BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047717
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0P457|KTI12_DANRE Protein KTI12 homolog OS=Danio rerio GN=kti12 PE=2 SV=2
Length = 275
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 172/305 (56%), Gaps = 35/305 (11%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLR 60
M LI++CG P SGK+ A L + ++ ++ V I+ + +D+N YA EKNLR
Sbjct: 1 MPLILMCGYPCSGKTRRAQELRDYFTQNTGRK-VHIVGDEDQGIDKNSVYADSQKEKNLR 59
Query: 61 GVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNK 120
G LR+EV+R V+KD+I+I+DSLN IKGYRYEL+CL + +C++Y D +WNK
Sbjct: 60 GALRAEVERKVNKDDIVILDSLNYIKGYRYELFCLIKHTQTPHCLVYSLTSADLSSEWNK 119
Query: 121 ERHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFEL-----CPYKDAIENSSAAILDA 175
+R + ++ Y +I + L+ RFE PD RNRWDSPLF + P++ AI DA
Sbjct: 120 DR--EADSQYTQEILDALILRFEAPDSRNRWDSPLFTIQQDDSLPFE--------AICDA 169
Query: 176 VAYLTKKVDSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGP 235
L K+ K P +T++ S N LYELD+ TQ+V+ AV+E+Q ++ G
Sbjct: 170 ---LFKR--------KAPPPNQSTKSQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGD 218
Query: 236 MNGISLGQGLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYL 295
+ IS+ I ++RS+ + ELR+LRR FI T P + MFV YL
Sbjct: 219 L--ISIPGATEKIELTRSLNMVELRKLRRQFISYTKMH------PTENIGQIANMFVQYL 270
Query: 296 NRELE 300
N+ +
Sbjct: 271 NKSMH 275
>sp|Q4KLF3|KTI12_XENLA Protein KTI12 homolog OS=Xenopus laevis GN=kti12 PE=2 SV=1
Length = 275
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 166/303 (54%), Gaps = 32/303 (10%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLR 60
M LI++CG P SGKS + L E L++S K V II + +DRN YA EK+LR
Sbjct: 1 MPLILLCGFPCSGKSSRSQELQEHLEQSGRK--VHIIGDHVLGVDRNAVYADSREEKDLR 58
Query: 61 GVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNK 120
G LR+ V+R ++K++++I+DSLN IKGYRYEL+CL + +C+++C + WN+
Sbjct: 59 GSLRAAVERKLNKEDVVILDSLNYIKGYRYELFCLIKHVQTPHCLIHCITSPEVSSTWNQ 118
Query: 121 ERHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKD---AIENSSAAILDAVA 177
R +K E Y+ +IF+ LV+RFE PD RNRWDSPLF + +KD +E AI
Sbjct: 119 HR-DKNE-QYNQEIFDSLVQRFEFPDSRNRWDSPLFSV--HKDEKLPLEQICNAIFHR-- 172
Query: 178 YLTKKVDSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGPMN 237
K P +TQ S N L+ELD+ TQEV+ AV+ AQ ++ G +
Sbjct: 173 -------------KAPPPNQSTQMQPLSSTNFLHELDKVTQEVVTAVLSAQKTSIPG--D 217
Query: 238 GISLGQGLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYLNR 297
I + + + R + + ELRRLR+ FI T P + MFV YLN+
Sbjct: 218 VIMVPGASEKVQLPRILSMSELRRLRQQFISYTKLH------PNENISQLANMFVQYLNQ 271
Query: 298 ELE 300
+
Sbjct: 272 SIH 274
>sp|Q9P7V4|KTI12_SCHPO Protein kti12 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=kti12 PE=3 SV=1
Length = 281
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 168/308 (54%), Gaps = 36/308 (11%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKET-------VRIIDEASFHLDRNQSYASM 53
M LI++ G PSSGK+ + L +AL++ + V II++ S ++++ ++Y
Sbjct: 1 MPLIIVSGYPSSGKTTRSNELKKALEDRIHQNIDNTKDYRVIIINDESLNIEK-ETYRES 59
Query: 54 PAEKNLRGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEED 113
EK RG+L S V R +SK +I D+LN IKG+RY+L+C +++ +CV++ + +D
Sbjct: 60 KNEKAARGLLYSAVQRELSKSTFVICDALNYIKGFRYQLYCESKSMYTTHCVIHVAVPQD 119
Query: 114 HCRKWNKERHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAIL 173
CRK+N + E Y D + E L+ R+E+P+ RWDSPLF + +++S I
Sbjct: 120 LCRKFNSNK----EQPYPDDVLEQLMFRYEEPNGMTRWDSPLFTVLH-----DDASCPID 170
Query: 174 DAVAYLTKKVDSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALG 233
D + L + K +++P +E N LYELD+ TQ+VI +++ +
Sbjct: 171 DIWSVLIHNKNVKPNQATMVKPP--------AEVNYLYELDKTTQDVIMLILDNSNDTSL 222
Query: 234 GPMNGISLGQGLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVD 293
+ G L LP++++S LP L+RLRR FI++ Q S + + K MFV+
Sbjct: 223 ITVPGSKLQIALPSVTVS----LPLLQRLRRQFIQINRQQSY-------NTNVLKEMFVE 271
Query: 294 YLNRELET 301
+LN + ET
Sbjct: 272 FLNGQFET 279
>sp|P34253|KTI12_YEAST Protein KTI12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=KTI12 PE=1 SV=2
Length = 313
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 35/323 (10%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKE------SEAKETVRIIDEASFHLDRNQSYASMP 54
M L++ G P SGK+ A L + L+ S +K ++ + S + ++ Y +
Sbjct: 1 MPLVLFTGYPCSGKTTLAKHLVQLLQSKIDATPSLSKYSITYHSDESLGI-KHSDYITSQ 59
Query: 55 AEKNLRGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDH 114
E+ LR + S V R +SK+ I+IVDSLN IKG+RY+L C + +CV+ +
Sbjct: 60 DERKLRSEIISAVKRDLSKNKIVIVDSLNYIKGFRYQLHCEVKNLSTTFCVIQTLCPPET 119
Query: 115 CRKWNKERHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAILD 174
+WNK + ++ ++ L++R+E+P+ NRWDSPLF + +D I + I
Sbjct: 120 IFEWNKTSNPN---PWEPELLNQLIQRYEEPNSSNRWDSPLFAILTPQDNITDYIDDICK 176
Query: 175 AVAYLTKKVDSKSRD---VKILQ-PTIATQNTRFSEANSLYELDRATQEVINAVVE--AQ 228
V +K + + K LQ P AT S++N + LD T ++I ++
Sbjct: 177 VVFQTSKSAKNSGHNDPLSKGLQKPNSATVLKPASQSNFIQVLDIETSKIIKTIMNHIKS 236
Query: 229 SKALGGPMNG--ISLGQGLPNIS----------ISRSVGLPELRRLRRTFIKLTGQTSLS 276
++GG NG + + +G+ +I+ I V L +L+RL+R FI +
Sbjct: 237 LTSIGGVSNGTRVIVSEGITDINDDGCFFVDLPIGNVVTLAQLQRLKRQFINFNKLRDI- 295
Query: 277 GPPPPSDADSAKRMFVDYLNREL 299
D D +F DYLN+ L
Sbjct: 296 ------DQDRIGPLFADYLNKNL 312
>sp|Q148I5|KTI12_BOVIN Protein KTI12 homolog OS=Bos taurus GN=KTI12 PE=2 SV=1
Length = 354
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 157/362 (43%), Gaps = 70/362 (19%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLR 60
M L+V CG P SGKS L AL E+E + + D A + Y EK LR
Sbjct: 1 MPLVVFCGLPYSGKSRRVEELRAAL-EAEGRAVQVVDDAAVLGAEDATVYGDSAREKALR 59
Query: 61 GVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYC------------ 108
G LR+ V+R +S+ +++I+DSLN IKG+RYEL+CLARAA C++YC
Sbjct: 60 GALRAAVERLLSRQDVVILDSLNYIKGFRYELYCLARAARTPICLVYCVRPGSLSGGLRV 119
Query: 109 -----DLEEDHCRKWNKERHEKGE--AAYDDKIFE-----DLVRRFEK--------PDRR 148
+ + W E G A D + E LV R + P
Sbjct: 120 AGAVDNPNRNVSVSWRPRAEEGGRPLAVGTDVLGEPQAVASLVNRRAQAEVPTESEPKEI 179
Query: 149 NRWDSPLFELCPYKDAIENSSAA-----ILDAVAYLTKKVDSKSR--------------- 188
D P + + E++S A +L+A+A + DS++R
Sbjct: 180 RAADLPALVASESEKSAEHASGAFYPPELLEALALRFEAPDSRNRWDRPLFTLVGLEEPL 239
Query: 189 ----------DVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGPMNG 238
+ + P +TQ+ + + L++LD+ T +V+ ++EAQ A+ G +
Sbjct: 240 PLAEIRAALFENRAPPPHQSTQSQPLASGSFLHQLDQVTSQVLAGLMEAQKSAVPGDL-- 297
Query: 239 ISLGQGLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYLNRE 298
+ L ++ +R + + EL RLRR FI T + + + MF+ YL++
Sbjct: 298 LKLPGTTEHLRFTRPLTMAELSRLRRQFISYTKMHTNN-----ENLPQLANMFLQYLSQS 352
Query: 299 LE 300
L
Sbjct: 353 LH 354
>sp|Q96EK9|KTI12_HUMAN Protein KTI12 homolog OS=Homo sapiens GN=KTI12 PE=1 SV=1
Length = 354
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLR 60
M L+V CG P SGKS A L AL +E + + D A + Y EK LR
Sbjct: 1 MPLVVFCGLPYSGKSRRAEELRVALA-AEGRAVYVVDDAAVLGAEDPAVYGDSAREKALR 59
Query: 61 GVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYC 108
G LR+ V+R +S+ +++I+DSLN IKG+RYEL+CLARAA C++YC
Sbjct: 60 GALRASVERRLSRHDVVILDSLNYIKGFRYELYCLARAARTPLCLVYC 107
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 122 RHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAILDAVAYLTK 181
+H G A Y ++ E L RFE PD RNRWD PLF L ++ + +
Sbjct: 197 KHGSG-AFYSPELLEALTLRFEAPDSRNRWDRPLFTLVGLEEPLPLAG------------ 243
Query: 182 KVDSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGPMNGISL 241
+ S + + P +TQ+ + + L++LD+ T +V+ ++EAQ A+ G + ++L
Sbjct: 244 -IRSALFENRAPPPHQSTQSQPLASGSFLHQLDQVTSQVLAGLMEAQKSAVPGDL--LTL 300
Query: 242 GQGLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYLNRELE 300
++ +R + + EL RLRR FI T P + MF+ YL++ L
Sbjct: 301 PGTTEHLRFTRPLTMAELSRLRRQFISYTKMH-----PNNENLPQLANMFLQYLSQSLH 354
>sp|Q9D1R2|KTI12_MOUSE Protein KTI12 homolog OS=Mus musculus GN=Kti12 PE=1 SV=1
Length = 351
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQS-YASMPAEKNL 59
M L+V+CG PSSGKS L AL SE + V ++D+AS ++ + Y EK L
Sbjct: 1 MPLVVVCGLPSSGKSQRTEELRRALA-SEGR-AVYVVDDASVLGAQDPTVYGDSAGEKAL 58
Query: 60 RGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYC 108
R LR+ V+R +S+ +++I+DS+N IKG+RYEL+CLARAA C+LYC
Sbjct: 59 RAALRAAVERRLSRQDVVILDSVNYIKGFRYELYCLARAARTPLCLLYC 107
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 124 EKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAILDAVAYLTKKV 183
E A+ ++ E L RFE PD RNRWD PLF + ++ + ++
Sbjct: 195 EPASCAFPPEVLESLALRFESPDSRNRWDRPLFTVVGLEEPLP-------------LAEI 241
Query: 184 DSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGPMNGISLGQ 243
S + + P +TQ+ + + L++LD+AT +V+ AV+EAQ A+ G + + L
Sbjct: 242 RSALFENRAPPPHQSTQSQPLASGSFLHQLDQATSQVLTAVMEAQKSAVPG--DFLKLPG 299
Query: 244 GLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYLNRELE 300
+ +R + L EL RLRR FI T P + MF+ YLN+ L
Sbjct: 300 TTEPLRFTRPLTLAELSRLRRQFISYTKMH-----PNNENLPQLANMFLQYLNQSLH 351
>sp|Q5I0L7|KTI12_RAT Protein KTI12 homolog OS=Rattus norvegicus GN=Kti12 PE=2 SV=1
Length = 350
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQS-YASMPAEKNL 59
M L+V+CG PSSGKS L AL + +V ++D+AS ++ + Y EK L
Sbjct: 1 MPLVVVCGLPSSGKSRRTEELRRAL--TGEGRSVYVVDDASVLGAQDSTVYGDSAGEKAL 58
Query: 60 RGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYC 108
R LR+ V+R +S+ +++I+DS+N IKG+RYEL+CLARA C++YC
Sbjct: 59 RAALRAAVERRLSRQDVVILDSMNYIKGFRYELYCLARAVRTPLCLVYC 107
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 124 EKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAILDAVAYLTKKV 183
E A+ ++ E L RFE PD RNRWD PLF + ++ + ++
Sbjct: 194 EPAPCAFPPELLESLALRFEAPDSRNRWDRPLFTVVGLEEPLP-------------LAEI 240
Query: 184 DSKSRDVKILQPTIATQNTRFSEANSLYELDRATQEVINAVVEAQSKALGGPMNGISLGQ 243
S + + P +TQ+ + + L++LD+AT +V+ AV+EAQ A+ G + ++L
Sbjct: 241 RSALFENRAPPPHQSTQSQPLASGSFLHQLDQATSQVLTAVMEAQKSAVPGDL--LTLPG 298
Query: 244 GLPNISISRSVGLPELRRLRRTFIKLTGQTSLSGPPPPSDADSAKRMFVDYLNRELE 300
++ +R + L EL RLRR FI T P + MF+ YLN+ L
Sbjct: 299 TTEHLRFTRPLTLAELSRLRRQFISYTKMH-----PNNENLPQLANMFLQYLNQSLH 350
>sp|Q58933|PSTK_METJA L-seryl-tRNA(Sec) kinase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pstK PE=1 SV=2
Length = 248
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 3 LIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRGV 62
LI++ G P GKS + LA+ L +K + +I S + + E+ ++
Sbjct: 2 LIILTGLPGVGKSTFSKNLAKIL----SKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKS 57
Query: 63 LRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNKER 122
+D S K+ +IVD N R +L +A+ Y ++Y D + N ER
Sbjct: 58 TYRLID-SALKNYWVIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIER 116
Query: 123 HEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAIL 173
EK K++E +F++P ++ +WD P + KD N A L
Sbjct: 117 GEKIPNEVIKKMYE----KFDEPGKKYKWDEPFLIIDTTKDIDFNEIAKKL 163
>sp|Q8BP74|PSTK_MOUSE L-seryl-tRNA(Sec) kinase OS=Mus musculus GN=Pstk PE=1 SV=2
Length = 359
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 70 SVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNKERHEKGEAA 129
+VS+ +++D + RYE++ LAR + +C L+ D + C K N ER +
Sbjct: 142 AVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLKRNGERSQ----P 197
Query: 130 YDDKIFEDLVRRFEKPD-RRNRWDSPLFELCPYKDAIENSSAAILDAVAYLT 180
D+ + + R+ EKP+ +N W+ + I SSA L+A +T
Sbjct: 198 LPDETIQLMGRKIEKPNPEKNAWE--------HNSLIIQSSACSLEASLEVT 241
>sp|Q8TUS5|PSTK_METKA L-seryl-tRNA(Sec) kinase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=pstK PE=3 SV=1
Length = 255
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 1 MALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLR 60
M L+++ G P SGK TC A L +E R+ A D + + + L
Sbjct: 1 MRLLILTGPPGSGK----TCFARELARELRQEGWRV---AHVEADALRGFLWDEFDPKLE 53
Query: 61 GVLRSEVDRSV-----SKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHC 115
V R +SV ++ +++I D N R EL LA + + ++Y D C
Sbjct: 54 QVARELFLKSVETCLDAELDLVIADDTNYYSSMRRELALLALERKVPWGIVYLRTGLDTC 113
Query: 116 RKWNKERHEKGEAAYDDKIFEDLVR----RFEKPDRRNRWD 152
+ N+ER E I E++VR RFE P+ W+
Sbjct: 114 LRRNRERGE--------PIPEEVVRRIYDRFEPPEPDRWWE 146
>sp|Q6LX62|PSTK_METMP L-seryl-tRNA(Sec) kinase OS=Methanococcus maripaludis (strain S2 /
LL) GN=pstK PE=3 SV=1
Length = 255
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 3 LIVICGQPSSGKSLAATCLAEALKESEAKETVRIID--EASFHLDRNQSYASMPAEKNLR 60
LI++ G PS GKS + ++ + E + D SF + + +SY + N
Sbjct: 2 LIILTGLPSVGKSTFSKAFSKKMAEKNIDNIILGTDLIRESFPVWK-ESYEEFIRDSN-N 59
Query: 61 GVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNK 120
+++ ++ S +IVD N R +L +A+ Y +Y + K N
Sbjct: 60 YLIKEALENKFS----VIVDDTNYYNSKRRDLMNIAKECDTNYVTIYLKAPLNLLLKRNI 115
Query: 121 ERHEKGEAAYDDKIFEDLVRRFEKPDRRNRWDSP 154
ER +K +++ +++ +F+ P + WD P
Sbjct: 116 ERGQK----IPNEVIKNMYEKFDTPGTKYAWDLP 145
>sp|B5RBW3|URK_SALG2 Uridine kinase OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=udk PE=3 SV=1
Length = 213
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEE------ 60
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
++++ D + D+ ++ L ++K
Sbjct: 61 LVKTNYDHPNAMDHSLLFQHLQALK 85
>sp|Q8IV42|PSTK_HUMAN L-seryl-tRNA(Sec) kinase OS=Homo sapiens GN=PSTK PE=2 SV=2
Length = 348
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 70 SVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLEEDHCRKWNKERHEKGEAA 129
+VS+ +++D + RYE++ LAR + +C L+ D + C + N +R + A
Sbjct: 141 AVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLQRNGQRPQ----A 196
Query: 130 YDDKIFEDLVRRFEKPD-RRNRWD 152
+ + R+ EKP+ +N W+
Sbjct: 197 LPPETIHLMGRKLEKPNPEKNAWE 220
>sp|A1JTX4|URK_YERE8 Uridine kinase OS=Yersinia enterocolitica serotype O:8 / biotype
1B (strain 8081) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L S+K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQSLKA 86
>sp|A6TBG6|URK_KLEP7 Uridine kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain
ATCC 700721 / MGH 78578) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
++ I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D S D+ ++ L +K
Sbjct: 62 -VKTNYDHPSSMDHSLLFQHLQMLK 85
>sp|B5XPC8|URK_KLEP3 Uridine kinase OS=Klebsiella pneumoniae (strain 342) GN=udk PE=3
SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
++ I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D S D+ ++ L +K
Sbjct: 62 -VKTNYDHPSSMDHSLLFQHLQMLK 85
>sp|P67408|URK_SALTY Uridine kinase OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|P67409|URK_SALTI Uridine kinase OS=Salmonella typhi GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B4TNH9|URK_SALSV Uridine kinase OS=Salmonella schwarzengrund (strain CVM19633)
GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|C0Q1G0|URK_SALPC Uridine kinase OS=Salmonella paratyphi C (strain RKS4594) GN=udk
PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|A9N7M0|URK_SALPB Uridine kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 /
SPB7) GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B4T9T4|URK_SALHS Uridine kinase OS=Salmonella heidelberg (strain SL476) GN=udk
PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B5R0B5|URK_SALEP Uridine kinase OS=Salmonella enteritidis PT4 (strain P125109)
GN=udk PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B5FMU1|URK_SALDC Uridine kinase OS=Salmonella dublin (strain CT_02021853) GN=udk
PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|Q57MN1|URK_SALCH Uridine kinase OS=Salmonella choleraesuis (strain SC-B67) GN=udk
PE=3 SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B5EXV0|URK_SALA4 Uridine kinase OS=Salmonella agona (strain SL483) GN=udk PE=3
SV=1
Length = 213
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|B5BF73|URK_SALPK Uridine kinase OS=Salmonella paratyphi A (strain AKU_12601)
GN=udk PE=3 SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|Q5PDX6|URK_SALPA Uridine kinase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=udk PE=3 SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L ++K
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQALK 85
>sp|A7MHG8|URK_CROS8 Uridine kinase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=udk PE=3 SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASM 53
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSM 58
>sp|B4SXV3|URK_SALNS Uridine kinase OS=Salmonella newport (strain SL254) GN=udk PE=3
SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASM 53
+I I G +SGKSL A+ L L+E E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYY--KDQSHLSM 58
>sp|B7LV30|URK_ESCF3 Uridine kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHSLLLEHLQALK 85
>sp|P0A8F7|URK_SHIFL Uridine kinase OS=Shigella flexneri GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHSLLLEHLQALK 85
>sp|P0A8F4|URK_ECOLI Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHSLLLEHLQALK 85
>sp|P0A8F5|URK_ECOL6 Uridine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHSLLLEHLQALK 85
>sp|P0A8F6|URK_ECO57 Uridine kinase OS=Escherichia coli O157:H7 GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E E + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHSLLLEHLQALK 85
>sp|B1JPY6|URK_YERPY Uridine kinase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|Q66C70|URK_YERPS Uridine kinase OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|A4TKM7|URK_YERPP Uridine kinase OS=Yersinia pestis (strain Pestoides F) GN=udk
PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|Q1CGU6|URK_YERPN Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|A9R2M5|URK_YERPG Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|Q8ZFZ9|URK_YERPE Uridine kinase OS=Yersinia pestis GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|B2JZK5|URK_YERPB Uridine kinase OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|Q1C9T6|URK_YERPA Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|A7FJJ4|URK_YERP3 Uridine kinase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=udk PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L+E + + +I E ++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELREQVGDQHIGVIPEDGYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIKG 87
+++ D + D+ ++++ L ++K
Sbjct: 62 -VKTNYDHPSAMDHNLLLEHLQALKA 86
>sp|P75167|GPMI_MYCPN 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129)
GN=gpmI PE=3 SV=1
Length = 508
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 130 YDDKIFEDLVRRFEKPDRRNRWDSPLFELCPYKDAIENSSAAILDAVAYLTKKVDSKSRD 189
Y + I L R+ DR RWD E Y + NS A+ D VAY+ D K D
Sbjct: 171 YHNVIIGTLGGRYYGMDRDQRWDR---EEIAYNAILGNSKASFTDPVAYVQSAYDQKVTD 227
Query: 190 VKILQPTI 197
+ L P +
Sbjct: 228 -EFLYPAV 234
>sp|A4WCB6|URK_ENT38 Uridine kinase OS=Enterobacter sp. (strain 638) GN=udk PE=3 SV=1
Length = 213
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 2 ALIVICGQPSSGKSLAATCLAEALKESEAKETVRIIDEASFHLDRNQSYASMPAEKNLRG 61
+I I G +SGKSL A+ L L++ E + +I E S++ ++QS+ SM
Sbjct: 9 VIIGIAGASASGKSLIASTLYRELRDQVGDEHIGVIPEDSYY--KDQSHLSMEER----- 61
Query: 62 VLRSEVDRSVSKDNIIIVDSLNSIK 86
+++ D + D+ ++ L IK
Sbjct: 62 -VKTNYDHPNAMDHSLLFQHLQMIK 85
>sp|Q8FVW4|AHPD_BRUSU Alkyl hydroperoxide reductase AhpD OS=Brucella suis biovar 1
(strain 1330) GN=ahpD PE=3 SV=1
Length = 175
Score = 34.7 bits (78), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 30/128 (23%)
Query: 3 LIVICGQPSSGKSLAATCLAEA--------LKESEAKETVRIIDEASF---HLDRNQSYA 51
L V CG S + +AEA ++ ++A ++ ++ + HL N+ Y
Sbjct: 38 LFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYR 97
Query: 52 SMPAEKNLRGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLE 111
+MPA + + VD+ VD +ELW LA +A I C + D
Sbjct: 98 TMPARLRMNVISNPGVDK---------VD---------FELWSLAVSA-INGCGMCIDAH 138
Query: 112 EDHCRKWN 119
ED RK N
Sbjct: 139 EDVLRKAN 146
>sp|A9MBZ4|AHPD_BRUC2 Alkyl hydroperoxide reductase AhpD OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=ahpD PE=3 SV=1
Length = 175
Score = 34.7 bits (78), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 30/128 (23%)
Query: 3 LIVICGQPSSGKSLAATCLAEA--------LKESEAKETVRIIDEASF---HLDRNQSYA 51
L V CG S + +AEA ++ ++A ++ ++ + HL N+ Y
Sbjct: 38 LFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYR 97
Query: 52 SMPAEKNLRGVLRSEVDRSVSKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYCDLE 111
+MPA + + VD+ VD +ELW LA +A I C + D
Sbjct: 98 TMPARLRMNVISNPGVDK---------VD---------FELWSLAVSA-INGCGMCIDAH 138
Query: 112 EDHCRKWN 119
ED RK N
Sbjct: 139 EDVLRKAN 146
>sp|Q6NXA4|ILF3_DANRE Interleukin enhancer-binding factor 3 homolog OS=Danio rerio
GN=ilf3 PE=1 SV=2
Length = 833
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 62 VLRSEVDRSVSKDNIIIVDS---------LNSIKGYRYELWCLARAAGIRYCVLYCDLEE 112
++R EV++ + + + ++D L ++ R+ W ARA G+R CV+ +
Sbjct: 177 LVREEVEKQAAGETLSVIDPPDVLDRQKCLTALASLRHAKWFQARANGLRSCVIVIRILR 236
Query: 113 DHC 115
D C
Sbjct: 237 DLC 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,810,731
Number of Sequences: 539616
Number of extensions: 4383028
Number of successful extensions: 14800
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 14721
Number of HSP's gapped (non-prelim): 121
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)