEIGRGGSGRVYKGC-INGGKEIAVKKLIK-IVEEGESEFRNEM 80
RS S KE +G GG G V + + G+++A+K+ + + + + E+
Sbjct: 4 RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEI 63
Query: 81 KIIGRIHHKNLV------DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER-- 132
+I+ +++H N+V D + + LL E+ G L L + E E
Sbjct: 64 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 133 RRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTR 189
R + +I L YLH E RIIH D+KP NI++ + KI D G +K L DQ
Sbjct: 124 RTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 178
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
T GT Y APEL + + TV D +SFG + E +
Sbjct: 179 LCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECI 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 23 RSFSYEQIVLASENFKEEIGRGGSGRVYKGC-INGGKEIAVKKLIK-IVEEGESEFRNEM 80
RS S KE +G GG G V + + G+++A+K+ + + + + E+
Sbjct: 5 RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEI 64
Query: 81 KIIGRIHHKNLV------DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER-- 132
+I+ +++H N+V D + + LL E+ G L L + E E
Sbjct: 65 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 133 RRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTR 189
R + +I L YLH E RIIH D+KP NI++ + KI D G +K L DQ
Sbjct: 125 RTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 179
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
T GT Y APEL + + TV D +SFG + E +
Sbjct: 180 LCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECI 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V + G +IAVKKL + + + +R E++++ + H+N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 97 FCSEGS-----NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 172
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 228
Query: 212 ITVKADVYSFGVMLLEIVCCR 232
+ D++S G ++ E++ R
Sbjct: 229 YNMTVDIWSVGCIMAELLTGR 249
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I EG
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 182
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AVK + K S + E++I+
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R+ E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAP 203
Y H + I+H D+K N+L+D KI+DFG S + ++ T+ G+ Y AP
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAP 181
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVC 230
EL + DV+S GV+L +V
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 40 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 89
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 90 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 205 XXKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AVK + K S + E++I+
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R+ E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAP 203
Y H + I+H D+K N+L+D KI+DFG S + ++ T+ G+ Y AP
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAP 181
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVC 230
EL + DV+S GV+L +V
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
+IG+G G V+K G+++A+KK ++ E E E E+KI+ + H+N+V+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 94 LVGFC---SEGSNR-----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHY 145
L+ C + NR LV++F + L LL + + SE +R+ ++ GL+Y
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 146 LHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK---LLKTDQTRTYTVLRGTRGYTA 202
+H +I+H D+K N+L+ K++DFGL++ L K Q Y T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 203 PELHSRNNRITVKADVYSFGVMLLEI 228
PEL D++ G ++ E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH 88
+I S ++++G G G V+ N ++AVK + K F E ++ + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 236
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE-QRLSWSERRRIALEIMEGLHYLH 147
LV L ++ ++ EFM GSL + L E + + + +I EG+ ++
Sbjct: 237 DKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
+ IH D++ NIL+ S KI+DFGL+++ + +TAPE +
Sbjct: 296 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK----------WTAPEAIN 342
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ T+K+DV+SFG++L+EIV + + + E++
Sbjct: 343 FGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 25/281 (8%)
Query: 40 EIGRGGSGRVYKGCING-----GKEIAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVD 93
++G G G+V C + G+ +AVK L + S ++ E+ I+ ++H++++
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 94 LVGFCSE-GSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
G C + G+ L LV E++ GSL + L R + ++ A +I EG+ YLH +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRN 209
IH D+ N+L+D KI DFGL+K + G + APE +
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC-LKE 211
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQE-- 267
+ +DV+SFGV L E++ + +S + LI A L L+ E
Sbjct: 212 YKFYYASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 270
Query: 268 ---DVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGI 305
D E +L+K C E E + RPT + +I +++ +
Sbjct: 271 PRPDKCPAEVYHLMKN---CWETEASFRPTFENLIPILKTV 308
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
+IG+G G V+K G+++A+KK ++ E E E E+KI+ + H+N+V+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 94 LVGFC---SEGSNR-----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHY 145
L+ C + NR LV++F + L LL + + SE +R+ ++ GL+Y
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 146 LHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK---LLKTDQTRTYTVLRGTRGYTA 202
+H +I+H D+K N+L+ K++DFGL++ L K Q Y T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 203 PELHSRNNRITVKADVYSFGVMLLEI 228
PEL D++ G ++ E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIK---IVEEGESE-FRNEMKIIGRIHHKNLV 92
F +G+G G+V + ++ K++K I+++ + E E +I+ + +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 93 DLVGFCSEGSNRLL-VYEFMRNGSLGNLLFRAEQ--RLSWSERRRIALEIMEGLHYLHDE 149
+ C + +RL V EF+ NG G+L+F ++ R + R A EI+ L +LHD+
Sbjct: 87 TQLFCCFQTPDRLFFVMEFV-NG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
II+ D+K N+L+D K++DFG+ K + T T GT Y APE+ +
Sbjct: 144 ---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC-GTPDYIAPEI-LQE 198
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVD--------ESLRDDEIVLIDWAHQ 252
D ++ GV+L E++C + E++ +DE+V W H+
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
+IG+G G V+K G+++A+KK ++ E E E E+KI+ + H+N+V+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 94 LVGFC---SEGSNR-----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHY 145
L+ C + NR LV++F + L LL + + SE +R+ ++ GL+Y
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 146 LHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK---LLKTDQTRTYTVLRGTRGYTA 202
+H +I+H D+K N+L+ K++DFGL++ L K Q Y T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 203 PELHSRNNRITVKADVYSFGVMLLEI 228
PEL D++ G ++ E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVD 93
+IG+G G V+K G+++A+KK ++ E E E E+KI+ + H+N+V+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 94 LVGFC---SEGSNR-----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHY 145
L+ C + NR LV++F + L LL + + SE +R+ ++ GL+Y
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 146 LHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK---LLKTDQTRTYTVLRGTRGYTA 202
+H +I+H D+K N+L+ K++DFGL++ L K Q Y T Y
Sbjct: 140 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 203 PELHSRNNRITVKADVYSFGVMLLEI 228
PEL D++ G ++ E+
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGK---EIAVKKLIKIVEEGE-SEFRNEMKIIGRI-HHKNL 91
F++ IG G G+V K I + A+K++ + + + +F E++++ ++ HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE---------------QRLSWSERRRIA 136
++L+G C L E+ +G+L + L ++ LS + A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRG 196
++ G+ YL + + IH ++ NIL+ E++ AKI+DFGLS+ + +T G
Sbjct: 146 ADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT----MG 198
Query: 197 TRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIV 229
+ S N + T +DV+S+GV+L EIV
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-H 87
N + +GRG G+V + G + A + +K+++EG SE R +E+KI+ I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 88 HKNLVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR------------LSWSERRR 134
H N+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV- 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 194 LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 206 ARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRI-HHKNLVDLVG 96
KE+IG G S V K CI+ K ++ +KI+++ + + E++I+ R H N++ L
Sbjct: 27 KEDIGVG-SYSVCKRCIH--KATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+G +V E M+ G L + + R ++ S E + I + + YLH + ++H
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 157 CDIKPHNIL-MDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRI 212
D+KP NIL +DES +I DFG +K L+ + T T + APE+ R
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQG-Y 197
Query: 213 TVKADVYSFGVMLLEIV 229
D++S GV+L ++
Sbjct: 198 DAACDIWSLGVLLYTML 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 29/229 (12%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLL---------FRAEQR----LSWSERRRIA 136
+V+L+G C++ G +++ EF + G+L L ++ E L+ +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV-LR 195
++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D R
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 196 GTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
+ APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 212 LPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 186
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 25 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 74
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 75 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 190 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 40 EIGRGGSGRVYKGCINGGK---EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLVDLV 95
E+G G G V +G K ++A+K L + E+ ++E E +I+ ++ + +V L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G C + +LV E G L L + + S + ++ G+ YL E +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRI 212
H D+ N+L+ AKISDFGLSK L D + YT + + APE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECIN-FRKF 190
Query: 213 TVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
+ ++DV+S+GV + E + + + ++ E++
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 40 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 89
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 90 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 205 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 33 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 82
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 83 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 141 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 198 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLVDLVGFC 98
IG G G V N K +A+KK+ + + E+KI+ R H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFR--AEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ + ++ +G L++ Q LS +I+ GL Y+H ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRITV 214
D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ + T
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 215 KADVYSFGVMLLEIVCCR 232
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 22 LRSFSYEQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRN 78
+ S + EQ + + ++ IG+G +V + G+E+AVK + K S +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E++I+ ++H N+V L LV E+ G + + L A R+ E R +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT-DQTRTYTVLRGT 197
I+ + Y H + I+H D+K N+L+D KI+DFG S ++ T+ G+
Sbjct: 123 IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GS 176
Query: 198 RGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
Y APEL + DV+S GV+L +V
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 20 IKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCIN-GGKEIAVKKL---IKIVEEGESE 75
+K RSF V E IG G G V G+++A+KK+ +V +
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 76 FRNEMKIIGRIHHKNLVDLVGFC------SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSW 129
R E+KI+ H N++ + E + +V + M + + + + Q L+
Sbjct: 102 LR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDL--HQIIHSSQPLTL 158
Query: 130 SERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR 189
R +++ GL Y+H ++IH D+KP N+L++E+ + KI DFG+++ L T
Sbjct: 159 EHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 215
Query: 190 TYTVLR---GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRK 233
+ TR Y APEL + T D++S G + E++ R+
Sbjct: 216 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 29 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 78
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 79 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 137 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 194 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 40 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 89
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 90 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 205 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 186
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 49/332 (14%)
Query: 3 SYKIISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAV 62
S + R+ S +F ++ +EQ+ + E IG+G G+VY G +G E+A+
Sbjct: 10 SARSFPRKASQTSIF--LQEWDIPFEQLEIG-----ELIGKGRFGQVYHGRWHG--EVAI 60
Query: 63 KKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNL 119
+ LI I + E + F+ E+ + H+N+V +G C + ++ + +L ++
Sbjct: 61 R-LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSV 119
Query: 120 LFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGL 179
+ A+ L ++ R+IA EI++G+ YLH + I+H D+K N+ D K I+DFGL
Sbjct: 120 VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGL 175
Query: 180 SKLLKTDQT-RTYTVLRGTRGY---TAPEL------HSRNNRITVK--ADVYSFGVMLLE 227
+ Q R LR G+ APE+ + +++ +DV++ G + E
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
Query: 228 IVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQEDVNIEEF---ENLVKIGLWC 284
+ +W + A + + N+ + + + I L+C
Sbjct: 236 LHAR----------------EWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFC 279
Query: 285 VECELNLRPTMKQVIWMMEGIVPPHQNMLTHP 316
E RPT +++ M+E + P L+HP
Sbjct: 280 WAFEQEERPTFTKLMDMLEKL-PKRNRRLSHP 310
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 26 SYEQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKI 82
S EQ + + + IG+G +V I G+E+A+K + K S + E++I
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ ++H N+V L L+ E+ G + + L A R+ E R +I+
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSA 123
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT-DQTRTYTVLRGTRGYT 201
+ Y H + RI+H D+K N+L+D KI+DFG S + T+ G+ Y
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYA 177
Query: 202 APELHSRNNRITVKADVYSFGVMLLEIVC 230
APEL + DV+S GV+L +V
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVS 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH----------- 88
+G+G G+V K + A+KK I+ EE S +E+ ++ ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 89 --KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYL 146
+N V + S + E+ N +L +L+ E R+ +I+E L Y+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-------LLKTD------QTRTYTV 193
H + IIH ++KP NI +DES KI DFGL+K +LK D + T
Sbjct: 133 HSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 194 LRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
GT Y A E+ K D YS G++ E +
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AV+ + K S + E++I+
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R+ E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAP 203
Y H + I+H D+K N+L+D KI+DFG S + ++ T+ G+ Y AP
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAP 181
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIVC 230
EL + DV+S GV+L +V
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 32 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 81
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 82 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 140 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 197 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 189
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 40 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 89
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 90 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 205 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 59/291 (20%)
Query: 39 EEIGRGGSGRVYKGC--INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
E IG GG G+V+K I+G + IK V+ + E+K + ++ H N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYV-----IKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 97 ----------FCSEGSNR------LLVYEFMRNGSLGNLLFRAEQRLSWSERRR------ 134
S+ S+R + EF G+L EQ W E+RR
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL-------EQ---WIEKRRGEKLDK 121
Query: 135 -IALEIME----GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR 189
+ALE+ E G+ Y+H + ++I+ D+KP NI + ++ + KI DFGL LK D R
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV-CCRKNVDES-----LRDDE 243
+ +GT Y +PE S + + D+Y+ G++L E++ C + S LRD
Sbjct: 179 XRS--KGTLRYMSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG- 234
Query: 244 IVLIDWAHQCYEAGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPT 294
+I E LQ L+S + + E L + +W E N R T
Sbjct: 235 --IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHT 283
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 20 IKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCIN-GGKEIAVKKL---IKIVEEGESE 75
+K RSF V E IG G G V G+++A+KK+ +V +
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 76 FRNEMKIIGRIHHKNLVDLVGFC------SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSW 129
R E+KI+ H N++ + E + +V + M + + + + Q L+
Sbjct: 101 LR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDL--HQIIHSSQPLTL 157
Query: 130 SERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR 189
R +++ GL Y+H ++IH D+KP N+L++E+ + KI DFG+++ L T
Sbjct: 158 EHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 214
Query: 190 TYTVLR---GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRK 233
+ TR Y APEL + T D++S G + E++ R+
Sbjct: 215 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 179
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 195
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 238
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 210
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 253
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 191
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 234
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AVK + K S + E++I+
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R+ E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
Y H + I+H D+K N+L+D KI+DFG S G Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPE 182
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVC 230
L + DV+S GV+L +V
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I G+E+A+K + K S + E++I+
Sbjct: 10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L L+ E+ G + + L A R+ E R +I+ +
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSAVQ 128
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
Y H + RI+H D+K N+L+D KI+DFG S G Y APE
Sbjct: 129 YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--KLDAFCGAPPYAAPE 183
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVC 230
L + DV+S GV+L +V
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 26 SYEQIVLASENFKEEIG--RGGSGRVYKGCINGGKEIAVKK-LIKIVEEGESEFRNEMKI 82
++ Q+VLA E IG + RV K + K A +K L ++ E E MK+
Sbjct: 81 AFGQVVLA-----EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-----MKM 130
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL---------------FRAEQRL 127
IG+ HKN+++L+G C++ ++ E+ G+L L E++L
Sbjct: 131 IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 128 SWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK-LLKTD 186
S + A ++ G+ YL + IH D+ N+L+ E KI+DFGL++ + D
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 187 QTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
+ T R + APE + +RI T ++DV+SFGV+L EI
Sbjct: 246 YYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 28/264 (10%)
Query: 4 YKIISRQVSSPDVFEEIKLRSFSYEQIVLASENFKE---------------EIGRGGSGR 48
Y +++SPD + + + +E E K+ E+G G G
Sbjct: 292 YTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGS 351
Query: 49 VYKGCINGGK---EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLVDLVGFCSEGSNR 104
V +G K ++A+K L + E+ ++E E +I+ ++ + +V L+G C +
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 410
Query: 105 LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNI 164
+LV E G L L + + S + ++ G+ YL E +H ++ N+
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNV 467
Query: 165 LMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR---GYTAPELHSRNNRITVKADVYSF 221
L+ AKISDFGLSK L D + YT + + APE + + + ++DV+S+
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECIN-FRKFSSRSDVWSY 525
Query: 222 GVMLLEIVCCRKNVDESLRDDEIV 245
GV + E + + + ++ E++
Sbjct: 526 GVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLI--KIVEEGESEFRNEMKI--IGRIHHKNLVD 93
+E +G G G+V ++ K I +++++ + R E +I + + H +++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
L + ++ ++V E+ G L + + ++R++ E RR +I+ + Y H +
Sbjct: 74 LYDVITTPTDIVMVIEYA-GGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCH---RHK 128
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
I+H D+KP N+L+D++ KI+DFGLS ++ TD T G+ Y APE+ +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVINGKLYAG 186
Query: 214 VKADVYSFGVMLLEIVCCRKNVDESL 239
+ DV+S G++L ++ R D+
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 145
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGES-----------EFRNEMKIIGRIHHK 89
I G G V G + G +A+K++ V +G + E++++ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 90 NLVDL----VGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
N++ L V F ++L LV E MR L ++ +S + I+ GLH
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
LH E ++H D+ P NIL+ ++ I DF L++ D +T+ V R Y APE
Sbjct: 149 VLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH--RWYRAPE 203
Query: 205 LHSRNNRITVKADVYSFGVMLLEI 228
L + T D++S G ++ E+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 23/239 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVD 93
+ +G G G V ++G G ++A+KKL + + + +R E++++ + H+N++
Sbjct: 31 QPVGSGAYGAVC-SAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIG 88
Query: 94 LVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
L+ + + ++ LV FM LG L+ ++L + + ++++GL Y+H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
IIH D+KP N+ ++E + KI DFGL++ + D V+ TR Y APE+
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV--TRWYRAPEVIL 198
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
R T D++S G ++ E++ + S D++ I A +Q L SD+
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 32/234 (13%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-H 87
N + +GRG G+V + G + A + +K+++EG SE R +E+KI+ I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 88 HKNLVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR---------------LSWSE 131
H N+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 132 RRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTY 191
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 192 TV-LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 207 KGDARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 145
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGES-----------EFRNEMKIIGRIHHK 89
I G G V G + G +A+K++ V +G + E++++ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 90 NLVDL----VGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
N++ L V F ++L LV E MR L ++ +S + I+ GLH
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
LH E ++H D+ P NIL+ ++ I DF L++ D +T+ V R Y APE
Sbjct: 149 VLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH--RWYRAPE 203
Query: 205 LHSRNNRITVKADVYSFGVMLLEI 228
L + T D++S G ++ E+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCINGG------KEIAVKKLIKIVEEGE--SEFRNE 79
++I L++ F EE+G G+VYKG + G + +A+K L K EG EFR+E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 79
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLF---------------RAE 124
+ R+ H N+V L+G ++ +++ + +G L L +
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLK 184
L + + +I G+ YL ++H D+ N+L+ + KISD G L +
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG---LFR 193
Query: 185 TDQTRTYTVLRGTR----GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y L G + APE + ++ +D++S+GV+L E+
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEA-IMYGKFSIDSDIWSYGVVLWEV 240
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 145
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNAMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 147
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 145
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 28 EQIVLASENFK--EEIGRGGSGRVYKGCI-NGGKEIAVKKLIK--IVEEGESE-FRNEMK 81
+Q+ L E+F+ + IGRG G V + N K A+K L K +++ E+ FR E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIME 141
++ K + L + +N LV ++ G L LL + E RL R E++
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 142 GLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYT 201
+ +H + +H DIKP NILMD + +++DFG L D T +V GT Y
Sbjct: 187 AIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 202 APE----LHSRNNRITVKADVYSFGVMLLEIV 229
+PE + R + D +S GV + E++
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AV+ + K S + E++I+
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R+ E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL----KTDQTRTYTVLRGTRGY 200
Y H + I+H D+K N+L+D KI+DFG S K D+ G+ Y
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE------FCGSPPY 178
Query: 201 TAPELHSRNNRITVKADVYSFGVMLLEIVC 230
APEL + DV+S GV+L +V
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 153
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 213
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 214 TKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 145
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL K + + +R E++++ + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 211
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCINGG------KEIAVKKLIKIVEEGE--SEFRNE 79
++I L++ F EE+G G+VYKG + G + +A+K L K EG EFR+E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 62
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLF---------------RAE 124
+ R+ H N+V L+G ++ +++ + +G L L +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLK 184
L + + +I G+ YL ++H D+ N+L+ + KISD G L +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG---LFR 176
Query: 185 TDQTRTYTVLRGTR----GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y L G + APE + ++ +D++S+GV+L E+
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEA-IMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 143
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 203
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 204 TKSIDIWSVGCILAEMLSNR 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 72/304 (23%)
Query: 39 EEIGRGGSGRVYKGCIN-GGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
E IG GG G+V+K GK ++++ E+ E E+K + ++ H N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVHYNG- 72
Query: 98 C------------------------SEGSNR------LLVYEFMRNGSLGNLLFRAEQRL 127
C S+ S+R + EF G+L EQ
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL-------EQ-- 123
Query: 128 SWSERRR-------IALEIME----GLHYLHDECETRIIHCDIKPHNILMDESWKAKISD 176
W E+RR +ALE+ E G+ Y+H + ++IH D+KP NI + ++ + KI D
Sbjct: 124 -WIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 177 FGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV-CCRKNV 235
FGL LK D RT + +GT Y +PE S + + D+Y+ G++L E++ C
Sbjct: 180 FGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAF 236
Query: 236 DES-----LRDDEIVLIDWAHQCYEAGELQNLVSDQEDVNIEEFENLVKIGLWCVECELN 290
+ S LRD +I E LQ L+S + + E L + +W E N
Sbjct: 237 ETSKFFTDLRDG---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 293
Query: 291 LRPT 294
R T
Sbjct: 294 ERHT 297
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 150
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 210
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 211 TKSIDIWSVGCILAEMLSNR 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 153
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 209
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 151
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 211
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 212 TKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 142
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 202
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 203 TKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
IG G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 204
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIK----IVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG + Y+ KE+ K++ + + + E+ I + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L R + ++ E R + ++G+ YLH+ R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKR-RKAVTEPEARYFMRQTIQGVQYLHN---NRVIH 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ +++ KI DFGL+ ++ D R T L GT Y APE+ + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGH-SFEV 223
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
D++S G +L ++ + + S
Sbjct: 224 DIWSLGCILYTLLVGKPPFETS 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 143
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 203
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 204 TKSIDIWSVGCILAEMLSNR 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 195
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 25 FSYEQIVLASENFKEE--IGRGGSGRVY--KGCINGGKEIAVK----KLIKIVEEGESEF 76
F + S+ +K + +G+G G V K I G +E AVK + +K + ES
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 74
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
R E++++ ++ H N++ L F + LV E G L + + + +R S + RI
Sbjct: 75 R-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARII 132
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTV 193
+++ G+ Y+H + +I+H D+KP N+L++ K +I DFGLS + + +
Sbjct: 133 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 189
Query: 194 LRGTRGYTAPE-LHSRNNRITVKADVYSFGVML 225
GT Y APE LH + K DV+S GV+L
Sbjct: 190 --GTAYYIAPEVLHGTYDE---KCDVWSTGVIL 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 20/199 (10%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLVGFC- 98
IG G G V++ + E+A+KK+++ + F+N E++I+ + H N+VDL F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL-------EIMEGLHYLHDECE 151
S G + V+ + + ++RA + + ++ L +++ L Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 152 TRIIHCDIKPHNILMDE-SWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+D S K+ DFG +K+L + + +R Y APEL
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPELIFGAT 217
Query: 211 RITVKADVYSFGVMLLEIV 229
T D++S G ++ E++
Sbjct: 218 NYTTNIDIWSTGCVMAELM 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 165
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 205
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVK----KLIKIVEEGES--EFRNEMKIIGRIHHKNL 91
EE+G G V K G GKE A K + + G S E E+ I+ I H N+
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L ++ +L+ E + G L + L E L+ E + +I++G+HYLH +
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK-- 134
Query: 152 TRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
RI H D+KP NI L+D++ + K+ DFG++ K + + + GT + APE+ +
Sbjct: 135 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVN 191
Query: 208 RNNRITVKADVYSFGVM 224
+ ++AD++S GV+
Sbjct: 192 YEP-LGLEADMWSIGVI 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 12/152 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGS--NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
E+ I+ ++ H N+V LV + + + +V+E + G + + + LS + R
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV--MEVPTLKPLSEDQARFYF 143
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLK-TDQTRTYTVLR 195
++++G+ YLH + +IIH DIKP N+L+ E KI+DFG+S K +D + TV
Sbjct: 144 QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-- 198
Query: 196 GTRGYTAPELHSRNNRI-TVKA-DVYSFGVML 225
GT + APE S +I + KA DV++ GV L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 67 KIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQR 126
K +E+ E NE+ ++ + H N++ L + LV EF G L + +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHK 142
Query: 127 LSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDES---WKAKISDFGLSKLL 183
+ I +I+ G+ YLH + I+H DIKP NIL++ KI DFGLS
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 184 KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
D + GT Y APE+ + + K DV+S GV++ ++C
Sbjct: 200 SKDYKLRDRL--GTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLC 242
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL + TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 40 EIGRGGSGRVYKGCING-----GKEIAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVD 93
++G G G+V C + G+ +AVK L + S ++ E+ I+ ++H++++
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 94 LVGFC-SEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
G C +G L LV E++ GSL + L R + ++ A +I EG+ YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRN 209
IH ++ N+L+D KI DFGL+K + G + APE +
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKE 194
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQE-- 267
+ +DV+SFGV L E++ + +S + LI A L L+ E
Sbjct: 195 YKFYYASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 268 ---DVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGI 305
D E +L+K C E E + RPT + +I +++ +
Sbjct: 254 PRPDKCPCEVYHLMKN---CWETEASFRPTFENLIPILKTV 291
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 41 IGRGGSGRVYK----GCINGGKEIAVKKLIKIV----EEGESEFRNEMKIIGRIHHKNLV 92
+G+GG G+V++ N GK A+K L K + + + + E I+ + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECET 152
DL+ G L+ E++ G L L R + + +A EI L +LH +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLHQKG-- 141
Query: 153 RIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNN 210
II+ D+KP NI+++ K++DFGL K D T T+T GT Y APE + S +N
Sbjct: 142 -IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPEILMRSGHN 199
Query: 211 RITVKADVYSFGVMLLEIV 229
R D +S G ++ +++
Sbjct: 200 R---AVDWWSLGALMYDML 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 162
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 218
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 219
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 204
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 154
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 210
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 25 FSYEQIVLASENFKEE--IGRGGSGRVY--KGCINGGKEIAVK----KLIKIVEEGESEF 76
F + S+ +K + +G+G G V K I G +E AVK + +K + ES
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 80
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
R E++++ ++ H N++ L F + LV E G L + + + +R S + RI
Sbjct: 81 R-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARII 138
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTV 193
+++ G+ Y+H + +I+H D+KP N+L++ K +I DFGLS + + +
Sbjct: 139 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 195
Query: 194 LRGTRGYTAPE-LHSRNNRITVKADVYSFGVML 225
GT Y APE LH + K DV+S GV+L
Sbjct: 196 --GTAYYIAPEVLHGTYDE---KCDVWSTGVIL 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 205
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVK----KLIKIVEEGES--EFRNEMKIIGRIHHKNL 91
EE+G G V K G GKE A K + + G S E E+ I+ I H N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L ++ +L+ E + G L + L E L+ E + +I++G+HYLH +
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK-- 127
Query: 152 TRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
RI H D+KP NI L+D++ + K+ DFG++ K + + + GT + APE+ +
Sbjct: 128 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 208 RNNRITVKADVYSFGVM 224
+ ++AD++S GV+
Sbjct: 185 YEP-LGLEADMWSIGVI 200
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 140
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 196
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 140
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 196
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 205
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 201
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 204
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 25 FSYEQIVLASENFKEE--IGRGGSGRVY--KGCINGGKEIAVK----KLIKIVEEGESEF 76
F + S+ +K + +G+G G V K I G +E AVK + +K + ES
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 97
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
R E++++ ++ H N++ L F + LV E G L + + + +R S + RI
Sbjct: 98 R-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARII 155
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTV 193
+++ G+ Y+H + +I+H D+KP N+L++ K +I DFGLS + + +
Sbjct: 156 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 212
Query: 194 LRGTRGYTAPE-LHSRNNRITVKADVYSFGVML 225
GT Y APE LH + K DV+S GV+L
Sbjct: 213 --GTAYYIAPEVLHGTYDE---KCDVWSTGVIL 240
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 201
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 201
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 201
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 206
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 204
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 142
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 198
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 25 FSYEQIVLASENFKEE--IGRGGSGRVY--KGCINGGKEIAVK----KLIKIVEEGESEF 76
F + S+ +K + +G+G G V K I G +E AVK + +K + ES
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 98
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
R E++++ ++ H N++ L F + LV E G L + + + +R S + RI
Sbjct: 99 R-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARII 156
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTV 193
+++ G+ Y+H + +I+H D+KP N+L++ K +I DFGLS + + +
Sbjct: 157 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 213
Query: 194 LRGTRGYTAPE-LHSRNNRITVKADVYSFGVML 225
GT Y APE LH + K DV+S GV+L
Sbjct: 214 --GTAYYIAPEVLHGTYDE---KCDVWSTGVIL 241
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 195
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 40 EIGRGGSGRVYKGCING-----GKEIAVKKL-IKIVEEGESEFRNEMKIIGRIHHKNLVD 93
++G G G+V C + G+ +AVK L + S ++ E+ I+ ++H++++
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 94 LVGFC-SEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
G C +G L LV E++ GSL + L R + ++ A +I EG+ YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRN 209
IH ++ N+L+D KI DFGL+K + G + APE +
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKE 194
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQE-- 267
+ +DV+SFGV L E++ + +S + LI A L L+ E
Sbjct: 195 YKFYYASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 268 ---DVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGI 305
D E +L+K C E E + RPT + +I +++ +
Sbjct: 254 PRPDKCPCEVYHLMKN---CWETEASFRPTFENLIPILKTV 291
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 154
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 210
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 141
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 197
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 189
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 205
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ + G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVK----KLIKIVEEGES--EFRNEMKIIGRIHHKNL 91
EE+G G V K G GKE A K + + G S E E+ I+ I H N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L ++ +L+ E + G L + L E L+ E + +I++G+HYLH +
Sbjct: 92 ITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK-- 148
Query: 152 TRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
RI H D+KP NI L+D++ + K+ DFG++ K + + + GT + APE+ +
Sbjct: 149 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIVN 205
Query: 208 RNNRITVKADVYSFGVM 224
+ ++AD++S GV+
Sbjct: 206 YEP-LGLEADMWSIGVI 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 211
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 31 VLASENFKEEIGRGGSGRVYKGCIN-GGKEIAVKKLIKIVE---EGESEFRNEMKIIGRI 86
VL +++G+G G V+K G+ +AVKK+ + + + FR M +
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 87 HHKNLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
H+N+V+L+ ++R LV+++M + + RA L ++ + ++++ +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMETDL--HAVIRANI-LEPVHKQYVVYQLIKVIK 123
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT------------------- 185
YLH ++H D+KP NIL++ K++DFGLS+
Sbjct: 124 YLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 186 -DQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
D T TR Y APE+ + + T D++S G +L EI+C +
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 211
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 219
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 166
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 222
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 162
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 218
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A++K+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ + G G VYKG I G+++ + IK + E S E +E +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR--GTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T + TR Y APE+ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY 209
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIGRIHHKNLVDLVGF 97
IG+G +V I GKE+AVK + K S + E++I+ ++H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHC 157
LV E+ G + + L A + E R +I+ + Y H + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLV-AHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHR 130
Query: 158 DIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+L+D KI+DFG S + ++ T+ G+ Y APEL +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEV 187
Query: 217 DVYSFGVMLLEIVC 230
DV+S GV+L +V
Sbjct: 188 DVWSLGVILYTLVS 201
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ R H+N++ D++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 150
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR--GTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T + TR Y APE+ +
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY 210
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 211 TKSIDIWSVGCILAEMLSNR 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 27 YEQIVLASENF--KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIG 84
Y Q ++ S+ + KE IG G K C++ K ++ +K++++ + + E++I+
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSEC-KRCVH--KATNMEYAVKVIDKSKRDPSEEIEILL 75
Query: 85 RI-HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
R H N++ L +G + LV E MR G L + + R ++ S E + I + +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTV 134
Query: 144 HYLHDECETRIIHCDIKPHNIL-MDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRG 199
YLH + ++H D+KP NIL +DES +I DFG +K L+ + T T
Sbjct: 135 EYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+ APE+ R D++S G++L ++
Sbjct: 191 FVAPEVLKRQG-YDEGCDIWSLGILLYTMLA 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + I + E S E +E +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 219
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 262
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 41 IGRGGSGRVYKGCINGGK----EIAVKKLIK-IVEEGESEFRNEMKIIGRIHHKNLVDLV 95
+G G G VY+G K +AVK K + + +F +E I+ + H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G E +++ E G LG+ L R + L +L+I + + YL +
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 131
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H DI NIL+ K+ DFGLS+ ++ + +V R + +PE R T
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRRFTTA 190
Query: 216 ADVYSFGVMLLEIV 229
+DV+ F V + EI+
Sbjct: 191 SDVWMFAVCMWEIL 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEI-AVKKLIK--IVEEG-ESEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G VY K I A+K L K + +EG E + R E++I + H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETRI 154
+ + L+ EF G L L ++ + E+R E+ + LHY H E ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH---ERKV 135
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
IH DIKP N+LM + KI+DFG S + + R GT Y PE+
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTH-DE 191
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDD---EIVLIDWAHQCYEAGELQNLVS 264
K D++ GV+ E + D + IV +D + + ++L+S
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEI-AVKKLIK--IVEEG-ESEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G VY K I A+K L K + +EG E + R E++I + H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETRI 154
+ + L+ EF G L L ++ + E+R E+ + LHY H E ++
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH---ERKV 136
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
IH DIKP N+LM + KI+DFG S + + R GT Y PE+
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTH-DE 192
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDD---EIVLIDWAHQCYEAGELQNLVS 264
K D++ GV+ E + D + IV +D + + ++L+S
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L++ + M G L + + + + ++I +G
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ + G G VYKG I G+++ + IK + E S E +E +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFGL+KLL ++ + Y G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEI-AVKKLIK--IVEEG-ESEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G VY K I A+K L K + +EG E + R E++I + H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETRI 154
+ + L+ EF G L L ++ + E+R E+ + LHY H E ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH---ERKV 135
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
IH DIKP N+LM + KI+DFG S + + R GT Y PE+
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTH-DE 191
Query: 215 KADVYSFGVMLLEIVCCRKNVDESLRDD---EIVLIDWAHQCYEAGELQNLVS 264
K D++ GV+ E + D + IV +D + + ++L+S
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ A +L+ + + +I+ GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCA--KLTDDHVQFLIYQILRGLKYIH---S 139
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD T V TR Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 195
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRI-HHKNLVDLVG 96
KE+IG G S V K CI+ K + +KI+++ + + E++I+ R H N++ L
Sbjct: 27 KEDIGVG-SYSVCKRCIH--KATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+G +V E + G L + + R ++ S E + I + + YLH + ++H
Sbjct: 84 VYDDGKYVYVVTELXKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 157 CDIKPHNIL-MDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRI 212
D+KP NIL +DES +I DFG +K L+ + T T + APE+ R
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQG-Y 197
Query: 213 TVKADVYSFGVML 225
D++S GV+L
Sbjct: 198 DAACDIWSLGVLL 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 31 VLASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-----EFRNEMKI 82
+L FK+ +G G G VYKG I G+++ + IK + E S E +E +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 83 IGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEG 142
+ + + ++ L+G C + +L+ + M G L + + + + ++I +G
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
++YL D R++H D+ N+L+ KI+DFG +KLL ++ + Y G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 203 PELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDEI 244
L S +RI T ++DV+S+GV + E++ + + EI
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGES--EFRNEMKIIG 84
EQ + + + IG+G +V I GKE+AVK + K S + E++I
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXK 68
Query: 85 RIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLH 144
++H N+V L LV E+ G + + L A R E R +I+ +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFRQIVSAVQ 127
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
Y H + I+H D+K N+L+D KI+DFG S G Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPE 182
Query: 205 LHSRNNRITVKADVYSFGVMLLEIVC 230
L + DV+S GV+L +V
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 209 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 40 EIGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGESEFRN----EMKIIGRIHHKNLVD 93
+IG G G V+K C N G+ +A+KK ++ E + + E++++ ++ H NLV+
Sbjct: 10 KIGEGSYGVVFK-CRNRDTGQIVAIKKFLE--SEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
L+ LV+E+ + L L R ++ + + I + ++ +++ H +
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFCH---KHN 122
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
IH D+KP NIL+ + K+ DFG ++LL T + Y TR Y +PEL + +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 214 VKADVYSFGVMLLEIV 229
DV++ G + E++
Sbjct: 182 PPVDVWAIGCVFAELL 197
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIK----IVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG + Y+ KE+ K++ + + + E+ I + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L R + ++ E R + ++G+ YLH+ R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKR-RKAVTEPEARYFMRQTIQGVQYLHN---NRVIH 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ +++ KI DFGL+ ++ D R L GT Y APE+ + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAPEVLCKKGH-SFEV 223
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
D++S G +L ++ + + S
Sbjct: 224 DIWSLGCILYTLLVGKPPFETS 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 41 IGRGGSGRVYKGCINGGK----EIAVKKLIK-IVEEGESEFRNEMKIIGRIHHKNLVDLV 95
+G G G VY+G K +AVK K + + +F +E I+ + H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G E +++ E G LG+ L R + L +L+I + + YL +
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 135
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H DI NIL+ K+ DFGLS+ ++ + +V R + +PE R T
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRRFTTA 194
Query: 216 ADVYSFGVMLLEIV 229
+DV+ F V + EI+
Sbjct: 195 SDVWMFAVCMWEIL 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 41 IGRGGSGRVYKGCINGGK----EIAVKKLIK-IVEEGESEFRNEMKIIGRIHHKNLVDLV 95
+G G G VY+G K +AVK K + + +F +E I+ + H ++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G E +++ E G LG+ L R + L +L+I + + YL +
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 147
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H DI NIL+ K+ DFGLS+ ++ + +V R + +PE R T
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRRFTTA 206
Query: 216 ADVYSFGVMLLEIV 229
+DV+ F V + EI+
Sbjct: 207 SDVWMFAVCMWEIL 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 31/231 (13%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLL-FRAEQRLSWSERRR-------------- 134
+V+L+G C++ G +++ EF + G+L L + + + + E
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV- 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 194 LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 212 ARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 209 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + +VY + + ++R A+Q L + ++ L Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 197
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 198 TDYTSSIDVWSAGCVLAELL 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 200 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 200 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIK----IVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG + Y+ KE+ K++ + + + E+ I + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L + + ++ E R + ++G+ YLH+ R+IH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQTIQGVQYLHN---NRVIH 149
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ +++ KI DFGL+ ++ D R L GT Y APE+ + + +
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD-LCGTPNYIAPEVLCKKGH-SFEV 207
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
D++S G +L ++ + + S
Sbjct: 208 DIWSLGCILYTLLVGKPPFETS 229
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE-------SEFRNEMKIIGRIHHKNL 91
+++G G G V + K ++ IKI+++ +E+ ++ ++ H N+
Sbjct: 10 KKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGN-LLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
+ L F + N LV E R G L + ++ R Q+ S + I +++ G YLH
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGTTYLH--- 121
Query: 151 ETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
+ I+H D+KP N+L++ + KI DFGLS + + GT Y APE+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLR 179
Query: 208 RNNRITVKADVYSFGVMLLEIVC 230
+ + K DV+S GV+L ++C
Sbjct: 180 K--KYDEKCDVWSCGVILYILLC 200
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 36 NFKEEIGRGGSGRVYKGCING------GKEIAVKKLIKIVEEGESE-FRNEMKIIGRI-H 87
+F + +G G G+V + G +AVK L E E +E+K++ + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR-------------- 133
H N+V+L+G C+ G L++ E+ G L N L R S+
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 134 ---RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT 190
+ ++ +G+ +L + IH D+ NIL+ KI DFGL++ +K D
Sbjct: 162 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS--N 216
Query: 191 YTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y V R + APE N T ++DV+S+G+ L E+
Sbjct: 217 YVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWEL 256
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 25 FSYEQIVLASENFKEE--IGRGGSGRVY--KGCINGGKEIAVK----KLIKIVEEGESEF 76
F + S+ +K + +G+G G V K I G +E AVK + +K + ES
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 74
Query: 77 RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA 136
R E++++ ++ H N+ L F + LV E G L + + + +R S + RI
Sbjct: 75 R-EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARII 132
Query: 137 LEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTV 193
+++ G+ Y H + +I+H D+KP N+L++ K +I DFGLS + + +
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 194 LRGTRGYTAPE-LHSRNNRITVKADVYSFGVML 225
GT Y APE LH + K DV+S GV+L
Sbjct: 190 --GTAYYIAPEVLHGTYDE---KCDVWSTGVIL 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ D+ Y TR Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV---ATRWYRAPEIMLNWMH 206
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG----- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 14 EEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 73 ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDK 127
Query: 133 RRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-- 188
I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ T + + APE + + + K+DV+SFGV++ E + ++ E+ +
Sbjct: 185 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG----- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 14 EEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 73 ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDK 127
Query: 133 RRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-- 188
I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ T + + APE + + + K+DV+SFGV++ E + ++ E+ +
Sbjct: 185 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI D+GL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ D+ Y TR Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV---ATRWYRAPEIMLNWMH 206
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD V TR Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV--ATRWYRAPEIMLNWMH 195
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 16 VFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG--- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 2 ALEEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 59
Query: 73 --ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWS 130
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVK 115
Query: 131 ERRRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT 188
++ I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 116 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 189 --RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVL 246
+ T + + APE + + + K+DV+SFGV++ E + ++ E+
Sbjct: 173 YYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 247 I 247
+
Sbjct: 232 M 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 41 IGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGE--SEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G V K C + +E AVK + K + + S E++++ ++ H N++ L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ S+ +V E G L + + + +R S + RI ++ G+ Y+H + I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 157 CDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
D+KP NIL++ K KI DFGLS + + + GT Y APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEV--LRGTYD 200
Query: 214 VKADVYSFGVML 225
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 209 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ TD V TR Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXV--ATRWYRAPEIMLNWMH 219
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ D+ Y TR Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV---ATRWYRAPEIMLNWMH 206
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ H+N++ D++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 147
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE-------SEFRNEMKIIGRIHHKNL 91
+++G G G V + K ++ IKI+++ +E+ ++ ++ H N+
Sbjct: 27 KKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGN-LLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
+ L F + N LV E R G L + ++ R Q+ S + I +++ G YLH
Sbjct: 84 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGTTYLH--- 138
Query: 151 ETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
+ I+H D+KP N+L++ + KI DFGLS + + GT Y APE+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLR 196
Query: 208 RNNRITVKADVYSFGVMLLEIVC 230
+ + K DV+S GV+L ++C
Sbjct: 197 K--KYDEKCDVWSCGVILYILLC 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 36 NFKEEIGRGGSGRVYKGCING------GKEIAVKKLIKIVEEGESE-FRNEMKIIGRI-H 87
+F + +G G G+V + G +AVK L E E +E+K++ + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR-------------- 133
H N+V+L+G C+ G L++ E+ G L N L R S+
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 134 ---RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT 190
+ ++ +G+ +L + IH D+ NIL+ KI DFGL++ +K D
Sbjct: 169 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDS--N 223
Query: 191 YTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y V R + APE N T ++DV+S+G+ L E+
Sbjct: 224 YVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 36 NFKEEIGRGGSGRVYKGCING------GKEIAVKKLIKIVEEGESE-FRNEMKIIGRI-H 87
+F + +G G G+V + G +AVK L E E +E+K++ + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR-------------- 133
H N+V+L+G C+ G L++ E+ G L N L R S+
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 134 ---RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT 190
+ ++ +G+ +L + IH D+ NIL+ KI DFGL++ +K D
Sbjct: 164 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS--N 218
Query: 191 YTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y V R + APE N T ++DV+S+G+ L E+
Sbjct: 219 YVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWEL 258
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 72 GESEFRNEMKIIGRIHHKNLVDLVG--FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSW 129
GE+ + E++++ R+ HKN++ LV + E +V E+ G L E+R
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 130 SERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKT---- 185
+ ++++GL YLH + I+H DIKP N+L+ KIS G+++ L
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 186 DQTRTYTVLRGTRGYTAPELHSRNNRIT-VKADVYSFGVMLLEIV 229
D RT +G+ + PE+ + + + K D++S GV L I
Sbjct: 166 DTCRTS---QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 41 IGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGE--SEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G V K C + +E AVK + K + + S E++++ ++ H N++ L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ S+ +V E G L + + + +R S + RI ++ G+ Y+H + I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 157 CDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
D+KP NIL++ K KI DFGLS + + + GT Y APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEV--LRGTYD 200
Query: 214 VKADVYSFGVML 225
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG----- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 12 EEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 69
Query: 73 ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q ++
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDK 125
Query: 133 RRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-- 188
I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 126 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ T + + APE + + + K+DV+SFGV++ E + ++ E+ +
Sbjct: 183 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 115/228 (50%), Gaps = 19/228 (8%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIK---IVEEGES 74
E+ K S + +++ L NF +G+G G+V G +E+ K++K ++++ +
Sbjct: 4 EDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV 63
Query: 75 EFRN-EMKIIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSER 132
E E +++ + + + C + +RL V E++ NG G+L++ +Q + E
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYV-NG--GDLMYHIQQVGKFKEP 120
Query: 133 RRI--ALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQT 188
+ + A EI GL +LH + II+ D+K N+++D KI+DFG+ K ++ T
Sbjct: 121 QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT 177
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVD 236
R + GT Y APE+ + D +++GV+L E++ + D
Sbjct: 178 REFC---GTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 246 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIK----IVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
+G+GG + Y+ KE+ K++ + + + E+ I + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
F + +V E R SL L R + ++ E R + ++G+ YLH+ R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKR-RKAVTEPEARYFMRQTIQGVQYLHN---NRVIH 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+K N+ +++ KI DFGL+ ++ D R L GT Y APE+ + + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD-LCGTPNYIAPEVLCKKGH-SFEV 223
Query: 217 DVYSFGVMLLEIVCCRKNVDES 238
D++S G +L ++ + + S
Sbjct: 224 DIWSLGCILYTLLVGKPPFETS 245
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 41 IGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGE--SEFRNEMKIIGRIHHKNLVDLVG 96
+G+G G V K C + +E AVK + K + + S E++++ ++ H N++ L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ S+ +V E G L + + + +R S + RI ++ G+ Y+H + I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 157 CDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT 213
D+KP NIL++ K KI DFGLS + + + GT Y APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEV--LRGTYD 200
Query: 214 VKADVYSFGVML 225
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 34 SENF--KEEIGRGGSGRVYKGCIN--GGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIH 87
S+N+ KEE+G+G V + C++ G E A K + K+ + E +I ++
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
H N+V L E S LV++ + G L + A + S ++ +I+E + Y H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCH 122
Query: 148 DECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
I+H ++KP N+L+ K K++DFGL+ ++ + + + GT GY +PE
Sbjct: 123 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE 177
Query: 205 LHSRNNRITVKADVYSFGVML 225
+ + + + D+++ GV+L
Sbjct: 178 V-LKKDPYSKPVDIWACGVIL 197
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 36 NFKEEIGRGGSGRVYKGCING------GKEIAVKKLIKIVEEGESE-FRNEMKIIGRI-H 87
+F + +G G G+V + G +AVK L E E +E+K++ + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR-------------- 133
H N+V+L+G C+ G L++ E+ G L N L R S+
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 134 ---RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT 190
+ ++ +G+ +L + IH D+ NIL+ KI DFGL++ +K D
Sbjct: 169 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS--N 223
Query: 191 YTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y V R + APE N T ++DV+S+G+ L E+
Sbjct: 224 YVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 200 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 69 VEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSL---GNLLFRAEQ 125
++ +F+NE++II I ++ + G + ++YE+M N S+ F ++
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 126 R----LSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK 181
+ + I ++ Y+H+E I H D+KP NILMD++ + K+SDFG S+
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 182 LLKTDQTRTYTVLRGTRGYTAPELHSRNNRIT-VKADVYSFGVML 225
+ + + RGT + PE S + K D++S G+ L
Sbjct: 201 YMVDKKIKG---SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 34 SENF--KEEIGRGGSGRVYKGCIN--GGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIH 87
S+N+ KEE+G+G V + C++ G E A K + K+ + E +I ++
Sbjct: 4 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
H N+V L E S LV++ + G L + A + S ++ +I+E + Y H
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCH 121
Query: 148 DECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
I+H ++KP N+L+ K K++DFGL+ ++ + + + GT GY +PE
Sbjct: 122 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE 176
Query: 205 LHSRNNRITVKADVYSFGVML 225
+ + + + D+++ GV+L
Sbjct: 177 V-LKKDPYSKPVDIWACGVIL 196
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 36 NFKEEIGRGGSGRVYKGCING------GKEIAVKKLIKIVEEGESE-FRNEMKIIGRI-H 87
+F + +G G G+V + G +AVK L E E +E+K++ + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR-------------- 133
H N+V+L+G C+ G L++ E+ G L N L R S+
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 134 ---RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT 190
+ ++ +G+ +L + IH D+ NIL+ KI DFGL++ +K D
Sbjct: 146 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS--N 200
Query: 191 YTVLRGTR---GYTAPELHSRNNRITVKADVYSFGVMLLEI 228
Y V R + APE N T ++DV+S+G+ L E+
Sbjct: 201 YVVKGNARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWEL 240
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 35 ENF--KEEIGRGGSGRVYKGCINGG--KEIAVKKLIKIVEEGE------SEFR----NEM 80
EN+ KE +GRG S V + CI+ KE AVK +I + G E R E+
Sbjct: 17 ENYEPKEILGRGVSS-VVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEV 74
Query: 81 KIIGRIH-HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEI 139
I+ ++ H N++ L + LV++ M+ G L + L + LS E R+I +
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRAL 133
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+E + LH + I+H D+KP NIL+D+ K++DFG S + D + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRSVCGTPS 188
Query: 200 YTAPE-----LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE ++ + + D++S GV++ ++
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 41 IGRGGSGRVYK----GCINGGKEIAVKKLIKIV----EEGESEFRNEMKIIGRIHHKNLV 92
+G+GG G+V++ N GK A+K L K + + + + E I+ + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECET 152
DL+ G L+ E++ G L L R + + +A EI L +LH +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLH---QK 140
Query: 153 RIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNN 210
II+ D+KP NI+++ K++DFGL K D T T+ GT Y APE + S +N
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC-GTIEYMAPEILMRSGHN 199
Query: 211 RITVKADVYSFGVMLLEIV 229
R D +S G ++ +++
Sbjct: 200 RAV---DWWSLGALMYDML 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKK--LIKIVEEG--ESEFR---NEMKIIGRI-HHKN 90
+ +GRG G+V + G + A + +K+++EG SE R +E+KI+ I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 LVDLVGFCSE-GSNRLLVYEFMRNGSLGNLLFRAEQR----------------LSWSERR 133
+V+L+G C++ G +++ EF + G+L L R+++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+ ++ +G+ +L + IH D+ NIL+ E KI DFGL++ + D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 194 -LRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEIVCCRKNVDESLRDDE 243
R + APE + +R+ T+++DV+SFGV+L EI + ++ DE
Sbjct: 200 DARLPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESE-FRNEMKIIGRIHHKNLV---DLV 95
IG G G V N K +A+KK+ + + E+KI+ H+N++ D++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 96 GFCS-EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
+ E + + + + L LL Q LS +I+ GL Y+H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIH---SANV 147
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT--YTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 148 LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 38 KEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRI-HHKNLVDLVG 96
KE IG G K C++ K ++ +K++++ + + E++I+ R H N++ L
Sbjct: 32 KETIGVGSYSEC-KRCVH--KATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+G + LV E MR G L + + R ++ S E + I + + YLH + ++H
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 157 CDIKPHNIL-MDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRI 212
D+KP NIL +DES +I DFG +K L+ + T T + APE+ R
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQG-Y 202
Query: 213 TVKADVYSFGVMLLEIVC 230
D++S G++L ++
Sbjct: 203 DEGCDIWSLGILLYTMLA 220
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 34 SENF--KEEIGRGGSGRVYKGCIN--GGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIH 87
S+N+ KEE+G+G V + C++ G E A K + K+ + E +I ++
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
H N+V L E S LV++ + G L + A + S ++ +I+E + Y H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCH 122
Query: 148 DECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
I+H ++KP N+L+ K K++DFGL+ ++ + + + GT GY +PE
Sbjct: 123 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE 177
Query: 205 LHSRNNRITVKADVYSFGVML 225
+ + + + D+++ GV+L
Sbjct: 178 V-LKKDPYSKPVDIWACGVIL 197
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 35 ENF--KEEIGRGGSGRVYKGCINGG--KEIAVKKLIKIVEEGE------SEFR----NEM 80
EN+ KE +GRG S V + CI+ KE AVK +I + G E R E+
Sbjct: 4 ENYEPKEILGRGVSS-VVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEV 61
Query: 81 KIIGRIH-HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEI 139
I+ ++ H N++ L + LV++ M+ G L + L + LS E R+I +
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRAL 120
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+E + LH + I+H D+KP NIL+D+ K++DFG S + D + GT
Sbjct: 121 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPS 175
Query: 200 YTAPE-----LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE ++ + + D++S GV++ ++
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLV-YEFMRN 113
+E A+K L K I++E + + E ++ R+ H V L FC + +L + +N
Sbjct: 63 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKN 121
Query: 114 GSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAK 173
G L + R + R EI+ L YLH + IIH D+KP NIL++E +
Sbjct: 122 GELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQ 177
Query: 174 ISDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
I+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 178 ITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 234
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 166
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DFGL++ D+ Y TR Y APE+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXGYV---ATRWYRAPEIMLNWMH 222
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 49/293 (16%)
Query: 37 FKEEIGRGGSGRVYKGCI----NGGKEIAVKKLIKIVEEG----ESEFRNEMKIIGRIHH 88
F E +G+G +++KG + G+ + L+K++++ F ++ ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
K+LV G C G +LV EF++ GSL L + + ++ + +A ++ +H+L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE- 130
Query: 149 ECETRIIHCDIKPHNILM--DESWKA------KISDFGLS-KLLKTDQTRTYTVLRGTRG 199
E +IH ++ NIL+ +E K K+SD G+S +L D +L+
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIP 182
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE--IVLIDWAHQ--CYE 255
+ PE + + D +SFG L EI C + S D + + + HQ +
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEI-CSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
A EL NL+++ C++ E + RP+ + +I + + P
Sbjct: 242 AAELANLINN------------------CMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
IG G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+M G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ K++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVE---EGESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI DF L++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 44/254 (17%)
Query: 12 SSPDVFEEIKLRSFSYE-QIVLASEN--FKEEIGRGGSGRVYKGCING------GKEIAV 62
SS + + + R + Y+ + EN F + +G G G+V G ++AV
Sbjct: 21 SSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAV 80
Query: 63 KKLIKIVEEGESE-FRNEMKIIGRI-HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL 120
K L + + E E +E+K++ ++ H+N+V+L+G C+ L++E+ G L N L
Sbjct: 81 KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
Query: 121 FRAEQRLS-----WSERRRI-----------------ALEIMEGLHYLHDECETRIIHCD 158
++ S + ++R+ A ++ +G+ +L + +H D
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197
Query: 159 IKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPELHSRNNRITV 214
+ N+L+ KI DFGL++ + +D V+RG + APE T+
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIMSDSN---YVVRGNARLPVKWMAPE-SLFEGIYTI 253
Query: 215 KADVYSFGVMLLEI 228
K+DV+S+G++L EI
Sbjct: 254 KSDVWSYGILLWEI 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
IG G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+M G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ K++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG----- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 356 EEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 413
Query: 73 ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q ++
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDK 469
Query: 133 RRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-- 188
I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 470 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ T + + APE + + + K+DV+SFGV++ E + ++ E+ +
Sbjct: 527 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 584
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 35 ENF--KEEIGRGGSGRVYKGCINGG--KEIAVKKLIKIVEEGE------SEFR----NEM 80
EN+ KE +GRG S V + CI+ KE AVK +I + G E R E+
Sbjct: 17 ENYEPKEILGRGVSS-VVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEV 74
Query: 81 KIIGRIH-HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEI 139
I+ ++ H N++ L + LV++ M+ G L + L + LS E R+I +
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRAL 133
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+E + LH + I+H D+KP NIL+D+ K++DFG S + D + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPS 188
Query: 200 YTAPE-----LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE ++ + + D++S GV++ ++
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 196
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG----- 72
EEI+ + ++ +L E+ +E+G G G V KG K + + + E
Sbjct: 357 EEIRPKEVYLDRKLLTLED--KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 414
Query: 73 ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSER 132
+ E E ++ ++ + +V ++G C E + +LV E G L L +Q ++
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDK 470
Query: 133 RRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT-- 188
I L ++ G+ YL E+ +H D+ N+L+ AKISDFGLSK L+ D+
Sbjct: 471 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 189 RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ T + + APE + + + K+DV+SFGV++ E + ++ E+ +
Sbjct: 528 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 585
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 26/189 (13%)
Query: 60 IAVKKLIK-IVEEGESEFRNEMKIIGRI-HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLG 117
+AVK L EE S+ +EM+++ I HKN+++L+G C++ ++ E+ G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 118 NLLFRA----------------EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKP 161
L RA E+++++ + ++ G+ YL + + IH D+
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 162 HNILMDESWKAKISDFGLSKLLKT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVY 219
N+L+ E+ KI+DFGL++ + D + T R + APE + +R+ T ++DV+
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVW 243
Query: 220 SFGVMLLEI 228
SFGV++ EI
Sbjct: 244 SFGVLMWEI 252
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDLVGF 97
IG G GR K +I V K + E+E +E+ ++ + H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 98 CSEGSNRLL--VYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR-- 153
+ +N L V E+ G L +++ + + + + L +M L EC R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE-FVLRVMTQLTLALKECHRRSD 132
Query: 154 ----IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
++H D+KP N+ +D K+ DFGL+++L D + T + GT Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPE---QM 188
Query: 210 NRITV--KADVYSFGVMLLEI 228
NR++ K+D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 40/235 (17%)
Query: 39 EEIGRGGSGR-VYKGCINGGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
++IG G G+ + G++ +K++ ++ + E R E+ ++ + H N+V
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 96 GFCSEGSNRLLVYEFMRNGSL-------GNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
E + +V ++ G L +LF+ +Q L W ++I L ++HD
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVHD 143
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
+I+H DIK NI + + ++ DFG++++L + + GT Y +PE+
Sbjct: 144 R---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEI-CE 198
Query: 209 NNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLV 263
N K+D+++ G +L E+ C K+ +EAG ++NLV
Sbjct: 199 NKPYNNKSDIWALGCVLYEL-CTLKH------------------AFEAGSMKNLV 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 152
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 209
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 210 ATDYTSSIDVWSAGCVLAELL 230
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEE------GESEFRNEMKIIGRIHHKNLV 92
+++G G G V + K V++ IKI+ + S+ E+ ++ + H N++
Sbjct: 43 KKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSE--RRRIALEIMEGLHYLHDEC 150
L F + N LV E + G L + + R+ ++E I +++ G+ YLH
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEII---HRMKFNEVDAAVIIKQVLSGVTYLH--- 153
Query: 151 ETRIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
+ I+H D+KP N+L++ K KI DFGLS + + + + GT Y APE+
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL--GTAYYIAPEVLR 211
Query: 208 RNNRITVKADVYSFGVMLL 226
+ + K DV+S GV+L
Sbjct: 212 K--KYDEKCDVWSIGVILF 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEXSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI FGL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL-VGFC 98
IG G G VY+ + + G+ +A+KK++ +G++ E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDECE 151
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---S 140
Query: 152 TRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFGA 197
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 198 TDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 197
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 198 TDYTSSIDVWSAGCVLAELL 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 167
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 224
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 225 ATDYTSSIDVWSAGCVLAELL 245
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 197
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 198 TDYTSSIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 144
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 201
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 202 ATDYTSSIDVWSAGCVLAELL 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 140
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 198
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 199 TDYTSSIDVWSAGCVLAELL 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL-VGFC 98
IG G G VY+ + + G+ +A+KK++ +G++ E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDECE 151
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---S 140
Query: 152 TRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFGA 197
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 198 TDYTSSIDVWSAGCVLAELL 217
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 40 EIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHH-KNLVDLVGFC 98
++GRG V++ E V K++K V++ ++ + E+KI+ + N++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENLRGGPNIITLADIV 101
Query: 99 SEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ +R LV+E + N L Q L+ + R EI++ L Y H I+H
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 157 CDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 216 ADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 213 LDMWSLGCMLASMI 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 49/293 (16%)
Query: 37 FKEEIGRGGSGRVYKGCI----NGGKEIAVKKLIKIVEEG----ESEFRNEMKIIGRIHH 88
F E +G+G +++KG + G+ + L+K++++ F ++ ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 89 KNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
K+LV G C G +LV EF++ GSL L + + ++ + +A ++ +H+L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLE- 130
Query: 149 ECETRIIHCDIKPHNILM--DESWKA------KISDFGLS-KLLKTDQTRTYTVLRGTRG 199
E +IH ++ NIL+ +E K K+SD G+S +L D +L+
Sbjct: 131 --ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIP 182
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDE--IVLIDWAHQ--CYE 255
+ PE + + D +SFG L EI C + S D + + + HQ +
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEI-CSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241
Query: 256 AGELQNLVSDQEDVNIEEFENLVKIGLWCVECELNLRPTMKQVIWMMEGIVPP 308
A EL NL+++ C++ E + RP+ + +I + + P
Sbjct: 242 AAELANLINN------------------CMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 158
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 216
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 217 TDYTSSIDVWSAGCVLAELL 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 147
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 205
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 206 TDYTSSIDVWSAGCVLAELL 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 40 EIGRGGSGRVYKGCING-----GKEIAVKKLIK-IVEEGESEFRNEMKIIGRIHHKNLVD 93
++G G G+V C + G+ +AVK L + + S ++ E++I+ ++H+++V
Sbjct: 16 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 94 LVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
G C + + LV E++ GSL + L R + ++ A +I EG+ YLH +
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRN 209
IH + N+L+D KI DFGL+K + G + APE +
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKE 189
Query: 210 NRITVKADVYSFGVMLLEIVC-CRKNVDESLRDDEIV 245
+ +DV+SFGV L E++ C N + E++
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 143
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 201
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 202 TDYTSSIDVWSAGCVLAELL 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 41 IGRGGSGRVYKGCINGGK-EIAVKKLIKIVEEGESEFR-NEMKIIGRIHHKNLVD----L 94
IG G G V + K +A+KK+ + + E++I+ R H+N++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
E + + + + L LL Q+LS +I+ GL Y+H +
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLL--KSQQLSNDHICYFLYQILRGLKYIH---SANV 165
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKT--DQTRTYTVLRGTRGYTAPELHSRNNRI 212
+H D+KP N+L++ + KI DFGL+++ D T T TR Y APE+ +
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 213 TVKADVYSFGVMLLEIVCCR 232
T D++S G +L E++ R
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 151
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 209
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 210 TDYTSSIDVWSAGCVLAELL 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 SENF--KEEIGRGGSGRVYKGCIN--GGKEIAVK--KLIKIVEEGESEFRNEMKIIGRIH 87
S+N+ KEE+G+G V + C++ G E A K K+ + E +I ++
Sbjct: 28 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 88 HKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
H N+V L E S LV++ + G L + A + S ++ +I+E + Y H
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCH 145
Query: 148 DECETRIIHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
I+H ++KP N+L+ K K++DFGL+ ++ + + + GT GY +PE
Sbjct: 146 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPE 200
Query: 205 LHSRNNRITVKADVYSFGVML 225
+ + + + D+++ GV+L
Sbjct: 201 V-LKKDPYSKPVDIWACGVIL 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 40 EIGRGGSGRVYKGCING-----GKEIAVKKLIK-IVEEGESEFRNEMKIIGRIHHKNLVD 93
++G G G+V C + G+ +AVK L + + S ++ E++I+ ++H+++V
Sbjct: 15 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 94 LVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
G C + + LV E++ GSL + L R + ++ A +I EG+ YLH +
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG--YTAPELHSRN 209
IH + N+L+D KI DFGL+K + G + APE +
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKE 188
Query: 210 NRITVKADVYSFGVMLLEIVC-CRKNVDESLRDDEIV 245
+ +DV+SFGV L E++ C N + E++
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 151
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 209
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 210 TDYTSSIDVWSAGCVLAELL 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI D GL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 175
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 232
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 233 ATDYTSSIDVWSAGCVLAELL 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 173
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 230
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 231 ATDYTSSIDVWSAGCVLAELL 251
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 83 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 139
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 177
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 234
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 235 ATDYTSSIDVWSAGCVLAELL 255
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 81 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 137
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 86 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 142
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG-----ESEFRNEMKIIGRIHHKNLVD 93
+E+G G G V KG K + + + E + E E ++ ++ + +V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECE 151
++G C E + +LV E G L L +Q ++ I L ++ G+ YL E
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---E 125
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT--RTYTVLRGTRGYTAPELHSRN 209
+ +H D+ N+L+ AKISDFGLSK L+ D+ + T + + APE +
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY- 184
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ + K+DV+SFGV++ E + ++ E+ +
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG-----ESEFRNEMKIIGRIHHKNLVD 93
+E+G G G V KG K + + + E + E E ++ ++ + +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECE 151
++G C E + +LV E G L L +Q ++ I L ++ G+ YL E
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT--RTYTVLRGTRGYTAPELHSRN 209
+ +H D+ N+L+ AKISDFGLSK L+ D+ + T + + APE +
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY- 188
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ + K+DV+SFGV++ E + ++ E+ +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL-VGFC 98
IG G G VY+ + + G+ +A+KK++ +G++ E++I+ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDECE 151
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---S 140
Query: 152 TRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNN 210
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGAT 198
Query: 211 RITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 199 DYTSSIDVWSAGCVLAELL 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 173
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I H DIKP N+L+D ++ K+ DFG +K L + + +R Y APEL
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGA 231
Query: 210 NRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 232 TDYTSSIDVWSAGCVLAELL 251
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG-----ESEFRNEMKIIGRIHHKNLVD 93
+E+G G G V KG K + + + E + E E ++ ++ + +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECE 151
++G C E + +LV E G L L +Q ++ I L ++ G+ YL E
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT--RTYTVLRGTRGYTAPELHSRN 209
+ +H D+ N+L+ AKISDFGLSK L+ D+ + T + + APE +
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY- 188
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ + K+DV+SFGV++ E + ++ E+ +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEG-----ESEFRNEMKIIGRIHHKNLVD 93
+E+G G G V KG K + + + E + E E ++ ++ + +V
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECE 151
++G C E + +LV E G L L +Q ++ I L ++ G+ YL E
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---E 123
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQT--RTYTVLRGTRGYTAPELHSRN 209
+ +H D+ N+L+ AKISDFGLSK L+ D+ + T + + APE +
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY- 182
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
+ + K+DV+SFGV++ E + ++ E+ +
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 41 IGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDL-VGF 97
IG G G VY+ + + G+ +A+KK+++ + F+N E++I+ ++ H N+V L F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 98 CSEGSNRLLVYEFMRNGSLGNLLFR-------AEQRLSWSERRRIALEIMEGLHYLHDEC 150
S G + VY + + ++R A+Q L + ++ L Y+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 218
Query: 151 ETRIIHCDIKPHNILMD-ESWKAKISDFGLSK-LLKTDQTRTYTVLRGTRGYTAPELHSR 208
I H DIKP N+L+D ++ K+ DFG +K L++ + +Y +R Y APEL
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELIFG 275
Query: 209 NNRITVKADVYSFGVMLLEIV 229
T DV+S G +L E++
Sbjct: 276 ATDYTSSIDVWSAGCVLAELL 296
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 CLLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R + + GT Y +PEL + + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKS-ASKSSDLWALGCIIYQLVA 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 140 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 196
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 41 IGRGGSGRVYKGCIN-GGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G+++A+KKL + + + +R E+ ++ + H+N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR--RIALEIMEGLHYLHDECETRI 154
+ S+ Y+F + L +SE + + ++++GL Y+H +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGV 147
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
+H D+KP N+ ++E + KI DFGL++ + T Y V TR Y APE+
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-GYVV---TRWYRAPEVILSWMHYNQ 203
Query: 215 KADVYSFGVMLLEIVCCR 232
D++S G ++ E++ +
Sbjct: 204 TVDIWSVGCIMAEMLTGK 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI D GL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIY 150
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+T L GT Y APE L N+
Sbjct: 151 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWT-LCGTPEYLAPEIILSKGYNK--- 203
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 204 AVDWWALGVLIYEMAA 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G +AVKKL + + + +R E++++ + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 97 FCS-----EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ E N + + + L N++ Q+L+ + + +I+ GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
IIH D+KP N+ ++E + KI D GL++ TD T V TR Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYV--ATRWYRAPEIMLNWMH 199
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++S G ++ E++ R + D++ LI
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 115 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 170
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R + + GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 171 TDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDLVGF 97
IG G GR K +I V K + E+E +E+ ++ + H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 98 CSEGSNRLL--VYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR-- 153
+ +N L V E+ G L +++ + + + + L +M L EC R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE-FVLRVMTQLTLALKECHRRSD 132
Query: 154 ----IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
++H D+KP N+ +D K+ DFGL+++L D T GT Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPE---QM 188
Query: 210 NRITV--KADVYSFGVMLLEI 228
NR++ K+D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 118
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 119 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 174
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R + + GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 175 TDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 39 EEIGRGGSGRVYKGC--INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVG 96
E +G G G+V+K C G ++A K + + + E +NE+ ++ ++ H NL+ L
Sbjct: 95 EILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
++ +LV E++ G L + + L+ + +I EG+ ++H + I+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILH 210
Query: 157 CDIKPHNILM--DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
D+KP NIL ++ + KI DFGL++ K + V GT + APE+ + + ++
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNY-DFVSF 267
Query: 215 KADVYSFGVM 224
D++S GV+
Sbjct: 268 PTDMWSVGVI 277
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+L+D+ +++DFG +K +K RT+T L GT Y APE + S+ V
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWT-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 -DWWALGVLIYEMAA 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ E E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFGL+K +K RT+ L GT Y APE + S+ V
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGLAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 -DWWALGVLIYEMAA 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN++ L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
IG G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ K++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 116 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 171
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 172 TDFGTAKVLSPESKQARA-NAFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 227
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPAFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ +I+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIV-EEGES-EFRNEMKIIGRIHHKNLVDLVG 96
+++G G VYKG + K I++ EEG E+ ++ + H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ LV+E++ + L L ++ + +++ GL Y H + +++H
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKA 216
D+KP N+L++E + K++DFGL++ K+ T+TY T Y P++ + + +
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 217 DVYSFGVMLLEIVCCRKNVDESLRDDEIVLI 247
D++ G + E+ R S ++++ I
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 42 GRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEG 101
RG G V+K + E K+ I ++ + E+ + + H+N++ +G G
Sbjct: 33 ARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 102 S----NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC------- 150
+ + L+ F GSL + L +SW+E IA + GL YLH++
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPELH--- 206
+ I H DIK N+L+ + A I+DFGL+ + ++ T + GTR Y APE+
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 207 -SRNNRITVKADVYSFGVMLLEIV 229
+ ++ D+Y+ G++L E+
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELA 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN++ L+G C++ ++ E+ G+L L RA
Sbjct: 94 MKMIGK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLV 95
E+IG G G V+K EI K +++ ++ E S E+ ++ + HKN+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
LV+EF + L L + ++++GL + H ++
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVL 123
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+KP N+L++ + + K++DFGL++ R Y+ T Y P++ +
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 216 ADVYSFGVMLLEIV 229
D++S G + E+
Sbjct: 183 IDMWSAGCIFAELA 196
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 115 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 170
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 171 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 36 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 95
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 96 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 151
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 152 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 116 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 171
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 172 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 40 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 99
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 100 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 155
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 156 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 211
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 116 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 171
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 172 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 118
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 119 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 174
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 175 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 33 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 92
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 93 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 148
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 149 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 204
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 39 EEIGRGGSGRVYKGC--INGGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
EE+G+G V + C I G+E A K + K+ + E +I + H N+V L
Sbjct: 10 EELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
SE LV++ + G L + A + S ++ +I+E +++ H I
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVNHCH---LNGI 124
Query: 155 IHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+H D+KP N+L+ K K++DFGL+ ++ DQ + + GT GY +PE+ R +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEV-LRKDP 182
Query: 212 ITVKADVYSFGVML 225
D+++ GV+L
Sbjct: 183 YGKPVDMWACGVIL 196
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 116 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 171
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 172 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 39 EEIGRGGSGRVYKGC--INGGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
EE+G+G V + C I G+E A K + K+ + E +I + H N+V L
Sbjct: 10 EELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
SE LV++ + G L + A + S ++ +I+E +++ H I
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVNHCH---LNGI 124
Query: 155 IHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+H D+KP N+L+ K K++DFGL+ ++ DQ + + GT GY +PE+ R +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEV-LRKDP 182
Query: 212 ITVKADVYSFGVML 225
D+++ GV+L
Sbjct: 183 YGKPVDMWACGVIL 196
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 35 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 94
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 95 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 150
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 151 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSAXK-SSDLWALGCIIYQLVA 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 34 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 93
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 94 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 149
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 150 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 61 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 120
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 121 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 176
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 177 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 41 IGRGGSGRVYKGCIN-GGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDLVG 96
+G G G V G+++A+KKL + + + +R E+ ++ + H+N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR--RIALEIMEGLHYLHDECETRI 154
+ S+ Y+F + + +SE + + ++++GL Y+H +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGV 165
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITV 214
+H D+KP N+ ++E + KI DFGL++ + T Y V TR Y APE+
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-GYVV---TRWYRAPEVILSWMHYNQ 221
Query: 215 KADVYSFGVMLLEIVCCR 232
D++S G ++ E++ +
Sbjct: 222 TVDIWSVGCIMAEMLTGK 239
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 KEIAVKKLIK--IVEEGESEF-RNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNG 114
+E A+K L K I++E + + E ++ R+ H V L + + +NG
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 115 SLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKI 174
L + R + R EI+ L YLH + IIH D+KP NIL++E +I
Sbjct: 118 ELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 173
Query: 175 SDFGLSKLL--KTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVC 230
+DFG +K+L ++ Q R GT Y +PEL + + +D+++ G ++ ++V
Sbjct: 174 TDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTEKSACK-SSDLWALGCIIYQLVA 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 32 LASENFKE--EIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGES-EFRNEMKIIGRIH 87
+E+ K+ EIGRG G V K G+ +AVK++ V+E E + ++ ++ R
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 88 H-KNLVDLVGFCSEGSNRLLVYEFMRNG--SLGNLLFRAEQRLSWSE-RRRIALEIMEGL 143
+V G + + E M ++ + E +I L ++ L
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
++L + +IIH DIKP NIL+D S K+ DFG+S L +T G R Y AP
Sbjct: 139 NHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAP 194
Query: 204 E---LHSRNNRITVKADVYSFGVMLLEIVCCR 232
E + V++DV+S G+ L E+ R
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 121
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDES---WKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 176
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 177 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE---FRNEMKIIGRIHHKNLVDLVGF 97
IG G GR K +I V K + E+E +E+ ++ + H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 98 CSEGSNRLL--VYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETR-- 153
+ +N L V E+ G L +++ + + + + L +M L EC R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE-FVLRVMTQLTLALKECHRRSD 132
Query: 154 ----IIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
++H D+KP N+ +D K+ DFGL+++L D+ + GT Y +PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPE---QM 188
Query: 210 NRITV--KADVYSFGVMLLEI 228
NR++ K+D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LXGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 233
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNILMDE----SWKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI++ + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 121
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDES---WKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 176
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 177 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDES---WKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LAGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDES---WKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
E+IG+G V + C+ G E A K + K+ + E +I + H N+V L
Sbjct: 10 EDIGKGAFS-VVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
SE LV++ + G L + A + S ++ +I+E + + H + +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCH---QMGV 124
Query: 155 IHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+H D+KP N+L+ K K++DFGL+ ++ DQ + + GT GY +PE+ R
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEV-LRKEA 182
Query: 212 ITVKADVYSFGVML 225
D+++ GV+L
Sbjct: 183 YGKPVDIWACGVIL 196
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ E E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+++D+ +++DFGL+K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGLAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNY-EPLGLEADMWSIGVI 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
EE+G+G V + C+ G+E A K + K+ + E +I + H N+V L
Sbjct: 28 EELGKGAFS-VVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
SE + L+++ + G L + A + S ++ +I+E + + H + +
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCH---QMGV 142
Query: 155 IHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+H D+KP N+L+ K K++DFGL+ ++ +Q + + GT GY +PE+ R +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEV-LRKDP 200
Query: 212 ITVKADVYSFGVML 225
D+++ GV+L
Sbjct: 201 YGKPVDLWACGVIL 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 5 KIISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKK 64
K++ +PD+ R F+ + + +G+G G VY I K
Sbjct: 4 KVMENSSGTPDILT----RHFTIDDFEIG-----RPLGKGKFGNVYLAREKKSHFIVALK 54
Query: 65 LI---KIVEEG-ESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL 120
++ +I +EG E + R E++I +HH N++ L + + L+ E+ G L L
Sbjct: 55 VLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
Query: 121 FRAEQRLSWSERRRIAL--EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFG 178
++ ++ E+R + E+ + L Y H + ++IH DIKP N+L+ + KI+DFG
Sbjct: 115 ---QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG 168
Query: 179 LSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKNVDES 238
S + + +T + GT Y PE+ K D++ GV+ E++ + +
Sbjct: 169 WSVHAPSLRRKT---MCGTLDYLPPEM-IEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
Query: 239 LRDD---EIVLIDWAHQCYEAGELQNLVS 264
++ IV +D Q+L+S
Sbjct: 225 SHNETYRRIVKVDLKFPASVPTGAQDLIS 253
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ + G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVAYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 135
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+DE +++DFG +K +K RT+ L GT
Sbjct: 136 QIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK---GRTWX-LCGT 188
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 189 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDESW---KAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 16/195 (8%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVKKLIKIV--EEGESEFRNEMKIIGRIHH-KNLVD 93
+E+GRG V + CI+ G+E A K L K ++ +E +E+ ++ +++
Sbjct: 35 KELGRGKFA-VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 94 LVGFCSEGSNRLLVYEFMRNGSLGNL-LFRAEQRLSWSERRRIALEIMEGLHYLHDECET 152
L S +L+ E+ G + +L L + +S ++ R+ +I+EG++YLH +
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QN 150
Query: 153 RIIHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
I+H D+KP NIL+ + KI DFG+S+ K + GT Y APE+ +
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPEILNY- 207
Query: 210 NRITVKADVYSFGVM 224
+ IT D+++ G++
Sbjct: 208 DPITTATDMWNIGII 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLI---KIVEEGESEFRNEMKIIGRIHHKNLVDLV 95
EE+G+G V + + K+I K+ + E +I + H N+V L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
SE LV++ + G L + A + S ++ +I+E ++++H + I+
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIHQILESVNHIH---QHDIV 152
Query: 156 HCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRI 212
H D+KP N+L+ K K++DFGL+ ++ +Q + + GT GY +PE+ R +
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEV-LRKDPY 210
Query: 213 TVKADVYSFGVML 225
D+++ GV+L
Sbjct: 211 GKPVDIWACGVIL 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 79 EMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
E+ I+ I H N++ L ++ +L+ E + G L + L E L+ E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQ 122
Query: 139 IMEGLHYLHDECETRIIHCDIKPHNI-LMDES---WKAKISDFGLSKLLKTDQTRTYTVL 194
I+ G++YLH +I H D+KP NI L+D + + KI DFGL+ K D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNI 177
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVM 224
GT + APE+ + + ++AD++S GV+
Sbjct: 178 FGTPEFVAPEIVNYEP-LGLEADMWSIGVI 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 48/263 (18%)
Query: 39 EEIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH-HKNLVDLVG 96
E +G G +V + GKE AVK + K S E++ + + +KN+++L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERR--RIALEIMEGLHYLHDECETRI 154
F + + LV+E ++ GS +L +++ ++ER R+ ++ L +LH + I
Sbjct: 79 FFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GI 132
Query: 155 IHCDIKPHNILMDESWK---AKISDFGLSKLLKTDQTRT------YTVLRGTRGYTAPE- 204
H D+KP NIL + K KI DF L +K + + T T G+ Y APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 205 ---LHSRNNRITVKADVYSFGVMLLEI---------------------VC--CRKNVDES 238
+ + D++S GV+L + VC C+ + ES
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 252
Query: 239 LRDD--EIVLIDWAHQCYEAGEL 259
+++ E DWAH EA +L
Sbjct: 253 IQEGKYEFPDKDWAHISSEAKDL 275
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 26/167 (15%)
Query: 80 MKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRA---------------- 123
MK+IG+ HKN+++L+G C++ ++ + G+L L RA
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVGYASKGNLREYL-RARRPPGMEYSYDINRVP 150
Query: 124 EQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLL 183
E+++++ + ++ G+ YL + + IH D+ N+L+ E+ KI+DFGL++ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 184 KT-DQTRTYTVLRGTRGYTAPELHSRNNRI-TVKADVYSFGVMLLEI 228
D + T R + APE + +R+ T ++DV+SFGV++ EI
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 73
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 74 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 186
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQRVSSECQHLIR-- 241
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 242 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 269
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+IA+ I++ L +LH + +IH D+KP N+L++ + K+ DFG+S L + T+
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TI 212
Query: 194 LRGTRGYTAPE-LHSRNNR--ITVKADVYSFGVMLLEIVCCRKNVD 236
G + Y APE ++ N+ +VK+D++S G+ ++E+ R D
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+IA+ I++ L +LH + +IH D+KP N+L++ + K+ DFG+S L D + +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK--DI 168
Query: 194 LRGTRGYTAPE-LHSRNNR--ITVKADVYSFGVMLLEIVCCRKNVD 236
G + Y APE ++ N+ +VK+D++S G+ ++E+ R D
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 29 QIVLASENFK--EEIGRGGSGRVYKGCINGGKEI----AVKKLIKIVEEGESEFRNEMKI 82
QI L E+F+ + +G+G G+V+ + A+KK + ++++ E ++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 83 IGRI-HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEI 139
+ H L + N V E++ NG G+L++ + + S A EI
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYL-NG--GDLMYHIQSCHKFDLSRATFYAAEI 128
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGT 197
+ GL +LH + I++ D+K NIL+D+ KI+DFG+ K +L +T + GT
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC---GT 182
Query: 198 RGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
Y APE+ + D +SFGV+L E++
Sbjct: 183 PDYIAPEI-LLGQKYNHSVDWWSFGVLLYEML 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 94 LVGF--CSEGSNRLLVYEFMRNGSLGNLLF--RAEQRLSWSERRRIALEIMEGLHYLHDE 149
LVG C + +RL NG G+L+F + +++L R + EI L+YLH
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-- 170
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGTRGYTAPELHS 207
E II+ D+K N+L+D K++D+G+ K L D T T+ GT Y APE+
Sbjct: 171 -ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEI-L 225
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVD 236
R D ++ GV++ E++ R D
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLVGF----CSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEY 97
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NI++ +
Sbjct: 98 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN 153
Query: 171 KAKISDFGLSKLLKTDQ---TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + T+T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 211
Query: 228 IVCCRKNVDESLRDDEIVLIDWAH 251
++ + D V + + H
Sbjct: 212 VLTG----EPPFTGDSPVSVAYQH 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVKKLIKIVEEGES------EFRNEMKIIGRIHHKN 90
E IG+G V + CIN G++ AVK ++ + + S + + E I + H +
Sbjct: 30 EVIGKGAFS-VVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSL-GNLLFRAEQRLSWSER--RRIALEIMEGLHYLH 147
+V+L+ S +V+EFM L ++ RA+ +SE +I+E L Y H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 148 DECETRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAP 203
D IIH D+KP N+L+ + S K+ DFG++ ++ ++ R GT + AP
Sbjct: 148 D---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAP 202
Query: 204 ELHSRNNRITVKADVYSFGVMLL 226
E+ R DV+ GV+L
Sbjct: 203 EVVKREP-YGKPVDVWGCGVILF 224
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 --DWWALGVLIYEMAA 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 41 IGRGGSGRV---YKGCINGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDL 94
+G G G V Y + +++AVKKL + + +R E++++ + H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 95 VGFCSEG------SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+ + S LV M L N++ Q LS + + +++ GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
IIH D+KP N+ ++E + +I DFGL++ + D+ T V TR Y APE+
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 202
Query: 209 NNRITVKADVYSFGVMLLEIV 229
D++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 29 QIVLASENF--KEEIGRGGSGRVYKGCINGGKEI----AVKKLIKIVEEGESEFRNEMKI 82
QI L E+F + +G+G G+V+ + A+KK + ++++ E ++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 83 IGRI-HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAE--QRLSWSERRRIALEI 139
+ H L + N V E++ NG G+L++ + + S A EI
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYL-NG--GDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGT 197
+ GL +LH + I++ D+K NIL+D+ KI+DFG+ K +L +T + GT
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GT 181
Query: 198 RGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
Y APE+ + D +SFGV+L E++
Sbjct: 182 PDYIAPEI-LLGQKYNHSVDWWSFGVLLYEML 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKI--IGRIHHKNLVDLV- 95
E IGRG G VYKG ++ + +AVK F NE I + + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDE-RPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 96 ---GFCSEGS-NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH---- 147
++G LLV E+ NGSL L + W R+A + GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 148 --DECETRIIHCDIKPHNILMDESWKAKISDFGLS------KLLKTDQTRTYTVLR-GTR 198
D + I H D+ N+L+ ISDFGLS +L++ + + GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 199 GYTAPE-----LHSRNNRITVK-ADVYSFGVMLLEI 228
Y APE ++ R+ +K D+Y+ G++ EI
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 72
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 73 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 132 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 185
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 240
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 241 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 268
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 -DWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 73
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 74 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 186
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 241
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 242 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 269
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 87
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 88 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 147 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 200
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 255
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 256 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 283
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGE---SEFRNEMKIIGRIHHKNLVDLV 95
E+IG G G V+K EI K +++ ++ E S E+ ++ + HKN+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
LV+EF + L L + ++++GL + H ++
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVL 123
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
H D+KP N+L++ + + K+++FGL++ R Y+ T Y P++ +
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 216 ADVYSFGVMLLEIV 229
D++S G + E+
Sbjct: 183 IDMWSAGCIFAELA 196
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 234
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 73
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 74 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 186
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQRVSSECQHLIR-- 241
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 242 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 269
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 41 IGRGGSGRVYKGCINGGKEI--AVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
IGRG G V K + G I A KK+ K E F+ E++I+ + H N++ L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
+ ++ LV E G L + ++ S+ RI +++ + Y H + + H D
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRD 131
Query: 159 IKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
+KP N L K+ DFGL+ K + V GT Y +P++ +
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQV--LEGLYGPE 187
Query: 216 ADVYSFGVMLLEIVC 230
D +S GVM+ ++C
Sbjct: 188 CDEWSAGVMMYVLLC 202
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 71
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 72 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 131 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 184
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 239
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 240 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 267
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 88
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 89 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 148 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 201
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 256
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 257 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 284
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 40 EIGRGGSGRVYKGCI-NGGKEIAVKKLIKIVEEGESE-FRNEMKIIGRIHH-KNLVDLVG 96
E+G G G+V+K G IAVK++ + + E++ ++ ++ + H +V G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI----ALEIMEGLHYLHDECET 152
++ + E M G + ++R+ RI + I++ L+YL ++
Sbjct: 92 TFITNTDVFIAMELM-----GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--H 144
Query: 153 RIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE----LHSR 208
+IH D+KP NIL+DE + K+ DFG+S L D+ + + G Y APE
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPT 202
Query: 209 NNRITVKADVYSFGVMLLEIV 229
++ADV+S G+ L+E+
Sbjct: 203 KPDYDIRADVWSLGISLVELA 223
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E+ G + + L R R S R A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+++D+ K++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 141
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 142 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 194
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 195 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 100
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 101 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 160 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 268
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 269 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 296
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIGRIHHKNLVDLVGF 97
++IG+G G V+ G G K +AVK + E S FR E+ + H+N++ +
Sbjct: 43 KQIGKGRYGEVWMGKWRGEK-VAVK--VFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 98 CSEGSNR----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC--- 150
+G+ L+ ++ NGSL + L L ++A + GL +LH E
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 151 --ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRT---YTVLRGTRGYTAPE- 204
+ I H D+K NIL+ ++ I+D GL+ +D GT+ Y PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 205 ----LHSRNNRITVKADVYSFGVMLLEIV 229
L+ + + + AD+YSFG++L E+
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKL-IKIVEEG-ESEFRNEMKIIGRIH---HKNLVD 93
EIG G G VYK + G +A+K + + EEG E+ ++ R+ H N+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 94 LVGFCSEG-SNR----LLVYEFMRNGSLGNLLFRAEQR-LSWSERRRIALEIMEGLHYLH 147
L+ C+ ++R LV+E + + L L +A L + + + + GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
C I+H D+KP NIL+ K++DFGL+++ V+ T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVLL 184
Query: 208 RNNRITVKADVYSFGVMLLEI 228
++ T D++S G + E+
Sbjct: 185 QSTYAT-PVDMWSVGCIFAEM 204
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 68
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 69 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 128 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 181
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 236
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 237 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAA 169
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 222
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 223 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 254
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 41 IGRGGSGRVYKGCINGGKEI--AVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFC 98
IGRG G V K + G I A KK+ K E F+ E++I+ + H N++ L
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 99 SEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCD 158
+ ++ LV E G L + ++ S+ RI +++ + Y H + + H D
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRD 148
Query: 159 IKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVK 215
+KP N L K+ DFGL+ K + V GT Y +P++ +
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQV--LEGLYGPE 204
Query: 216 ADVYSFGVMLLEIVC 230
D +S GVM+ ++C
Sbjct: 205 CDEWSAGVMMYVLLC 219
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRN---EMKIIGRIHHKNLVDLV 95
EIG G G VY + + +A+KK+ ++ ++++ E++ + ++ H N +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G LV E+ GS +LL ++ L E + ++GL YLH +I
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 137
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRIT 213
H D+K NIL+ E K+ DFG + ++ GT + APE L +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPEVILAMDEGQYD 192
Query: 214 VKADVYSFGVMLLEIV 229
K DV+S G+ +E+
Sbjct: 193 GKVDVWSLGITCIELA 208
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 27 YEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRI 86
YE+ ++A E++GRG G V++ K+ + K +K+ + + E+ I+
Sbjct: 4 YEKYMIA-----EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA 58
Query: 87 HHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYL 146
H+N++ L ++++EF+ + + + L+ E ++ E L +L
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 147 HDECETRIIHCDIKPHNILMD--ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
H I H DI+P NI+ S KI +FG ++ LK + +L Y APE
Sbjct: 119 HSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--NFRLLFTAPEYYAPE 173
Query: 205 LHSRNNRITVKADVYSFGVML 225
+H +++ ++ D++S G ++
Sbjct: 174 VH-QHDVVSTATDMWSLGTLV 193
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 68
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 69 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 128 NXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 181
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 236
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 237 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 115
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 116 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 175 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 228
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 283
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 284 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 311
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 72
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 73 SGVIRLLDW-FERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 132 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 185
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 240
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 241 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 268
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLV----GFCSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NI++ +
Sbjct: 98 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN 153
Query: 171 KAKISDFGLSKLLKTDQ---TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + T+T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 211
Query: 228 IVC 230
++
Sbjct: 212 VLT 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLV----GFCSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NI++ +
Sbjct: 98 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN 153
Query: 171 KAKISDFGLSKLLKTDQ---TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + T+T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 211
Query: 228 IVC 230
++
Sbjct: 212 VLT 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLVGF----CSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NI++ +
Sbjct: 98 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN 153
Query: 171 KAKISDFGLSKLLKTDQ---TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + T+T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 211
Query: 228 IVC 230
++
Sbjct: 212 VLT 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAA 169
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K T+T L GT
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GATWT-LCGT 222
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 223 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 254
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 107
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 108 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 167 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 220
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSSECQHLIR-- 275
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 276 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 303
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C +I K+ I E++ E++I+ +++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 78 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 132
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 190
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 191 VGTAGYNR---AVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C +I K+ I E++ E++I+ +++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 78 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 132
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 190
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 191 VGTAGYNR---AVDCWSLGVILF 210
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKLIKIVEEGESEFRN---EMKIIGRIHHKNLVDLV 95
EIG G G VY + + +A+KK+ ++ ++++ E++ + ++ H N +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G LV E+ GS +LL ++ L E + ++GL YLH +I
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 176
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRIT 213
H D+K NIL+ E K+ DFG + ++ GT + APE L +
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPEVILAMDEGQYD 231
Query: 214 VKADVYSFGVMLLEIV 229
K DV+S G+ +E+
Sbjct: 232 GKVDVWSLGITCIELA 247
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 87
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 88 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 147 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 200
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 255
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 256 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 283
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C +I K+ I E++ E++I+ +++H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 77 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 131
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 189
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 190 VGTAGYNR---AVDCWSLGVILF 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLV----GFCSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 55 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 114
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NI++ +
Sbjct: 115 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN 170
Query: 171 KAKISDFGLSKLLKTDQ---TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + T+T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 171 AVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 228
Query: 228 IVC 230
++
Sbjct: 229 VLT 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 88
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 89 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 148 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 201
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 256
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 257 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C +I K+ I E++ E++I+ +++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 78 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 132
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 190
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 191 VGTAGYNR---AVDCWSLGVILF 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAV-----KKLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK ++V K + E +F E+ + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 192 TRT--FSHASDTWMFGVTLWEM 211
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 101
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 102 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 161 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 214
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSSECQHLIR-- 269
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 270 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 297
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 100
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 101 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 160 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSSECQHLIR-- 268
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 269 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 296
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAV-----KKLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK ++V K + E +F E+ + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 188 TRT--FSHASDTWMFGVTLWEM 207
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 95
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 96 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 155 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 208
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 263
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 264 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 291
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R + R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C +I K+ I E++ E++I+ +++H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 84 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 138
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 196
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 197 VGTAGYNR---AVDCWSLGVILF 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 68
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 69 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 128 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 181
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSSECQHLIR-- 236
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 237 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 100
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 101 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 160 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSSECQHLIR-- 268
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 269 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 296
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 101
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 102 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 161 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 214
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSSECQHLIR-- 269
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 270 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 297
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKL-IKIVEEG-ESEFRNEMKIIGRIH---HKNLVD 93
EIG G G VYK + G +A+K + + EEG E+ ++ R+ H N+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 94 LVGFCSEG-SNR----LLVYEFMRNGSLGNLLFRAEQR-LSWSERRRIALEIMEGLHYLH 147
L+ C+ ++R LV+E + + L L +A L + + + + GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
C I+H D+KP NIL+ K++DFGL+++ V+ T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVLL 184
Query: 208 RNNRITVKADVYSFGVMLLEI 228
++ T D++S G + E+
Sbjct: 185 QSTYAT-PVDMWSVGCIFAEM 204
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 115
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 116 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 175 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 228
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 283
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 284 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 311
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ ++
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYQMAA 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I ++ LV L + SN +V E+ G + + L R R S R A
Sbjct: 91 NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-RRIGRFSEPHARFYAA 149
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ K++DFG +K +K RT+ L GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWX-LCGT 202
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 203 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 60/230 (26%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL-----------IKIVEEGESEFRNEMKIIGRIHH 88
+G G SG V ++G G + +AVK++ IK++ E + H
Sbjct: 23 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIKLLTESDD-------------H 68
Query: 89 KNLVDLVGFCSEGSNRLLVYEF-MRNGSLGNLL----FRAEQRLSWSERRRIAL--EIME 141
N++ +CSE ++R L + N +L +L+ E E I+L +I
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 142 GLHYLHDECETRIIHCDIKPHNILMD-------------ESWKAKISDFGLSKLLKTDQT 188
G+ +LH +IIH D+KP NIL+ E+ + ISDFGL K L + Q+
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 189 RTYTVLR---GTRGYTAPELHSRNN------RITVKADVYSFGVMLLEIV 229
T L GT G+ APEL +N R+T D++S G + I+
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAV-----KKLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK ++V K + E +F E+ + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 198 TRT--FSHASDTWMFGVTLWEM 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN--EMKIIGRIHHKNLVDL 94
K +G G G V EI K I+ ++ R E+KI+ H+N++ +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 95 VGF----CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
E N + + + + L ++ + Q LS + + + + LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---------KTDQTRTYTVLRGTRGYT 201
+ +IH D+KP N+L++ + K+ DFGL++++ T Q T TR Y
Sbjct: 131 -SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 202 APELHSRNNRITVKADVYSFGVMLLEIVCCRK 233
APE+ + + + DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 41 IGRGGSGRV---YKGCINGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDL 94
+G G G V Y + +++AVKKL + + +R E++++ + H+N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 95 VGFCSEG------SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+ + S LV M L N++ Q LS + + +++ GL Y+H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
IIH D+KP N+ ++E + +I DFGL++ + D+ T V TR Y APE+
Sbjct: 142 ---AGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 194
Query: 209 NNRITVKADVYSFGVMLLEIV 229
D++S G ++ E++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 120
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 121 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 180 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 233
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 288
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 289 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 316
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+++D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIIISKGYNKAV--DWWALGVLIYEMAA 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GK--EIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK +AVK L V E +F E+ + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 188 TRT--FSHASDTWMFGVTLWEM 207
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN--EMKIIGRIHHKNLVDL 94
K +G G G V EI K I+ ++ R E+KI+ H+N++ +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 95 VGF----CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
E N + + + + L ++ + Q LS + + + + LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---------KTDQTRTYTVLRGTRGYT 201
+ +IH D+KP N+L++ + K+ DFGL++++ T Q T TR Y
Sbjct: 131 -SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 202 APELHSRNNRITVKADVYSFGVMLLEIVCCRK 233
APE+ + + + DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ +++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 -DWWALGVLIYEMAA 233
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 40 EIGRGGSGRVYKG-CINGGKEIAVKKL-IKIVEEG-ESEFRNEMKIIGRIH---HKNLVD 93
EIG G G VYK + G +A+K + + EEG E+ ++ R+ H N+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 94 LVGFCSEG-SNR----LLVYEFMRNGSLGNLLFRAEQR-LSWSERRRIALEIMEGLHYLH 147
L+ C+ ++R LV+E + + L L +A L + + + + GL +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 148 DECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
C I+H D+KP NIL+ K++DFGL+++ V+ T Y APE+
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLL 184
Query: 208 RNNRITVKADVYSFGVMLLEI 228
++ T D++S G + E+
Sbjct: 185 QSTYAT-PVDMWSVGCIFAEM 204
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 101
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 102 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 161 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 214
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSXECQHLIR-- 269
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 270 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 297
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 100
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 101 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 160 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 213
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSXECQHLIR-- 268
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 269 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 296
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GK--EIAVKKLIKIV---EEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK +AVK L V E +F E+ + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 188 TRT--FSHASDTWMFGVTLWEM 207
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 101
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 102 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 161 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 214
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIGGQVFFRQRVSXECQHLIR-- 269
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ + RPT +++ WM + ++P
Sbjct: 270 ----------------WCLALRPSDRPTFEEIQNHPWMQDVLLP 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 -DWWALGVLIYEMAA 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 6 IISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKL 65
+SR + + ++++++ YE + + IGRG G V +++ KL
Sbjct: 50 FLSRYKDTINKIRDLRMKAEDYEVVKV--------IGRGAFGEVQLVRHKSTRKVYAMKL 101
Query: 66 I---KIVEEGESEFR-NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLF 121
+ ++++ +S F E I+ + +V L + +V E+M G L NL+
Sbjct: 102 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 161
Query: 122 RAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS- 180
+ W+ R E++ L +H IH D+KP N+L+D+S K++DFG
Sbjct: 162 NYDVPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216
Query: 181 KLLKTDQTRTYTVLRGTRGYTAPEL---HSRNNRITVKADVYSFGVMLLEIVC 230
K+ K R T + GT Y +PE+ + + D +S GV L E++
Sbjct: 217 KMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C I K+ I E++ E++I+ +++H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 217 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 271
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 329
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 330 VGTAGYNR---AVDCWSLGVILF 349
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R S R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 -DWWALGVLIYEMAA 234
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAV-----KKLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK ++V K + E +F E+ + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 192 TRT--FSHASDTWMFGVTLWEM 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 39 EEIGRGGSGRVYKGCING--GKEIAV-----KKLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E++G G G V +G + GK ++V K + E +F E+ + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ L G ++ V E GSL + L + + R A+++ EG+ YL +
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTR----GYTAPE-LH 206
R IH D+ N+L+ KI DFGL + L Q + V++ R + APE L
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 207 SRNNRITVKADVYSFGVMLLEI 228
+R + +D + FGV L E+
Sbjct: 198 TRT--FSHASDTWMFGVTLWEM 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 48/284 (16%)
Query: 41 IGRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCS 99
+G GG G VY G ++ +A+K + K E N ++ + L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSGF 88
Query: 100 EGSNRLLVYEFMRNGSLGNLLFRAE----------QRLSWSER--RRIALEIMEGLHYLH 147
G RLL + F R S +L R E +R + E R +++E + + H
Sbjct: 89 SGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ ++H DIK NIL+D + K+ DFG LLK YT GTR Y+ PE
Sbjct: 148 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 201
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQNLVSDQ 266
+ A V+S G++L ++VC + D+EI+ + + E Q+L+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DEEIIRGQVFFRQRVSXECQHLIR-- 256
Query: 267 EDVNIEEFENLVKIGLWCVECELNLRPTMKQV---IWMMEGIVP 307
WC+ RPT +++ WM + ++P
Sbjct: 257 ----------------WCLALRPXDRPTFEEIQNHPWMQDVLLP 284
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 41 IGRGGSGRVY-----KGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRIHHKNL 91
+G G G V K C I K+ I E++ E++I+ +++H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
+ + F + + +V E M G L + + +RL + + +++ + YLH E
Sbjct: 203 IKIKNFF-DAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---E 257
Query: 152 TRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL--- 205
IIH D+KP N+L+ +E KI+DFG SK+L +T L GT Y APE+
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVS 315
Query: 206 --HSRNNRITVKADVYSFGVMLL 226
+ NR D +S GV+L
Sbjct: 316 VGTAGYNR---AVDCWSLGVILF 335
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 6 IISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKL 65
+SR + + ++++++ YE + + IGRG G V +++ KL
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKV--------IGRGAFGEVQLVRHKSTRKVYAMKL 106
Query: 66 I---KIVEEGESEFR-NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLF 121
+ ++++ +S F E I+ + +V L + +V E+M G L NL+
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 122 RAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS- 180
+ W+ R E++ L +H IH D+KP N+L+D+S K++DFG
Sbjct: 167 NYDVPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 181 KLLKTDQTRTYTVLRGTRGYTAPEL---HSRNNRITVKADVYSFGVMLLEIVC 230
K+ K R T + GT Y +PE+ + + D +S GV L E++
Sbjct: 222 KMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 6 IISRQVSSPDVFEEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKL 65
+SR + + ++++++ YE + + IGRG G V +++ KL
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKV--------IGRGAFGEVQLVRHKSTRKVYAMKL 106
Query: 66 I---KIVEEGESEFR-NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLF 121
+ ++++ +S F E I+ + +V L + +V E+M G L NL+
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 122 RAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS- 180
+ W+ R E++ L +H IH D+KP N+L+D+S K++DFG
Sbjct: 167 NYDVPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 181 KLLKTDQTRTYTVLRGTRGYTAPEL---HSRNNRITVKADVYSFGVMLLEIVC 230
K+ K R T + GT Y +PE+ + + D +S GV L E++
Sbjct: 222 KMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
+G+G + V++G G A+K I + + + R E +++ +++HKN+V L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLFAI 75
Query: 98 CSEGSNR--LLVYEFMRNGSLGNLLFRAEQR--LSWSERRRIALEIMEGLHYLHDECETR 153
E + R +L+ EF GSL +L L SE + +++ G+++L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 154 IIHCDIKPHNILM----DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR- 208
I+H +IKP NI+ D K++DFG ++ L+ D+ + L GT Y P+++ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERA 190
Query: 209 ------NNRITVKADVYSFGVML 225
+ D++S GV
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 41 IGRGGSGRV---YKGCINGGKEIAVKKLIKIVEE---GESEFRNEMKIIGRIHHKNLVDL 94
+G G G V Y + +++AVKKL + + +R E++++ + H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 95 VGFCSEG------SNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
+ + S LV M L N++ Q LS + + +++ GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 149 ECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
IIH D+KP N+ ++E + +I DFGL++ + D+ T V TR Y APE+
Sbjct: 150 ---AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 202
Query: 209 NNRITVKADVYSFGVMLLEIV 229
D++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 42 GRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEG 101
RG G V+K + + K+ + ++ + E+ + H+NL+ + G
Sbjct: 24 ARGRFGCVWKAQLM--NDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 102 SNR----LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC------- 150
SN L+ F GSL + L ++W+E +A + GL YLH++
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 151 -ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPELH-- 206
+ I H D K N+L+ A ++DFGL+ + + T + GTR Y APE+
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 207 --SRNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVL 246
+ ++ D+Y+ G++L E+V K D + DE +L
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPV--DEYML 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 --DWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 58 KEIAVKKLIKIVEEGES---EFRNEMKIIGRIHHKNLVDLV----GFCSEGSNRLLVYEF 110
+++AVK L + S FR E + ++H +V + G +V E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 111 MRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESW 170
+ +L +++ E ++ + + + L++ H + IIH D+KP NIL+ +
Sbjct: 98 VDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATN 153
Query: 171 KAKISDFGLSKLLKTDQT---RTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLE 227
K+ DFG+++ + +T V+ GT Y +PE +R + + ++DVYS G +L E
Sbjct: 154 AVKVVDFGIARAIADSGNSVXQTAAVI-GTAQYLSPE-QARGDSVDARSDVYSLGCVLYE 211
Query: 228 IVC 230
++
Sbjct: 212 VLT 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 41 IGRGGSGRVYKG-CINGGKEIAVKKL--IKIVEEGESEFRNEMKIIGRIHHKNLVDLVGF 97
+G+G + V++G G A+K I + + + R E +++ +++HKN+V L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLFAI 75
Query: 98 CSEGSNR--LLVYEFMRNGSLGNLLFRAEQR--LSWSERRRIALEIMEGLHYLHDECETR 153
E + R +L+ EF GSL +L L SE + +++ G+++L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 154 IIHCDIKPHNILM----DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR- 208
I+H +IKP NI+ D K++DFG ++ L+ D+ + L GT Y P+++ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVXLYGTEEYLHPDMYERA 190
Query: 209 ------NNRITVKADVYSFGVML 225
+ D++S GV
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 40 EIGRGGSGRVYK------GCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIH---HKN 90
EIG G G VYK G K + V E+ ++ R+ H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 91 LVDLVGFCSEG-SNR----LLVYEFMRNGSLGNLLFRAEQR-LSWSERRRIALEIMEGLH 144
+V L+ C+ ++R LV+E + + L L +A L + + + + GL
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE 204
+LH C I+H D+KP NIL+ K++DFGL+++ T V+ T Y APE
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPE 189
Query: 205 LHSRNNRITVKADVYSFGVMLLEI 228
+ ++ T D++S G + E+
Sbjct: 190 VLLQSTYAT-PVDMWSVGCIFAEM 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 134 RIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTV 193
+IA+ I++ L +LH + +IH D+KP N+L++ + K DFG+S L D + +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK--DI 195
Query: 194 LRGTRGYTAPE-LHSRNNR--ITVKADVYSFGVMLLEIVCCRKNVD 236
G + Y APE ++ N+ +VK+D++S G+ +E+ R D
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE--LHSRNNRITV 214
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE L N+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 215 KADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 --DWWALGVLIYEMAA 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIK--IVEEGESE--FRNEMKIIGRI-HHKNLVDLV 95
IGRG +V + I K++K +V + E + E + + +H LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLF--RAEQRLSWSERRRIALEIMEGLHYLHDECETR 153
C + +RL NG G+L+F + +++L R + EI L+YLH E
Sbjct: 73 S-CFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERG 126
Query: 154 IIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
II+ D+K N+L+D K++D+G+ K L D T + GT Y APE+ R
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEI-LRGED 182
Query: 212 ITVKADVYSFGVMLLEIVCCRKNVD 236
D ++ GV++ E++ R D
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E++ G + + L R R R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+L+D+ +++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 -DWWALGVLIYEMAA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R R A +I+ YLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIY 164
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 219
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 220 -DWWALGVLIYEMAA 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA 143
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 144 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 196
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 197 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 35 ENFK--EEIGRGGSGRVY-KGCING---GKEIAVKKLIK--IVEEGES--EFRNEMKIIG 84
ENF+ + +G G G+V+ I+G GK A+K L K IV++ ++ R E +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 85 RIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
I + + + + +L L+ +++ G L L + E R + E + EI+ L
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLAL 172
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH + II+ DIK NIL+D + ++DFGLSK D+T GT Y AP
Sbjct: 173 EHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 204 ELHSRNNRITVKA-DVYSFGVMLLEIVC 230
++ + KA D +S GV++ E++
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y AP + S+ V D ++ GV++ E+
Sbjct: 202 PEYLAPAIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 18 EEIKLRSFSY-EQIVLASENFKEEIGRGGSGRVYK-GCINGGKEIAVKKLIKIVEEGESE 75
E++K + Y E++ A+ + +GRG G V++ G + AVKK+ V E
Sbjct: 79 EKLKPVDYEYREEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-- 134
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI 135
E+ + +V L G EG + E + GSLG L+ EQ +R
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALY 189
Query: 136 AL-EIMEGLHYLHDECETRIIHCDIKPHNILM-DESWKAKISDFGLSKLLKTD----QTR 189
L + +EGL YLH RI+H D+K N+L+ + A + DFG + L+ D
Sbjct: 190 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
T + GT + APE+ K DV+S M+L ++
Sbjct: 247 TGDYIPGTETHMAPEV-VLGRSCDAKVDVWSSCCMMLHML 285
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 94 LVGF--CSEGSNRLLVYEFMRNGSLGNLLF--RAEQRLSWSERRRIALEIMEGLHYLHDE 149
LVG C + +RL NG G+L+F + +++L R + EI L+YLH
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-- 127
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGTRGYTAPELHS 207
E II+ D+K N+L+D K++D+G+ K L D T + GT Y APE+
Sbjct: 128 -ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEI-L 182
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVD 236
R D ++ GV++ E++ R D
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAA 169
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 222
Query: 198 RGYTAPE--LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE L N+ D ++ GV++ E+
Sbjct: 223 PEYLAPEIILSKGYNKAV---DWWALGVLIYEMAA 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVI 207
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGES------EFRNEMKIIGRIHHKNLVDL 94
+G G G V +G + ++K +K ++ S EF +E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 95 VGFCSEGSNR-----LLVYEFMRNGSLGNLLFRA-----EQRLSWSERRRIALEIMEGLH 144
+G C E S++ +++ FM+ G L L + + + + ++I G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 145 YLHDECETRIIHCDIKPHNILMDESWKAKISDFGLS-KLLKTDQTRTYTVLRGTRGYTAP 203
YL + +H D+ N ++ + ++DFGLS K+ D R + + + A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 204 ELHSRNNRI-TVKADVYSFGVMLLEIV 229
E S +R+ T K+DV++FGV + EI
Sbjct: 219 E--SLADRVYTSKSDVWAFGVTMWEIA 243
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 18 EEIKLRSFSY-EQIVLASENFKEEIGRGGSGRVYK-GCINGGKEIAVKKLIKIVEEGESE 75
E++K + Y E++ A+ + +GRG G V++ G + AVKK+ V E
Sbjct: 60 EKLKPVDYEYREEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-- 115
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRI 135
E+ + +V L G EG + E + GSLG L+ EQ +R
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALY 170
Query: 136 AL-EIMEGLHYLHDECETRIIHCDIKPHNILM-DESWKAKISDFGLSKLLKTD----QTR 189
L + +EGL YLH RI+H D+K N+L+ + A + DFG + L+ D
Sbjct: 171 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
T + GT + APE+ K DV+S M+L ++
Sbjct: 228 TGDYIPGTETHMAPEV-VLGRSCDAKVDVWSSCCMMLHML 266
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVI 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 94 LVGF--CSEGSNRLLVYEFMRNGSLGNLLF--RAEQRLSWSERRRIALEIMEGLHYLHDE 149
LVG C + +RL NG G+L+F + +++L R + EI L+YLH
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-- 138
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSK--LLKTDQTRTYTVLRGTRGYTAPELHS 207
E II+ D+K N+L+D K++D+G+ K L D T + GT Y APE+
Sbjct: 139 -ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEI-L 193
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVD 236
R D ++ GV++ E++ R D
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R R A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAA 141
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 142 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 194
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
Y APE + S+ V D ++ GV++ E+
Sbjct: 195 PEYLAPEIILSKGYNKAV--DWWALGVLIYEMAA 226
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVI 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 75 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 130
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 183
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVI 207
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN--EMKIIGRIHHKNLVDL 94
K +G G G V EI K I+ ++ R E+KI+ H+N++ +
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 95 VGF----CSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
E N + + + + L ++ + Q LS + + + + LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLL---------KTDQTRTYTVLRGTRGYT 201
+ +IH D+KP N+L++ + K+ DFGL++++ T Q TR Y
Sbjct: 131 -SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 202 APELHSRNNRITVKADVYSFGVMLLEIVCCRK 233
APE+ + + + DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 45 GSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNR 104
+GR Y I +KK + + ++ + E +++ H L L + + +R
Sbjct: 174 ATGRYYAMKI-------LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDR 225
Query: 105 L-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHN 163
L V E+ G L L R E+ S R EI+ L YLH E +++ D+K N
Sbjct: 226 LCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLEN 282
Query: 164 ILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGV 223
+++D+ KI+DFGL K D T GT Y APE+ +N D + GV
Sbjct: 283 LMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGV 340
Query: 224 MLLEIVCCR 232
++ E++C R
Sbjct: 341 VMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 17 FEEIKLRS-FSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE 75
FE +KL ++ +++L E +GR Y I +KK + + ++ +
Sbjct: 150 FEYLKLLGKGTFGKVILVKEK--------ATGRYYAMKI-------LKKEVIVAKDEVAH 194
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E +++ H L L + + +RL V E+ G L L R E+ S R
Sbjct: 195 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARF 252
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
EI+ L YLH E +++ D+K N+++D+ KI+DFGL K D T
Sbjct: 253 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTF 309
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
GT Y APE+ +N D + GV++ E++C R
Sbjct: 310 CGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 186
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 75 EFRNEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E E+ I+ ++ H N++ L ++ +L+ E + G L + L + E LS E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATS 119
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNI-LMDESWK---AKISDFGLSKLLKTDQTRT 190
+I++G++YLH + +I H D+KP NI L+D++ K+ DFGL+ + +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVE 174
Query: 191 YTVLRGTRGYTAPELHSRNNRITVKADVYSFGVM 224
+ + GT + APE+ + + ++AD++S GV+
Sbjct: 175 FKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVI 207
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 186
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 106 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 161
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 214
Query: 210 NRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
R T +DV+ FGV + EI+ + +++++++
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 34 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 92 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 146 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 250
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 251 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 305
Query: 320 NQEKST 325
+ +T
Sbjct: 306 MAKGTT 311
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 150 CETR-IIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
C +R ++H DIK NIL+D AK+ DFG LL + YT GTR Y+ PE S
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWIS 211
Query: 208 RNNRITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIV 245
R+ + A V+S G++L ++VC + RD EI+
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFE---RDQEIL 246
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 29 QIVLASENFKEEIGRGGSGRVY----KGCINGGKEIAVKKLIK---IVEEGESEFRNEMK 81
++ + ++ + +G+G G+V K G+ A+K L K I ++ + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEI 139
++ H L L + + +RL V E+ G L L R +R+ ER R EI
Sbjct: 58 VLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+ L YLH +++ DIK N+++D+ KI+DFGL K +D T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPE 170
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
Y APE+ +N D + GV++ E++C R
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCING-GKEIAVKKLIK---IVEEGESEFRNEMKIIG 84
++ + ++ + +G+G G+V G+ A+K L K I ++ + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 85 RIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEIMEG 142
H L L + + +RL V E+ G L L R +R+ ER R EI+
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSA 117
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
L YLH +++ DIK N+++D+ KI+DFGL K +D T GT Y A
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 203 PELHSRNNRITVKADVYSFGVMLLEIVCCR 232
PE+ +N D + GV++ E++C R
Sbjct: 174 PEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 45 GSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGSNR 104
+GR Y I ++K + I ++ + E +++ H L L + + +R
Sbjct: 33 ATGRYYAMKI-------LRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDR 84
Query: 105 L-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEIMEGLHYLHDECETRIIHCDIKPH 162
L V E+ G L L R +R+ ER R EI+ L YLH +++ DIK
Sbjct: 85 LCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLE 139
Query: 163 NILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFG 222
N+++D+ KI+DFGL K +D T GT Y APE+ +N D + G
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEV-LEDNDYGRAVDWWGLG 197
Query: 223 VMLLEIVCCR 232
V++ E++C R
Sbjct: 198 VVMYEMMCGR 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 29 QIVLASENFKEEIGRGGSGRVY----KGCINGGKEIAVKKLIK---IVEEGESEFRNEMK 81
++ + ++ + +G+G G+V K G+ A+K L K I ++ + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEI 139
++ H L L + + +RL V E+ G L L R +R+ ER R EI
Sbjct: 58 VLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 114
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+ L YLH +++ DIK N+++D+ KI+DFGL K +D T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPE 170
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
Y APE+ +N D + GV++ E++C R
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 186
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 135
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 188
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIA--VKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
EE+G+G V + C+ G+E A + K+ + E +I + H N+V L
Sbjct: 17 EELGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 95 VGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
SE + L+++ + G L + A + S ++ +I+E + + H + +
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCH---QMGV 131
Query: 155 IHCDIKPHNILMDESWKA---KISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNR 211
+H ++KP N+L+ K K++DFGL+ ++ +Q + + GT GY +PE+ R +
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEV-LRKDP 189
Query: 212 ITVKADVYSFGVML 225
D+++ GV+L
Sbjct: 190 YGKPVDLWACGVIL 203
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 29 QIVLASENFKEEIGRGGSGRVY----KGCINGGKEIAVKKLIK---IVEEGESEFRNEMK 81
++ + ++ + +G+G G+V K G+ A+K L K I ++ + E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 82 IIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEI 139
++ H L L + + +RL V E+ G L L R +R+ ER R EI
Sbjct: 61 VLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEI 117
Query: 140 MEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG 199
+ L YLH +++ DIK N+++D+ KI+DFGL K +D T GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPE 173
Query: 200 YTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
Y APE+ +N D + GV++ E++C R
Sbjct: 174 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 136
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 189
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 18 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 75
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 76 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 129
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 130 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 234
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 235 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 289
Query: 320 NQEKST 325
+ +T
Sbjct: 290 MAKGTT 295
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 138
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 191
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN-NRITV 214
H DI N+L+ + K+ DFGLS+ ++ + + + APE S N R T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE--SINFRRFTS 191
Query: 215 KADVYSFGVMLLEIV 229
+DV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 62 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 120 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 173
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 278
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 279 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 333
Query: 320 NQEKST 325
+ +T
Sbjct: 334 MAKGTT 339
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 14 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 71
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 72 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 125
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 126 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 230
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 231 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 285
Query: 320 NQEKST 325
+ +T
Sbjct: 286 MAKGTT 291
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 15 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 72
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 73 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 126
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 127 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 231
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 232 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 286
Query: 320 NQEKST 325
+ +T
Sbjct: 287 MAKGTT 292
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 58/243 (23%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEI-AVK-----KLIKIVEEGESEFRNEMKIIGRIHHK 89
+ K IG+G G V N + I A+K K+ +I + + E++++ ++HH
Sbjct: 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 90 NLVDLVGFCSEGSNRLLVYEFMRNGSLGNLL----------------------------- 120
N+ L + LV E G L + L
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 121 --------FRAEQRLSWSERRRIALEIM----EGLHYLHDECETRIIHCDIKPHNILM-- 166
FR + L + +R ++ IM LHYLH++ I H DIKP N L
Sbjct: 149 AINGSIHGFR--ESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFST 203
Query: 167 DESWKAKISDFGLSK-LLKTDQTRTY--TVLRGTRGYTAPE-LHSRNNRITVKADVYSFG 222
++S++ K+ DFGLSK K + Y T GT + APE L++ N K D +S G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 223 VML 225
V+L
Sbjct: 264 VLL 266
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCING-GKEIAVKKLIK---IVEEGESEFRNEMKIIG 84
++ + ++ + +G+G G+V G+ A+K L K I ++ + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 85 RIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEIMEG 142
H L L + + +RL V E+ G L L R +R+ ER R EI+
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSA 117
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
L YLH +++ DIK N+++D+ KI+DFGL K +D T GT Y A
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 203 PELHSRNNRITVKADVYSFGVMLLEIVCCR 232
PE+ +N D + GV++ E++C R
Sbjct: 174 PEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 17 FEEIKLRS-FSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE 75
FE +KL ++ +++L E +GR Y I +KK + + ++ +
Sbjct: 12 FEYLKLLGKGTFGKVILVKEK--------ATGRYYAMKI-------LKKEVIVAKDEVAH 56
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E +++ H L L + + +RL V E+ G L L R E+ S R
Sbjct: 57 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARF 114
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
EI+ L YLH E +++ D+K N+++D+ KI+DFGL K D T
Sbjct: 115 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXF 171
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
GT Y APE+ +N D + GV++ E++C R
Sbjct: 172 CGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 17 FEEIKLRS-FSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE 75
FE +KL ++ +++L E +GR Y I +KK + + ++ +
Sbjct: 10 FEYLKLLGKGTFGKVILVKEK--------ATGRYYAMKI-------LKKEVIVAKDEVAH 54
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E +++ H L L + + +RL V E+ G L L R E+ S R
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARF 112
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
EI+ L YLH E +++ D+K N+++D+ KI+DFGL K D T
Sbjct: 113 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXF 169
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
GT Y APE+ +N D + GV++ E++C R
Sbjct: 170 CGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 29 QIVLASENFKEEIGRGGSGRVYKGCING-GKEIAVKKLIK---IVEEGESEFRNEMKIIG 84
++ + ++ + +G+G G+V G+ A+K L K I ++ + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 85 RIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI-ALEIMEG 142
H L L + + +RL V E+ G L L R +R+ ER R EI+
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSA 117
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
L YLH +++ DIK N+++D+ KI+DFGL K +D T GT Y A
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 203 PELHSRNNRITVKADVYSFGVMLLEIVCCR 232
PE+ +N D + GV++ E++C R
Sbjct: 174 PEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 17 FEEIKLRS-FSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE 75
FE +KL ++ +++L E +GR Y I +KK + + ++ +
Sbjct: 11 FEYLKLLGKGTFGKVILVKEK--------ATGRYYAMKI-------LKKEVIVAKDEVAH 55
Query: 76 FRNEMKIIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRR 134
E +++ H L L + + +RL V E+ G L L R E+ S R
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARF 113
Query: 135 IALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVL 194
EI+ L YLH E +++ D+K N+++D+ KI+DFGL K D T
Sbjct: 114 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXF 170
Query: 195 RGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCR 232
GT Y APE+ +N D + GV++ E++C R
Sbjct: 171 CGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 20 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 133 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 187
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 188 EVILGMGYKEN------VDIWSVGCIMGEMV 212
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 41 IGRGGSGRVY-KGCINGGKEIAVKKL--IKIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
+G G GRV + G A+K L K+V+ + E NE +I+ ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ SN +V E+ G + + L R R R A +I+ YLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIY 165
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE-LHSRNNRITVK 215
D+KP N+++D+ K++DFG +K +K RT+ L GT Y APE + S+ V
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWX-LCGTPEYLAPEIILSKGYNKAV- 220
Query: 216 ADVYSFGVMLLEIVC 230
D ++ GV++ E+
Sbjct: 221 -DWWALGVLIYEMAA 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 38 KEEIGRGGSGRVYK-GCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIGRIHHKNLVDLV 95
+ +GRG G V++ G + AVKK+ V FR E+ + +V L
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLY 132
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETR 153
G EG + E + GSLG L+ +Q E R + + +EGL YLH R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---R 186
Query: 154 IIHCDIKPHNILM-DESWKAKISDFGLSKLLKTD----QTRTYTVLRGTRGYTAPELHSR 208
I+H D+K N+L+ + +A + DFG + L+ D T + GT + APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-VM 245
Query: 209 NNRITVKADVYSFGVMLLEIV 229
K D++S M+L ++
Sbjct: 246 GKPCDAKVDIWSSCCMMLHML 266
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVK-----KLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E IG+G V + CIN G++ AVK K + + E I + H ++
Sbjct: 30 EVIGKG-PFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSER--RRIALEIMEGLHYLHD 148
V+L+ S +V+EFM L ++ RA+ +SE +I+E L Y HD
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 149 ECETRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPE 204
IIH D+KPH +L+ + S K+ FG++ ++ ++ R GT + APE
Sbjct: 149 ---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPE 203
Query: 205 LHSRNNRITVKADVYSFGVMLL 226
+ R DV+ GV+L
Sbjct: 204 VVKREP-YGKPVDVWGCGVILF 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 78 NEMKIIGRIHHKNLVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
NE +I+ ++ LV L + SN +V E++ G + + L R R S R A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAA 148
Query: 138 EIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGT 197
+I+ YLH +I+ D+KP N+L+D+ +++DFG +K +K RT+ L GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWX-LCGT 201
Query: 198 RGYTAPE-LHSRNNRITVKADVYSFGVMLLEIVC 230
APE + S+ V D ++ GV++ E+
Sbjct: 202 PEALAPEIILSKGYNKAV--DWWALGVLIYEMAA 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 38 KEEIGRGGSGRVYK-GCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIGRIHHKNLVDLV 95
+ +GRG G V++ G + AVKK+ V FR E+ + +V L
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLY 116
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETR 153
G EG + E + GSLG L+ +Q E R + + +EGL YLH R
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---R 170
Query: 154 IIHCDIKPHNILM-DESWKAKISDFGLSKLLKTD----QTRTYTVLRGTRGYTAPELHSR 208
I+H D+K N+L+ + +A + DFG + L+ D T + GT + APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-VM 229
Query: 209 NNRITVKADVYSFGVMLLEIV 229
K D++S M+L ++
Sbjct: 230 GKPCDAKVDIWSSCCMMLHML 250
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 42 GRGGSGRVYKGC-INGGKEIAVKKLIKIVEEGESEFRNE----MKIIGRIHHKNLVDLVG 96
G+G G V G + G +A+KK+I+ + FRN M+ + +HH N+V L
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLAVLHHPNIVQLQS 86
Query: 97 -FCSEGS-NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIA----------LEIMEGLH 144
F + G +R +Y + + + L R + RR++A +++ +
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYY---RRQVAPPPILIKVFLFQLIRSIG 143
Query: 145 YLHDECETRIIHCDIKPHNILMDES-WKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
LH + H DIKPHN+L++E+ K+ DFG +K L + + +R Y AP
Sbjct: 144 CLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRYYRAP 200
Query: 204 ELHSRNNRITVKADVYSFGVMLLEIV 229
EL N T D++S G + E++
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 38 KEEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE--GESEFRNEMKIIGRIHHKNLV-- 92
K IGRG G VY N K +A+KK+ ++ E+ E+ I+ R+ ++
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 93 -------DLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHY 145
DL+ F + L + + + L L F+ L+ + I ++ G +
Sbjct: 93 HDLIIPEDLLKF-----DELYIVLEIADSDLKKL-FKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 146 LHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQ------------------ 187
+H E+ IIH D+KP N L+++ KI DFGL++ + +D+
Sbjct: 147 IH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 188 ------TRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIVCCRKN 234
+ T TR Y APEL T D++S G + E++ K+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 56/227 (24%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL-----------IKIVEEGESEFRNEMKIIGRIHH 88
+G G SG V ++G G + +AVK++ IK++ E + H
Sbjct: 41 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIKLLTESDD-------------H 86
Query: 89 KNLVDLVGFCSEGSNRLLVYEF-MRNGSLGNLL----FRAEQRLSWSERRRIAL--EIME 141
N++ +CSE ++R L + N +L +L+ E E I+L +I
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 142 GLHYLHDECETRIIHCDIKPHNILMD-------------ESWKAKISDFGLSKLLKTDQT 188
G+ +LH +IIH D+KP NIL+ E+ + ISDFGL K L + Q
Sbjct: 145 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 189 RTYTVLR---GTRGYTAPEL--HSRNNRITVKADVYSFGVMLLEIVC 230
L GT G+ APEL S R+T D++S G + I+
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 566
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 56/227 (24%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL-----------IKIVEEGESEFRNEMKIIGRIHH 88
+G G SG V ++G G + +AVK++ IK++ E + H
Sbjct: 41 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIKLLTESDD-------------H 86
Query: 89 KNLVDLVGFCSEGSNRLLVYEF-MRNGSLGNLL----FRAEQRLSWSERRRIAL--EIME 141
N++ +CSE ++R L + N +L +L+ E E I+L +I
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 142 GLHYLHDECETRIIHCDIKPHNILMD-------------ESWKAKISDFGLSKLLKTDQT 188
G+ +LH +IIH D+KP NIL+ E+ + ISDFGL K L + Q
Sbjct: 145 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 189 RTYTVLR---GTRGYTAPEL--HSRNNRITVKADVYSFGVMLLEIVC 230
L GT G+ APEL S R+T D++S G + I+
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLI---KIVEEGESEFR-NEMKIIGRIHHKNLVDLVG 96
IGRG G V +++ KL+ ++++ +S F E I+ + +V L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL-- 140
Query: 97 FCSEGSNRLL--VYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRI 154
FC+ ++ L V E+M G L NL+ + W+ + E++ L +H +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA--KFYTAEVVLALDAIH---SMGL 195
Query: 155 IHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTY--TVLRGTRGYTAPEL---HSRN 209
IH D+KP N+L+D+ K++DFG +K D+T GT Y +PE+ +
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFG--TCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 210 NRITVKADVYSFGVMLLEIV 229
+ D +S GV L E++
Sbjct: 254 GYYGRECDWWSVGVFLFEML 273
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 39 EEIGRGGSGRVYKGCIN--GGKEIAVK-----KLIKIVEEGESEFRNEMKIIGRIHHKNL 91
E IG+G V + CIN G++ AVK K + + E I + H ++
Sbjct: 32 EVIGKG-PFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 92 VDLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSER--RRIALEIMEGLHYLHD 148
V+L+ S +V+EFM L ++ RA+ +SE +I+E L Y HD
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 149 ECETRIIHCDIKPHNILM---DESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPE 204
IIH D+KPH +L+ + S K+ FG++ ++ ++ R GT + APE
Sbjct: 151 ---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPE 205
Query: 205 LHSRNNRITVKADVYSFGVMLL 226
+ R DV+ GV+L
Sbjct: 206 VVKREP-YGKPVDVWGCGVILF 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 62 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 120 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 173
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + GT Y PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 278
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 279 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 333
Query: 320 NQEKST 325
+ +T
Sbjct: 334 MAKGTT 339
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE-----FRNEMKIIGRIHHKNLVDLV 95
IG G G V++G + A+ IK + S+ F E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRII 155
G +E ++ E G L + L + L + A ++ L YL + R +
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 156 HCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRG-----YTAPELHSRN- 209
H DI N+L+ + K+ DFGLS+ ++ T + ++G + APE S N
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPE--SINF 566
Query: 210 NRITVKADVYSFGVMLLEIV 229
R T +DV+ FGV + EI+
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHKNLVDLV 95
+ IG G G V G +AVKKL + + R E+ ++ ++HKN++ L+
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 96 GFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
+ E + LV E M NL L + +++ G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD----ANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRN 209
IIH D+KP NI++ KI DFGL++ T+ T V+ TR Y APE+
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEV-ILG 199
Query: 210 NRITVKADVYSFGVMLLEIV 229
D++S G ++ E+V
Sbjct: 200 MGYAANVDIWSVGCIMGELV 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 38 KEEIGRGGSGRVYK-GCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIGRIHHKNLVDLV 95
+ +GRG G V++ G + AVKK+ V FR E+ + +V L
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLY 130
Query: 96 GFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL--EIMEGLHYLHDECETR 153
G EG + E + GSLG L+ +Q E R + + +EGL YLH R
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---R 184
Query: 154 IIHCDIKPHNILM-DESWKAKISDFGLSKLLKTD----QTRTYTVLRGTRGYTAPELHSR 208
I+H D+K N+L+ + +A + DFG + L+ D T + GT + APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-VM 243
Query: 209 NNRITVKADVYSFGVMLLEIV 229
K D++S M+L ++
Sbjct: 244 GKPCDAKVDIWSSCCMMLHML 264
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 65 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 232
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 233 EVILGMGYKEN------VDIWSVGCIMGEMV 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 21 QNLKP-IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 188
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIVC 230
E+ + N D++S G ++ E+VC
Sbjct: 189 EVILGMGYKEN------VDLWSVGCIMGEMVC 214
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 60/230 (26%)
Query: 41 IGRGGSGRV-YKGCINGGKEIAVKKL-----------IKIVEEGESEFRNEMKIIGRIHH 88
+G G SG V ++G G + +AVK++ IK++ E + H
Sbjct: 23 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIKLLTESDD-------------H 68
Query: 89 KNLVDLVGFCSEGSNRLLVYEF-MRNGSLGNLL----FRAEQRLSWSERRRIAL--EIME 141
N++ +CSE ++R L + N +L +L+ E E I+L +I
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 142 GLHYLHDECETRIIHCDIKPHNILMD-------------ESWKAKISDFGLSKLLKTDQT 188
G+ +LH +IIH D+KP NIL+ E+ + ISDFGL K L + Q
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 189 RTYTVLR---GTRGYTAPELHSRNN------RITVKADVYSFGVMLLEIV 229
L GT G+ APEL +N R+T D++S G + I+
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 65 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 232
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 233 EVILGMGYKEN------VDIWSVGCIMGEMV 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 32 QNLKP-IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 145 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 199
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIVC 230
E+ + N D++S G ++ E+VC
Sbjct: 200 EVILGMGYKEN------VDLWSVGCIMGEMVC 225
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIK---IVEEGESEFRN-EMKII 83
+++ L NF +G+G G+V G E+ K++K ++++ + E E +++
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 84 GRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIM 140
+ + C + +RL V E++ NG G+L++ +Q + E + A EI
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYV-NG--GDLMYHIQQVGRFKEPHAVFYAAEIA 131
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGY 200
GL +L + II+ D+K N+++D KI+DFG+ K D T GT Y
Sbjct: 132 IGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT-KXFCGTPDY 187
Query: 201 TAPELHSRNNRITVKADVYSFGVMLLEIVC 230
APE+ + D ++FGV+L E++
Sbjct: 188 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLA 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 28 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 141 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 195
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 196 EVILGMGYKEN------VDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 26 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 139 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 193
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 194 EVILGMGYKEN------VDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 21 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 188
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 189 EVILGMGYKEN------VDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 21 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 188
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 189 EVILGMGYKEN------VDIWSVGCIMGEMV 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 28 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 141 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 195
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 196 EVILGMGYKEN------VDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y ++ + +A+KKL + + R E+ ++ ++HK
Sbjct: 20 QNLKP-IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + LV E M NL + L + +++ G+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 133 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 187
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S G ++ E+V
Sbjct: 188 EVILGMGYKEN------VDIWSVGCIMGEMV 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 143/306 (46%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 34 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 92 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 145
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D + GT Y PE
Sbjct: 146 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 250
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 251 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 305
Query: 320 NQEKST 325
+ +T
Sbjct: 306 MAKGTT 311
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 39 EEIGRGGSGRVYKGCING-GKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHKNLVDLV 95
+ IG G G V G +AVKKL + + R E+ ++ ++HKN++ L+
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 96 GFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDE 149
+ E + LV E M NL L + +++ G+ +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMD----ANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 141
Query: 150 CETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPEL---- 205
IIH D+KP NI++ KI DFGL++ T+ T V+ TR Y APE+
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV--TRYYRAPEVILGM 198
Query: 206 -HSRNNRITVKADVYSFGVMLLEIV 229
+ N D++S G ++ E+V
Sbjct: 199 GYKEN------VDIWSVGCIMGELV 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S GV++ E++
Sbjct: 195 EVILGMGYKEN------VDIWSVGVIMGEMI 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 28 EQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIK---IVEEGESEFRN-EMKII 83
+++ L NF +G+G G+V G E+ K++K ++++ + E E +++
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 84 GRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRI--ALEIM 140
+ + C + +RL V E++ NG G+L++ +Q + E + A EI
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYV-NG--GDLMYHIQQVGRFKEPHAVFYAAEIA 452
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGY 200
GL +L + II+ D+K N+++D KI+DFG+ K D T GT Y
Sbjct: 453 IGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDY 508
Query: 201 TAPELHSRNNRITVKADVYSFGVMLLEIVC 230
APE+ + D ++FGV+L E++
Sbjct: 509 IAPEIIAYQP-YGKSVDWWAFGVLLYEMLA 537
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKA--KISDFGLSKL 182
Q S R+ A I++ L LH + RIIHCD+KP NIL+ + ++ K+ DFG S
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Query: 183 LKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
+ R YT ++ +R Y APE+ R + D++S G +L E++
Sbjct: 252 ---EHQRVYTXIQ-SRFYRAPEV-ILGARYGMPIDMWSLGCILAELL 293
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T T V+ TR Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIV 229
E+ + N D++S GV++ E++
Sbjct: 195 EVILGMGYKEN------VDIWSVGVIMGEMI 219
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 125 QRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKA--KISDFGLSKL 182
Q S R+ A I++ L LH + RIIHCD+KP NIL+ + ++ K+ DFG S
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
Query: 183 LKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
+ R YT ++ +R Y APE+ R + D++S G +L E++
Sbjct: 252 ---EHQRVYTXIQ-SRFYRAPEV-ILGARYGMPIDMWSLGCILAELL 293
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLI---KIVEEGESE-FRNEMKIIGRIHHKNLVDLVG 96
IGRG G V + + I K++ ++++ E+ FR E ++ + + L
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ ++ LV ++ G L LL + E +L R E++ + +H + +H
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH---QLHYVH 198
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE----LHSRNNRI 212
DIKP N+L+D + +++DFG + D T +V GT Y +PE + +
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 258
Query: 213 TVKADVYSFGVMLLEIV 229
+ D +S GV + E++
Sbjct: 259 GPECDWWSLGVCMYEML 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 18 EEIKLRSFSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEI--AVKKLIKIVEEGESE 75
++I L S + +F + IG+G G+V + +E+ AVK L K + E
Sbjct: 23 QQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKE 81
Query: 76 FRNEMK----IIGRIHHKNLVDLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWS 130
++ M ++ + H LV L F + +++L V +++ G L L R +R
Sbjct: 82 EKHIMSERNVLLKNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLE 138
Query: 131 ERRRI-ALEIMEGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTR 189
R R A EI L YLH I++ D+KP NIL+D ++DFGL K +
Sbjct: 139 PRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNS 194
Query: 190 TYTVLRGTRGYTAPE-LHSRNNRITVKADVYSFGVMLLEIV 229
T + GT Y APE LH + TV D + G +L E++
Sbjct: 195 TTSTFCGTPEYLAPEVLHKQPYDRTV--DWWCLGAVLYEML 233
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+L+D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 36 NFKEEIGRG--GSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGR--IHHKN 90
+F ++IG G G R+ + + KE+ +K +E G + N + +II + H N
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLT--KELVA---VKYIERGAAIDENVQREIINHRSLRHPN 77
Query: 91 LVDLVGFCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
+V ++ ++ E+ G L + A R S E R +++ G+ Y H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCH--- 133
Query: 151 ETRIIHCDIKPHNILMDESW--KAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSR 208
+I H D+K N L+D S + KI DFG SK TV GT Y APE+ R
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLR 191
Query: 209 NNRITVKADVYSFGVML 225
ADV+S GV L
Sbjct: 192 QEYDGKIADVWSCGVTL 208
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 41 IGRGGSGRVYKGCINGGKEIAVKKLI---KIVEEGESE-FRNEMKIIGRIHHKNLVDLVG 96
IGRG G V + + I K++ ++++ E+ FR E ++ + + L
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 97 FCSEGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIH 156
+ ++ LV ++ G L LL + E +L R E++ + +H + +H
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH---QLHYVH 214
Query: 157 CDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPE----LHSRNNRI 212
DIKP N+L+D + +++DFG + D T +V GT Y +PE + +
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 274
Query: 213 TVKADVYSFGVMLLEIV 229
+ D +S GV + E++
Sbjct: 275 GPECDWWSLGVCMYEML 291
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 143/306 (46%), Gaps = 47/306 (15%)
Query: 39 EEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESE----FRNEMKIIGRI--HHKNLV 92
++IG GGS +V++ +N K+I K + + EE +++ +RNE+ + ++ H ++
Sbjct: 62 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 93 DLVGFCSEGSNRLLVYEFMRNGSLG-NLLFRAEQRLSWSERRRIALEIMEGLHYLHDECE 151
L + E +++ +Y M G++ N + ++ + ER+ ++E +H +H +
Sbjct: 120 RLYDY--EITDQY-IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---Q 173
Query: 152 TRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR-GTRGYTAPEL----- 205
I+H D+KP N L+ + K+ DFG++ ++ D T + G Y PE
Sbjct: 174 HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 206 HSRNN-----RITVKADVYSFGVMLLEIVCCRKNVDESLRDDEIVLIDWAHQCYEAGELQ 260
SR N +I+ K+DV+S G +L + + + + + +L
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------------QISKLH 278
Query: 261 NLVSDQEDVNIEEFENLVKIGLWCV-ECELNLRPTMKQVIWMMEGIVPPHQNMLTHPTST 319
++ ++ EF ++ + L V +C L P KQ I + E + P+ + THP +
Sbjct: 279 AIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDP--KQRISIPELLAHPYVQIQTHPVNQ 333
Query: 320 NQEKST 325
+ +T
Sbjct: 334 MAKGTT 339
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 26 SYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIG 84
S ++ V E +G+G G V++G G + +AVK I + +S FR E+
Sbjct: 1 SMQRTVAHQITLLECVGKGRYGEVWRGSWQG-ENVAVK--IFSSRDEKSWFRETELYNTV 57
Query: 85 RIHHKNLVDLVGFCSEGSNR------LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
+ H+N++ + S+ ++R L+ + GSL + L L RI L
Sbjct: 58 MLRHENILGFIA--SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLS 113
Query: 139 IMEGLHYLHDEC-----ETRIIHCDIKPHNILMDESWKAKISDFGLSKL--LKTDQTRTY 191
I GL +LH E + I H D+K NIL+ ++ + I+D GL+ + T+Q
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 192 TVLR-GTRGYTAPELHSRNNRITV-----KADVYSFGVMLLEIVCCRKNVDESLRDD 242
R GT+ Y APE+ ++ + D+++FG++L E+ R+ V + +D
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVED 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 143 LHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTA 202
L +LH + ++H D+KP NI + + K+ DFGL L++ V G Y A
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 203 PELHSRNNRITVKADVYSFGVMLLEIVC 230
PEL ADV+S G+ +LE+ C
Sbjct: 225 PEL--LQGSYGTAADVFSLGLTILEVAC 250
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 36 NFKEEIGRGGSGRVYKGC-INGGKEIAVKKLI--KIVEEGESEFRNEMKIIGRIHHKNLV 92
F EIGRG VYKG E+A +L K+ + F+ E + + + H N+V
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 93 ---DLVGFCSEGSNRL-LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHD 148
D +G + LV E +G+L L R + R +I++GL +LH
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF-KVXKIKVLRSWCRQILKGLQFLHT 147
Query: 149 ECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHS 207
IIH D+K NI + + KI D GL+ L + + + GT + APE +
Sbjct: 148 RTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK---AVIGTPEFXAPEXYE 203
Query: 208 RNNRITVKADVYSFGVMLLE 227
+V DVY+FG LE
Sbjct: 204 EKYDESV--DVYAFGXCXLE 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 26 SYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFR-NEMKIIG 84
S ++ V E +G+G G V++G G + +AVK I + +S FR E+
Sbjct: 1 SMQRTVARDITLLECVGKGRYGEVWRGSWQG-ENVAVK--IFSSRDEKSWFRETELYNTV 57
Query: 85 RIHHKNLVDLVGFCSEGSNR------LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALE 138
+ H+N++ + S+ ++R L+ + GSL + L L RI L
Sbjct: 58 MLRHENILGFIA--SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLS 113
Query: 139 IMEGLHYLHDEC-----ETRIIHCDIKPHNILMDESWKAKISDFGLSKL--LKTDQTRTY 191
I GL +LH E + I H D+K NIL+ ++ + I+D GL+ + T+Q
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 192 TVLR-GTRGYTAPELHSRNNRITV-----KADVYSFGVMLLEIVCCRKNVDESLRDD 242
R GT+ Y APE+ ++ + D+++FG++L E+ R+ V + +D
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVED 228
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 29/238 (12%)
Query: 25 FSYEQIVLASENFKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFR-NEMKII 83
F ++ V E +G+G G V++G G + +AVK I + +S FR E+
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRGSWQG-ENVAVK--IFSSRDEKSWFRETELYNT 85
Query: 84 GRIHHKNLVDLVGFCSEGSNR------LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIAL 137
+ H+N++ + S+ ++R L+ + GSL + L L RI L
Sbjct: 86 VMLRHENILGFIA--SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVL 141
Query: 138 EIMEGLHYLHDEC-----ETRIIHCDIKPHNILMDESWKAKISDFGLSKL--LKTDQTRT 190
I GL +LH E + I H D+K NIL+ ++ + I+D GL+ + T+Q
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 201
Query: 191 YTVLR-GTRGYTAPELHSRNNRITV-----KADVYSFGVMLLEIVCCRKNVDESLRDD 242
R GT+ Y APE+ ++ + D+++FG++L E+ R+ V + +D
Sbjct: 202 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNGIVED 257
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 36 NFKEEIGRGGSGRVYKGCINGGKEIAVK--KLIKIVEEGESEFRNEMKIIGRIHHKNLVD 93
NF ++ SG ++KG G +I VK K+ +F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 94 LVGFC--SEGSNRLLVYEFMRNGSLGNLL-----FRAEQRLSWSERRRIALEIMEGLHYL 146
++G C + L+ +M GSL N+L F +Q S+ + AL++ G+ +L
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ----SQAVKFALDMARGMAFL 127
Query: 147 HDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
H E I + ++++DE A+IS K R Y + APE
Sbjct: 128 H-TLEPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGRMYA-----PAWVAPEAL 180
Query: 207 SRNNRITVK--ADVYSFGVMLLEIVC 230
+ T + AD++SF V+L E+V
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 45 GSGRVYKGCIN--GGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDLVGFCSEGS 102
GS + + C++ + AVK + K +E + +K+ H N+V L +
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFHDQL 79
Query: 103 NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDECETRIIHCDIKPH 162
+ LV E + G L + + ++ S +E I +++ + ++HD ++H D+KP
Sbjct: 80 HTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPE 135
Query: 163 NILM---DESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELHSRNNRITVKADVY 219
N+L +++ + KI DFG ++L D T T Y APEL ++N D++
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNG-YDESCDLW 193
Query: 220 SFGVMLLEIV 229
S GV+L ++
Sbjct: 194 SLGVILYTML 203
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 63
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 121
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 181 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 64
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 122
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 182 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L+ + ++ LV+E++ N L Q L+ + R E+++ L Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCH 154
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ I+H D+KPHN+++D + K ++ D+GL++ Q Y V +R + PEL
Sbjct: 155 SKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ--EYNVRVASRYFKGPELL 209
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRK 233
D++S G ML ++ R+
Sbjct: 210 VDYQMYDYSLDMWSLGCMLASMIFRRE 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 46 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 102
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 160
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 220 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 33 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 89
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 147
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 207 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 146
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 147 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 201
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 202 VDYQMYDYSLDMWSLGCMLASMI 224
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L+ + ++ LV+E++ N L Q L+ + R E+++ L Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCH 149
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
+ I+H D+KPHN+++D + K ++ D+GL++ Q Y V +R + PEL
Sbjct: 150 SKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ--EYNVRVASRYFKGPELL 204
Query: 207 SRNNRITVKADVYSFGVMLLEIVCCRK 233
D++S G ML ++ R+
Sbjct: 205 VDYQMYDYSLDMWSLGCMLASMIFRRE 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 147
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 148 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 202
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMI 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 147
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 148 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 202
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMI 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 32/220 (14%)
Query: 38 KEEIGRGGSGRVYKGC-INGGKEIAVKKLIKIVEE--GESEFRNEMKIIGRIHHKNLVDL 94
K IGRG G VY N K +A+KK+ ++ E+ E+ I+ R+ ++ L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 95 VGFCSEGS----NRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC 150
+ L + + + L L F+ L+ + I ++ G +++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKL-FKTPIFLTEEHIKTILYNLLLGENFIH--- 146
Query: 151 ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQ---------------------TR 189
E+ IIH D+KP N L+++ K+ DFGL++ + +++ +
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 190 TYTVLRGTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
T TR Y APEL T D++S G + E++
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 69
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 127
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 187 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIVC 230
E+ + N D++S G ++ E+VC
Sbjct: 195 EVILGMGYKEN------VDIWSVGCIMGEMVC 220
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNRL--LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 37 FKEEIGRGGSGRVYKGCINGGKEIAVKKLIKIVEEGESEFRN-EMKIIGRIHHKNLVDLV 95
+E IG+G G V++G G +E+AVK I E S FR E+ + H+N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKWRG-EEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFI 66
Query: 96 GFCSEGSNRL----LVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLHDEC- 150
++ + LV ++ +GSL + L R ++ ++AL GL +LH E
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIV 124
Query: 151 ----ETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----GTRGYTA 202
+ I H D+K NIL+ ++ I+D GL+ + T T + GT+ Y A
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 203 PELHSRNNRITVK-------ADVYSFGVMLLEIV 229
PE+ ++ I +K AD+Y+ G++ EI
Sbjct: 184 PEV--LDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----RQTLTDYDIRFYMYEILKALDYCH 148
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 203
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 90 NLVDLVGFCSEGSNR--LLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGLHYLH 147
N++ L + +R LV+E + N L Q L+ + R EI++ L Y H
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 153
Query: 148 DECETRIIHCDIKPHNILMD-ESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAPELH 206
I+H D+KPHN+++D E K ++ D+GL++ Q Y V +R + PEL
Sbjct: 154 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELL 208
Query: 207 SRNNRITVKADVYSFGVMLLEIV 229
D++S G ML ++
Sbjct: 209 VDYQMYDYSLDMWSLGCMLASMI 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 41 IGRGGSGRVYKG------CINGGKEIAVKKLIKIVEEGESEFRNEMKIIGRIHHKNLVDL 94
+GRGG G V++ C K I + E + E+K + ++ H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRY 68
Query: 95 VGFCSE---------GSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRR-----IALEIM 140
E S ++ +Y M+ NL R + ER R I L+I
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 141 EGLHYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLR----- 195
E + +LH + ++H D+KP NI K+ DFGL + D+ TVL
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ-TVLTPMPAY 184
Query: 196 -------GTRGYTAPELHSRNNRITVKADVYSFGVMLLEIV 229
GT+ Y +PE N + K D++S G++L E++
Sbjct: 185 ARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 35 ENFKEEIGRGGSGRV---YKGCINGGKEIAVKKLIKIVEEGESEFR--NEMKIIGRIHHK 89
+N K IG G G V Y + + +A+KKL + + R E+ ++ ++HK
Sbjct: 27 QNLKP-IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 90 NLVDLVGFCS------EGSNRLLVYEFMRNGSLGNLLFRAEQRLSWSERRRIALEIMEGL 143
N++ L+ + E + +V E M NL + L + +++ G+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 144 HYLHDECETRIIHCDIKPHNILMDESWKAKISDFGLSKLLKTDQTRTYTVLRGTRGYTAP 203
+LH IIH D+KP NI++ KI DFGL++ T V+ TR Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAP 194
Query: 204 EL-----HSRNNRITVKADVYSFGVMLLEIVC 230
E+ + N D++S G ++ E+VC
Sbjct: 195 EVILGMGYKEN------VDLWSVGCIMGEMVC 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,957,382
Number of Sequences: 62578
Number of extensions: 414193
Number of successful extensions: 3167
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 1067
Number of HSP's gapped (non-prelim): 1112
length of query: 325
length of database: 14,973,337
effective HSP length: 99
effective length of query: 226
effective length of database: 8,778,115
effective search space: 1983853990
effective search space used: 1983853990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)